1092
10000
1 27488867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7168;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27489006 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27489148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.8874;ERATE=0.0004;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27489149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0139;AVGPOST=0.9984;RSQ=0.9489;ERATE=0.0008;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27489150 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4671;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27489531 . AC A 28 PASS INDEL;BAVGPOST=0.998;BRSQ=0.612;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6171;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27489565 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0127;AVGPOST=0.9991;RSQ=0.9696;ERATE=0.0003;THETA=0.0018;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27489642 rs34304194 A AT 57862 PASS INDEL;BAVGPOST=0.985;BRSQ=0.971;LDAF=0.5675;AVGPOST=0.9702;RSQ=0.9540;ERATE=0.0055;THETA=0.0008;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 27489657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0448;AVGPOST=0.9938;RSQ=0.9482;ERATE=0.0008;THETA=0.0015;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 27489678 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0068;AVGPOST=0.9958;RSQ=0.7949;ERATE=0.0005;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27489706 . A ACG 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.3377;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27489711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0213;AVGPOST=0.9988;RSQ=0.9780;ERATE=0.0004;THETA=0.0011;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27489734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0113;AVGPOST=0.9973;RSQ=0.9027;ERATE=0.0005;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27489740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0210;AVGPOST=0.9934;RSQ=0.8848;ERATE=0.0006;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 27489751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0181;AVGPOST=0.9979;RSQ=0.9564;ERATE=0.0006;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27489758 . ATC A 137 PASS INDEL;BAVGPOST=0.994;BRSQ=0.547;LDAF=0.0119;AVGPOST=0.9938;RSQ=0.8093;ERATE=0.0009;THETA=0.0016;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27489790 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.925;LDAF=0.5456;AVGPOST=0.9300;RSQ=0.8935;ERATE=0.0120;THETA=0.0009;AC=1191;AN=2184 GT:DS:GL:BD 0.54532969 1
1 27489796 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.769;LDAF=0.0070;AVGPOST=0.9952;RSQ=0.7211;ERATE=0.0008;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27489803 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0047;AVGPOST=0.9966;RSQ=0.6842;ERATE=0.0006;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27489806 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.856;LDAF=0.0296;AVGPOST=0.9781;RSQ=0.7073;ERATE=0.0043;THETA=0.0023;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27489808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0314;AVGPOST=0.9991;RSQ=0.9887;ERATE=0.0004;THETA=0.0011;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 27489836 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0105;AVGPOST=0.9985;RSQ=0.9419;ERATE=0.0005;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27489934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.4259;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27489986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.3202;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27490306 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5107;AVGPOST=0.9912;RSQ=0.9889;ERATE=0.0004;THETA=0.0016;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 27490326 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0059;AVGPOST=0.9948;RSQ=0.6514;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27490407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4927;ERATE=0.0009;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27490482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8514;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27490496 . AAAT A 170 PASS INDEL;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9529;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27490602 rs66460661 TAC T 839 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0106;AVGPOST=0.9989;RSQ=0.9560;ERATE=0.0005;THETA=0.0021;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27490625 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8442;ERATE=0.0004;THETA=0.0044;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27490637 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0162;AVGPOST=0.9947;RSQ=0.8800;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27490649 rs112837469 AC A 1761 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0174;AVGPOST=0.9996;RSQ=0.9905;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27490751 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27490755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0301;AVGPOST=0.9971;RSQ=0.9660;ERATE=0.0007;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27490901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.681;LDAF=0.0048;AVGPOST=0.9963;RSQ=0.6495;ERATE=0.0011;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27490989 . TC T 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7479;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27490999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0005;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27491046 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5001;AVGPOST=0.9940;RSQ=0.9913;ERATE=0.0003;THETA=0.0044;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 27491132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9717;ERATE=0.0003;THETA=0.0037;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27491197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7673;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27491207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4757;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27491219 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0122;AVGPOST=0.9994;RSQ=0.9757;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27491277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.882;LDAF=0.0116;AVGPOST=0.9965;RSQ=0.8840;ERATE=0.0007;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27491322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9630;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27491380 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0308;AVGPOST=0.9986;RSQ=0.9832;ERATE=0.0004;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27491436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0095;AVGPOST=0.9982;RSQ=0.9245;ERATE=0.0005;THETA=0.0025;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27491465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.933;LDAF=0.4878;AVGPOST=0.9685;RSQ=0.9600;ERATE=0.0005;THETA=0.0007;AC=1074;AN=2184 GT:DS:GL:BD 0.49175823 0
1 27491600 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.933;LDAF=0.4884;AVGPOST=0.9691;RSQ=0.9602;ERATE=0.0005;THETA=0.0030;AC=1075;AN=2184 GT:DS:GL:BD 0.49221611 0
1 27491601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6445;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27491764 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4600;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27491980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.8039;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27492110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6939;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27492254 . CAT C 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27492290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9459;ERATE=0.0004;THETA=0.0022;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27492319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3974;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27492320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0175;AVGPOST=0.9992;RSQ=0.9825;ERATE=0.0004;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27492406 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.869;LDAF=0.0137;AVGPOST=0.9975;RSQ=0.9287;ERATE=0.0004;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27492477 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8695;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27492716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0063;AVGPOST=0.9911;RSQ=0.4423;ERATE=0.0010;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27492826 . TGCAGCAGCCGGGCCGCTTCCCG T 359 PASS INDEL;BAVGPOST=0.999;BRSQ=0.463;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.4238;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27492831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.548;LDAF=0.0049;AVGPOST=0.9920;RSQ=0.3636;ERATE=0.0008;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27492864 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.5090;AVGPOST=0.9345;RSQ=0.9104;ERATE=0.0071;THETA=0.0030;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 27493174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9956;AVGPOST=0.9924;RSQ=0.2996;ERATE=0.0007;THETA=0.0008;AC=2180;AN=2184 GT:DS:GL:BD 0.99816847 1
1 27493224 rs10536649 GGC G 6791 PASS INDEL;BAVGPOST=0.882;BRSQ=0.809;LDAF=0.4883;AVGPOST=0.8646;RSQ=0.8047;ERATE=0.0091;THETA=0.0007;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 27493234 . GCT G 1141 PASS INDEL;BAVGPOST=0.825;BRSQ=0.716;LDAF=0.4631;AVGPOST=0.8351;RSQ=0.7618;ERATE=0.0096;THETA=0.0021;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 27493241 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.968;LDAF=0.3819;AVGPOST=0.9713;RSQ=0.9577;ERATE=0.0012;THETA=0.0024;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 27493347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8849;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27493431 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0102;AVGPOST=0.9955;RSQ=0.8281;ERATE=0.0005;THETA=0.0017;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27493442 . TCTCCC T 1466 PASS INDEL;BAVGPOST=0.482;BRSQ=0.060;LDAF=0.2763;AVGPOST=0.6841;RSQ=0.3395;ERATE=0.0094;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 27493648 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.398;LDAF=0.0406;AVGPOST=0.9649;RSQ=0.6552;ERATE=0.0017;THETA=0.0008;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 27493672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.837;LDAF=0.4860;AVGPOST=0.8562;RSQ=0.7890;ERATE=0.0144;THETA=0.0007;AC=1072;AN=2184 GT:DS:GL:BD 0.49084249 0
1 27493677 . CT C 801 PASS INDEL;BAVGPOST=0.738;BRSQ=0.549;LDAF=0.4120;AVGPOST=0.7068;RSQ=0.5314;ERATE=0.0196;THETA=0.0043;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 27493769 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.971;LDAF=0.5546;AVGPOST=0.9300;RSQ=0.9004;ERATE=0.0071;THETA=0.0005;AC=1219;AN=2184 GT:DS:GL:BD 0.55815017 1
1 27493799 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0099;AVGPOST=0.9926;RSQ=0.7032;ERATE=0.0009;THETA=0.0045;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27493825 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.520;LDAF=0.0048;AVGPOST=0.9924;RSQ=0.3321;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27493861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0127;AVGPOST=0.9936;RSQ=0.8127;ERATE=0.0009;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27493925 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.689;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8358;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27493956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.689;LDAF=0.0089;AVGPOST=0.9957;RSQ=0.7985;ERATE=0.0008;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27493957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.3978;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27494001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0079;AVGPOST=0.9994;RSQ=0.9678;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27494147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0083;AVGPOST=0.9984;RSQ=0.9237;ERATE=0.0006;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27494249 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.695;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9340;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27494325 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5893;AVGPOST=0.9942;RSQ=0.9909;ERATE=0.0005;THETA=0.0082;AC=1289;AN=2184 GT:DS:GL:BD 0.59020144 1
1 27494368 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5849;AVGPOST=0.9963;RSQ=0.9946;ERATE=0.0006;THETA=0.0004;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 27494500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27494598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0841;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 27494722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0843;AVGPOST=0.9994;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 27494810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6150;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27494886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4706;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27494888 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9665;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27494897 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0841;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 27494997 . GT G 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6872;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27495297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6854;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27495497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8291;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27495501 . G GA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4588;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27495519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27495547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0340;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 27495756 . C CA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27495945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5118;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27495978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9243;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27496007 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27496128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6421;ERATE=0.0003;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27496132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8773;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27496182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0249;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0003;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 27496372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2421;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 27496848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0511;AVGPOST=0.9987;RSQ=0.9880;ERATE=0.0005;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 27497096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6802;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27497111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27497238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7772;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27497342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27497362 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0338;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 27497368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6669;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27497435 . AT A 1517 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0225;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0003;THETA=0.0011;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27497615 . T TC 19 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7141;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27497680 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27497688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7875;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27497782 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3155;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0005;THETA=0.0002;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 27497802 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4347;AVGPOST=0.9963;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 27497812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27497936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.858;LDAF=0.0196;AVGPOST=0.9952;RSQ=0.9044;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 27498000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2166;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0006;THETA=0.0004;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 27498022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8215;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27498075 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0344;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 27498077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0250;AVGPOST=0.9993;RSQ=0.9875;ERATE=0.0003;THETA=0.0023;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 27498078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27498273 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5914;AVGPOST=0.9965;RSQ=0.9946;ERATE=0.0007;THETA=0.0003;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 27498287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1125;AVGPOST=0.9941;RSQ=0.9757;ERATE=0.0006;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 27498372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8699;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27498450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27498457 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8977;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27498517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0281;AVGPOST=0.9918;RSQ=0.8972;ERATE=0.0011;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27498535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.599;LDAF=0.0100;AVGPOST=0.9895;RSQ=0.5877;ERATE=0.0008;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27498564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.750;LDAF=0.0263;AVGPOST=0.9793;RSQ=0.6972;ERATE=0.0034;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27498569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5624;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27498578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.710;LDAF=0.0133;AVGPOST=0.9925;RSQ=0.7802;ERATE=0.0005;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27498579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0519;AVGPOST=0.9966;RSQ=0.9716;ERATE=0.0004;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 27498611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.274;LDAF=0.0164;AVGPOST=0.9749;RSQ=0.4111;ERATE=0.0020;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27498690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.911;LDAF=0.0529;AVGPOST=0.9958;RSQ=0.9641;ERATE=0.0009;THETA=0.0004;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 27498694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.560;LDAF=0.0129;AVGPOST=0.9897;RSQ=0.6771;ERATE=0.0009;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27498711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.627;LDAF=0.0066;AVGPOST=0.9920;RSQ=0.5455;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27498729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.5005;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27498753 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4924;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27498940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9232;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27499048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7557;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27499055 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3406;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 27499072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.5898;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27499107 . AC A 100 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9222;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27499121 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.9090;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27499386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27499572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6277;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27499704 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0654;AVGPOST=0.9971;RSQ=0.9830;ERATE=0.0005;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 27499723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0642;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 27499744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.9059;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27499766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7885;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27499805 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0093;AVGPOST=0.9988;RSQ=0.9513;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27499905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0492;AVGPOST=0.9983;RSQ=0.9877;ERATE=0.0003;THETA=0.0023;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 27499933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0295;AVGPOST=0.9967;RSQ=0.9552;ERATE=0.0005;THETA=0.0021;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27499949 . GTGTATA G 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6917;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27499962 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0073;AVGPOST=0.9980;RSQ=0.8810;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27499987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0650;AVGPOST=0.9983;RSQ=0.9904;ERATE=0.0003;THETA=0.0018;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 27500047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6853;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27500104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.8955;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27500232 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9858;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27500288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8486;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27500321 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9776;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27500334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9992;RSQ=0.9364;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27500344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0747;AVGPOST=0.9973;RSQ=0.9839;ERATE=0.0006;THETA=0.0010;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 27500449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7520;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27500463 rs56944521 GC G 161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9974;RSQ=0.8202;ERATE=0.0005;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27500479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3687;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27500579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0034;AVGPOST=0.9959;RSQ=0.4972;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27500589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0132;AVGPOST=0.9984;RSQ=0.9504;ERATE=0.0005;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27500612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.955;LDAF=0.0844;AVGPOST=0.9882;RSQ=0.9445;ERATE=0.0024;THETA=0.0024;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 27500640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.523;LDAF=0.0054;AVGPOST=0.9936;RSQ=0.5606;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27500656 . TCCACACAGGAGGG T 4854 PASS INDEL;BAVGPOST=0.983;BRSQ=0.811;LDAF=0.0470;AVGPOST=0.9823;RSQ=0.8542;ERATE=0.0009;THETA=0.0012;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 27500739 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0087;AVGPOST=0.9962;RSQ=0.8433;ERATE=0.0006;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27500758 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7301;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27500897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0770;AVGPOST=0.9981;RSQ=0.9898;ERATE=0.0005;THETA=0.0005;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 27500987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27500992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.953;LDAF=0.1254;AVGPOST=0.9903;RSQ=0.9671;ERATE=0.0010;THETA=0.0004;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 27501029 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.7963;ERATE=0.0003;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27501034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0181;AVGPOST=0.9988;RSQ=0.9731;ERATE=0.0003;THETA=0.0026;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27501074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27501189 . ACT A 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.8812;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27501260 . CTG C 591 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27501261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0441;AVGPOST=0.9991;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 27501277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0004;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27501282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.5838;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27501347 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7528;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27501407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0226;AVGPOST=0.9984;RSQ=0.9734;ERATE=0.0003;THETA=0.0016;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 27501434 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0742;AVGPOST=0.9984;RSQ=0.9921;ERATE=0.0004;THETA=0.0008;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 27501473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0747;AVGPOST=0.9990;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 27501508 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0750;AVGPOST=0.9985;RSQ=0.9922;ERATE=0.0003;THETA=0.0005;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 27501511 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27501535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.755;LDAF=0.0061;AVGPOST=0.9953;RSQ=0.7164;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27501592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.958;LDAF=0.0541;AVGPOST=0.9962;RSQ=0.9694;ERATE=0.0009;THETA=0.0014;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 27501617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0237;AVGPOST=0.9978;RSQ=0.9587;ERATE=0.0006;THETA=0.0018;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 27501636 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8854;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27501663 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.613;LDAF=0.0091;AVGPOST=0.9909;RSQ=0.5773;ERATE=0.0009;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27501705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0091;AVGPOST=0.9978;RSQ=0.8905;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27501706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0141;AVGPOST=0.9953;RSQ=0.8615;ERATE=0.0008;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27501723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0221;AVGPOST=0.9994;RSQ=0.9872;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 27501762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.899;LDAF=0.1056;AVGPOST=0.9854;RSQ=0.9470;ERATE=0.0005;THETA=0.0007;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 27501779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.980;LDAF=0.3994;AVGPOST=0.9893;RSQ=0.9862;ERATE=0.0005;THETA=0.0016;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 27501784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.900;LDAF=0.1080;AVGPOST=0.9868;RSQ=0.9523;ERATE=0.0005;THETA=0.0006;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 27501787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.952;LDAF=0.0744;AVGPOST=0.9919;RSQ=0.9559;ERATE=0.0009;THETA=0.0005;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 27501851 . A AAG 816 PASS INDEL;BAVGPOST=0.987;BRSQ=0.902;LDAF=0.0645;AVGPOST=0.9921;RSQ=0.9540;ERATE=0.0004;THETA=0.0012;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 27501859 rs112857278 A AG 1507 PASS INDEL;BAVGPOST=0.986;BRSQ=0.899;LDAF=0.0655;AVGPOST=0.9925;RSQ=0.9535;ERATE=0.0004;THETA=0.0008;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 27501860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9590;ERATE=0.0003;THETA=0.0054;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27501931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9546;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27501947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0751;AVGPOST=0.9989;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 27501949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27501977 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9641;ERATE=0.0003;THETA=0.0041;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27502031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0142;AVGPOST=0.9990;RSQ=0.9749;ERATE=0.0003;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27502048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9269;ERATE=0.0003;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27502188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27502223 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1809;AVGPOST=0.9979;RSQ=0.9944;ERATE=0.0004;THETA=0.0010;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 27502273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4211;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27502281 rs113642527 GC G 5578 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0771;AVGPOST=0.9978;RSQ=0.9881;ERATE=0.0005;THETA=0.0006;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 27502296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0763;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0011;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 27502318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0549;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0009;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 27502360 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0127;AVGPOST=0.9994;RSQ=0.9837;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27502610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0548;AVGPOST=0.9990;RSQ=0.9920;ERATE=0.0004;THETA=0.0004;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 27502612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27502623 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8926;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27502661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4054;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0006;THETA=0.0010;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 27502819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0250;AVGPOST=0.9982;RSQ=0.9675;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 27502834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7686;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27502835 rs59560957 AGGAGG A 32954 PASS INDEL;BAVGPOST=0.983;BRSQ=0.974;LDAF=0.3999;AVGPOST=0.9937;RSQ=0.9917;ERATE=0.0007;THETA=0.0006;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 27502875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27502920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0573;AVGPOST=0.9957;RSQ=0.9650;ERATE=0.0009;THETA=0.0005;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 27502990 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8990;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27503007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.505;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5432;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27503029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7536;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27503061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9840;ERATE=0.0003;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27503081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1485;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0004;THETA=0.0013;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 27503106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1329;AVGPOST=0.9982;RSQ=0.9937;ERATE=0.0003;THETA=0.0006;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 27503137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3746;AVGPOST=0.9970;RSQ=0.9958;ERATE=0.0010;THETA=0.0007;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 27503166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0288;AVGPOST=0.9970;RSQ=0.9563;ERATE=0.0006;THETA=0.0010;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27503266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27503276 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0819;AVGPOST=0.9966;RSQ=0.9856;ERATE=0.0005;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 27503363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4435;AVGPOST=0.9932;RSQ=0.9922;ERATE=0.0010;THETA=0.0005;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 27503393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0553;AVGPOST=0.9986;RSQ=0.9876;ERATE=0.0004;THETA=0.0012;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 27503419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0211;AVGPOST=0.9956;RSQ=0.9153;ERATE=0.0006;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 27503453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9795;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27503505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.4793;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27503536 . T TG 1866 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0229;AVGPOST=0.9959;RSQ=0.9256;ERATE=0.0004;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 27503791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.881;LDAF=0.2064;AVGPOST=0.9475;RSQ=0.8502;ERATE=0.0268;THETA=0.0005;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 27503834 rs113421831 G GC 12378 PASS INDEL;BAVGPOST=0.963;BRSQ=0.853;LDAF=0.1995;AVGPOST=0.9207;RSQ=0.7739;ERATE=0.0270;THETA=0.0007;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 27503841 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27503860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3397;AVGPOST=0.9946;RSQ=0.9921;ERATE=0.0017;THETA=0.0004;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 27503884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0054;AVGPOST=0.9968;RSQ=0.7748;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27503912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27503927 . GT G 475 PASS INDEL;BAVGPOST=0.904;BRSQ=0.561;LDAF=0.0977;AVGPOST=0.9240;RSQ=0.7046;ERATE=0.0026;THETA=0.0005;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 27503975 rs34025098 TC T 13372 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2092;AVGPOST=0.9930;RSQ=0.9844;ERATE=0.0008;THETA=0.0008;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 27503978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9994;RSQ=0.9725;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27504100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.655;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8149;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27504119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8104;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27504141 . T TC 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7990;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27504144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9837;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27504184 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9118;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27504237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6758;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27504238 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5381;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27504253 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7444;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27504278 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0159;AVGPOST=0.9993;RSQ=0.9802;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27504305 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.797;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8375;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27504327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27504346 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27504365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3210;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0006;THETA=0.0007;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 27504367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0214;AVGPOST=0.9991;RSQ=0.9837;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27504368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6610;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27504394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9777;ERATE=0.0003;THETA=0.0011;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27504406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9774;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27504427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9466;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27504509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3009;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 27504520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27504531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7679;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27504553 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27504807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5892;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27504882 . TTGTCCCAC T 704 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27504966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27504988 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27505005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.976;LDAF=0.4242;AVGPOST=0.9819;RSQ=0.9764;ERATE=0.0008;THETA=0.0008;AC=928;AN=2184 GT:DS:GL:BD 0.42490843 0
1 27505020 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27505071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9548;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27505099 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9360;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27505106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0095;AVGPOST=0.9985;RSQ=0.9370;ERATE=0.0005;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27505117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27505169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8559;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27505177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0481;AVGPOST=0.9969;RSQ=0.9740;ERATE=0.0006;THETA=0.0008;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27505315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0471;AVGPOST=0.9970;RSQ=0.9760;ERATE=0.0005;THETA=0.0007;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 27505324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27505519 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8865;ERATE=0.0003;THETA=0.0056;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27505526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7286;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27505777 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27505814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9668;ERATE=0.0003;THETA=0.0063;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27505982 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2777;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0005;THETA=0.0059;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 27506122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7553;ERATE=0.0005;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27506294 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5854;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27506590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0014;AVGPOST=0.9976;RSQ=0.4276;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27506642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8715;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27506742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3013;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0005;THETA=0.0007;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 27506753 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3010;AVGPOST=0.9977;RSQ=0.9966;ERATE=0.0003;THETA=0.0009;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 27506812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0005;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27506853 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0308;AVGPOST=0.9986;RSQ=0.9822;ERATE=0.0004;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 27506994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27507058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0028;AVGPOST=0.9965;RSQ=0.5422;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27507101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3006;AVGPOST=0.9953;RSQ=0.9929;ERATE=0.0007;THETA=0.0003;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 27507123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.790;LDAF=0.0433;AVGPOST=0.9777;RSQ=0.7926;ERATE=0.0012;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 27507140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6489;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27507194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3099;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0008;THETA=0.0006;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 27507415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6340;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27507481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0766;AVGPOST=0.9958;RSQ=0.9834;ERATE=0.0006;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 27507522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9864;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27507570 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3089;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 27507725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27507906 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6866;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27507930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8304;ERATE=0.0005;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27507994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0094;AVGPOST=0.9965;RSQ=0.8681;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27508064 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.6880;ERATE=0.0008;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27508162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0219;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 27508483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8907;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27508490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.651;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5399;ERATE=0.0006;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27508499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0303;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0004;THETA=0.0033;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27508501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8649;ERATE=0.0004;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27508510 . ACTAT A 1908 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0107;AVGPOST=0.9984;RSQ=0.9364;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27508543 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1035;AVGPOST=0.9974;RSQ=0.9897;ERATE=0.0005;THETA=0.0007;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 27508710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5637;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27508751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0140;AVGPOST=0.9988;RSQ=0.9740;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27508838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27509186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27509191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9871;ERATE=0.0003;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27509197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6873;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27509266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1360;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0004;THETA=0.0028;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 27509292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9992;RSQ=0.9640;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27509301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.822;LDAF=0.0067;AVGPOST=0.9971;RSQ=0.8570;ERATE=0.0008;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27509385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8747;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27509389 . G GTTTTACCTT 5763 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0133;AVGPOST=0.9985;RSQ=0.9557;ERATE=0.0003;THETA=0.0031;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27509485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.830;LDAF=0.9916;AVGPOST=0.9959;RSQ=0.8163;ERATE=0.0004;THETA=0.0010;AC=2168;AN=2184 GT:DS:GL:BD 0.99267399 1
1 27509618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9992;RSQ=0.9505;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27509626 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27509713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5319;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27509747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3010;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 27509781 . AT A 18 PASS INDEL;BAVGPOST=0.437;BRSQ=0.003;LDAF=0.2084;AVGPOST=0.6474;RSQ=0.0722;ERATE=0.0145;THETA=0.0115;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27514118 . AATAT A 102 PASS INDEL;BAVGPOST=0.727;BRSQ=0.031;LDAF=0.0949;AVGPOST=0.8322;RSQ=0.1379;ERATE=0.0058;THETA=0.0158;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27515143 . ATATT A 767 PASS INDEL;BAVGPOST=0.638;BRSQ=0.028;LDAF=0.1893;AVGPOST=0.6848;RSQ=0.1124;ERATE=0.0138;THETA=0.0152;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27515144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.540;LDAF=0.0029;AVGPOST=0.9952;RSQ=0.2299;ERATE=0.0009;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27518307 . AG A 1089 PASS INDEL;BAVGPOST=0.838;BRSQ=0.163;LDAF=0.0941;AVGPOST=0.8587;RSQ=0.2943;ERATE=0.0096;THETA=0.0177;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27520808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.694;LDAF=0.1242;AVGPOST=0.9359;RSQ=0.7444;ERATE=0.0027;THETA=0.0060;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 27521104 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.567;LDAF=0.0334;AVGPOST=0.9743;RSQ=0.6863;ERATE=0.0023;THETA=0.0088;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 27521121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.2814;ERATE=0.0006;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27521681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.686;LDAF=0.1378;AVGPOST=0.9248;RSQ=0.7183;ERATE=0.0063;THETA=0.0253;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 27521767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.573;LDAF=0.0358;AVGPOST=0.9654;RSQ=0.5786;ERATE=0.0055;THETA=0.0081;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27522209 . GCAAA G 492 PASS INDEL;BAVGPOST=0.986;BRSQ=0.385;LDAF=0.0152;AVGPOST=0.9792;RSQ=0.3725;ERATE=0.0041;THETA=0.0189;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27522331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0119;AVGPOST=0.9993;RSQ=0.9725;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27522413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.439;LDAF=0.0161;AVGPOST=0.9759;RSQ=0.4238;ERATE=0.0028;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27522517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6359;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27522618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.653;LDAF=0.0037;AVGPOST=0.9965;RSQ=0.6423;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27522764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0254;AVGPOST=0.9938;RSQ=0.9112;ERATE=0.0004;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27522790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.633;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7278;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27522857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4171;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27522859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3772;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27522950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27523151 . AC A 4433 PASS INDEL;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0337;AVGPOST=0.9962;RSQ=0.9532;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 27523170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9105;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27523284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27523331 . ATTT A 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27523378 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9877;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27523394 . TTTTG T 273 PASS INDEL;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0057;AVGPOST=0.9965;RSQ=0.7411;ERATE=0.0023;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27523414 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.5665;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27523493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0164;AVGPOST=0.9933;RSQ=0.8417;ERATE=0.0005;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27523496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.970;LDAF=0.3902;AVGPOST=0.9813;RSQ=0.9684;ERATE=0.0020;THETA=0.0005;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 27523602 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0032;AVGPOST=0.9958;RSQ=0.4928;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27523672 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.8063;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27523676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0088;AVGPOST=0.9980;RSQ=0.9117;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27523677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9985;RSQ=0.9616;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27523750 . TG T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6793;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27523755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27523848 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7798;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27523858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27524074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7263;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27524217 . TC T 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4144;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27524265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27524316 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9875;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27524323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8084;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27524361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27524374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5107;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27524427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7123;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27524501 . CA C 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4939;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27524512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0078;AVGPOST=0.9985;RSQ=0.9178;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27524545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27524595 . C CCT 622 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9099;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27524639 . A AT 341 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8821;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27524640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5102;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27524737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7683;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27524777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27524813 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27524850 . C CA 278 PASS INDEL;BAVGPOST=0.970;BRSQ=0.496;LDAF=0.0654;AVGPOST=0.9149;RSQ=0.4414;ERATE=0.0159;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 27524855 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.948;LDAF=0.5987;AVGPOST=0.9606;RSQ=0.9392;ERATE=0.0054;THETA=0.0005;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 27524863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3366;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27524869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.964;LDAF=0.1415;AVGPOST=0.9887;RSQ=0.9636;ERATE=0.0004;THETA=0.0006;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 27524872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9610;ERATE=0.0005;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27524900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0043;AVGPOST=0.9967;RSQ=0.6544;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27524947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4595;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27525051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0035;AVGPOST=0.9939;RSQ=0.2555;ERATE=0.0009;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27525072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0041;AVGPOST=0.9926;RSQ=0.2500;ERATE=0.0010;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27525141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5492;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27525159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.721;LDAF=0.0120;AVGPOST=0.9950;RSQ=0.8570;ERATE=0.0006;THETA=0.0017;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27525235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8047;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27525409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9615;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27525668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0040;AVGPOST=0.9962;RSQ=0.5824;ERATE=0.0008;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27525698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0100;AVGPOST=0.9969;RSQ=0.8681;ERATE=0.0006;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27525733 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4866;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27525757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9897;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27525819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27525836 . C CAT 17945 PASS INDEL;BAVGPOST=0.936;BRSQ=0.840;LDAF=0.7481;AVGPOST=0.8511;RSQ=0.7213;ERATE=0.0238;THETA=0.0007;AC=1710;AN=2184 GT:DS:GL:BD 0.78296703 1
1 27525856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0153;AVGPOST=0.9921;RSQ=0.7863;ERATE=0.0007;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27525923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0361;AVGPOST=0.9889;RSQ=0.8899;ERATE=0.0007;THETA=0.0007;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 27526025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.661;LDAF=0.0105;AVGPOST=0.9906;RSQ=0.7206;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27526211 . TCA T 243 PASS INDEL;BAVGPOST=0.996;BRSQ=0.605;LDAF=0.0065;AVGPOST=0.9935;RSQ=0.6022;ERATE=0.0007;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27526215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.484;LDAF=0.0106;AVGPOST=0.9878;RSQ=0.5525;ERATE=0.0016;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27526262 . G GACA 88 PASS INDEL;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0086;AVGPOST=0.9981;RSQ=0.9116;ERATE=0.0006;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27526322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8739;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27526547 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27526548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9566;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27526560 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9978;RSQ=0.8925;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27526671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.3125;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27526677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.937;LDAF=0.7817;AVGPOST=0.9308;RSQ=0.8638;ERATE=0.0093;THETA=0.0006;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 27526824 . T TG 1919 PASS INDEL;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0215;AVGPOST=0.9942;RSQ=0.9132;ERATE=0.0005;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27526989 . TACACACACATAC T 1412 PASS INDEL;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0090;AVGPOST=0.9969;RSQ=0.8766;ERATE=0.0007;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27527179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9772;ERATE=0.0004;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27527205 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4961;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27527295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.517;LDAF=0.0352;AVGPOST=0.9638;RSQ=0.5828;ERATE=0.0019;THETA=0.0025;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 27527326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.481;LDAF=0.0331;AVGPOST=0.9856;RSQ=0.8236;ERATE=0.0020;THETA=0.0017;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27527356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.831;LDAF=0.0520;AVGPOST=0.9917;RSQ=0.9392;ERATE=0.0008;THETA=0.0012;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 27527373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.833;LDAF=0.1226;AVGPOST=0.9562;RSQ=0.8562;ERATE=0.0058;THETA=0.0013;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 27527374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0222;AVGPOST=0.9958;RSQ=0.9259;ERATE=0.0006;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27527386 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.847;LDAF=0.0073;AVGPOST=0.9960;RSQ=0.7787;ERATE=0.0006;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27527417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27527628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27527659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8910;ERATE=0.0004;THETA=0.0056;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27527707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8130;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27527713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0162;AVGPOST=0.9991;RSQ=0.9746;ERATE=0.0004;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27527728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0456;AVGPOST=0.9981;RSQ=0.9827;ERATE=0.0004;THETA=0.0014;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 27527799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27527922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0004;THETA=0.0012;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27527931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0295;AVGPOST=0.9987;RSQ=0.9805;ERATE=0.0004;THETA=0.0028;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27527971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9170;ERATE=0.0005;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27527989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.977;LDAF=0.1199;AVGPOST=0.9919;RSQ=0.9750;ERATE=0.0011;THETA=0.0016;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 27528080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5125;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27528081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5225;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27528196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27528299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27528427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.4979;ERATE=0.0005;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27528441 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0145;AVGPOST=0.9983;RSQ=0.9579;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27528452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0322;AVGPOST=0.9979;RSQ=0.9787;ERATE=0.0004;THETA=0.0036;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 27528516 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9107;ERATE=0.0007;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27528527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6875;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27528573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.779;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7565;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27528823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.0917;AVGPOST=0.9978;RSQ=0.9920;ERATE=0.0004;THETA=0.0010;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 27528827 . C CTGGGGAGA 358 PASS INDEL;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6161;ERATE=0.0005;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27528840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0958;AVGPOST=0.9941;RSQ=0.9824;ERATE=0.0004;THETA=0.0025;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 27528853 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0004;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27528886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7462;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27528907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.0949;AVGPOST=0.9961;RSQ=0.9869;ERATE=0.0004;THETA=0.0018;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 27528910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0519;AVGPOST=0.9968;RSQ=0.9779;ERATE=0.0004;THETA=0.0018;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 27528926 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27528962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.935;LDAF=0.4445;AVGPOST=0.9588;RSQ=0.9405;ERATE=0.0011;THETA=0.0060;AC=967;AN=2184 GT:DS:GL:BD 0.44276556 0
1 27528969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8922;ERATE=0.0003;THETA=0.0069;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27529011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4752;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27529012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8734;ERATE=0.0004;THETA=0.0138;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27529055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0169;AVGPOST=0.9989;RSQ=0.9694;ERATE=0.0004;THETA=0.0089;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27529094 . C CGCTAA 155 PASS INDEL;BAVGPOST=0.998;BRSQ=0.550;LDAF=0.0037;AVGPOST=0.9944;RSQ=0.3592;ERATE=0.0010;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27529134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9706;ERATE=0.0003;THETA=0.0099;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27529144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4295;ERATE=0.0004;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27529174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7247;ERATE=0.0004;THETA=0.0128;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27529313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.528;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6381;ERATE=0.0005;THETA=0.0136;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27529434 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.713;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8472;ERATE=0.0004;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27529475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6662;ERATE=0.0004;THETA=0.0070;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27529500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8558;ERATE=0.0005;THETA=0.0070;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27529510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0003;THETA=0.0138;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27529511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0141;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27529677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0103;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27529799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.900;LDAF=0.0390;AVGPOST=0.9921;RSQ=0.9104;ERATE=0.0004;THETA=0.0214;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 27530027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0114;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27530052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.905;LDAF=0.1741;AVGPOST=0.9635;RSQ=0.9057;ERATE=0.0059;THETA=0.0160;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 27530063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0004;THETA=0.0369;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27530192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.878;LDAF=0.2452;AVGPOST=0.9417;RSQ=0.8918;ERATE=0.0056;THETA=0.0200;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 27530243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0005;THETA=0.0210;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27530285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.834;LDAF=0.0277;AVGPOST=0.9877;RSQ=0.8209;ERATE=0.0005;THETA=0.0093;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27530342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0251;AVGPOST=0.9973;RSQ=0.9568;ERATE=0.0005;THETA=0.0166;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 27530409 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9077;ERATE=0.0003;THETA=0.0120;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27530416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27530514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27530533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7833;ERATE=0.0004;THETA=0.0067;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27530610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5392;ERATE=0.0004;THETA=0.0155;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27530617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0149;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27530640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0332;AVGPOST=0.9969;RSQ=0.9645;ERATE=0.0004;THETA=0.0084;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 27530695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.951;LDAF=0.1170;AVGPOST=0.9848;RSQ=0.9436;ERATE=0.0006;THETA=0.0021;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 27530726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4760;ERATE=0.0005;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27530729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27530890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.8903;ERATE=0.0003;THETA=0.0054;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27530956 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0138;AVGPOST=0.9990;RSQ=0.9738;ERATE=0.0004;THETA=0.0050;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27530965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.2319;AVGPOST=0.9898;RSQ=0.9791;ERATE=0.0005;THETA=0.0016;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 27530987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27531023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27531135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27531165 . GTTTA G 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6205;ERATE=0.0007;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27531203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27531275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27531295 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8844;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27531312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7464;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27531474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27531587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0284;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0011;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27531845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9281;ERATE=0.0008;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27531892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9667;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27531900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27532028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9143;ERATE=0.0010;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27532049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27532299 . C CT 61 PASS INDEL;BAVGPOST=0.996;BRSQ=0.725;LDAF=0.0047;AVGPOST=0.9956;RSQ=0.6457;ERATE=0.0017;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27532319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9114;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27532371 . CACAG C 482 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9050;ERATE=0.0005;THETA=0.0029;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27532509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6678;ERATE=0.0006;THETA=0.0073;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27532636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6808;ERATE=0.0007;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27532679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2381;AVGPOST=0.9936;RSQ=0.9869;ERATE=0.0008;THETA=0.0016;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 27532701 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27532770 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5470;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27532815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6386;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27532871 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9369;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27532903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6606;ERATE=0.0005;THETA=0.0040;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27532904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7995;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27532928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6251;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27532933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0042;AVGPOST=0.9954;RSQ=0.6036;ERATE=0.0004;THETA=0.0041;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27532937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7673;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27533018 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8391;ERATE=0.0003;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27533084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27533095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7828;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27533255 . CG C 16205 PASS INDEL;BAVGPOST=0.970;BRSQ=0.948;LDAF=0.4714;AVGPOST=0.9787;RSQ=0.9698;ERATE=0.0008;THETA=0.0005;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 27533260 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.4788;AVGPOST=0.9877;RSQ=0.9828;ERATE=0.0003;THETA=0.0009;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 27533261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.922;LDAF=0.4454;AVGPOST=0.9563;RSQ=0.9329;ERATE=0.0121;THETA=0.0027;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 27533263 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.1710;AVGPOST=0.9959;RSQ=0.9907;ERATE=0.0004;THETA=0.0014;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 27533281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27533306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27533361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5273;AVGPOST=0.9965;RSQ=0.9950;ERATE=0.0010;THETA=0.0004;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 27533367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4777;AVGPOST=0.9976;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 27533543 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5778;ERATE=0.0004;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27533613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0064;AVGPOST=0.9973;RSQ=0.8459;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27533621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8508;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27533754 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27533871 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0482;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 27533903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27533919 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27534080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7139;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27534165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27534181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.4919;AVGPOST=0.9946;RSQ=0.9922;ERATE=0.0005;THETA=0.0007;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 27534207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1760;AVGPOST=0.9948;RSQ=0.9866;ERATE=0.0009;THETA=0.0006;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 27534232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5628;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27534244 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27534311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9561;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27534365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8147;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27534479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7772;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27534504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9084;ERATE=0.0004;THETA=0.0032;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27534511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0483;AVGPOST=0.9994;RSQ=0.9942;ERATE=0.0004;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 27534525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0410;AVGPOST=0.9989;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 27534641 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6384;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27534715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0441;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 27534822 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27534933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27535019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0504;AVGPOST=0.9966;RSQ=0.9746;ERATE=0.0006;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 27535057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6992;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27535062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27535176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8943;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27535177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0481;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 27535208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9990;RSQ=0.9508;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27535252 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27535403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27535417 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27535477 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4981;AVGPOST=0.9948;RSQ=0.9917;ERATE=0.0019;THETA=0.0006;AC=1089;AN=2184 GT:DS:GL:BD 0.49862638 0
1 27535480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9085;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27535520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8378;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27535663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0423;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0003;THETA=0.0007;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 27535708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9993;RSQ=0.9787;ERATE=0.0003;THETA=0.0013;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27535718 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27535756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0487;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 27535797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0469;AVGPOST=0.9978;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 27535868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4601;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27535869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27535967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0489;AVGPOST=0.9990;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27535982 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27536065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.930;LDAF=0.0762;AVGPOST=0.9861;RSQ=0.9273;ERATE=0.0044;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 27536071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0087;AVGPOST=0.9995;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27536079 . CT C 79 PASS INDEL;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.5870;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27536105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27536248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2237;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0004;THETA=0.0006;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 27536274 . T TTATC 10049 PASS INDEL;BAVGPOST=0.993;BRSQ=0.917;LDAF=0.0451;AVGPOST=0.9961;RSQ=0.9696;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 27536305 . C CT 668 PASS INDEL;BAVGPOST=0.991;BRSQ=0.877;LDAF=0.0415;AVGPOST=0.9923;RSQ=0.9276;ERATE=0.0004;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 27536309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27536336 . TTATC T 7071 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0489;AVGPOST=0.9990;RSQ=0.9916;ERATE=0.0004;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 27536345 . CATCT C 469 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8513;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27536357 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5425;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27536387 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0043;AVGPOST=0.9982;RSQ=0.8289;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27536397 rs5772135 A ATCTG 4164 PASS INDEL;BAVGPOST=0.990;BRSQ=0.850;LDAF=0.0355;AVGPOST=0.9755;RSQ=0.7504;ERATE=0.0063;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27536424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.801;LDAF=0.1742;AVGPOST=0.9428;RSQ=0.8386;ERATE=0.0087;THETA=0.0006;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 27536459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0467;AVGPOST=0.9981;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 27536476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27536487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9327;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27536520 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1723;AVGPOST=0.9966;RSQ=0.9917;ERATE=0.0004;THETA=0.0022;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 27536529 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9064;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27536533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9245;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27536613 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8768;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27536672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2654;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 27536680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9560;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27536691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0482;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 27536719 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27536727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0480;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 27536758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5066;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27536768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27536819 . G GA 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4722;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27536927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27536990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27537060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2234;AVGPOST=0.9976;RSQ=0.9943;ERATE=0.0005;THETA=0.0027;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 27537077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2238;AVGPOST=0.9964;RSQ=0.9912;ERATE=0.0004;THETA=0.0005;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 27537127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27537166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0099;AVGPOST=0.9966;RSQ=0.8578;ERATE=0.0006;THETA=0.0016;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27537184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27537194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9083;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27537230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9312;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27537298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27537425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2415;AVGPOST=0.9950;RSQ=0.9898;ERATE=0.0004;THETA=0.0003;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 27537458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.488;LDAF=0.0279;AVGPOST=0.9707;RSQ=0.5768;ERATE=0.0074;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27537461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27537462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0217;AVGPOST=0.9983;RSQ=0.9744;ERATE=0.0003;THETA=0.0039;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27537470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7428;ERATE=0.0004;THETA=0.0049;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27537557 . AAAG A 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3550;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27537603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27537615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9682;ERATE=0.0002;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27537687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0002;THETA=0.0008;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 27537736 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27537797 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0709;AVGPOST=0.9966;RSQ=0.9798;ERATE=0.0002;THETA=0.0005;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 27537882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6893;ERATE=0.0009;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27537916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6871;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27538187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6027;ERATE=0.0002;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27538234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1689;AVGPOST=0.9969;RSQ=0.9926;ERATE=0.0004;THETA=0.0007;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 27538325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0070;AVGPOST=0.9991;RSQ=0.9486;ERATE=0.0002;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27538326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.2762;AVGPOST=0.9911;RSQ=0.9839;ERATE=0.0004;THETA=0.0001;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 27538421 . A AT 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7234;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27538466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2454;AVGPOST=0.9978;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 27538561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7213;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27538640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8055;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27538643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1194;AVGPOST=0.9988;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 27538829 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27538849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8558;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27538850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0087;AVGPOST=0.9988;RSQ=0.9440;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27538863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27538942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8426;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27539136 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0752;AVGPOST=0.9977;RSQ=0.9880;ERATE=0.0003;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 27539291 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8575;ERATE=0.0012;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27539299 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8264;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27539354 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5190;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27539452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1210;AVGPOST=0.9986;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 27539501 . TTTTTC T 41 PASS INDEL;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3692;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27539539 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.8976;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27539542 . TTTC T 310 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7929;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27539546 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4750;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27539565 rs71564512 C CT 10384 PASS INDEL;BAVGPOST=0.945;BRSQ=0.851;LDAF=0.2386;AVGPOST=0.8970;RSQ=0.7802;ERATE=0.0264;THETA=0.0003;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 27539574 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27539774 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1693;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0006;THETA=0.0006;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 27539827 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27539849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1699;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 27539855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1695;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0004;THETA=0.0001;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 27539911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.7640;AVGPOST=0.9952;RSQ=0.9898;ERATE=0.0004;THETA=0.0002;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 27539921 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0187;AVGPOST=0.9995;RSQ=0.9883;ERATE=0.0002;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27539964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6786;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27540083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27540158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1689;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0002;THETA=0.0003;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 27540245 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27540250 . TA T 453 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8640;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27540352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3995;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27540368 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0386;AVGPOST=0.9969;RSQ=0.9678;ERATE=0.0005;THETA=0.0026;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 27540453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5424;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27540515 . A AGG 1520 PASS INDEL;BAVGPOST=0.900;BRSQ=0.567;LDAF=0.1607;AVGPOST=0.8574;RSQ=0.5641;ERATE=0.0296;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 27540665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0765;AVGPOST=0.9947;RSQ=0.9698;ERATE=0.0006;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 27540670 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.557;LDAF=0.1494;AVGPOST=0.8672;RSQ=0.5439;ERATE=0.0457;THETA=0.0003;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 27540690 . TA T 771 PASS INDEL;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0101;AVGPOST=0.9949;RSQ=0.7954;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27540848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6715;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27540861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5731;AVGPOST=0.9967;RSQ=0.9944;ERATE=0.0006;THETA=0.0002;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 27540922 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0213;AVGPOST=0.9993;RSQ=0.9856;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27540947 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5708;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0006;THETA=0.0003;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 27541083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8294;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27541098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.6920;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27541191 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9053;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27541233 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7701;AVGPOST=0.9969;RSQ=0.9932;ERATE=0.0005;THETA=0.0034;AC=1682;AN=2184 GT:DS:GL:BD 0.77014655 1
1 27541269 . TG T 5078 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0395;AVGPOST=0.9970;RSQ=0.9731;ERATE=0.0004;THETA=0.0010;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 27541406 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27541426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2872;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0005;THETA=0.0033;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 27541531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27541693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0080;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27541971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3972;AVGPOST=0.9977;RSQ=0.9966;ERATE=0.0004;THETA=0.0043;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 27542035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3987;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 27542055 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8127;ERATE=0.0002;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27542116 . AC A 137 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7822;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27542155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0225;AVGPOST=0.9993;RSQ=0.9864;ERATE=0.0002;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27542159 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.3982;AVGPOST=0.9946;RSQ=0.9922;ERATE=0.0007;THETA=0.0030;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 27542181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7279;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27542216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8084;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27542242 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3912;AVGPOST=0.9957;RSQ=0.9933;ERATE=0.0005;THETA=0.0163;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 27542258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27542325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8614;ERATE=0.0002;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27542376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.975;LDAF=0.4155;AVGPOST=0.9820;RSQ=0.9747;ERATE=0.0033;THETA=0.0048;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 27542413 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5901;ERATE=0.0011;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27542422 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3324;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0015;THETA=0.0006;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 27542459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0191;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0014;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27542518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0417;AVGPOST=0.9981;RSQ=0.9857;ERATE=0.0007;THETA=0.0031;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 27542606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27542634 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27542664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2630;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0047;THETA=0.0016;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 27542692 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0042;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27542758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27542786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9943;ERATE=0.0003;THETA=0.0049;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27542790 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0279;AVGPOST=0.9971;RSQ=0.9629;ERATE=0.0099;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 27542838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9806;ERATE=0.0003;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27542850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.9081;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27542853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27542877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27542958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0461;AVGPOST=0.9982;RSQ=0.9868;ERATE=0.0029;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 27543072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5344;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0026;THETA=0.0007;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 27543136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27543173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0011;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27543292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9530;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27543305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0701;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 27543321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9307;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27543381 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27543384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0004;THETA=0.0019;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27543440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27543467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4987;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0006;AC=1089;AN=2184 GT:DS:GL:BD 0.49862638 0
1 27543605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27543620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27543633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1009;AVGPOST=0.9986;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 27543660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0114;AVGPOST=0.9997;RSQ=0.9878;ERATE=0.0006;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27543661 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5006;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0004;THETA=0.0005;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 27543710 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27543754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4989;AVGPOST=0.9990;RSQ=0.9987;ERATE=0.0005;THETA=0.0006;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 27543794 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4988;AVGPOST=0.9991;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 27543844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0258;AVGPOST=0.9988;RSQ=0.9829;ERATE=0.0004;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27543888 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.8488;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27543990 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27544015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8835;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27544018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8364;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27544124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9265;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27544138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7384;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27544144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.357;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6064;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27544171 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.953;LDAF=0.5168;AVGPOST=0.9567;RSQ=0.9415;ERATE=0.0108;THETA=0.0003;AC=1143;AN=2184 GT:DS:GL:BD 0.52335167 1
1 27544193 . A AC 24540 PASS INDEL;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.5121;AVGPOST=0.9771;RSQ=0.9686;ERATE=0.0040;THETA=0.0007;AC=1117;AN=2184 GT:DS:GL:BD 0.51144689 1
1 27544201 . AC A 632 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9991;RSQ=0.9629;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27544254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9583;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27544294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3656;AVGPOST=0.9951;RSQ=0.9938;ERATE=0.0006;THETA=0.0003;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 27544299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27544302 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5068;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0004;THETA=0.0010;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 27544325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5070;AVGPOST=0.9974;RSQ=0.9965;ERATE=0.0005;THETA=0.0004;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 27544358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27544427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9745;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27544471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0916;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 27544506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27544547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1105;AN=2184 GT:DS:GL:BD 0.50595236 1
1 27544605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1105;AN=2184 GT:DS:GL:BD 0.50595236 1
1 27544629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27544645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27544670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27544673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27544840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27544851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27544884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5069;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0002;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 27544981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 27545055 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0079;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 27545063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4977;AVGPOST=0.9974;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 27545204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4978;AVGPOST=0.9974;RSQ=0.9966;ERATE=0.0005;THETA=0.0027;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 27545219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0844;AVGPOST=0.9966;RSQ=0.9849;ERATE=0.0004;THETA=0.0071;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 27545271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.4802;AVGPOST=0.9936;RSQ=0.9924;ERATE=0.0007;THETA=0.0002;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 27545273 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.4808;AVGPOST=0.9941;RSQ=0.9932;ERATE=0.0005;THETA=0.0020;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 27545277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6801;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27545320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8917;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27545324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0010;AVGPOST=0.9984;RSQ=0.3566;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27545326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5146;AVGPOST=0.9903;RSQ=0.9872;ERATE=0.0007;THETA=0.0046;AC=1125;AN=2184 GT:DS:GL:BD 0.51510990 1
1 27545349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4611;ERATE=0.0006;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27545441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0134;AVGPOST=0.9984;RSQ=0.9467;ERATE=0.0004;THETA=0.0072;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27545521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5287;AVGPOST=0.9869;RSQ=0.9822;ERATE=0.0028;THETA=0.0051;AC=1157;AN=2184 GT:DS:GL:BD 0.52976191 1
1 27545526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9993;RSQ=0.9709;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27545559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.1018;AVGPOST=0.9948;RSQ=0.9786;ERATE=0.0018;THETA=0.0102;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 27545571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0048;AVGPOST=0.9957;RSQ=0.6471;ERATE=0.0009;THETA=0.0158;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27545785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27545946 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1202;AVGPOST=0.9956;RSQ=0.9858;ERATE=0.0009;THETA=0.0008;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 27546007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0037;AVGPOST=0.9945;RSQ=0.4027;ERATE=0.0019;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27546075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.1947;AVGPOST=0.9926;RSQ=0.9828;ERATE=0.0006;THETA=0.0021;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 27546121 . TG T 5267 PASS INDEL;BAVGPOST=0.965;BRSQ=0.937;LDAF=0.3153;AVGPOST=0.9566;RSQ=0.9358;ERATE=0.0029;THETA=0.0004;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 27546132 rs34354338 GT G 21762 PASS INDEL;BAVGPOST=0.990;BRSQ=0.987;LDAF=0.3338;AVGPOST=0.9839;RSQ=0.9768;ERATE=0.0008;THETA=0.0002;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 27546134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6482;ERATE=0.0005;THETA=0.0062;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27546159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4559;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27546246 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1230;AVGPOST=0.9957;RSQ=0.9861;ERATE=0.0009;THETA=0.0010;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 27546369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7350;ERATE=0.0006;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27546419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.856;LDAF=0.0340;AVGPOST=0.9878;RSQ=0.8662;ERATE=0.0004;THETA=0.0015;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 27546478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1328;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 27546581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1224;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 27546664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2853;AVGPOST=0.9957;RSQ=0.9920;ERATE=0.0005;THETA=0.0004;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 27546726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4435;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27546746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27546747 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3195;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 27546857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27547011 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27547081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8538;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27547363 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1362;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0005;THETA=0.0002;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 27547365 . CTGTTCTGTTGT C 39044 PASS INDEL;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1878;AVGPOST=0.9951;RSQ=0.9887;ERATE=0.0011;THETA=0.0002;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 27547385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27547522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.7376;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27547593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0680;AVGPOST=0.9958;RSQ=0.9761;ERATE=0.0004;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 27547608 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4601;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27547614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27547639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0218;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0003;THETA=0.0009;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27547705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0805;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 27547744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27547813 . TCCTC T 217 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27548050 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7532;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27548190 . ATATT A 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6784;ERATE=0.0011;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27548196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0040;AVGPOST=0.9952;RSQ=0.5265;ERATE=0.0007;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27548205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0910;AVGPOST=0.9979;RSQ=0.9905;ERATE=0.0004;THETA=0.0015;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 27548243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27548316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27548380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.850;LDAF=0.0233;AVGPOST=0.9924;RSQ=0.8739;ERATE=0.0004;THETA=0.0016;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27548389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0207;AVGPOST=0.9995;RSQ=0.9889;ERATE=0.0003;THETA=0.0010;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27548693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8323;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27548728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7319;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27548767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8476;ERATE=0.0005;THETA=0.0072;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27548991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5241;AVGPOST=0.9948;RSQ=0.9930;ERATE=0.0022;THETA=0.0009;AC=1142;AN=2184 GT:DS:GL:BD 0.52289379 1
1 27549093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9059;ERATE=0.0010;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27549193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27549367 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0128;AVGPOST=0.9988;RSQ=0.9598;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27549424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.941;LDAF=0.6643;AVGPOST=0.9649;RSQ=0.9394;ERATE=0.0035;THETA=0.0002;AC=1477;AN=2184 GT:DS:GL:BD 0.67628205 1
1 27549641 . C CA 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4298;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27549768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27549848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9995;RSQ=0.9808;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27549876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9320;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27549923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27550004 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0231;AVGPOST=0.9992;RSQ=0.9861;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 27550015 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0348;AVGPOST=0.9980;RSQ=0.9784;ERATE=0.0003;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 27550040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8716;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27550085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0003;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27550226 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0003;THETA=0.0030;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27550227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8919;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27550246 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6237;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27550311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27550316 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27550339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8168;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27550386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7442;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27550631 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0815;AVGPOST=0.9986;RSQ=0.9949;ERATE=0.0003;THETA=0.0007;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 27550665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27550669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27550707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0244;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 27550713 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0233;AVGPOST=0.9991;RSQ=0.9838;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 27550827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27551194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0512;AVGPOST=0.9933;RSQ=0.9552;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 27551216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6461;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27551262 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27551325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9178;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27551556 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9994;RSQ=0.9773;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27551617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5498;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27551633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5636;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27551768 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6825;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27551769 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27551920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6094;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27551943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27552019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0802;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0003;THETA=0.0009;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27552162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27552242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27552294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5548;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27552330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27552395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5988;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27552400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0396;AVGPOST=0.9987;RSQ=0.9877;ERATE=0.0004;THETA=0.0016;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 27552612 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27552635 rs79847406 TTTTG T 5207 PASS INDEL;BAVGPOST=0.597;BRSQ=0.394;LDAF=0.4130;AVGPOST=0.6996;RSQ=0.5536;ERATE=0.0159;THETA=0.0006;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 27552755 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0158;AVGPOST=0.9924;RSQ=0.8028;ERATE=0.0009;THETA=0.0020;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27552818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.915;LDAF=0.6833;AVGPOST=0.9221;RSQ=0.8718;ERATE=0.0074;THETA=0.0005;AC=1534;AN=2184 GT:DS:GL:BD 0.70238096 1
1 27552843 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.653;LDAF=0.0266;AVGPOST=0.9720;RSQ=0.6207;ERATE=0.0015;THETA=0.0031;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27552907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0083;AVGPOST=0.9980;RSQ=0.9122;ERATE=0.0006;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27553053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3922;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27553060 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9296;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27553166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0055;AVGPOST=0.9979;RSQ=0.8416;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27553223 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9495;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27553224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27553242 . GC G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27553257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27553273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7033;AVGPOST=0.9976;RSQ=0.9953;ERATE=0.0004;THETA=0.0007;AC=1537;AN=2184 GT:DS:GL:BD 0.70375460 1
1 27553299 . GT G 744 PASS INDEL;BAVGPOST=0.963;BRSQ=0.485;LDAF=0.0574;AVGPOST=0.9333;RSQ=0.5177;ERATE=0.0137;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 27553335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8670;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27553352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6882;ERATE=0.0006;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27553416 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27553506 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7604;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27553621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.0503;AVGPOST=0.9981;RSQ=0.9852;ERATE=0.0004;THETA=0.0009;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 27553658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0343;AVGPOST=0.9980;RSQ=0.9751;ERATE=0.0006;THETA=0.0005;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 27553746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.605;LDAF=0.0056;AVGPOST=0.9962;RSQ=0.7206;ERATE=0.0005;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27553800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.930;LDAF=0.2190;AVGPOST=0.9697;RSQ=0.9376;ERATE=0.0008;THETA=0.0006;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 27553852 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0121;AVGPOST=0.9984;RSQ=0.9481;ERATE=0.0004;THETA=0.0022;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27553864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0186;AVGPOST=0.9991;RSQ=0.9829;ERATE=0.0003;THETA=0.0012;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 27554005 . TTTTTC T 870 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0123;AVGPOST=0.9957;RSQ=0.8770;ERATE=0.0005;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27554064 . T TG 266 PASS INDEL;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6022;ERATE=0.0005;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27554185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4107;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27554265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4742;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27554371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5880;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27554375 . TA T 25137 PASS INDEL;BAVGPOST=0.920;BRSQ=0.812;LDAF=0.7097;AVGPOST=0.8752;RSQ=0.7724;ERATE=0.0190;THETA=0.0006;AC=1584;AN=2184 GT:DS:GL:BD 0.72527474 1
1 27554477 . ATTTT A 403 PASS INDEL;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0102;AVGPOST=0.9941;RSQ=0.7741;ERATE=0.0010;THETA=0.0019;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27554478 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.932;LDAF=0.6161;AVGPOST=0.9508;RSQ=0.9259;ERATE=0.0068;THETA=0.0018;AC=1370;AN=2184 GT:DS:GL:BD 0.62728935 1
1 27554660 . CTT C 136 PASS INDEL;BAVGPOST=0.963;BRSQ=0.241;LDAF=0.0574;AVGPOST=0.9219;RSQ=0.4341;ERATE=0.0059;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 27554897 . C CTT 1640 PASS INDEL;BAVGPOST=0.814;BRSQ=0.335;LDAF=0.2331;AVGPOST=0.7399;RSQ=0.3699;ERATE=0.0489;THETA=0.0027;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 27554901 . T TCTCC 4241 PASS INDEL;BAVGPOST=0.627;BRSQ=0.346;LDAF=0.5170;AVGPOST=0.6686;RSQ=0.4369;ERATE=0.0271;THETA=0.0022;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 27554924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.688;BRSQ=0.410;LDAF=0.4597;AVGPOST=0.7026;RSQ=0.4606;ERATE=0.0683;THETA=0.0008;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 27554940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.517;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3781;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27555107 . AT A 83 PASS INDEL;BAVGPOST=0.955;BRSQ=0.305;LDAF=0.0638;AVGPOST=0.9109;RSQ=0.4030;ERATE=0.0104;THETA=0.0013;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 27555120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4468;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27555245 rs112726665 CTTT C 904 PASS INDEL;BAVGPOST=0.974;BRSQ=0.642;LDAF=0.0440;AVGPOST=0.9884;RSQ=0.9006;ERATE=0.0010;THETA=0.0013;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 27555325 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.813;LDAF=0.0481;AVGPOST=0.9890;RSQ=0.9163;ERATE=0.0009;THETA=0.0067;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 27555332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9601;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27555463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0508;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0008;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 27555534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27555661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27555684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27555770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9853;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27555800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27555804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0127;AVGPOST=0.9986;RSQ=0.9601;ERATE=0.0003;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27556003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.841;LDAF=0.0133;AVGPOST=0.9988;RSQ=0.9615;ERATE=0.0005;THETA=0.0022;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27556004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27556061 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6350;AVGPOST=0.9972;RSQ=0.9960;ERATE=0.0003;THETA=0.0007;AC=1387;AN=2184 GT:DS:GL:BD 0.63507324 1
1 27556137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0038;AVGPOST=0.9984;RSQ=0.8157;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27556157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9996;RSQ=0.9810;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27556177 rs112103932 T TA 3884 PASS INDEL;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0247;AVGPOST=0.9989;RSQ=0.9808;ERATE=0.0004;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 27556185 rs113375792 CT C 4302 PASS INDEL;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0527;AVGPOST=0.9969;RSQ=0.9785;ERATE=0.0006;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 27556270 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27556288 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6441;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27556342 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0407;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 27556437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4537;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27556457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8207;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27556569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7960;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27556592 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0472;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 27556658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9848;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27556724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7933;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27556751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27556762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27556854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6883;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27556902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27556923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27556947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27557010 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0049;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27557073 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7488;AVGPOST=0.9947;RSQ=0.9893;ERATE=0.0021;THETA=0.0013;AC=1635;AN=2184 GT:DS:GL:BD 0.74862635 1
1 27557096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0383;AVGPOST=0.9987;RSQ=0.9896;ERATE=0.0003;THETA=0.0011;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 27557146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9871;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27557147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0139;AVGPOST=0.9994;RSQ=0.9812;ERATE=0.0004;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27557165 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27557218 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9362;ERATE=0.0004;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27557255 . ACT A 253 PASS INDEL;BAVGPOST=0.992;BRSQ=0.804;LDAF=0.0195;AVGPOST=0.9936;RSQ=0.8531;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 27557298 . CTG C 2433 PASS INDEL;BAVGPOST=0.992;BRSQ=0.804;LDAF=0.0218;AVGPOST=0.9932;RSQ=0.8595;ERATE=0.0006;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27557299 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.7207;AVGPOST=0.9946;RSQ=0.9899;ERATE=0.0005;THETA=0.0011;AC=1573;AN=2184 GT:DS:GL:BD 0.72023809 1
1 27557363 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27557395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27557423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0061;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 27557487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0059;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27557556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8983;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27557568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7278;ERATE=0.0004;THETA=0.0053;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27557599 . C CT 83 PASS INDEL;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0104;AVGPOST=0.9927;RSQ=0.7382;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27557689 . T TA 331 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8444;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27557697 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.927;LDAF=0.0316;AVGPOST=0.9951;RSQ=0.9435;ERATE=0.0005;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 27557707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9080;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27557792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9563;ERATE=0.0003;THETA=0.0028;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27557813 . T TG 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3756;ERATE=0.0005;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27557900 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6183;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27557908 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9674;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27558054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27558172 . ATTTTAATT A 918 PASS INDEL;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0103;AVGPOST=0.9981;RSQ=0.9275;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27558228 . T TG 90 PASS INDEL;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4273;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27558367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9697;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27558368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8891;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27558425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8916;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27558469 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27558499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9201;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27558513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8731;ERATE=0.0003;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27558517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7624;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27558583 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9606;ERATE=0.0004;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27558658 . AT A 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27558785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7785;ERATE=0.0007;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27558897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8185;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27558957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6100;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27558962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27559016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6299;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27559071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.546;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5804;ERATE=0.0007;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27559388 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.7280;ERATE=0.0004;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27559432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0089;AVGPOST=0.9952;RSQ=0.7943;ERATE=0.0004;THETA=0.0021;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27559469 . CT C 804 PASS INDEL;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0062;AVGPOST=0.9982;RSQ=0.8826;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27559470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27559562 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4173;AVGPOST=0.9930;RSQ=0.9892;ERATE=0.0010;THETA=0.0013;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 27559611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0102;AVGPOST=0.9950;RSQ=0.7894;ERATE=0.0006;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27559615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7813;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27559739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.769;LDAF=0.0172;AVGPOST=0.9931;RSQ=0.8373;ERATE=0.0005;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27559833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0176;AVGPOST=0.9992;RSQ=0.9826;ERATE=0.0003;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27559890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8402;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27559946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0431;AVGPOST=0.9952;RSQ=0.9538;ERATE=0.0008;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 27560023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8656;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27560118 . TG T 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4466;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27560141 . C CA 39 PASS INDEL;BAVGPOST=0.986;BRSQ=0.608;LDAF=0.0266;AVGPOST=0.9808;RSQ=0.7085;ERATE=0.0029;THETA=0.0011;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27560261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6159;AVGPOST=0.9973;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=1345;AN=2184 GT:DS:GL:BD 0.61584246 1
1 27560389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7214;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27560465 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3948;AVGPOST=0.9913;RSQ=0.9863;ERATE=0.0022;THETA=0.0009;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 27560490 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7732;ERATE=0.0004;THETA=0.0030;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27560679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7895;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27560736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0118;AVGPOST=0.9975;RSQ=0.9183;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27560754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27560900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5398;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27560968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27561045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5722;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27561071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6218;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0006;THETA=0.0003;AC=1357;AN=2184 GT:DS:GL:BD 0.62133700 1
1 27561219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3243;AVGPOST=0.9969;RSQ=0.9939;ERATE=0.0006;THETA=0.0009;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 27561323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6765;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27561335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27561348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8028;ERATE=0.0003;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27561421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27561501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0066;AVGPOST=0.9968;RSQ=0.8191;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27561578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.965;LDAF=0.3417;AVGPOST=0.9832;RSQ=0.9739;ERATE=0.0007;THETA=0.0003;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 27561590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4152;AVGPOST=0.9954;RSQ=0.9928;ERATE=0.0005;THETA=0.0004;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 27561600 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27561701 . ATG A 939 PASS INDEL;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0112;AVGPOST=0.9988;RSQ=0.9596;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27561726 . T TG 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27561793 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27561877 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4791;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27561935 . GAAAAC G 119 PASS INDEL;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0088;AVGPOST=0.9915;RSQ=0.6094;ERATE=0.0028;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27561939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9345;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27562018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27562023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3221;AVGPOST=0.9920;RSQ=0.9852;ERATE=0.0012;THETA=0.0011;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 27562025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.6044;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27562054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9310;ERATE=0.0004;THETA=0.0048;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27562141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0141;AVGPOST=0.9978;RSQ=0.9375;ERATE=0.0006;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27562214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9727;ERATE=0.0005;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27562229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9981;RSQ=0.9517;ERATE=0.0005;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27562383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.4595;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27562434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4985;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27562435 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27562456 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3449;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0005;THETA=0.0004;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 27562543 . A AG 34 PASS INDEL;BAVGPOST=0.996;BRSQ=0.454;LDAF=0.0132;AVGPOST=0.9848;RSQ=0.5239;ERATE=0.0020;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27562629 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0052;AVGPOST=0.9973;RSQ=0.8006;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27562630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0075;AVGPOST=0.9981;RSQ=0.8861;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27562631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0039;AVGPOST=0.9954;RSQ=0.5736;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27562636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6852;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27562640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0168;AVGPOST=0.9980;RSQ=0.9494;ERATE=0.0006;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27562684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5002;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27562841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27562952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1115;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0006;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 27563082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2782;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0011;THETA=0.0003;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 27563108 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27563217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27563232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27563249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0452;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 27563279 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0009;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27563357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9622;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27563477 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27563526 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27563682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0058;AVGPOST=0.9973;RSQ=0.8216;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27563699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27563772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0457;AVGPOST=0.9990;RSQ=0.9899;ERATE=0.0004;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 27563802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0065;AVGPOST=0.9990;RSQ=0.9350;ERATE=0.0003;THETA=0.0033;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27563839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9985;RSQ=0.9576;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27563941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0194;AVGPOST=0.9994;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27563966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0037;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27564106 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7931;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27564175 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4524;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27564229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7230;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27564468 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.843;LDAF=0.0595;AVGPOST=0.9736;RSQ=0.8100;ERATE=0.0038;THETA=0.0004;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 27564622 . GGTGACAGA G 252 PASS INDEL;BAVGPOST=0.988;BRSQ=0.390;LDAF=0.0217;AVGPOST=0.9809;RSQ=0.6628;ERATE=0.0008;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27564662 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.873;BRSQ=0.482;LDAF=0.1603;AVGPOST=0.8881;RSQ=0.6878;ERATE=0.0013;THETA=0.0007;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 27564670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.877;BRSQ=0.492;LDAF=0.1731;AVGPOST=0.8576;RSQ=0.6165;ERATE=0.0079;THETA=0.0037;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 27564671 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.682;LDAF=0.1393;AVGPOST=0.9034;RSQ=0.6856;ERATE=0.0097;THETA=0.0015;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 27564719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.798;LDAF=0.0137;AVGPOST=0.9880;RSQ=0.6095;ERATE=0.0010;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27564724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.856;LDAF=0.1206;AVGPOST=0.9744;RSQ=0.9068;ERATE=0.0016;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 27564738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3593;AVGPOST=0.9741;RSQ=0.9583;ERATE=0.0040;THETA=0.0005;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 27564829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0079;AVGPOST=0.9986;RSQ=0.9227;ERATE=0.0004;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27564888 rs77889357 AT A 5710 PASS INDEL;BAVGPOST=0.961;BRSQ=0.909;LDAF=0.2846;AVGPOST=0.9295;RSQ=0.8623;ERATE=0.0109;THETA=0.0003;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 27564987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7427;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27565008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.876;LDAF=0.0168;AVGPOST=0.9965;RSQ=0.9321;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27565069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0061;AVGPOST=0.9915;RSQ=0.4254;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27565102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9727;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27565192 rs35038013 CT C 2936 PASS INDEL;BAVGPOST=0.775;BRSQ=0.594;LDAF=0.4443;AVGPOST=0.7212;RSQ=0.5371;ERATE=0.0426;THETA=0.0021;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 27565265 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0103;AVGPOST=0.9968;RSQ=0.8934;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27565300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.781;LDAF=0.0079;AVGPOST=0.9983;RSQ=0.9022;ERATE=0.0004;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27565338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.576;LDAF=0.0060;AVGPOST=0.9933;RSQ=0.5733;ERATE=0.0008;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27565396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.1133;AVGPOST=0.9963;RSQ=0.9833;ERATE=0.0007;THETA=0.0009;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 27565400 . AG A 451 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0080;AVGPOST=0.9991;RSQ=0.9472;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27565565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4563;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27565620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27565622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27565624 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27565630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27565807 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0200;AVGPOST=0.9981;RSQ=0.9688;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27565855 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9764;ERATE=0.0004;THETA=0.0017;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27565861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27565885 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27565904 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27566117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27566201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 27566232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27566253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27566397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9712;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27566585 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27566601 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27566639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27566670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27566765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27566775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27566791 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27566839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27567015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27567058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27567090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3634;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0003;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 27567120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0010;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27567182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9856;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27567188 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27567226 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2601;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0006;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 27567274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27567359 . TTTG T 322 PASS INDEL;BAVGPOST=0.996;BRSQ=0.607;LDAF=0.0068;AVGPOST=0.9947;RSQ=0.6833;ERATE=0.0012;THETA=0.0031;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27567391 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9808;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27567422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8816;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27567606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9311;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27567607 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27567696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.962;LDAF=0.3533;AVGPOST=0.9753;RSQ=0.9607;ERATE=0.0075;THETA=0.0004;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 27567766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0411;AVGPOST=0.9969;RSQ=0.9727;ERATE=0.0006;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 27567886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27567908 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.835;LDAF=0.0130;AVGPOST=0.9958;RSQ=0.8754;ERATE=0.0004;THETA=0.0043;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27567909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3952;AVGPOST=0.9777;RSQ=0.9662;ERATE=0.0010;THETA=0.0202;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 27568086 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0179;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27568102 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0156;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27568279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.8087;ERATE=0.0004;THETA=0.0271;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27568340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.9840;AVGPOST=0.9991;RSQ=0.9790;ERATE=0.0003;THETA=0.0098;AC=2149;AN=2184 GT:DS:GL:BD 0.98397434 1
1 27568401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8224;ERATE=0.0003;THETA=0.0164;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27568414 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0247;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27568457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0167;AVGPOST=0.9968;RSQ=0.9237;ERATE=0.0004;THETA=0.0111;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27568525 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0119;AVGPOST=0.9968;RSQ=0.9098;ERATE=0.0004;THETA=0.0183;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27568552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0066;AVGPOST=0.9971;RSQ=0.8263;ERATE=0.0006;THETA=0.0194;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27568684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27568691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.723;LDAF=0.0304;AVGPOST=0.9814;RSQ=0.7566;ERATE=0.0066;THETA=0.0120;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27568725 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.938;LDAF=0.4763;AVGPOST=0.9621;RSQ=0.9464;ERATE=0.0053;THETA=0.0018;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 27568832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0124;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27568853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5084;ERATE=0.0003;THETA=0.0127;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27568872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9589;ERATE=0.0003;THETA=0.0148;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27568949 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.939;LDAF=0.1187;AVGPOST=0.9844;RSQ=0.9468;ERATE=0.0042;THETA=0.0083;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 27569002 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5107;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27569009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6142;ERATE=0.0004;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27569065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.440;LDAF=0.0084;AVGPOST=0.9924;RSQ=0.6284;ERATE=0.0009;THETA=0.0125;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27569233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.573;LDAF=0.0040;AVGPOST=0.9939;RSQ=0.3629;ERATE=0.0007;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27569239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.490;LDAF=0.0062;AVGPOST=0.9920;RSQ=0.5213;ERATE=0.0013;THETA=0.0045;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27569272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.762;LDAF=0.0116;AVGPOST=0.9914;RSQ=0.7214;ERATE=0.0006;THETA=0.0137;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27569284 . C CT 261 PASS INDEL;BAVGPOST=0.990;BRSQ=0.638;LDAF=0.0148;AVGPOST=0.9903;RSQ=0.7440;ERATE=0.0008;THETA=0.0034;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27569306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0118;AVGPOST=0.9980;RSQ=0.9209;ERATE=0.0006;THETA=0.0014;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27569425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.529;LDAF=0.0213;AVGPOST=0.9755;RSQ=0.5493;ERATE=0.0030;THETA=0.0045;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27569432 . T TC 1361 PASS INDEL;BAVGPOST=0.979;BRSQ=0.894;LDAF=0.0929;AVGPOST=0.9718;RSQ=0.8655;ERATE=0.0012;THETA=0.0019;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 27569507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.897;LDAF=0.0945;AVGPOST=0.9793;RSQ=0.9008;ERATE=0.0008;THETA=0.0106;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 27569508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6542;ERATE=0.0006;THETA=0.0091;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27569573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.980;LDAF=0.3204;AVGPOST=0.9546;RSQ=0.9289;ERATE=0.0014;THETA=0.0009;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 27569664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5055;ERATE=0.0005;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27569695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.967;LDAF=0.3965;AVGPOST=0.9661;RSQ=0.9476;ERATE=0.0005;THETA=0.0004;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 27569719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.748;LDAF=0.0063;AVGPOST=0.9934;RSQ=0.5818;ERATE=0.0009;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27569773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.518;LDAF=0.0064;AVGPOST=0.9949;RSQ=0.6778;ERATE=0.0012;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27569784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8397;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27569838 . TTTTC T 1183 PASS INDEL;BAVGPOST=0.573;BRSQ=0.171;LDAF=0.3928;AVGPOST=0.6607;RSQ=0.3906;ERATE=0.0261;THETA=0.0014;AC=758;AN=2184 GT:DS:GL:BD 0.34706959 0
1 27569853 . T TTC 452 PASS INDEL;BAVGPOST=0.899;BRSQ=0.568;LDAF=0.1742;AVGPOST=0.8104;RSQ=0.4529;ERATE=0.0238;THETA=0.0038;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27569927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5641;ERATE=0.0005;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27569949 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0063;AVGPOST=0.9982;RSQ=0.8747;ERATE=0.0007;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27569966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0004;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27569984 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8715;ERATE=0.0004;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27570104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8159;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27570152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.618;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8717;ERATE=0.0005;THETA=0.0044;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27570162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7151;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27570199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9755;ERATE=0.0004;THETA=0.0018;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27570282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27570331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27570334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8274;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27570336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8699;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27570337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.893;LDAF=0.9763;AVGPOST=0.9935;RSQ=0.8998;ERATE=0.0009;THETA=0.0020;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 27570404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.940;LDAF=0.0670;AVGPOST=0.9849;RSQ=0.9129;ERATE=0.0040;THETA=0.0027;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 27570405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27570441 rs35922584 C CT 27460 PASS INDEL;BAVGPOST=0.952;BRSQ=0.924;LDAF=0.5356;AVGPOST=0.9633;RSQ=0.9473;ERATE=0.0009;THETA=0.0007;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 27570489 . T TC 2129 PASS INDEL;BAVGPOST=0.863;BRSQ=0.775;LDAF=0.4523;AVGPOST=0.8634;RSQ=0.8082;ERATE=0.0077;THETA=0.0041;AC=1042;AN=2184 GT:DS:GL:BD 0.47710621 0
1 27570495 . T TTC 155 PASS INDEL;BAVGPOST=0.992;BRSQ=0.558;LDAF=0.0064;AVGPOST=0.9952;RSQ=0.7293;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27570508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6380;ERATE=0.0005;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27570592 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.810;LDAF=0.0169;AVGPOST=0.9924;RSQ=0.8297;ERATE=0.0007;THETA=0.0038;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27570627 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27570918 . TCTGTGCTCACATGG T 1385 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7632;ERATE=0.0004;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27570946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6241;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27571069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0182;AVGPOST=0.9975;RSQ=0.9475;ERATE=0.0006;THETA=0.0029;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27571231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8507;ERATE=0.0005;THETA=0.0036;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27571409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.728;LDAF=0.0070;AVGPOST=0.9970;RSQ=0.8140;ERATE=0.0005;THETA=0.0022;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27571523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.727;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8476;ERATE=0.0004;THETA=0.0034;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27571602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27571691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27571900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.988;LDAF=0.5607;AVGPOST=0.9934;RSQ=0.9894;ERATE=0.0004;THETA=0.0042;AC=1224;AN=2184 GT:DS:GL:BD 0.56043959 1
1 27571902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3931;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0004;THETA=0.0009;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 27571920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3755;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0004;THETA=0.0013;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 27571956 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3934;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0010;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 27572043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27572070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27572093 rs34011216 GC G 41888 PASS INDEL;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3185;AVGPOST=0.9925;RSQ=0.9880;ERATE=0.0010;THETA=0.0009;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 27572124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4968;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27572196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27572259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5279;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27572266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0181;AVGPOST=0.9993;RSQ=0.9843;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27572291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27572304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9202;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27572343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5902;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27572399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3864;AVGPOST=0.9944;RSQ=0.9906;ERATE=0.0011;THETA=0.0003;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 27572600 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27572655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5986;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0006;THETA=0.0004;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 27572661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6041;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27572767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.7941;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27572838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0521;AVGPOST=0.9988;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 27572859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3178;AVGPOST=0.9941;RSQ=0.9902;ERATE=0.0006;THETA=0.0003;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 27572860 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7041;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27572873 . A AG 844 PASS INDEL;BAVGPOST=0.994;BRSQ=0.779;LDAF=0.0138;AVGPOST=0.9928;RSQ=0.7803;ERATE=0.0006;THETA=0.0012;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27572993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0109;AVGPOST=0.9996;RSQ=0.9825;ERATE=0.0003;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27573101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7797;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27573290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0376;AVGPOST=0.9977;RSQ=0.9760;ERATE=0.0005;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 27573416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0280;AVGPOST=0.9996;RSQ=0.9933;ERATE=0.0004;THETA=0.0011;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27573709 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27573730 . C CT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27573762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27573770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27573849 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8592;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27574075 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6819;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27574083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27574117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27574163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27574202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5621;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27574466 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27574486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27574504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27574509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9976;RSQ=0.9687;ERATE=0.0003;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 27574600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5574;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27574638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27574755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9565;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27574788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27574813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27574873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9603;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27574976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0105;AVGPOST=0.9968;RSQ=0.8708;ERATE=0.0006;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27575005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9083;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27575060 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27575077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7621;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27575189 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27575309 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27575391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9462;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27575406 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27575484 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9992;RSQ=0.9830;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27575493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0005;THETA=0.0010;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 27575520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9343;ERATE=0.0003;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27575550 . A AT 5081 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0283;AVGPOST=0.9991;RSQ=0.9862;ERATE=0.0005;THETA=0.0012;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27575680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9984;RSQ=0.9454;ERATE=0.0004;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27575755 . TG T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5078;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27575766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9474;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27575894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5517;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27575919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9281;ERATE=0.0004;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27575983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27576172 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4787;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27576237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8508;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27576401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0045;AVGPOST=0.9953;RSQ=0.6257;ERATE=0.0005;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27576467 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27576471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8703;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27576503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27576579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27576669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7639;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27576809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27576843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27576859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27576981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27576998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0172;AVGPOST=0.9976;RSQ=0.9433;ERATE=0.0003;THETA=0.0013;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27577005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7676;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27577059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27577292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.786;LDAF=0.0141;AVGPOST=0.9881;RSQ=0.6557;ERATE=0.0011;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27577520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.611;LDAF=0.0088;AVGPOST=0.9901;RSQ=0.5377;ERATE=0.0010;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27577537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8402;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27577597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0237;AVGPOST=0.9983;RSQ=0.9748;ERATE=0.0005;THETA=0.0010;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 27577652 . A AT 20 PASS INDEL;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.5687;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27577673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3239;ERATE=0.0008;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27577686 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27577872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27577884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27577924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7015;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27577925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3785;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27578099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0005;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27578144 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5446;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27578226 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.7695;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27578263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27578326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1372;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 27578380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0072;AVGPOST=0.9988;RSQ=0.9229;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27578408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4734;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27578414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.898;LDAF=0.0180;AVGPOST=0.9952;RSQ=0.8957;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27578484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1373;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0022;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 27578506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0042;AVGPOST=0.9986;RSQ=0.8570;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27578650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27578738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4778;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27578883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7582;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27578916 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27578937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27578959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27579123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27579158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0063;AVGPOST=0.9974;RSQ=0.8444;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27579252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27579367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27579408 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6209;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27579477 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9149;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27579538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27579557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6536;AVGPOST=0.9931;RSQ=0.9894;ERATE=0.0008;THETA=0.0004;AC=1426;AN=2184 GT:DS:GL:BD 0.65293038 1
1 27579569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0299;AVGPOST=0.9984;RSQ=0.9776;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27579631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0150;AVGPOST=0.9992;RSQ=0.9777;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27579696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.7756;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27579741 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27580114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6732;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27580128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7880;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27580191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0302;AVGPOST=0.9994;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27580250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27580275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4383;AVGPOST=0.9971;RSQ=0.9957;ERATE=0.0005;THETA=0.0004;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 27580335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1545;AVGPOST=0.9971;RSQ=0.9915;ERATE=0.0006;THETA=0.0004;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 27580406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.919;LDAF=0.0130;AVGPOST=0.9959;RSQ=0.8930;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27580407 . AG A 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6733;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27580424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0075;AVGPOST=0.9968;RSQ=0.8245;ERATE=0.0008;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27580436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9012;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27580437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.897;LDAF=0.0175;AVGPOST=0.9939;RSQ=0.8860;ERATE=0.0011;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 27580438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8484;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27580439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5387;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27580616 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1312;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 27580743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27580782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27580856 . G GT 617 PASS INDEL;BAVGPOST=0.733;BRSQ=0.221;LDAF=0.2494;AVGPOST=0.7006;RSQ=0.3151;ERATE=0.0606;THETA=0.0002;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 27580930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1485;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0005;THETA=0.0002;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 27580945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27580952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.9967;AVGPOST=0.9987;RSQ=0.8659;ERATE=0.0003;THETA=0.0006;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 27581047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0297;AVGPOST=0.9990;RSQ=0.9877;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 27581234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1350;AVGPOST=0.9967;RSQ=0.9891;ERATE=0.0005;THETA=0.0002;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 27581243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27581427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27581443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0286;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27581460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27581464 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27581507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27581598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0047;AVGPOST=0.9993;RSQ=0.9349;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27581645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27581650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.6688;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27581747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0122;AVGPOST=0.9983;RSQ=0.9541;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27581901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27581923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8509;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27582005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27582093 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9424;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27582125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5713;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27582156 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4330;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27582267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0163;AVGPOST=0.9993;RSQ=0.9819;ERATE=0.0004;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27582277 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7542;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27582524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0040;AVGPOST=0.9964;RSQ=0.6070;ERATE=0.0013;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27582531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5699;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27582547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5609;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27582552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.8310;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27582595 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.6260;AVGPOST=0.9931;RSQ=0.9893;ERATE=0.0010;THETA=0.0003;AC=1365;AN=2184 GT:DS:GL:BD 0.62500000 1
1 27582625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7986;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27582648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4233;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27582673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0161;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27582793 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6188;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27582832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27582853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4846;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27582858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27582868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27582920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.660;LDAF=0.0048;AVGPOST=0.9965;RSQ=0.7340;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27582973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27583097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.9878;AVGPOST=0.9985;RSQ=0.9463;ERATE=0.0005;THETA=0.0029;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 27583276 . CCGCT C 841 PASS INDEL;BAVGPOST=0.996;BRSQ=0.726;LDAF=0.0082;AVGPOST=0.9946;RSQ=0.6905;ERATE=0.0007;THETA=0.0033;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27583288 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9014;ERATE=0.0004;THETA=0.0055;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27583304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27583338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6732;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27583378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27583436 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9873;ERATE=0.0003;THETA=0.0031;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27583498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8785;AVGPOST=0.9938;RSQ=0.9745;ERATE=0.0005;THETA=0.0006;AC=1922;AN=2184 GT:DS:GL:BD 0.88003665 1
1 27583500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27583528 . C CA 553 PASS INDEL;BAVGPOST=0.981;BRSQ=0.682;LDAF=0.0398;AVGPOST=0.9640;RSQ=0.5997;ERATE=0.0059;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 27583657 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.958;LDAF=0.3848;AVGPOST=0.9845;RSQ=0.9773;ERATE=0.0006;THETA=0.0008;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 27583666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1991;AVGPOST=0.9929;RSQ=0.9825;ERATE=0.0007;THETA=0.0004;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 27583698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.774;LDAF=0.0063;AVGPOST=0.9976;RSQ=0.8477;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27583699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0004;THETA=0.0039;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27583729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0149;AVGPOST=0.9982;RSQ=0.9499;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27583785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.973;LDAF=0.2199;AVGPOST=0.9944;RSQ=0.9882;ERATE=0.0004;THETA=0.0003;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 27583883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27583925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2542;AVGPOST=0.9970;RSQ=0.9938;ERATE=0.0005;THETA=0.0003;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 27583957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0085;AVGPOST=0.9954;RSQ=0.8003;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27583983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6851;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27584023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0670;AVGPOST=0.9980;RSQ=0.9863;ERATE=0.0004;THETA=0.0003;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 27584045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27584067 . TCTC T 797 PASS INDEL;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0076;AVGPOST=0.9964;RSQ=0.8260;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27584076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1802;AVGPOST=0.9978;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 27584103 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27584149 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9367;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27584153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27584161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0165;AVGPOST=0.9991;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27584247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2080;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0005;THETA=0.0014;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 27584250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4620;AVGPOST=0.9946;RSQ=0.9919;ERATE=0.0004;THETA=0.0005;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 27584260 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27584287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8927;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27584361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.6270;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27584387 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9553;ERATE=0.0003;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27584390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27584395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27584443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2390;AVGPOST=0.9970;RSQ=0.9937;ERATE=0.0006;THETA=0.0004;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 27584485 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27584505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9769;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27584511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8760;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27584513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9713;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27584547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0052;AVGPOST=0.9958;RSQ=0.6804;ERATE=0.0011;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27584629 rs34618821 AC A 402 PASS INDEL;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0055;AVGPOST=0.9986;RSQ=0.8932;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27584658 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.700;LDAF=0.0050;AVGPOST=0.9971;RSQ=0.7861;ERATE=0.0006;THETA=0.0024;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27584757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4164;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27584758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3897;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27584777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6644;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27584791 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8334;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27584859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9425;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27584907 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0350;AVGPOST=0.9992;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 27584985 rs113356137 C CTGTAG 7491 PASS INDEL;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0200;AVGPOST=0.9988;RSQ=0.9769;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 27585021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7688;ERATE=0.0003;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27585052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0145;AVGPOST=0.9990;RSQ=0.9696;ERATE=0.0005;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27585054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.5297;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27585107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1128;AVGPOST=0.9962;RSQ=0.9862;ERATE=0.0004;THETA=0.0004;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 27585244 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.641;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8797;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27585400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8594;AVGPOST=0.9942;RSQ=0.9806;ERATE=0.0008;THETA=0.0003;AC=1878;AN=2184 GT:DS:GL:BD 0.85989010 1
1 27585402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0665;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 27585481 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27585660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8681;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27585715 . ATACTC A 786 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9499;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27585740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0084;AVGPOST=0.9979;RSQ=0.8949;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27585836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9174;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27585841 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6625;AVGPOST=0.9963;RSQ=0.9929;ERATE=0.0007;THETA=0.0003;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 27585876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27585881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0632;AVGPOST=0.9984;RSQ=0.9890;ERATE=0.0004;THETA=0.0003;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 27585888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7076;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27585927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9188;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27586041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6469;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27586060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0145;AVGPOST=0.9976;RSQ=0.9327;ERATE=0.0011;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27586096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27586187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9107;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27586193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0013;AVGPOST=0.9979;RSQ=0.3571;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27586228 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.9029;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27586278 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0235;AVGPOST=0.9991;RSQ=0.9846;ERATE=0.0004;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27586284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27586352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7326;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27586354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8222;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27586374 . C CAATA 35086 PASS INDEL;BAVGPOST=0.919;BRSQ=0.860;LDAF=0.4453;AVGPOST=0.8729;RSQ=0.8126;ERATE=0.0347;THETA=0.0004;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 27586474 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5134;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27586514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9512;AVGPOST=0.9992;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 27586576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27586749 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9429;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27586769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8624;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27586770 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9805;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27586781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0151;AVGPOST=0.9991;RSQ=0.9828;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27586848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27586916 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8574;AVGPOST=0.9976;RSQ=0.9917;ERATE=0.0006;THETA=0.0004;AC=1873;AN=2184 GT:DS:GL:BD 0.85760075 1
1 27586946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8332;AVGPOST=0.9919;RSQ=0.9774;ERATE=0.0038;THETA=0.0008;AC=1819;AN=2184 GT:DS:GL:BD 0.83287543 1
1 27587068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8307;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27587079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7159;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27587080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9145;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27587147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27587188 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27587199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27587349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0077;AVGPOST=0.9994;RSQ=0.9716;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27587447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0009;AVGPOST=0.9985;RSQ=0.3188;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27587478 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0137;AVGPOST=0.9995;RSQ=0.9855;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27587616 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.672;LDAF=0.0329;AVGPOST=0.9697;RSQ=0.6336;ERATE=0.0171;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 27587789 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8829;AVGPOST=0.9975;RSQ=0.9903;ERATE=0.0004;THETA=0.0019;AC=1927;AN=2184 GT:DS:GL:BD 0.88232601 1
1 27587790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6550;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27587908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3795;AVGPOST=0.9937;RSQ=0.9896;ERATE=0.0005;THETA=0.0004;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 27587983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5985;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27587986 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.6996;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27588040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1392;AVGPOST=0.9970;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 27588130 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0003;THETA=0.0041;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27588141 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4905;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27588316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27588529 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27588579 . AT A 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4303;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27588645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0312;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 27588856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6159;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27588962 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27588985 . GGA G 4436 PASS INDEL;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0290;AVGPOST=0.9950;RSQ=0.9266;ERATE=0.0003;THETA=0.0032;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27589071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5729;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27589117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27589148 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27589167 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27589168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27589235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27589371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27589466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27589496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8460;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27589555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27589566 . GC G 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27589567 . CA C 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7444;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27589571 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27589626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0093;AVGPOST=0.9961;RSQ=0.8354;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27589952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0055;AVGPOST=0.9985;RSQ=0.8951;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27590083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0500;AVGPOST=0.9958;RSQ=0.9658;ERATE=0.0003;THETA=0.0015;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 27590137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27590266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.971;LDAF=0.2217;AVGPOST=0.9806;RSQ=0.9582;ERATE=0.0027;THETA=0.0039;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 27590577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9345;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27590643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8840;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27590715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.907;LDAF=0.0207;AVGPOST=0.9955;RSQ=0.9170;ERATE=0.0004;THETA=0.0094;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 27590720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27590867 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27590926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.921;LDAF=0.0586;AVGPOST=0.9834;RSQ=0.8852;ERATE=0.0020;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 27591051 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.921;LDAF=0.0571;AVGPOST=0.9846;RSQ=0.8908;ERATE=0.0004;THETA=0.0149;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 27591057 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1488;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0003;THETA=0.0013;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 27591233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8579;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27591368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8598;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27591451 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.966;LDAF=0.0607;AVGPOST=0.9969;RSQ=0.9786;ERATE=0.0005;THETA=0.0005;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 27591491 rs71003222 G GTTCAAGTGA 10446 PASS INDEL;BAVGPOST=0.876;BRSQ=0.553;LDAF=0.1285;AVGPOST=0.8931;RSQ=0.6600;ERATE=0.0078;THETA=0.0055;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 27591520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0152;AVGPOST=0.9947;RSQ=0.8694;ERATE=0.0006;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27591605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8081;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27591684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0157;AVGPOST=0.9934;RSQ=0.8457;ERATE=0.0006;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27591701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.956;LDAF=0.2120;AVGPOST=0.9929;RSQ=0.9830;ERATE=0.0007;THETA=0.0022;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 27591727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.0639;AVGPOST=0.9966;RSQ=0.9786;ERATE=0.0004;THETA=0.0045;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 27591869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27591908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6684;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27592028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4809;AVGPOST=0.9948;RSQ=0.9913;ERATE=0.0008;THETA=0.0007;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 27592130 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27592144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8352;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27592201 rs34763423 GA G 12900 PASS INDEL;BAVGPOST=0.963;BRSQ=0.911;LDAF=0.2619;AVGPOST=0.9127;RSQ=0.8211;ERATE=0.0255;THETA=0.0008;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 27592276 . ATC A 91 PASS INDEL;BAVGPOST=0.987;BRSQ=0.561;LDAF=0.0267;AVGPOST=0.9663;RSQ=0.4867;ERATE=0.0081;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27592338 . GTA G 7220 PASS INDEL;BAVGPOST=0.959;BRSQ=0.827;LDAF=0.1441;AVGPOST=0.9377;RSQ=0.8035;ERATE=0.0120;THETA=0.0005;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 27592366 . ATG A 340 PASS INDEL;BAVGPOST=0.957;BRSQ=0.775;LDAF=0.1048;AVGPOST=0.9761;RSQ=0.9098;ERATE=0.0005;THETA=0.0006;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 27592378 rs71003224 C CAA 8 PASS INDEL;BAVGPOST=0.989;BRSQ=0.317;LDAF=0.0188;AVGPOST=0.9745;RSQ=0.4699;ERATE=0.0024;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27592431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.569;LDAF=0.0287;AVGPOST=0.9740;RSQ=0.6363;ERATE=0.0021;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27592461 . TACAC T 6850 PASS INDEL;BAVGPOST=0.926;BRSQ=0.614;LDAF=0.1383;AVGPOST=0.8832;RSQ=0.5812;ERATE=0.0271;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 27592461 . TAC T 22949 PASS INDEL;BAVGPOST=0.948;BRSQ=0.903;LDAF=0.4649;AVGPOST=0.9149;RSQ=0.8704;ERATE=0.0108;THETA=0.0033;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 27592480 . TAC T 12971 PASS INDEL;BAVGPOST=0.957;BRSQ=0.881;LDAF=0.2079;AVGPOST=0.9682;RSQ=0.9259;ERATE=0.0034;THETA=0.0005;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 27592497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.438;LDAF=0.1028;AVGPOST=0.8754;RSQ=0.4588;ERATE=0.0247;THETA=0.0018;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 27592499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.619;LDAF=0.0764;AVGPOST=0.9198;RSQ=0.5503;ERATE=0.0153;THETA=0.0008;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 27592516 . T TAC 423 PASS INDEL;BAVGPOST=0.975;BRSQ=0.488;LDAF=0.0386;AVGPOST=0.9516;RSQ=0.4830;ERATE=0.0064;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27592516 . TAC T 6422 PASS INDEL;BAVGPOST=0.896;BRSQ=0.779;LDAF=0.3041;AVGPOST=0.8262;RSQ=0.6946;ERATE=0.0316;THETA=0.0005;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 27592535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.534;LDAF=0.0837;AVGPOST=0.9022;RSQ=0.4906;ERATE=0.0168;THETA=0.0006;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 27592556 . CTA C 61 PASS INDEL;BAVGPOST=0.997;BRSQ=0.277;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4247;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27592564 . TAC T 556 PASS INDEL;BAVGPOST=0.958;BRSQ=0.432;LDAF=0.0661;AVGPOST=0.9245;RSQ=0.5114;ERATE=0.0074;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 27592573 . CTA C 939 PASS INDEL;BAVGPOST=0.971;BRSQ=0.514;LDAF=0.0475;AVGPOST=0.9567;RSQ=0.6123;ERATE=0.0090;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 27592602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0055;AVGPOST=0.9966;RSQ=0.7607;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27592680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27593078 rs35581666 GCT G 3989 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0261;AVGPOST=0.9986;RSQ=0.9778;ERATE=0.0005;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27593143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0144;AVGPOST=0.9970;RSQ=0.9129;ERATE=0.0006;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27593181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27593351 . TC T 4751 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0375;AVGPOST=0.9985;RSQ=0.9841;ERATE=0.0004;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 27593466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7286;AVGPOST=0.9969;RSQ=0.9945;ERATE=0.0005;THETA=0.0007;AC=1591;AN=2184 GT:DS:GL:BD 0.72847986 1
1 27593507 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6878;ERATE=0.0004;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27593575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0281;AVGPOST=0.9991;RSQ=0.9875;ERATE=0.0004;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27593592 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9076;ERATE=0.0005;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27593655 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0455;AVGPOST=0.9988;RSQ=0.9899;ERATE=0.0003;THETA=0.0007;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 27593754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0090;AVGPOST=0.9968;RSQ=0.8401;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27593881 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5842;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27593972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7301;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 27594090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9135;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27594104 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27594466 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27594542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27594555 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6994;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0004;THETA=0.0006;AC=1527;AN=2184 GT:DS:GL:BD 0.69917583 1
1 27594612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27594623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27594717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6059;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27594774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7792;ERATE=0.0006;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27594914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9851;ERATE=0.0004;THETA=0.0021;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27595049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7851;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27595185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27595239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0552;AVGPOST=0.9974;RSQ=0.9812;ERATE=0.0004;THETA=0.0040;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 27595310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0093;AVGPOST=0.9984;RSQ=0.9331;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27595349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27595350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8736;ERATE=0.0014;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27595370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.961;LDAF=0.0865;AVGPOST=0.9922;RSQ=0.9654;ERATE=0.0004;THETA=0.0007;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 27595405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27595480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27595541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8773;ERATE=0.0004;THETA=0.0061;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27596035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.2641;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27596082 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7406;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27596096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5560;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27596282 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0116;AVGPOST=0.9975;RSQ=0.9150;ERATE=0.0004;THETA=0.0072;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27596383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6297;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27596423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27596443 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0004;THETA=0.0087;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27596536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0074;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27596544 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27596579 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.8147;ERATE=0.0009;THETA=0.0097;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27596596 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27596601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9151;ERATE=0.0004;THETA=0.0048;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27596672 . CG C 263 PASS INDEL;BAVGPOST=0.776;BRSQ=0.175;LDAF=0.1666;AVGPOST=0.7583;RSQ=0.2927;ERATE=0.0138;THETA=0.0054;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 27597064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7475;AVGPOST=0.9957;RSQ=0.9925;ERATE=0.0005;THETA=0.0007;AC=1632;AN=2184 GT:DS:GL:BD 0.74725276 1
1 27597205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27597221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8889;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27597225 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27597236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5887;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27597297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.7473;AVGPOST=0.9959;RSQ=0.9931;ERATE=0.0005;THETA=0.0019;AC=1632;AN=2184 GT:DS:GL:BD 0.74725276 1
1 27597333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5170;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27597338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9479;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27597341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6129;AVGPOST=0.9948;RSQ=0.9916;ERATE=0.0006;THETA=0.0003;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 27597357 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9104;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27597422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0421;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 27597445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27597470 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27597537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27597551 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27597643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7642;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27597651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27597746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0067;AVGPOST=0.9980;RSQ=0.8813;ERATE=0.0005;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27597750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 27597765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0238;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0004;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 27597830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0504;AVGPOST=0.9985;RSQ=0.9875;ERATE=0.0004;THETA=0.0028;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 27597844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7862;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27597847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7829;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27597861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27597877 . A ATTT 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27597898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7842;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27597919 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0419;AVGPOST=0.9987;RSQ=0.9874;ERATE=0.0004;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 27597995 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8332;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27598006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27598020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9418;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27598021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7384;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27598102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27598336 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8651;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27598386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27598397 . GC G 279 PASS INDEL;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7439;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27598545 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27598549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1111;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 27598570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0164;AVGPOST=0.9997;RSQ=0.9918;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27598582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=1.0000;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27598604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2053;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 27598622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7467;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27598633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8340;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27598651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27598684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27598725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27598752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27598827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27598955 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1411;AVGPOST=0.9964;RSQ=0.9879;ERATE=0.0006;THETA=0.0004;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 27599043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27599089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27599105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27599112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9166;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27599146 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27599248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8963;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27599263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9273;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27599410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9615;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27599411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27599451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27599490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0173;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27599506 . T TCAC 4725 PASS INDEL;BAVGPOST=0.986;BRSQ=0.936;LDAF=0.1187;AVGPOST=0.9960;RSQ=0.9840;ERATE=0.0005;THETA=0.0002;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 27599564 . C CCAA 12564 PASS INDEL;BAVGPOST=0.993;BRSQ=0.970;LDAF=0.1202;AVGPOST=0.9947;RSQ=0.9793;ERATE=0.0012;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 27599579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9399;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27599614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27599772 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2051;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 27599888 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0143;AVGPOST=0.9982;RSQ=0.9477;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27599919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5153;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27599933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.8946;ERATE=0.0004;THETA=0.0019;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27599961 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6600;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27599992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27600001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27600033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27600132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27600137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0061;AVGPOST=0.9974;RSQ=0.8245;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27600230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7043;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27600366 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1058;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0004;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 27600406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0050;AVGPOST=0.9993;RSQ=0.9476;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27600432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.471;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4513;ERATE=0.0012;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27600537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6439;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27600550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0539;AVGPOST=0.9983;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 27600611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7252;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27600760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7321;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27600814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27600819 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27600918 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9359;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27601087 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9322;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27601123 . A AT 623 PASS INDEL;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0066;AVGPOST=0.9970;RSQ=0.8640;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27601237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27601256 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27601456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27601511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27601526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27601712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0188;AVGPOST=0.9987;RSQ=0.9750;ERATE=0.0003;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27601713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.959;LDAF=0.9619;AVGPOST=0.9957;RSQ=0.9621;ERATE=0.0006;THETA=0.0002;AC=2103;AN=2184 GT:DS:GL:BD 0.96291208 1
1 27601855 . CAGTAGCAAGA C 1032 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27601915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1157;AVGPOST=0.9984;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 27602009 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8930;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27602138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0048;AVGPOST=0.9981;RSQ=0.8662;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27602282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2075;AVGPOST=0.9976;RSQ=0.9947;ERATE=0.0004;THETA=0.0006;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 27602421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27602494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7125;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27602497 rs35233156 AG A 910 PASS INDEL;BAVGPOST=0.992;BRSQ=0.969;LDAF=0.1104;AVGPOST=0.9923;RSQ=0.9711;ERATE=0.0005;THETA=0.0004;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 27602599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.1104;AVGPOST=0.9932;RSQ=0.9752;ERATE=0.0003;THETA=0.0002;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 27602601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.1106;AVGPOST=0.9936;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 27602602 rs34340550 C CT 5526 PASS INDEL;BAVGPOST=0.993;BRSQ=0.974;LDAF=0.1109;AVGPOST=0.9931;RSQ=0.9742;ERATE=0.0004;THETA=0.0059;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 27602602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7017;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27602618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9994;RSQ=0.9668;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27602622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27602635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5601;AVGPOST=0.9952;RSQ=0.9928;ERATE=0.0011;THETA=0.0012;AC=1220;AN=2184 GT:DS:GL:BD 0.55860806 1
1 27602666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1192;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 27602695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5718;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27602831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5600;AVGPOST=0.9922;RSQ=0.9892;ERATE=0.0009;THETA=0.0005;AC=1218;AN=2184 GT:DS:GL:BD 0.55769229 1
1 27602849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27602990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6826;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27603082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8416;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27603107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27603131 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27603146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27603165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27603187 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27603203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1125;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 27603206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8908;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27603279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7883;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27603331 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4350;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27603441 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9138;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27603455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8320;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27603468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0258;AVGPOST=0.9991;RSQ=0.9836;ERATE=0.0004;THETA=0.0012;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27603545 . C CA 1242 PASS INDEL;BAVGPOST=0.994;BRSQ=0.893;LDAF=0.0266;AVGPOST=0.9973;RSQ=0.9535;ERATE=0.0005;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 27603619 . AC A 809 PASS INDEL;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0266;AVGPOST=0.9988;RSQ=0.9788;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27603624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27603745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8746;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27603813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0021;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27603821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27603840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0353;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 27603923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0269;AVGPOST=0.9991;RSQ=0.9869;ERATE=0.0003;THETA=0.0009;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27603972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0267;AVGPOST=0.9993;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27603985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7999;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0004;THETA=0.0009;AC=1747;AN=2184 GT:DS:GL:BD 0.79990840 1
1 27604041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6770;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27604110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0256;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27604262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0256;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27604305 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6781;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27604332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27604346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0363;AVGPOST=0.9987;RSQ=0.9864;ERATE=0.0003;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 27604363 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0060;AVGPOST=0.9991;RSQ=0.9471;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27604563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27604589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27604621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5184;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27604651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9161;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27604720 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0267;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27604788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27604800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8937;ERATE=0.0003;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27604821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0274;AVGPOST=0.9991;RSQ=0.9870;ERATE=0.0003;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27604866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7882;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27604878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.959;LDAF=0.9293;AVGPOST=0.9947;RSQ=0.9690;ERATE=0.0004;THETA=0.0007;AC=2030;AN=2184 GT:DS:GL:BD 0.92948717 1
1 27604915 . AT A 6220 PASS INDEL;BAVGPOST=0.958;BRSQ=0.860;LDAF=0.1846;AVGPOST=0.9138;RSQ=0.7849;ERATE=0.0277;THETA=0.0005;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 27604962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4781;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27605015 . T TC 15091 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1364;AVGPOST=0.9969;RSQ=0.9897;ERATE=0.0006;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 27605031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27605048 . ACTTT A 562 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8717;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27605146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5523;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27605370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0272;AVGPOST=0.9957;RSQ=0.9395;ERATE=0.0004;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27605383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0291;AVGPOST=0.9990;RSQ=0.9847;ERATE=0.0004;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27605387 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0476;AVGPOST=0.9984;RSQ=0.9871;ERATE=0.0004;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 27605574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27605577 . TTTTCG T 1842 PASS INDEL;BAVGPOST=0.996;BRSQ=0.911;LDAF=0.0288;AVGPOST=0.9974;RSQ=0.9630;ERATE=0.0004;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27605593 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0260;AVGPOST=0.9987;RSQ=0.9769;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27605598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.902;LDAF=0.0257;AVGPOST=0.9989;RSQ=0.9805;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27605624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8340;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27605755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.5413;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27605796 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.906;LDAF=0.0280;AVGPOST=0.9967;RSQ=0.9546;ERATE=0.0007;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 27605848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.891;LDAF=0.0276;AVGPOST=0.9975;RSQ=0.9595;ERATE=0.0005;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27605857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0257;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27605884 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8568;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27605904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4851;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27605924 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27605957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27605986 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4748;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27606000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7813;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27606050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9989;RSQ=0.9796;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27606158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6648;AVGPOST=0.9915;RSQ=0.9861;ERATE=0.0014;THETA=0.0004;AC=1454;AN=2184 GT:DS:GL:BD 0.66575092 1
1 27606233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6960;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27606237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0266;AVGPOST=0.9988;RSQ=0.9826;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27606242 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27606287 . C CA 74 PASS INDEL;BAVGPOST=0.997;BRSQ=0.683;LDAF=0.0121;AVGPOST=0.9832;RSQ=0.5163;ERATE=0.0024;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27606379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0088;AVGPOST=0.9975;RSQ=0.8805;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27606584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0265;AVGPOST=0.9982;RSQ=0.9701;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27606623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4926;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27606657 . T TA 1539 PASS INDEL;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0257;AVGPOST=0.9992;RSQ=0.9843;ERATE=0.0004;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27606677 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27606696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27606898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9339;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27606900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0258;AVGPOST=0.9994;RSQ=0.9887;ERATE=0.0004;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27606923 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6413;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27606968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0314;AVGPOST=0.9984;RSQ=0.9834;ERATE=0.0005;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 27606981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27607008 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.6614;ERATE=0.0011;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27607021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27607067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27607093 . CG C 294 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.7909;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27607156 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27607157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0258;AVGPOST=0.9994;RSQ=0.9885;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27607187 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0159;AVGPOST=0.9977;RSQ=0.9573;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27607200 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.5980;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27607213 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27607243 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27607265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7910;ERATE=0.0010;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27607285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.9292;AVGPOST=0.9968;RSQ=0.9815;ERATE=0.0004;THETA=0.0022;AC=2028;AN=2184 GT:DS:GL:BD 0.92857140 1
1 27607310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27607319 . CTA C 2411 PASS INDEL;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0265;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27607332 . CCT C 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.4956;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27607383 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5925;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27607474 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27607508 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27607530 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9364;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27607549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0327;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0003;THETA=0.0009;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 27607554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27607573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27607597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27607606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27607633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27607727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27607730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27607745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.8104;AVGPOST=0.9846;RSQ=0.9665;ERATE=0.0075;THETA=0.0013;AC=1777;AN=2184 GT:DS:GL:BD 0.81364471 1
1 27607795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9117;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27607803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.929;LDAF=0.0347;AVGPOST=0.9979;RSQ=0.9774;ERATE=0.0004;THETA=0.0016;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 27607823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0149;AVGPOST=0.9980;RSQ=0.9487;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27607836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.945;LDAF=0.0319;AVGPOST=0.9944;RSQ=0.9357;ERATE=0.0010;THETA=0.0011;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27607919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0109;AVGPOST=0.9963;RSQ=0.8568;ERATE=0.0010;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27607989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4217;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27608054 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0068;AVGPOST=0.9984;RSQ=0.8846;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27608292 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27608410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0589;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 27608564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8624;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27608625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27608665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0009;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27608776 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0459;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 27608807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27608869 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27608991 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27609099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27609125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.778;LDAF=0.9896;AVGPOST=0.9955;RSQ=0.8356;ERATE=0.0008;THETA=0.0003;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 27609140 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.6674;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27609181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0411;AVGPOST=0.9991;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 27609276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0023;AVGPOST=0.9970;RSQ=0.5203;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27609491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.884;LDAF=0.0334;AVGPOST=0.9797;RSQ=0.7698;ERATE=0.0048;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27609561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.803;LDAF=0.1771;AVGPOST=0.9128;RSQ=0.7329;ERATE=0.0743;THETA=0.0004;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 27609562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27609585 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27609654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2348;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0003;THETA=0.0012;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 27609689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0460;AVGPOST=0.9992;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 27609708 . A AC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3919;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27609771 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27609859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0412;AVGPOST=0.9988;RSQ=0.9870;ERATE=0.0004;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 27609919 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27610174 . TCAAA T 2552 PASS INDEL;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0380;AVGPOST=0.9933;RSQ=0.9359;ERATE=0.0023;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 27610198 rs72388007 CAAACA C 9299 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0329;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 27610207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6533;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27610254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0168;AVGPOST=0.9940;RSQ=0.8531;ERATE=0.0011;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27610302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27610398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27610479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5043;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27610670 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27610885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7729;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27610971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.905;LDAF=0.0363;AVGPOST=0.9910;RSQ=0.9193;ERATE=0.0006;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 27610995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6236;AVGPOST=0.9957;RSQ=0.9938;ERATE=0.0015;THETA=0.0004;AC=1362;AN=2184 GT:DS:GL:BD 0.62362635 1
1 27611156 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.837;LDAF=0.0087;AVGPOST=0.9966;RSQ=0.8572;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27611166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0254;AVGPOST=0.9989;RSQ=0.9812;ERATE=0.0004;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 27611251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8450;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27611410 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7899;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27611438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27611463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9114;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27611505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27611538 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.944;LDAF=0.0511;AVGPOST=0.9924;RSQ=0.9394;ERATE=0.0009;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 27611615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8506;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27611670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2046;AVGPOST=0.9973;RSQ=0.9939;ERATE=0.0005;THETA=0.0004;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 27611770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27611898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27611917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8067;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27611997 . ACT A 1080 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9237;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27612082 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0252;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 27612131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0507;AVGPOST=0.9978;RSQ=0.9811;ERATE=0.0005;THETA=0.0002;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 27612256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0584;AVGPOST=0.9993;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 27612284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2299;AVGPOST=0.9956;RSQ=0.9922;ERATE=0.0003;THETA=0.0009;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 27612454 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.2891;AVGPOST=0.9934;RSQ=0.9894;ERATE=0.0007;THETA=0.0004;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 27612457 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2040;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 27612526 . GTTTAAAC G 397 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0042;AVGPOST=0.9950;RSQ=0.5622;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27612758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0164;AVGPOST=0.9992;RSQ=0.9811;ERATE=0.0004;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27612808 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5156;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27612996 . TCTC T 99 PASS INDEL;BAVGPOST=0.989;BRSQ=0.525;LDAF=0.0292;AVGPOST=0.9610;RSQ=0.4418;ERATE=0.0076;THETA=0.0043;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27613015 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27613204 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9875;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27613235 . T TC 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7211;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27613313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9819;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0042;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 27613686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6678;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0012;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 27613693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8672;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27613796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27613808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27613835 . T TC 150 PASS INDEL;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0055;AVGPOST=0.9978;RSQ=0.8534;ERATE=0.0006;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27613891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.815;LDAF=0.0830;AVGPOST=0.9855;RSQ=0.9265;ERATE=0.0005;THETA=0.0006;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 27613902 . T TC 4626 PASS INDEL;BAVGPOST=0.983;BRSQ=0.911;LDAF=0.0972;AVGPOST=0.9960;RSQ=0.9821;ERATE=0.0005;THETA=0.0013;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 27613902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.5297;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27613959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1271;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0005;THETA=0.0007;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 27613993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.371;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5124;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27614081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0393;AVGPOST=0.9991;RSQ=0.9891;ERATE=0.0004;THETA=0.0006;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 27614083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0981;AVGPOST=0.9968;RSQ=0.9860;ERATE=0.0005;THETA=0.0035;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 27614163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.935;LDAF=0.5579;AVGPOST=0.9714;RSQ=0.9597;ERATE=0.0025;THETA=0.0003;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 27614176 . G GAGTAA 698 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8898;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27614205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0366;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 27614338 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5719;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27614352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0390;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0003;THETA=0.0007;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 27614385 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27614658 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0160;AVGPOST=0.9995;RSQ=0.9857;ERATE=0.0003;THETA=0.0013;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27614914 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0092;AVGPOST=0.9994;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27614958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6680;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=1457;AN=2184 GT:DS:GL:BD 0.66712457 1
1 27614972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6576;ERATE=0.0003;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27615112 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0035;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27615183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7005;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27615336 . G GA 430 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27615456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7908;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27615518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0383;AVGPOST=0.9979;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 27615535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.948;LDAF=0.0978;AVGPOST=0.9960;RSQ=0.9823;ERATE=0.0008;THETA=0.0014;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 27615736 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.790;LDAF=0.0394;AVGPOST=0.9873;RSQ=0.8747;ERATE=0.0008;THETA=0.0051;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 27615832 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.779;LDAF=0.1327;AVGPOST=0.9229;RSQ=0.7281;ERATE=0.0185;THETA=0.0008;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 27615852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0034;AVGPOST=0.9954;RSQ=0.4986;ERATE=0.0009;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27615974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0972;AVGPOST=0.9972;RSQ=0.9878;ERATE=0.0003;THETA=0.0023;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 27615985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5247;ERATE=0.0005;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27616086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0064;AVGPOST=0.9955;RSQ=0.7089;ERATE=0.0004;THETA=0.0025;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27616134 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3391;ERATE=0.0006;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27616392 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.688;LDAF=0.0517;AVGPOST=0.9637;RSQ=0.7149;ERATE=0.0015;THETA=0.0080;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 27616449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27616623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7131;ERATE=0.0004;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27616629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0071;AVGPOST=0.9982;RSQ=0.9026;ERATE=0.0003;THETA=0.0022;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27616657 . ACTT A 44 PASS INDEL;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0114;AVGPOST=0.9954;RSQ=0.8474;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27616834 . CTTCTT C 1848 PASS INDEL;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0117;AVGPOST=0.9967;RSQ=0.8847;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27616835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7906;ERATE=0.0003;THETA=0.0071;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27616838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.836;LDAF=0.0254;AVGPOST=0.9939;RSQ=0.9003;ERATE=0.0005;THETA=0.0026;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 27616967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6392;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27617099 . T TTTAA 202 PASS INDEL;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0061;AVGPOST=0.9928;RSQ=0.5399;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27617163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27617254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0088;AVGPOST=0.9980;RSQ=0.9229;ERATE=0.0003;THETA=0.0037;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27617332 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27617452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9747;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0003;THETA=0.0014;AC=2129;AN=2184 GT:DS:GL:BD 0.97481686 1
1 27617494 . CAT C 276 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27617577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0380;AVGPOST=0.9979;RSQ=0.9789;ERATE=0.0004;THETA=0.0037;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 27617580 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27617616 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.9450;AVGPOST=0.9947;RSQ=0.9649;ERATE=0.0005;THETA=0.0010;AC=2067;AN=2184 GT:DS:GL:BD 0.94642860 1
1 27617818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.967;LDAF=0.1123;AVGPOST=0.9921;RSQ=0.9677;ERATE=0.0008;THETA=0.0111;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 27617852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.927;LDAF=0.9321;AVGPOST=0.9733;RSQ=0.8491;ERATE=0.0026;THETA=0.0090;AC=2052;AN=2184 GT:DS:GL:BD 0.93956041 1
1 27617908 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.628;LDAF=0.0053;AVGPOST=0.9970;RSQ=0.7526;ERATE=0.0008;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27617969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.558;LDAF=0.0031;AVGPOST=0.9957;RSQ=0.3929;ERATE=0.0005;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27618005 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0340;AVGPOST=0.9922;RSQ=0.9178;ERATE=0.0006;THETA=0.0008;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 27618037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.566;LDAF=0.0091;AVGPOST=0.9907;RSQ=0.6098;ERATE=0.0009;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27618057 rs111748714 T TGAGGCAG 37770 PASS INDEL;BAVGPOST=0.960;BRSQ=0.353;LDAF=0.9140;AVGPOST=0.8856;RSQ=0.4387;ERATE=0.0069;THETA=0.0046;AC=2060;AN=2184 GT:DS:GL:BD 0.94322342 1
1 27618141 . A AGGCAGGG 17120 PASS INDEL;BAVGPOST=0.655;BRSQ=0.205;LDAF=0.6510;AVGPOST=0.6636;RSQ=0.3278;ERATE=0.0693;THETA=0.0047;AC=1611;AN=2184 GT:DS:GL:BD 0.73763734 1
1 27618143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0160;AVGPOST=0.9865;RSQ=0.6872;ERATE=0.0006;THETA=0.0060;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27618167 rs71014198 CAA C 139 PASS INDEL;BAVGPOST=0.811;BRSQ=0.102;LDAF=0.1996;AVGPOST=0.7199;RSQ=0.2753;ERATE=0.0190;THETA=0.0058;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 27618238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.842;LDAF=0.9354;AVGPOST=0.9654;RSQ=0.7919;ERATE=0.0027;THETA=0.0006;AC=2063;AN=2184 GT:DS:GL:BD 0.94459707 1
1 27618281 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4116;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27618390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0998;AVGPOST=0.9954;RSQ=0.9807;ERATE=0.0004;THETA=0.0012;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 27618393 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5837;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27618537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0098;AVGPOST=0.9984;RSQ=0.9317;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27618617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0028;AVGPOST=0.9964;RSQ=0.5082;ERATE=0.0004;THETA=0.0055;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27618685 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9739;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=2127;AN=2184 GT:DS:GL:BD 0.97390109 1
1 27618779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6359;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27618838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9278;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27618840 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.6106;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27618849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2066;AVGPOST=0.9945;RSQ=0.9880;ERATE=0.0013;THETA=0.0008;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 27619191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6008;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27619434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0130;AVGPOST=0.9989;RSQ=0.9688;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27619435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2986;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 27619634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2984;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 27619704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6582;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27619868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6870;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27619909 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6994;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27619977 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9565;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27619999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27620036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27620060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8007;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27620151 . TCAGA T 241 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27620230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4459;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27620379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9331;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27620510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27620609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4468;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27620621 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0017;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27620807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9476;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27620821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2059;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 27620826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27620969 rs35140766 CTG C 34293 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2973;AVGPOST=0.9955;RSQ=0.9931;ERATE=0.0005;THETA=0.0005;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 27620979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5776;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27621083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8909;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27621195 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27621218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4527;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0007;THETA=0.0004;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 27621221 . AG A 1109 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27621237 . GT G 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7033;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27621245 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7097;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27621258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27621292 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9737;AVGPOST=0.9993;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=2127;AN=2184 GT:DS:GL:BD 0.97390109 1
1 27621378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27621393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27621424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.7028;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27621588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27621799 . AC A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7116;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27621815 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27621837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5808;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27621905 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4530;AVGPOST=0.9982;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 27621935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27622123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9224;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27622185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7123;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27622224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0065;AVGPOST=0.9991;RSQ=0.9448;ERATE=0.0003;THETA=0.0024;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27622288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27622332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7529;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27622666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0310;AVGPOST=0.9982;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27622761 . GC G 127 PASS INDEL;BAVGPOST=0.950;BRSQ=0.420;LDAF=0.0427;AVGPOST=0.9545;RSQ=0.5906;ERATE=0.0017;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 27622827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27622874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7393;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27623160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2977;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 27623162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5376;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27623193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0104;AVGPOST=0.9978;RSQ=0.9047;ERATE=0.0005;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27623352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.632;LDAF=0.0072;AVGPOST=0.9938;RSQ=0.6248;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27623420 . CT C 21383 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1487;AVGPOST=0.9976;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 27623711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0459;AVGPOST=0.9968;RSQ=0.9725;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 27623758 . GC G 251 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7602;ERATE=0.0009;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27623850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27623931 . C CA 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0077;AVGPOST=0.9900;RSQ=0.4878;ERATE=0.0012;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27623949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9997;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27624175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27624223 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27624379 . CCT C 1437 PASS INDEL;BAVGPOST=0.945;BRSQ=0.721;LDAF=0.1260;AVGPOST=0.9199;RSQ=0.7163;ERATE=0.0087;THETA=0.0005;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 27624772 . CT C 4484 PASS INDEL;BAVGPOST=0.824;BRSQ=0.462;LDAF=0.2327;AVGPOST=0.7864;RSQ=0.5258;ERATE=0.0282;THETA=0.0003;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 27624773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27624850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5144;AVGPOST=0.9970;RSQ=0.9960;ERATE=0.0004;THETA=0.0009;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 27624871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27625061 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6694;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27625064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5471;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27625262 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27625328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27625592 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7433;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27625655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27625753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9595;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27625860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27625861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27625984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6445;AVGPOST=0.9945;RSQ=0.9914;ERATE=0.0004;THETA=0.0009;AC=1409;AN=2184 GT:DS:GL:BD 0.64514655 1
1 27626101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27626108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9668;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27626180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27626278 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4878;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27626282 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9323;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27626351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6887;ERATE=0.0015;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27626405 . TTC T 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5099;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27626461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8291;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27626516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27626542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27626546 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7149;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27626633 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4733;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27626941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6243;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27626958 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6145;ERATE=0.0008;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27627020 . G GC 253 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7604;ERATE=0.0007;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27627033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6151;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27627105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27627202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7026;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27627441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0378;AVGPOST=0.9981;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 27627446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27627651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8665;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27627822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6259;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27627861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.867;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9163;ERATE=0.0006;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27627953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9991;AVGPOST=0.9995;RSQ=0.7370;ERATE=0.0003;THETA=0.0007;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 27627957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0419;AVGPOST=0.9980;RSQ=0.9804;ERATE=0.0003;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 27627972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0898;AVGPOST=0.9973;RSQ=0.9843;ERATE=0.0007;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 27628011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7879;ERATE=0.0005;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27628025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6257;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27628068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7938;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27628155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7791;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27628204 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0894;AVGPOST=0.9985;RSQ=0.9918;ERATE=0.0003;THETA=0.0009;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 27628404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.494;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5039;ERATE=0.0010;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27628409 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27628488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0413;AVGPOST=0.9987;RSQ=0.9867;ERATE=0.0004;THETA=0.0007;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 27628506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27628509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8529;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27628555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0236;AVGPOST=0.9980;RSQ=0.9691;ERATE=0.0004;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27628617 rs3218133 A ACCCCAT 785 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9119;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27628683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27628730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6096;ERATE=0.0005;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27628774 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27628810 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6769;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27628994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27628995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27629139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0084;AVGPOST=0.9976;RSQ=0.8972;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27629219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.789;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8743;ERATE=0.0007;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27629294 . C CT 138 PASS INDEL;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.6957;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27629439 rs113328642 T TTAA 5564 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0285;AVGPOST=0.9989;RSQ=0.9873;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27629478 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27629687 . AAC A 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27630087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27630170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27630233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27630371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0280;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27630387 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0066;AVGPOST=0.9991;RSQ=0.9378;ERATE=0.0005;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27630630 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27630692 . T TCCC 247 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4908;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27630746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27631018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27631184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27631266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9870;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27631276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7394;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27631277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27631299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0327;AVGPOST=0.9989;RSQ=0.9864;ERATE=0.0003;THETA=0.0009;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 27631406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27631539 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0081;AVGPOST=0.9983;RSQ=0.9150;ERATE=0.0010;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27631559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27631569 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27631649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27631873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27631922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27631924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27632010 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27632164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27632176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7049;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27632218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0306;AVGPOST=0.9989;RSQ=0.9871;ERATE=0.0004;THETA=0.0023;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27632313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5518;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27632432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27632439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27632505 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0379;AVGPOST=0.9992;RSQ=0.9917;ERATE=0.0004;THETA=0.0010;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 27632525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27632650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9775;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27632685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27632720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9689;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27632771 . CTA C 317 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0056;AVGPOST=0.9966;RSQ=0.7714;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27632774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27632778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27632821 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27632839 . CAAG C 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27632915 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27633042 . TA T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5008;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27633194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0367;AVGPOST=0.9988;RSQ=0.9866;ERATE=0.0003;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 27633267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27633349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27633456 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0106;AVGPOST=0.9984;RSQ=0.9366;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27633706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8366;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27633715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27634153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27634154 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0108;AVGPOST=0.9971;RSQ=0.8919;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27634222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7578;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27634329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0067;AVGPOST=0.9935;RSQ=0.6055;ERATE=0.0009;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27634422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6295;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27634539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27634549 . ACTTT A 350 PASS INDEL;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8827;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27634553 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8097;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27634711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4038;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27634736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0041;AVGPOST=0.9978;RSQ=0.7848;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27634752 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6382;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27634793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27634859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27634931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1667;AVGPOST=0.9931;RSQ=0.9799;ERATE=0.0006;THETA=0.0006;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 27634948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0066;AVGPOST=0.9981;RSQ=0.8978;ERATE=0.0004;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27634988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5295;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27635004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0142;AVGPOST=0.9974;RSQ=0.9298;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27635039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27635302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27635355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3112;AVGPOST=0.9926;RSQ=0.9898;ERATE=0.0017;THETA=0.0026;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 27635458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6041;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27635615 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9666;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27635683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8602;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27635686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8261;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27635780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27635795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7619;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27635801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5717;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27635873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27635933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27636126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27636256 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2455;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 27636278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0082;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27636378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2373;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0005;THETA=0.0006;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 27636388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0128;AVGPOST=0.9954;RSQ=0.8809;ERATE=0.0009;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27636568 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5157;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27636577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6425;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27636669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 27636691 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2457;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 27636763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7118;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27636880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27636886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4097;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27636887 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2557;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0005;THETA=0.0009;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 27637211 . AC A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4261;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27637213 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27637280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27637394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27637415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27637639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8396;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27637664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27637711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27637774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8524;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27637892 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27638128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27638160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0286;AVGPOST=0.9985;RSQ=0.9803;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27638441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27638657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27638669 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27638720 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0456;AVGPOST=0.9984;RSQ=0.9887;ERATE=0.0003;THETA=0.0014;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 27638741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0213;AVGPOST=0.9987;RSQ=0.9778;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27638910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27638931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6992;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27638942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8185;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27638970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27638984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27639201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27639293 . A AG 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27639630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27639732 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27639754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0012;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27639781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27639856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0007;THETA=0.0012;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 27639894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6088;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27640229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.902;LDAF=0.0626;AVGPOST=0.9914;RSQ=0.9450;ERATE=0.0010;THETA=0.0019;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 27640243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8397;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27640256 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6625;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27640347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27640446 . G GGATTT 334 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27640453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0445;AVGPOST=0.9990;RSQ=0.9894;ERATE=0.0003;THETA=0.0015;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 27640534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.477;LDAF=0.0039;AVGPOST=0.9963;RSQ=0.5884;ERATE=0.0009;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27640717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0041;AVGPOST=0.9957;RSQ=0.6251;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27640718 . CAG C 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5241;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27641006 . A AT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5656;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27641156 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27641221 rs35444330 A AT 26 PASS INDEL;BAVGPOST=0.985;BRSQ=0.467;LDAF=0.0193;AVGPOST=0.9732;RSQ=0.4098;ERATE=0.0077;THETA=0.0019;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27641277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27641418 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27641546 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27641578 . A AT 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3975;ERATE=0.0006;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27641744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.683;LDAF=0.0043;AVGPOST=0.9958;RSQ=0.5541;ERATE=0.0019;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27641893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0106;AVGPOST=0.9941;RSQ=0.7692;ERATE=0.0005;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27641943 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0083;AVGPOST=0.9976;RSQ=0.8753;ERATE=0.0005;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27642076 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0055;AVGPOST=0.9962;RSQ=0.6992;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27642116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5828;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27642148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1259;AVGPOST=0.9813;RSQ=0.9364;ERATE=0.0007;THETA=0.0027;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 27642316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.0862;AVGPOST=0.9961;RSQ=0.9799;ERATE=0.0006;THETA=0.0012;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 27642318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5180;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27642575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27642667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0452;AVGPOST=0.9986;RSQ=0.9868;ERATE=0.0005;THETA=0.0009;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 27642765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27642956 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9505;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27642969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27642981 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27643008 . GGAA G 14 PASS INDEL;BAVGPOST=0.998;BRSQ=0.717;LDAF=0.0085;AVGPOST=0.9914;RSQ=0.5698;ERATE=0.0032;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27643381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27643406 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27643586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27643710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27643723 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27643724 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27643774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27643812 . T TG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3985;ERATE=0.0007;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27644036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27644039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27644052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27644174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0069;AVGPOST=0.9940;RSQ=0.6605;ERATE=0.0011;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27644293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27644311 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27644461 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0003;THETA=0.0010;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 27644614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27644655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27644790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27644882 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7274;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27644908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9672;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27645084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7564;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27645177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1132;AVGPOST=0.9981;RSQ=0.9931;ERATE=0.0005;THETA=0.0006;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 27645226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0199;AVGPOST=0.9994;RSQ=0.9858;ERATE=0.0003;THETA=0.0011;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27645238 . C CG 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5102;ERATE=0.0008;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27645333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7705;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27645341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8508;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27645371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1101;AVGPOST=0.9962;RSQ=0.9865;ERATE=0.0007;THETA=0.0007;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 27645372 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.672;LDAF=0.0045;AVGPOST=0.9951;RSQ=0.5653;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27645375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8179;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27645401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5486;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27645459 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6151;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27645573 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27645615 . CTG C 237 PASS INDEL;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8517;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27645783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0192;AVGPOST=0.9990;RSQ=0.9766;ERATE=0.0004;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27645926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0160;AVGPOST=0.9987;RSQ=0.9739;ERATE=0.0003;THETA=0.0018;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27645952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27645971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1047;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 27645973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0189;AVGPOST=0.9997;RSQ=0.9933;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27646081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4501;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27646111 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.5334;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27646169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27646199 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1044;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0009;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 27646352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27646414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0018;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27646834 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27646841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27647030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27647031 . TC T 110 PASS INDEL;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6104;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27647048 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0014;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27647221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0015;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27647225 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27647427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9525;ERATE=0.0004;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27647551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27647560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9691;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27647712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27647810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27648078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2160;AVGPOST=0.9977;RSQ=0.9952;ERATE=0.0005;THETA=0.0014;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 27648095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0193;AVGPOST=0.9988;RSQ=0.9699;ERATE=0.0005;THETA=0.0014;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27648234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.676;LDAF=0.0064;AVGPOST=0.9946;RSQ=0.6922;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27648338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27648652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0802;AVGPOST=0.9971;RSQ=0.9885;ERATE=0.0003;THETA=0.0012;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27648699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1097;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 27648931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27649060 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27649150 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0033;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27649199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27649234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27649248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0552;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0003;THETA=0.0012;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 27649271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27649301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7531;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27649379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7110;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27649406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0910;AVGPOST=0.9964;RSQ=0.9847;ERATE=0.0006;THETA=0.0011;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 27649415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4773;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27649440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8312;ERATE=0.0006;THETA=0.0045;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27649508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.830;LDAF=0.2390;AVGPOST=0.9163;RSQ=0.8357;ERATE=0.0100;THETA=0.0011;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 27649584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.832;LDAF=0.2457;AVGPOST=0.9256;RSQ=0.8564;ERATE=0.0068;THETA=0.0040;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 27649590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.740;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7048;ERATE=0.0010;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27649599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5503;ERATE=0.0010;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27649610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0116;AVGPOST=0.9949;RSQ=0.8459;ERATE=0.0007;THETA=0.0043;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27649626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.749;LDAF=0.0181;AVGPOST=0.9833;RSQ=0.6423;ERATE=0.0025;THETA=0.0049;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27649672 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0099;AVGPOST=0.9987;RSQ=0.9435;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27649693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.432;LDAF=0.0045;AVGPOST=0.9960;RSQ=0.6051;ERATE=0.0007;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27649747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.923;LDAF=0.0343;AVGPOST=0.9955;RSQ=0.9498;ERATE=0.0005;THETA=0.0010;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 27649870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.933;LDAF=0.0385;AVGPOST=0.9904;RSQ=0.9041;ERATE=0.0009;THETA=0.0010;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 27649899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0027;AVGPOST=0.9967;RSQ=0.4964;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27649956 . ATAT A 64 PASS INDEL;BAVGPOST=0.995;BRSQ=0.667;LDAF=0.0179;AVGPOST=0.9788;RSQ=0.5279;ERATE=0.0029;THETA=0.0034;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27649984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0063;AVGPOST=0.9987;RSQ=0.9081;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27650137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7947;ERATE=0.0003;THETA=0.0090;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27650153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.5901;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27650418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7268;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27650471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.9080;ERATE=0.0003;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27650499 . GATGACT G 567 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27650542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6273;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27650544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0901;AVGPOST=0.9982;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 27650560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7899;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27650754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9460;AVGPOST=0.9980;RSQ=0.9838;ERATE=0.0003;THETA=0.0016;AC=2067;AN=2184 GT:DS:GL:BD 0.94642860 1
1 27650773 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6745;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27650886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5711;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27650947 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8775;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27650990 . AG A 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6820;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27651025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8268;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27651063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27651070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27651222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27651375 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27651593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0908;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0034;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 27651691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6590;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27651961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0003;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27651977 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.8963;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27652100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27652223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1844;AVGPOST=0.9953;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 27652271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2421;AVGPOST=0.9925;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 27652287 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.5317;AVGPOST=0.9736;RSQ=0.9674;ERATE=0.0041;THETA=0.0004;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 27652315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.842;LDAF=0.0892;AVGPOST=0.9940;RSQ=0.9713;ERATE=0.0006;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 27652414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.558;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6988;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27652481 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0911;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0004;THETA=0.0006;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 27652652 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3730;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27652702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0910;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 27652838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6770;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27652876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.974;LDAF=0.0913;AVGPOST=0.9970;RSQ=0.9859;ERATE=0.0006;THETA=0.0006;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 27653242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9009;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27653278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0909;AVGPOST=0.9974;RSQ=0.9867;ERATE=0.0006;THETA=0.0002;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 27653279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6288;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27653303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0068;AVGPOST=0.9928;RSQ=0.5479;ERATE=0.0008;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27653463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.608;LDAF=0.0171;AVGPOST=0.9777;RSQ=0.5230;ERATE=0.0016;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27653472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0930;AVGPOST=0.9967;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 27653554 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8409;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27653570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6474;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27653577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7988;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27653578 . TG T 395 PASS INDEL;BAVGPOST=0.997;BRSQ=0.717;LDAF=0.0066;AVGPOST=0.9950;RSQ=0.6882;ERATE=0.0007;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27653584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27653662 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0910;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 27653685 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6789;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27653705 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0915;AVGPOST=0.9983;RSQ=0.9911;ERATE=0.0004;THETA=0.0008;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 27653823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0046;AVGPOST=0.9963;RSQ=0.6922;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27653844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.973;LDAF=0.0923;AVGPOST=0.9975;RSQ=0.9889;ERATE=0.0006;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 27653929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27654196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0912;AVGPOST=0.9990;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 27654197 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0314;AVGPOST=0.9993;RSQ=0.9889;ERATE=0.0003;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 27654223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9124;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27654233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4597;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27654320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9672;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27654327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27654389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5726;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=1252;AN=2184 GT:DS:GL:BD 0.57326007 1
1 27654425 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6658;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27654679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8902;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27654715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9465;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27654733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8211;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27654761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27654818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27654900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0279;AVGPOST=0.9992;RSQ=0.9878;ERATE=0.0003;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27654959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27654980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9508;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27655205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5733;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 27655211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.7420;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27655239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0809;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 27655447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4601;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27655536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8269;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27655580 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6039;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 27655592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0547;AVGPOST=0.9990;RSQ=0.9927;ERATE=0.0002;THETA=0.0010;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 27655600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27655607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8911;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27655636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.756;LDAF=0.0201;AVGPOST=0.9831;RSQ=0.6916;ERATE=0.0072;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27655674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6819;AVGPOST=0.9972;RSQ=0.9951;ERATE=0.0005;THETA=0.0002;AC=1491;AN=2184 GT:DS:GL:BD 0.68269229 1
1 27655675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27655682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27655732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5876;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27655884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27655905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9391;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27656082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27656192 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27656219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8799;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27656275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8855;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27656285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9815;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27656303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0806;AVGPOST=0.9976;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 27656344 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0069;AVGPOST=0.9994;RSQ=0.9587;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27656409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7049;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27656414 rs34492572 TCTGA T 1516 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0103;AVGPOST=0.9989;RSQ=0.9578;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27656445 . TA T 90 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27656489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6236;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27656674 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27656702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27656703 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0120;AVGPOST=0.9988;RSQ=0.9624;ERATE=0.0003;THETA=0.0014;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27656811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27656905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0073;AVGPOST=0.9987;RSQ=0.9288;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27656930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0108;AVGPOST=0.9982;RSQ=0.9401;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27657137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27657172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9316;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27657297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27657328 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0238;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 27657414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9676;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27657426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8316;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27657452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27657737 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5538;AVGPOST=0.9982;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 27657852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8255;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27657974 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8263;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27657979 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27658184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8338;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27658209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0117;AVGPOST=0.9993;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27658210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0556;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0003;THETA=0.0009;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 27658382 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9409;ERATE=0.0002;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27658521 . CCCAGT C 1257 PASS INDEL;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9422;ERATE=0.0004;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27658576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8392;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27658659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0063;AVGPOST=0.9971;RSQ=0.8182;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27658753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9096;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27658831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6310;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27658838 . C CA 9366 PASS INDEL;BAVGPOST=0.924;BRSQ=0.855;LDAF=0.5949;AVGPOST=0.8790;RSQ=0.8139;ERATE=0.0397;THETA=0.0006;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 27659058 rs112852893 A AT 68601 PASS INDEL;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.6787;AVGPOST=0.9904;RSQ=0.9841;ERATE=0.0008;THETA=0.0005;AC=1482;AN=2184 GT:DS:GL:BD 0.67857140 1
1 27659061 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5101;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27659158 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9988;RSQ=0.9581;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27659216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9476;ERATE=0.0003;THETA=0.0028;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27659257 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0158;AVGPOST=0.9991;RSQ=0.9756;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27659366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9180;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27659418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27659465 . GTC G 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0024;AVGPOST=0.9964;RSQ=0.4966;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27659667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6889;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27659718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8301;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27659928 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4979;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27659983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27660053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0157;AVGPOST=0.9994;RSQ=0.9834;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27660257 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8505;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27660618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.937;LDAF=0.1205;AVGPOST=0.9957;RSQ=0.9846;ERATE=0.0006;THETA=0.0003;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 27660890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1966;AVGPOST=0.9986;RSQ=0.9962;ERATE=0.0004;THETA=0.0011;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 27660969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27661098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.7958;AVGPOST=0.9865;RSQ=0.9699;ERATE=0.0012;THETA=0.0020;AC=1742;AN=2184 GT:DS:GL:BD 0.79761904 1
1 27661162 rs112546136 C CA 1224 PASS INDEL;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9776;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27661182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.2222;AVGPOST=0.9983;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 27661212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27661240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0340;AVGPOST=0.9964;RSQ=0.9590;ERATE=0.0004;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 27661244 . AAAAAG A 939 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9991;RSQ=0.9668;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27661385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0032;AVGPOST=0.9976;RSQ=0.7341;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27661475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8651;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27661613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9398;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27661685 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7781;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27661800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6531;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27661887 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.8919;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27661957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0123;AVGPOST=0.9991;RSQ=0.9724;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27662131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5776;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27662164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7389;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27662193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27662366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4489;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27662375 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6079;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27662429 . A AC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27662554 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.8031;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27662673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0113;AVGPOST=0.9984;RSQ=0.9419;ERATE=0.0005;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27662710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8552;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27662718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27662876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27662888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3489;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0006;THETA=0.0007;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 27662930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1966;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 27663009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.8153;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27663144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.816;LDAF=0.0151;AVGPOST=0.9968;RSQ=0.9104;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27663225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27663646 . CAT C 290 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7495;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27663748 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27663844 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27663962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2231;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0025;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 27664026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27664098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27664135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0376;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0015;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 27664156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0375;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0008;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 27664212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27664292 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0067;AVGPOST=0.9978;RSQ=0.8688;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27664505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9689;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27664580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27664680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5084;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27664708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.686;LDAF=0.0079;AVGPOST=0.9955;RSQ=0.7574;ERATE=0.0011;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27664880 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9471;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27664898 rs35611571 CAGG C 200 PASS INDEL;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0050;AVGPOST=0.9975;RSQ=0.7815;ERATE=0.0004;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27664991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.637;LDAF=0.0033;AVGPOST=0.9961;RSQ=0.5713;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27665094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.499;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5286;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27665157 . C CA 42 PASS INDEL;BAVGPOST=0.993;BRSQ=0.387;LDAF=0.0096;AVGPOST=0.9872;RSQ=0.5150;ERATE=0.0006;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27665200 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27665295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9024;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27665396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27665419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9474;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27665507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7188;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27665535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8310;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27665556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27665557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.1062;AVGPOST=0.9983;RSQ=0.9923;ERATE=0.0004;THETA=0.0006;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 27665758 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1287;AVGPOST=0.9966;RSQ=0.9879;ERATE=0.0009;THETA=0.0011;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 27665793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8717;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27665811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.908;LDAF=0.1440;AVGPOST=0.9945;RSQ=0.9801;ERATE=0.0010;THETA=0.0008;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 27665912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.679;LDAF=0.0092;AVGPOST=0.9934;RSQ=0.7385;ERATE=0.0008;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27666052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6194;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27666091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27666269 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27666356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27666486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6096;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27666499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27666565 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27666682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0047;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27666790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27666815 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27666818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27666991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1705;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0031;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 27667057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27667116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27667122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27667202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27667228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1007;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 27667244 . TG T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27667314 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0050;AVGPOST=0.9999;RSQ=0.9912;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27667348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.8165;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27667590 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.0910;AVGPOST=0.9848;RSQ=0.9311;ERATE=0.0006;THETA=0.0009;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 27667726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27667843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27667887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27667920 . AAC A 1316 PASS INDEL;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0116;AVGPOST=0.9982;RSQ=0.9308;ERATE=0.0004;THETA=0.0013;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27668110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8649;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27668169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27668193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7635;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27668237 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0370;AVGPOST=0.9988;RSQ=0.9870;ERATE=0.0003;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 27668391 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.829;LDAF=0.0274;AVGPOST=0.9954;RSQ=0.9436;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27668745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.859;LDAF=0.0096;AVGPOST=0.9987;RSQ=0.9343;ERATE=0.0007;THETA=0.0017;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27668776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0013;AVGPOST=0.9979;RSQ=0.3992;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27668804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.791;LDAF=0.0073;AVGPOST=0.9992;RSQ=0.9464;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27668894 . C CT 854 PASS INDEL;BAVGPOST=0.984;BRSQ=0.724;LDAF=0.0388;AVGPOST=0.9643;RSQ=0.6274;ERATE=0.0074;THETA=0.0019;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 27668973 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9325;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27668992 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0092;AVGPOST=0.9988;RSQ=0.9400;ERATE=0.0004;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27669099 . CAT C 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6053;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27669563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.9913;AVGPOST=0.9991;RSQ=0.9572;ERATE=0.0004;THETA=0.0007;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 27669687 . TTC T 182 PASS INDEL;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0039;AVGPOST=0.9963;RSQ=0.6186;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27669864 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6998;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27669936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4427;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27669951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0135;AVGPOST=0.9968;RSQ=0.9083;ERATE=0.0005;THETA=0.0012;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27670031 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5484;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27670037 . C CA 604 PASS INDEL;BAVGPOST=0.926;BRSQ=0.441;LDAF=0.1311;AVGPOST=0.8324;RSQ=0.3855;ERATE=0.0322;THETA=0.0016;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 27670226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8375;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27670284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.880;LDAF=0.2229;AVGPOST=0.9545;RSQ=0.9009;ERATE=0.0042;THETA=0.0003;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 27670393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0239;AVGPOST=0.9802;RSQ=0.6403;ERATE=0.0021;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27670469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.923;LDAF=0.1743;AVGPOST=0.9747;RSQ=0.9373;ERATE=0.0010;THETA=0.0007;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 27670506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0290;AVGPOST=0.9941;RSQ=0.9184;ERATE=0.0012;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27670530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9217;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27670742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0366;AVGPOST=0.9967;RSQ=0.9625;ERATE=0.0003;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 27670794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9376;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27670836 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8131;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27670958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0057;AVGPOST=0.9983;RSQ=0.8859;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27670997 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27671138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9263;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27671184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1759;AVGPOST=0.9973;RSQ=0.9932;ERATE=0.0004;THETA=0.0005;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 27671210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27671367 . G GA 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5402;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27671418 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27671430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27671450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1774;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 27671513 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27671543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9917;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 27671570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27671634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27671664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.9771;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 27671904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9138;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27671921 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7206;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27671989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1774;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 27672109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.7898;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27672184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.8895;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27672304 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0082;AVGPOST=0.9968;RSQ=0.8516;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27672446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0221;AVGPOST=0.9965;RSQ=0.9419;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27672466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1773;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 27672533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27672555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8436;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27672628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27672682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8453;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27672776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27672808 . T TC 571 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9303;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27672969 . T TGA 487 PASS INDEL;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0052;AVGPOST=0.9993;RSQ=0.9388;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27672970 . TC T 297 PASS INDEL;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0050;AVGPOST=0.9996;RSQ=0.9630;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27672972 . TTC T 683 PASS INDEL;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.8988;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27672978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9710;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27672982 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9838;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27672983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5309;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27673114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0188;AVGPOST=0.9972;RSQ=0.9445;ERATE=0.0006;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27673203 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5471;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27673260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.918;LDAF=0.0234;AVGPOST=0.9976;RSQ=0.9552;ERATE=0.0005;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 27673310 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9732;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27673332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1110;AVGPOST=0.9851;RSQ=0.9358;ERATE=0.0003;THETA=0.0005;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 27673337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8857;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27673404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27673474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9277;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27673475 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8799;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27673522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27673730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27673748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27673826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27673849 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27673856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.886;LDAF=0.0615;AVGPOST=0.9810;RSQ=0.8778;ERATE=0.0396;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 27673871 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27674240 . C CT 39 PASS INDEL;BAVGPOST=0.997;BRSQ=0.547;LDAF=0.0066;AVGPOST=0.9950;RSQ=0.6920;ERATE=0.0011;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27674265 . C CT 2266 PASS INDEL;BAVGPOST=0.935;BRSQ=0.557;LDAF=0.1130;AVGPOST=0.8873;RSQ=0.5306;ERATE=0.0264;THETA=0.0007;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 27674274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9981;RSQ=0.9067;ERATE=0.0005;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27674425 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.523;LDAF=0.0152;AVGPOST=0.9866;RSQ=0.6321;ERATE=0.0008;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27674521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0205;AVGPOST=0.9937;RSQ=0.8890;ERATE=0.0006;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27674525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1826;AVGPOST=0.9927;RSQ=0.9805;ERATE=0.0007;THETA=0.0005;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 27674527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27674926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27674957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27674971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0271;AVGPOST=0.9992;RSQ=0.9873;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27674976 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27675014 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9612;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27675030 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9378;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27675066 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27675071 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27675142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27675148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27675221 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27675290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27675308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27675319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27675328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27675353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27675369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0012;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27675401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7678;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=1679;AN=2184 GT:DS:GL:BD 0.76877290 1
1 27675526 . C CA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.5821;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27675588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27675601 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2115;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 27675680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8057;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0007;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 27675684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0126;AVGPOST=0.9983;RSQ=0.9357;ERATE=0.0004;THETA=0.0022;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27675860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0117;AVGPOST=0.9987;RSQ=0.9612;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27675980 . CT C 1407 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9991;RSQ=0.9762;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27676082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27676154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8011;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1752;AN=2184 GT:DS:GL:BD 0.80219781 1
1 27676414 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27676476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27676479 . TG T 2498 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9687;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27676688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27676693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9874;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27676705 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27676708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0077;AVGPOST=0.9984;RSQ=0.9388;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27676785 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7681;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=1680;AN=2184 GT:DS:GL:BD 0.76923078 1
1 27676804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7354;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27676827 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27676841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27676891 . GA G 636 PASS INDEL;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0049;AVGPOST=0.9967;RSQ=0.7362;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27676898 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6706;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27676927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8598;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27676976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8034;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27676983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27677116 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2152;AVGPOST=0.9964;RSQ=0.9910;ERATE=0.0004;THETA=0.0002;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 27677193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27677252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27677265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.2054;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27677444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27677464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7686;AVGPOST=0.9974;RSQ=0.9936;ERATE=0.0006;THETA=0.0005;AC=1681;AN=2184 GT:DS:GL:BD 0.76968867 1
1 27677606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8397;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27677614 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0094;AVGPOST=0.9988;RSQ=0.9630;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27677666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27677690 . TA T 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0007;AVGPOST=0.9986;RSQ=0.2519;ERATE=0.0005;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27677806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27677825 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5842;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27677826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27677891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27677904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5411;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27677962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.1405;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27678020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8400;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27678030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8370;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27678186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8128;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0024;AC=1778;AN=2184 GT:DS:GL:BD 0.81410259 1
1 27678311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27678396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9261;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27678583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7694;AVGPOST=0.9974;RSQ=0.9937;ERATE=0.0007;THETA=0.0013;AC=1682;AN=2184 GT:DS:GL:BD 0.77014655 1
1 27678715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9261;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27678759 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27678767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27678819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27678840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8361;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27679195 . TATG T 2627 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9993;RSQ=0.9814;ERATE=0.0004;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27679200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27679207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9044;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27679265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0144;AVGPOST=0.9952;RSQ=0.8736;ERATE=0.0005;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27679275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7263;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27679298 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0038;AVGPOST=0.9969;RSQ=0.6678;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27679299 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.508;LDAF=0.0090;AVGPOST=0.9903;RSQ=0.5657;ERATE=0.0017;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27679415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.523;LDAF=0.0046;AVGPOST=0.9944;RSQ=0.5423;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27679421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.724;LDAF=0.0090;AVGPOST=0.9888;RSQ=0.5881;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27679494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0225;AVGPOST=0.9970;RSQ=0.9393;ERATE=0.0006;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27679514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0110;AVGPOST=0.9910;RSQ=0.6923;ERATE=0.0004;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27679557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0114;AVGPOST=0.9991;RSQ=0.9749;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27679614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0114;AVGPOST=0.9991;RSQ=0.9727;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27679700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27679764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7836;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27679840 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.701;LDAF=0.0039;AVGPOST=0.9967;RSQ=0.6484;ERATE=0.0010;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27679906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4601;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27679914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27679963 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27680023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27680234 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8680;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27680264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5774;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27680285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27680326 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27680378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8886;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27680384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7777;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27680398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8621;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27680402 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27680508 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1840;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0004;THETA=0.0008;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 27680541 . G GT 166 PASS INDEL;BAVGPOST=0.972;BRSQ=0.516;LDAF=0.0469;AVGPOST=0.9442;RSQ=0.4996;ERATE=0.0144;THETA=0.0015;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 27680605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9798;ERATE=0.0003;THETA=0.0018;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27680607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9341;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27680715 . G GA 67 PASS INDEL;BAVGPOST=0.990;BRSQ=0.505;LDAF=0.0189;AVGPOST=0.9743;RSQ=0.4899;ERATE=0.0040;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27681007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4798;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27681069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8267;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27681133 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8710;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27681238 . GA G 307 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27681362 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27681441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27681498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9702;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27681531 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27681581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27681584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27681614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27681615 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27681859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.4463;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27681975 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3756;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27682030 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6083;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27682069 . CTG C 18990 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1880;AVGPOST=0.9957;RSQ=0.9906;ERATE=0.0007;THETA=0.0005;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 27682114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6559;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27682148 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27682210 . T TA 448 PASS INDEL;BAVGPOST=0.991;BRSQ=0.737;LDAF=0.0185;AVGPOST=0.9927;RSQ=0.8364;ERATE=0.0005;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27682255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27682523 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27682566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27682597 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8680;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27682614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0818;AVGPOST=0.9978;RSQ=0.9903;ERATE=0.0003;THETA=0.0008;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 27682743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0158;AVGPOST=0.9985;RSQ=0.9599;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27682764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7491;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27682782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27682881 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27682992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27682993 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27682995 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4876;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27683008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27683023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.589;LDAF=0.0061;AVGPOST=0.9953;RSQ=0.7231;ERATE=0.0005;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27683109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.1860;AVGPOST=0.9981;RSQ=0.9953;ERATE=0.0005;THETA=0.0008;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 27683236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27683320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.4297;AVGPOST=0.9936;RSQ=0.9921;ERATE=0.0014;THETA=0.0003;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 27683372 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0817;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0003;THETA=0.0008;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 27683430 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9550;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27683624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4333;AVGPOST=0.9984;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 27683635 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27683640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27683675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6533;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27683699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.7095;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27683815 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7619;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27683831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0791;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 27683880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7300;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27683886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27683955 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1860;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0004;THETA=0.0010;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 27684130 . CATG C 1678 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27684207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27684324 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6680;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27684351 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0820;AVGPOST=0.9989;RSQ=0.9954;ERATE=0.0003;THETA=0.0012;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 27684405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0004;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27684407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27684512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8371;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27684513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1093;AVGPOST=0.9988;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 27684707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9616;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27684770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7437;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27684810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27684902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.0858;AVGPOST=0.9953;RSQ=0.9742;ERATE=0.0007;THETA=0.0005;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 27685112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9460;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27685130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27685284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8297;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27685358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27685432 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0263;AVGPOST=0.9979;RSQ=0.9716;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 27685484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9239;ERATE=0.0005;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27685747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0093;AVGPOST=0.9948;RSQ=0.7843;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27685857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.4896;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27685863 . TA T 135 PASS INDEL;BAVGPOST=0.840;BRSQ=0.247;LDAF=0.1800;AVGPOST=0.8120;RSQ=0.4775;ERATE=0.0101;THETA=0.0034;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 27685885 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.836;BRSQ=0.338;LDAF=0.2116;AVGPOST=0.7608;RSQ=0.4029;ERATE=0.0254;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 27685886 . A ATATT 1114 PASS INDEL;BAVGPOST=0.529;BRSQ=0.175;LDAF=0.4519;AVGPOST=0.6407;RSQ=0.3546;ERATE=0.0420;THETA=0.0003;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 27685886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0221;AVGPOST=0.9977;RSQ=0.9564;ERATE=0.0006;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27686048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7793;ERATE=0.0005;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27686112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.533;LDAF=0.0029;AVGPOST=0.9951;RSQ=0.3159;ERATE=0.0011;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27686137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.580;LDAF=0.0067;AVGPOST=0.9947;RSQ=0.6919;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27686143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9985;RSQ=0.9681;ERATE=0.0004;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27686183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0032;AVGPOST=0.9960;RSQ=0.5479;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27686184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0070;AVGPOST=0.9987;RSQ=0.9284;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27686200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9548;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27686260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4677;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27686374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9463;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27686649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5945;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27686709 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9386;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27686731 . T TAG 538 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0078;AVGPOST=0.9952;RSQ=0.7517;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27687004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9806;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27687029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9854;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27687127 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27687425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6612;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27687480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27687547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9253;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27687821 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27687888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27687903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27687989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27688045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5638;AVGPOST=0.9954;RSQ=0.9936;ERATE=0.0005;THETA=0.0003;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 27688205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9169;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27688257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0830;AVGPOST=0.9991;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 27688769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1079;AVGPOST=0.9979;RSQ=0.9933;ERATE=0.0008;THETA=0.0020;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 27688824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27688834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27688863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0074;AVGPOST=0.9994;RSQ=0.9618;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27689076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0106;AVGPOST=0.9984;RSQ=0.9372;ERATE=0.0006;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27689154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8519;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27689326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8079;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27689337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7490;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27689582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9798;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27689612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27689630 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0046;AVGPOST=0.9941;RSQ=0.5529;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27689661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0835;AVGPOST=0.9985;RSQ=0.9906;ERATE=0.0005;THETA=0.0006;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 27689788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0851;AVGPOST=0.9962;RSQ=0.9772;ERATE=0.0008;THETA=0.0004;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 27689901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0125;AVGPOST=0.9943;RSQ=0.8303;ERATE=0.0005;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27689919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9811;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27689946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5086;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27689954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4764;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27690020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1606;AVGPOST=0.9904;RSQ=0.9722;ERATE=0.0006;THETA=0.0002;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 27690095 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7389;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27690110 . A AC 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7399;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27690216 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27690372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7661;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27690558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7462;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=1630;AN=2184 GT:DS:GL:BD 0.74633700 1
1 27690590 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7458;AVGPOST=0.9974;RSQ=0.9951;ERATE=0.0006;THETA=0.0008;AC=1630;AN=2184 GT:DS:GL:BD 0.74633700 1
1 27690600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0084;AVGPOST=0.9976;RSQ=0.8786;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27690688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6074;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27690707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9477;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27690723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7713;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=1685;AN=2184 GT:DS:GL:BD 0.77152014 1
1 27690782 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27690842 . GC G 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6813;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27690855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27690893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0097;AVGPOST=0.9971;RSQ=0.8818;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27691028 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7480;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0005;AC=1634;AN=2184 GT:DS:GL:BD 0.74816847 1
1 27691066 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6174;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27691091 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27691097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27691197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6593;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27691257 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27691322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6718;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27691358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0932;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 27691458 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6279;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27691671 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9808;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27691694 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27691717 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.746;LDAF=0.0450;AVGPOST=0.9733;RSQ=0.7871;ERATE=0.0007;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 27692234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7405;AVGPOST=0.9970;RSQ=0.9942;ERATE=0.0009;THETA=0.0004;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 27692250 . CA C 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6603;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27692261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0194;AVGPOST=0.9992;RSQ=0.9822;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27692573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27692574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27692575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27692651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7409;AVGPOST=0.9991;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=1618;AN=2184 GT:DS:GL:BD 0.74084246 1
1 27692684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3046;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 27692756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4368;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0003;THETA=0.0008;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 27692769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27692780 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27692839 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7163;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27692840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27692982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7724;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=1688;AN=2184 GT:DS:GL:BD 0.77289379 1
1 27692997 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27693236 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4351;AVGPOST=0.9924;RSQ=0.9889;ERATE=0.0012;THETA=0.0006;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 27693462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27693513 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.826;LDAF=0.0227;AVGPOST=0.9915;RSQ=0.8541;ERATE=0.0020;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27693526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27693734 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.541;LDAF=0.0104;AVGPOST=0.9867;RSQ=0.5180;ERATE=0.0023;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27693869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6976;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27694096 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1858;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0015;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 27694198 . ATGG A 242 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9096;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27694256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27694257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9516;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27694290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7362;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27694315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9331;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27694377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27694452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0049;AVGPOST=0.9923;RSQ=0.4716;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27694690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.617;LDAF=0.0109;AVGPOST=0.9935;RSQ=0.7827;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27694704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9107;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27694710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.868;LDAF=0.1539;AVGPOST=0.9558;RSQ=0.9120;ERATE=0.0027;THETA=0.0002;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 27694718 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27694847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9516;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27694867 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0053;AVGPOST=0.9972;RSQ=0.7788;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27695151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9404;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27695183 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1830;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 27695197 rs10593223 CAGG C 39209 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3254;AVGPOST=0.9931;RSQ=0.9876;ERATE=0.0009;THETA=0.0108;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 27695669 . GCTC G 89 PASS INDEL;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0056;AVGPOST=0.9951;RSQ=0.6445;ERATE=0.0014;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27695674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27695727 . G GC 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27695790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27695841 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27696052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27696114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3444;AVGPOST=0.9953;RSQ=0.9916;ERATE=0.0012;THETA=0.0012;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 27696266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8360;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27696324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4027;AVGPOST=0.9953;RSQ=0.9920;ERATE=0.0006;THETA=0.0049;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 27696422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0885;AVGPOST=0.9984;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 27696611 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0901;AVGPOST=0.9979;RSQ=0.9900;ERATE=0.0004;THETA=0.0028;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 27696634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0877;AVGPOST=0.9978;RSQ=0.9898;ERATE=0.0003;THETA=0.0037;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 27696653 . C CT 194 PASS INDEL;BAVGPOST=0.970;BRSQ=0.502;LDAF=0.0488;AVGPOST=0.9426;RSQ=0.4889;ERATE=0.0116;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27696706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.617;LDAF=0.0040;AVGPOST=0.9955;RSQ=0.5771;ERATE=0.0004;THETA=0.0034;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27696784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0601;AVGPOST=0.9957;RSQ=0.9686;ERATE=0.0006;THETA=0.0094;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 27696800 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0478;AVGPOST=0.9946;RSQ=0.9520;ERATE=0.0004;THETA=0.0016;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 27696889 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.962;LDAF=0.4550;AVGPOST=0.9615;RSQ=0.9398;ERATE=0.0041;THETA=0.0014;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 27696915 . C CT 204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7776;ERATE=0.0004;THETA=0.0057;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27697063 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9901;ERATE=0.0003;THETA=0.0070;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27697075 . TG T 3938 PASS INDEL;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0383;AVGPOST=0.9967;RSQ=0.9609;ERATE=0.0006;THETA=0.0037;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 27697146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27697185 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9993;RSQ=0.9853;ERATE=0.0007;THETA=0.0011;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27697237 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27697313 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27697428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9901;ERATE=0.0003;THETA=0.0042;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27697473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0004;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27697534 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0486;AVGPOST=0.9993;RSQ=0.9936;ERATE=0.0003;THETA=0.0016;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27697546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1476;AVGPOST=0.9970;RSQ=0.9922;ERATE=0.0004;THETA=0.0006;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 27697566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27697568 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1476;AVGPOST=0.9971;RSQ=0.9925;ERATE=0.0003;THETA=0.0023;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 27697579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1682;AVGPOST=0.9973;RSQ=0.9935;ERATE=0.0004;THETA=0.0014;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 27697602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9615;ERATE=0.0008;THETA=0.0053;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27697678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27697690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.0757;AVGPOST=0.9964;RSQ=0.9789;ERATE=0.0006;THETA=0.0045;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 27697765 . A ATC 203 PASS INDEL;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.4638;ERATE=0.0010;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27697775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0501;AVGPOST=0.9981;RSQ=0.9842;ERATE=0.0003;THETA=0.0019;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 27697779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4711;ERATE=0.0005;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27697784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1253;AVGPOST=0.9957;RSQ=0.9871;ERATE=0.0004;THETA=0.0015;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 27697844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5487;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27697858 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5066;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27697869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5033;ERATE=0.0006;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27697876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1605;AVGPOST=0.9975;RSQ=0.9925;ERATE=0.0005;THETA=0.0011;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 27697945 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8200;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27698019 rs60747450 TTA T 2947 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27698160 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27698240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27698259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0755;AVGPOST=0.9941;RSQ=0.9698;ERATE=0.0005;THETA=0.0009;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 27698279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1729;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 27698353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.1209;AVGPOST=0.9966;RSQ=0.9881;ERATE=0.0004;THETA=0.0006;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 27698407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1723;AVGPOST=0.9969;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 27698412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27698446 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9060;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27698466 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27698665 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.0631;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0004;THETA=0.0003;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 27698672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0347;AVGPOST=0.9986;RSQ=0.9859;ERATE=0.0004;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 27698832 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27698902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0106;AVGPOST=0.9979;RSQ=0.9276;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27698913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5070;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27698938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.378;LDAF=0.9930;AVGPOST=0.9905;RSQ=0.4386;ERATE=0.0015;THETA=0.0005;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 27699018 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5459;ERATE=0.0007;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27699096 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.541;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4318;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27699289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3175;ERATE=0.0003;THETA=0.0049;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27699337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27699435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0140;AVGPOST=0.9985;RSQ=0.9541;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27699494 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9632;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27699805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1806;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0011;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 27699816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6387;ERATE=0.0011;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27699913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27699947 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8474;ERATE=0.0006;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27699949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0422;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 27699953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0422;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 27700032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9063;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27700299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0048;AVGPOST=0.9950;RSQ=0.5644;ERATE=0.0013;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27700317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5045;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27700323 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.3277;AVGPOST=0.9891;RSQ=0.9837;ERATE=0.0007;THETA=0.0013;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 27700345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.947;LDAF=0.0863;AVGPOST=0.9906;RSQ=0.9603;ERATE=0.0003;THETA=0.0006;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 27700346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6089;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27700443 . AT A 28 PASS INDEL;BAVGPOST=0.996;BRSQ=0.415;LDAF=0.0080;AVGPOST=0.9902;RSQ=0.5261;ERATE=0.0014;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27700446 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3595;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27700454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2935;AVGPOST=0.9942;RSQ=0.9885;ERATE=0.0006;THETA=0.0006;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 27700457 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.751;LDAF=0.0057;AVGPOST=0.9963;RSQ=0.7157;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27700483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8400;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27700498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27700534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0454;AVGPOST=0.9994;RSQ=0.9929;ERATE=0.0003;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 27700541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1956;AVGPOST=0.9907;RSQ=0.9750;ERATE=0.0014;THETA=0.0003;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 27700644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6227;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27700809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4759;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0003;THETA=0.0008;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 27700915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7086;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27700918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5390;AVGPOST=0.9959;RSQ=0.9938;ERATE=0.0009;THETA=0.0003;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 27700985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6242;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27700991 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.385;LDAF=0.0133;AVGPOST=0.9806;RSQ=0.4561;ERATE=0.0039;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27700993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6657;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27701022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0597;AVGPOST=0.9982;RSQ=0.9868;ERATE=0.0005;THETA=0.0002;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 27701045 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27701159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8308;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27701172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.580;LDAF=0.0035;AVGPOST=0.9952;RSQ=0.5010;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27701257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0019;AVGPOST=0.9968;RSQ=0.3994;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27701367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0741;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0002;THETA=0.0014;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 27701507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27701513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4086;AVGPOST=0.9947;RSQ=0.9919;ERATE=0.0004;THETA=0.0006;AC=893;AN=2184 GT:DS:GL:BD 0.40888280 0
1 27701539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27701802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27701870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4716;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27701906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0179;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27701910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27702109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7543;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27702401 . TA T 1135 PASS INDEL;BAVGPOST=0.993;BRSQ=0.957;LDAF=0.0703;AVGPOST=0.9967;RSQ=0.9798;ERATE=0.0005;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 27702495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1133;AVGPOST=0.9925;RSQ=0.9756;ERATE=0.0008;THETA=0.0006;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 27702522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9473;AVGPOST=0.9976;RSQ=0.9839;ERATE=0.0004;THETA=0.0008;AC=2069;AN=2184 GT:DS:GL:BD 0.94734430 1
1 27702597 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27702610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1111;AVGPOST=0.9955;RSQ=0.9842;ERATE=0.0006;THETA=0.0008;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 27702628 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.4698;AVGPOST=0.9886;RSQ=0.9835;ERATE=0.0010;THETA=0.0004;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 27702652 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9460;AVGPOST=0.9979;RSQ=0.9857;ERATE=0.0006;THETA=0.0027;AC=2066;AN=2184 GT:DS:GL:BD 0.94597071 1
1 27702653 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7230;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27702680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6836;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27702725 . CA C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3837;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27702969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6535;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27703003 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9464;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=2067;AN=2184 GT:DS:GL:BD 0.94642860 1
1 27703139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1554;AVGPOST=0.9948;RSQ=0.9839;ERATE=0.0005;THETA=0.0004;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 27703181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9975;RSQ=0.9445;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27703190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8106;AVGPOST=0.9971;RSQ=0.9941;ERATE=0.0006;THETA=0.0005;AC=1769;AN=2184 GT:DS:GL:BD 0.80998170 1
1 27703217 . TAGTG T 67 PASS INDEL;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5560;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27703236 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.789;LDAF=0.0087;AVGPOST=0.9953;RSQ=0.8133;ERATE=0.0003;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27703350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0172;AVGPOST=0.9989;RSQ=0.9728;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 27703356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7220;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27703408 . CT C 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4534;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27703492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9810;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27703597 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.9017;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27703635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27703692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6356;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27703721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7177;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27703790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27703835 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0066;AVGPOST=0.9980;RSQ=0.8835;ERATE=0.0006;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27704106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9280;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27704225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9109;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27704241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.781;LDAF=0.0105;AVGPOST=0.9979;RSQ=0.9235;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27704245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6418;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27704513 . A AT 623 PASS INDEL;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0084;AVGPOST=0.9971;RSQ=0.8929;ERATE=0.0002;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27704527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4602;AVGPOST=0.9920;RSQ=0.9870;ERATE=0.0005;THETA=0.0002;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 27704823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5789;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27704824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0154;AVGPOST=0.9987;RSQ=0.9622;ERATE=0.0002;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27704862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27705062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27705248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9427;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27705543 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27705699 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7340;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27705740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9200;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27705917 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.877;LDAF=0.0515;AVGPOST=0.9884;RSQ=0.9112;ERATE=0.0030;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 27705976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.868;LDAF=0.0847;AVGPOST=0.9819;RSQ=0.9169;ERATE=0.0032;THETA=0.0005;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 27705980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.933;LDAF=0.0709;AVGPOST=0.9848;RSQ=0.9227;ERATE=0.0006;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 27706123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0121;AVGPOST=0.9942;RSQ=0.8023;ERATE=0.0006;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27706126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.948;LDAF=0.0387;AVGPOST=0.9943;RSQ=0.9429;ERATE=0.0008;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 27706213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9299;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27706327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27706354 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9986;RSQ=0.9334;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27706576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9528;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27706727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9025;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27706750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27706773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0058;AVGPOST=0.9975;RSQ=0.8301;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27706844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0104;AVGPOST=0.9935;RSQ=0.7386;ERATE=0.0006;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27706996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4453;ERATE=0.0008;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27707124 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0039;AVGPOST=0.9949;RSQ=0.4718;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27707178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.619;LDAF=0.0050;AVGPOST=0.9963;RSQ=0.7005;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27707187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6325;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27707208 . A AT 92 PASS INDEL;BAVGPOST=0.996;BRSQ=0.701;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.7117;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27707212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7395;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27707271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27707283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8761;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27707288 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7147;ERATE=0.0004;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27707416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0006;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27707467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.3112;AVGPOST=0.9861;RSQ=0.9766;ERATE=0.0008;THETA=0.0008;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 27707549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9943;RSQ=0.6654;ERATE=0.0006;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27707616 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0119;AVGPOST=0.9983;RSQ=0.9364;ERATE=0.0004;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27707629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0953;AVGPOST=0.9987;RSQ=0.9933;ERATE=0.0004;THETA=0.0006;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 27707670 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0919;AVGPOST=0.9987;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 27707775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0136;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27708003 . GC G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7109;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27708035 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6867;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27708178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27708343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0742;AVGPOST=0.9975;RSQ=0.9887;ERATE=0.0003;THETA=0.0005;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 27708359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27708373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6365;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27708377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.1971;AVGPOST=0.9958;RSQ=0.9911;ERATE=0.0007;THETA=0.0005;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 27708442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6644;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27708480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5249;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27708676 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.877;LDAF=0.0263;AVGPOST=0.9946;RSQ=0.9207;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27708740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0090;AVGPOST=0.9976;RSQ=0.8911;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27708785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5624;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27708801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8314;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27708899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27709019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9672;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27709121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9826;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27709241 . TCTC T 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0053;AVGPOST=0.9941;RSQ=0.6013;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27709328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9988;RSQ=0.9230;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27709360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7597;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27709451 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27709620 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8730;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27709628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7564;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27709677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1058;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 27709704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7987;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27709763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27709816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0114;AVGPOST=0.9994;RSQ=0.9742;ERATE=0.0004;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27709845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27709851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27709865 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27709925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27709948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9358;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27710028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0117;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27710049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27710230 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27710422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27710439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27710504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0969;AVGPOST=0.9988;RSQ=0.9942;ERATE=0.0004;THETA=0.0012;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 27710555 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0003;THETA=0.0022;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27710585 . CCG C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.5229;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27710631 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0076;AVGPOST=0.9991;RSQ=0.9544;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27710632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8620;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27710635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0523;AVGPOST=0.9989;RSQ=0.9907;ERATE=0.0003;THETA=0.0004;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 27710670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9557;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27710701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6241;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27710754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.0834;AVGPOST=0.9953;RSQ=0.9784;ERATE=0.0008;THETA=0.0009;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 27710764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0922;AVGPOST=0.9983;RSQ=0.9931;ERATE=0.0004;THETA=0.0007;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 27710832 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5088;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27710839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27711158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0319;AVGPOST=0.9976;RSQ=0.9703;ERATE=0.0004;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 27711294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3874;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27711296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7622;AVGPOST=0.9971;RSQ=0.9938;ERATE=0.0004;THETA=0.0009;AC=1666;AN=2184 GT:DS:GL:BD 0.76282054 1
1 27711391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0083;AVGPOST=0.9996;RSQ=0.9770;ERATE=0.0004;THETA=0.0031;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27711423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27711487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27711577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27711604 . CTG C 17 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5790;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27711623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27711633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27711682 . T TG 27667 PASS INDEL;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.5658;AVGPOST=0.9679;RSQ=0.9501;ERATE=0.0064;THETA=0.0003;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 27711734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9353;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27711891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27711896 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27711966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0119;AVGPOST=0.9983;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27712381 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5773;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27712766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0520;AVGPOST=0.9994;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 27712874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7866;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27712883 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0083;AVGPOST=0.9988;RSQ=0.9400;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27712922 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0698;AVGPOST=0.9986;RSQ=0.9916;ERATE=0.0004;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 27712948 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9247;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27712949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3920;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27713089 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6495;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 27713192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3994;AVGPOST=0.9944;RSQ=0.9908;ERATE=0.0005;THETA=0.0004;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 27713240 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27713276 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6495;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 27713295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9823;ERATE=0.0003;THETA=0.0013;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27713313 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9190;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27713331 . GA G 562 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9630;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27713437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7196;AVGPOST=0.9972;RSQ=0.9946;ERATE=0.0009;THETA=0.0002;AC=1572;AN=2184 GT:DS:GL:BD 0.71978021 1
1 27713488 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8165;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27713556 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0367;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0003;THETA=0.0012;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 27713676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6883;AVGPOST=0.9967;RSQ=0.9948;ERATE=0.0007;THETA=0.0009;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 27713785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6746;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27713831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0011;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27713927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27713942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5423;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27714097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27714139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8106;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=1771;AN=2184 GT:DS:GL:BD 0.81089741 1
1 27714269 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5730;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27714371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0034;AVGPOST=0.9974;RSQ=0.7017;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27714385 . CGT C 415 PASS INDEL;BAVGPOST=0.973;BRSQ=0.650;LDAF=0.0694;AVGPOST=0.9263;RSQ=0.5277;ERATE=0.0254;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 27714389 . C CAT 94 PASS INDEL;BAVGPOST=0.997;BRSQ=0.568;LDAF=0.0063;AVGPOST=0.9929;RSQ=0.5539;ERATE=0.0009;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27714416 . CAT C 648 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0135;AVGPOST=0.9972;RSQ=0.9185;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27714429 . TAC T 52 PASS INDEL;BAVGPOST=0.997;BRSQ=0.672;LDAF=0.0066;AVGPOST=0.9928;RSQ=0.5552;ERATE=0.0031;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27714491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4792;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27714493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.4084;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27714503 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5252;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27714615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27714622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4850;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27714692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27714855 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9116;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27714878 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27714931 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27714952 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27715201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0278;AVGPOST=0.9992;RSQ=0.9878;ERATE=0.0003;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 27715260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27715326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6497;AVGPOST=0.9975;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 27715347 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.4466;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27715415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27715477 . CCTT C 1056 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9797;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27715494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6778;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=1481;AN=2184 GT:DS:GL:BD 0.67811358 1
1 27715514 rs55925173 T TA 78742 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6504;AVGPOST=0.9962;RSQ=0.9942;ERATE=0.0006;THETA=0.0006;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 27715521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27715535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0278;AVGPOST=0.9983;RSQ=0.9747;ERATE=0.0004;THETA=0.0012;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27715859 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7835;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27715885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6234;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0006;THETA=0.0011;AC=1362;AN=2184 GT:DS:GL:BD 0.62362635 1
1 27715919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27715923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0517;AVGPOST=0.9986;RSQ=0.9886;ERATE=0.0003;THETA=0.0008;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 27715945 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27715961 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9205;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27716106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.818;LDAF=0.0236;AVGPOST=0.9928;RSQ=0.8727;ERATE=0.0005;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27716117 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0163;AVGPOST=0.9980;RSQ=0.9548;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27716219 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8364;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27716305 . GT G 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6740;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27716360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9028;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27716377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6237;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27716459 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27716608 . AT A 181 PASS INDEL;BAVGPOST=0.991;BRSQ=0.614;LDAF=0.0253;AVGPOST=0.9754;RSQ=0.6340;ERATE=0.0041;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27716632 . T TA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8806;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27716641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27716683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7900;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27716762 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8475;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27716798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0062;AVGPOST=0.9973;RSQ=0.8314;ERATE=0.0008;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27716903 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9260;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27717032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27717115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0276;AVGPOST=0.9990;RSQ=0.9834;ERATE=0.0004;THETA=0.0012;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 27717148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3813;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27717182 . T TC 1046 PASS INDEL;BAVGPOST=0.812;BRSQ=0.498;LDAF=0.3388;AVGPOST=0.8118;RSQ=0.6854;ERATE=0.0112;THETA=0.0005;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 27717199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4278;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27717482 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9312;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27717565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27717576 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27717742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27717875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3745;AVGPOST=0.9957;RSQ=0.9932;ERATE=0.0006;THETA=0.0008;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 27717901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27717934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27717937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0204;AVGPOST=0.9986;RSQ=0.9708;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 27717948 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27717965 rs112129688 GTTATA G 83642 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3728;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0009;THETA=0.0004;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 27718037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7778;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27718086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8380;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27718163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27718262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27718282 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0284;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27718324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9983;RSQ=0.8778;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27718375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27718432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7437;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27718657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27718750 rs111489631 C CT 2226 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0151;AVGPOST=0.9989;RSQ=0.9699;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27719122 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27719189 . G GC 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6944;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27719266 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27719387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0085;AVGPOST=0.9980;RSQ=0.9146;ERATE=0.0003;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27719504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4492;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27719505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8859;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27719510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5160;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27719619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4523;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27719634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8228;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27719785 . AT A 2002 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27719827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6963;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27719839 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.760;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.8095;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27719891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27719983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8234;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27719988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0047;AVGPOST=0.9955;RSQ=0.6270;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27720002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27720126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 27720171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27720208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.5259;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27720252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27720584 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27720708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0103;AVGPOST=0.9985;RSQ=0.9405;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27720760 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9877;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27720820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27720996 . GTAGT G 268 PASS INDEL;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8895;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27721051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27721269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0017;AVGPOST=0.9998;RSQ=0.9391;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27721420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.881;LDAF=0.0503;AVGPOST=0.9932;RSQ=0.9476;ERATE=0.0008;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27721484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9804;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27721520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27721525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27721537 . A ATT 132 PASS INDEL;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8208;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27721686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6242;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27721708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1339;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0008;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 27721911 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8576;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27722153 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3959;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 27722223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27722251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27722275 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8750;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27722403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8738;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27722459 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8336;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27722498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9831;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27722500 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27722565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.767;LDAF=0.0063;AVGPOST=0.9955;RSQ=0.7525;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27722646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6015;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27722697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6930;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27722787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9830;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27722959 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9823;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27722965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9074;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27723092 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.698;LDAF=0.0201;AVGPOST=0.9819;RSQ=0.6452;ERATE=0.0050;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27723159 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.9225;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27723207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27723247 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8528;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27723287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2271;AVGPOST=0.9978;RSQ=0.9947;ERATE=0.0005;THETA=0.0005;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 27723560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0172;AVGPOST=0.9984;RSQ=0.9724;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 27723561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27723619 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9389;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27723792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9090;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27723813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9718;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27723997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3245;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0005;THETA=0.0008;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 27724157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5979;ERATE=0.0007;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27724160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9689;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27724210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8626;ERATE=0.0008;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27724211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27724311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27724386 . C CA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27724622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1301;AVGPOST=0.9975;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 27724739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5970;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27724786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8639;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27724816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.6540;AVGPOST=0.9740;RSQ=0.9587;ERATE=0.0045;THETA=0.0003;AC=1430;AN=2184 GT:DS:GL:BD 0.65476191 1
1 27724973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6307;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27725153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9611;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27725233 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2466;AVGPOST=0.9966;RSQ=0.9926;ERATE=0.0006;THETA=0.0003;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 27725251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5852;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27725318 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27725342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2551;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 27725348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6712;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0006;THETA=0.0004;AC=1466;AN=2184 GT:DS:GL:BD 0.67124540 1
1 27725556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6563;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27725637 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0123;AVGPOST=0.9994;RSQ=0.9819;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27725669 . AC A 150 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6964;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27725769 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27725864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2269;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0005;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 27725873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9053;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27725881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9702;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27725935 . T TC 198 PASS INDEL;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0105;AVGPOST=0.9920;RSQ=0.7126;ERATE=0.0007;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27726010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.866;BRSQ=0.724;LDAF=0.3029;AVGPOST=0.8375;RSQ=0.7166;ERATE=0.0154;THETA=0.0003;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 27726030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0041;AVGPOST=0.9935;RSQ=0.3502;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27726216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.568;LDAF=0.0142;AVGPOST=0.9812;RSQ=0.5004;ERATE=0.0025;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27726230 . C CT 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5957;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27726404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5195;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27726410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5164;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27726474 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2156;AVGPOST=0.9957;RSQ=0.9904;ERATE=0.0010;THETA=0.0006;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 27726625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4900;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27726643 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5095;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27726705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8936;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27726827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1859;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 27726828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6965;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27726887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6839;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27726893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0063;AVGPOST=0.9948;RSQ=0.7030;ERATE=0.0006;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27727046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.858;LDAF=0.0120;AVGPOST=0.9972;RSQ=0.8953;ERATE=0.0008;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27727195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.692;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6950;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27727216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27727469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4484;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27727497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.975;LDAF=0.2162;AVGPOST=0.9899;RSQ=0.9759;ERATE=0.0009;THETA=0.0007;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 27727556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4311;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27727740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.613;LDAF=0.0040;AVGPOST=0.9969;RSQ=0.6893;ERATE=0.0007;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27727783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9668;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27727993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4800;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27728040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.537;LDAF=0.0141;AVGPOST=0.9823;RSQ=0.5343;ERATE=0.0022;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27728041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8335;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27728199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0108;AVGPOST=0.9989;RSQ=0.9551;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27728299 rs11573551 GACAA G 406 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9403;ERATE=0.0004;THETA=0.0050;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27728312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0114;AVGPOST=0.9990;RSQ=0.9620;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27728400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0057;AVGPOST=0.9977;RSQ=0.8422;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27728438 . T TC 3018 PASS INDEL;BAVGPOST=0.964;BRSQ=0.899;LDAF=0.1989;AVGPOST=0.9676;RSQ=0.9258;ERATE=0.0038;THETA=0.0005;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 27728439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.956;LDAF=0.2293;AVGPOST=0.9631;RSQ=0.9253;ERATE=0.0080;THETA=0.0078;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 27728440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4090;ERATE=0.0006;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27728462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9971;RSQ=0.6864;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27728715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.926;LDAF=0.1938;AVGPOST=0.9632;RSQ=0.9121;ERATE=0.0073;THETA=0.0006;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 27728808 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0097;AVGPOST=0.9958;RSQ=0.8180;ERATE=0.0005;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27728888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.650;LDAF=0.0046;AVGPOST=0.9945;RSQ=0.5133;ERATE=0.0010;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27728891 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.8995;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27728899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7645;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27728937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9989;RSQ=0.9753;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27728993 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6605;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27729132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6765;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27729134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27729142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3659;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0004;THETA=0.0007;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 27729144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27729208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9195;ERATE=0.0004;THETA=0.0049;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27729407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9115;ERATE=0.0004;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27729428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.7894;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27729474 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.2959;AVGPOST=0.9884;RSQ=0.9805;ERATE=0.0008;THETA=0.0005;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 27729526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.980;LDAF=0.1896;AVGPOST=0.9946;RSQ=0.9866;ERATE=0.0009;THETA=0.0006;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 27729540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.8147;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27729606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.363;LDAF=0.0034;AVGPOST=0.9952;RSQ=0.4435;ERATE=0.0007;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27729894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.966;LDAF=0.3658;AVGPOST=0.9831;RSQ=0.9701;ERATE=0.0021;THETA=0.0003;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 27730057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.7958;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27730152 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.9007;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27730203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.508;LDAF=0.0114;AVGPOST=0.9835;RSQ=0.4798;ERATE=0.0019;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27730297 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7741;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27730328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5687;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27730332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8638;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27730365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.655;LDAF=0.0132;AVGPOST=0.9930;RSQ=0.7816;ERATE=0.0007;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27730366 . CAAAA C 375 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0044;AVGPOST=0.9982;RSQ=0.8372;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27730429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0069;AVGPOST=0.9884;RSQ=0.3751;ERATE=0.0015;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27730564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.943;LDAF=0.0341;AVGPOST=0.9966;RSQ=0.9571;ERATE=0.0005;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 27730629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0050;AVGPOST=0.9942;RSQ=0.5012;ERATE=0.0029;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27730638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27730777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27730955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27730991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.893;LDAF=0.8085;AVGPOST=0.9434;RSQ=0.8709;ERATE=0.0143;THETA=0.0007;AC=1783;AN=2184 GT:DS:GL:BD 0.81639194 1
1 27731003 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0642;AVGPOST=0.9945;RSQ=0.9661;ERATE=0.0004;THETA=0.0008;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 27731034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7010;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27731067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6232;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27731068 rs59051138 C CA 775 PASS INDEL;BAVGPOST=0.598;BRSQ=0.263;LDAF=0.5734;AVGPOST=0.6640;RSQ=0.4266;ERATE=0.0334;THETA=0.0006;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 27731347 . A AAAAG 126 PASS INDEL;BAVGPOST=0.886;BRSQ=0.152;LDAF=0.1600;AVGPOST=0.8022;RSQ=0.4242;ERATE=0.0127;THETA=0.0008;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 27731366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9741;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27731495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27731527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8243;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27731983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0040;AVGPOST=0.9959;RSQ=0.6764;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27732080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7727;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27732119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5072;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 27732262 . TC T 2732 PASS INDEL;BAVGPOST=0.993;BRSQ=0.815;LDAF=0.0205;AVGPOST=0.9939;RSQ=0.8779;ERATE=0.0003;THETA=0.0009;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27732329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0325;AVGPOST=0.9984;RSQ=0.9814;ERATE=0.0004;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 27732351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27732498 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6522;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27732512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27732600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6454;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27732714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9489;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27732715 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5608;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27732765 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27732798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9841;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27732895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9993;AVGPOST=0.9986;RSQ=0.2619;ERATE=0.0003;THETA=0.0006;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 27732896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27732920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27733030 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27733132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27733173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5966;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27733220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3313;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0004;THETA=0.0007;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 27733259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7786;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27733273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5046;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0003;THETA=0.0008;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 27733275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27733334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0220;AVGPOST=0.9984;RSQ=0.9714;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 27733474 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7697;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27733521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0965;AVGPOST=0.9942;RSQ=0.9769;ERATE=0.0002;THETA=0.0009;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 27733589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7762;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27733671 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0002;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27733743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27733765 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27733772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5673;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27733894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27733940 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27734011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3245;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 27734274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.589;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5909;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27734344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5341;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27734417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5104;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27734598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0070;AVGPOST=0.9989;RSQ=0.9418;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27734645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27734665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8654;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27734714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27734907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27735086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27735309 . TGCATTCGC T 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27735694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6111;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27735700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3302;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 27735765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.8338;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27735768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7586;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27735828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6830;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27735832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27735847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27735915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8353;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27735929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.929;LDAF=0.0152;AVGPOST=0.9982;RSQ=0.9528;ERATE=0.0002;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27735949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0033;AVGPOST=0.9972;RSQ=0.6463;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27736301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9519;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27736320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0158;AVGPOST=0.9984;RSQ=0.9523;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27736325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.913;LDAF=0.5756;AVGPOST=0.9706;RSQ=0.9578;ERATE=0.0011;THETA=0.0002;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 27736369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0061;AVGPOST=0.9978;RSQ=0.8372;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27736370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0495;AVGPOST=0.9967;RSQ=0.9734;ERATE=0.0004;THETA=0.0007;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27736374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.919;LDAF=0.5734;AVGPOST=0.9707;RSQ=0.9570;ERATE=0.0007;THETA=0.0003;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 27736384 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0026;AVGPOST=0.9964;RSQ=0.4620;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27736395 . G GT 56 PASS INDEL;BAVGPOST=0.997;BRSQ=0.647;LDAF=0.0100;AVGPOST=0.9875;RSQ=0.5098;ERATE=0.0038;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27736526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0098;AVGPOST=0.9864;RSQ=0.4991;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27736560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.586;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5458;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27736620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27736661 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8366;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27736899 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27736909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27736944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27736985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0078;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0004;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27737112 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5671;ERATE=0.0009;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27737116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9260;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27737190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27737264 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27737268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9594;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27737412 . TC T 522 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9298;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27737447 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5345;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27737651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9471;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27737663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9504;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27737667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8798;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27737695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7230;ERATE=0.0009;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27737716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27738035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4857;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27738084 . GT G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3973;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27738296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8212;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27738537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8594;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27738610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3280;AVGPOST=0.9966;RSQ=0.9937;ERATE=0.0006;THETA=0.0004;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 27738621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8650;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27738761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27739019 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27739123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27739158 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27739183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0015;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27739189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27739193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0010;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 27739228 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9904;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27739273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27739303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0188;AVGPOST=0.9985;RSQ=0.9679;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27739648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9872;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27739740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0256;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27739750 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27739774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27739776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0416;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 27739854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9062;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27739933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 27740061 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27740139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27740152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8225;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27740383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27740399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.5850;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27740418 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8806;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27740507 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27740574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5268;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27740639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6147;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27740660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6698;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27740697 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27740737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0164;AVGPOST=0.9992;RSQ=0.9792;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27740859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7969;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27740865 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9731;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27740885 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0416;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 27741007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27741103 rs34077389 T TA 182 PASS INDEL;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8644;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27741181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27741239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9704;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27741505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9486;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27741524 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27741534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27741548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6088;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27741564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27741673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0443;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 27741711 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0309;AVGPOST=0.9974;RSQ=0.9676;ERATE=0.0004;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27741789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6173;AVGPOST=0.9934;RSQ=0.9892;ERATE=0.0004;THETA=0.0003;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 27741800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27741807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27741900 rs72398359 AAAG A 4884 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9984;RSQ=0.9805;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27741911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27741930 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0444;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0009;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 27741939 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27742131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27742161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27742297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9894;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27742298 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27742328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27742340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7986;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27742354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27742401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27742428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8811;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27742590 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27742765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.911;LDAF=0.0148;AVGPOST=0.9957;RSQ=0.8950;ERATE=0.0003;THETA=0.0018;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27742818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0447;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 27742819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8332;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27742857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27742955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9806;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27742989 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0072;AVGPOST=0.9989;RSQ=0.9528;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27743042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0489;AVGPOST=0.9975;RSQ=0.9803;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 27743048 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7538;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27743076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27743089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0486;AVGPOST=0.9988;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 27743177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7557;ERATE=0.0012;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27743283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27743363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8620;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27743389 . TG T 86 PASS INDEL;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0038;AVGPOST=0.9973;RSQ=0.7432;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27743482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27743806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27743888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27743895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27743896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9423;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27743920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.7006;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27743941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0375;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 27743971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7787;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27744031 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0052;AVGPOST=0.9991;RSQ=0.9272;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27744059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0066;AVGPOST=0.9988;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27744075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0415;AVGPOST=0.9985;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 27744102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6388;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27744208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8807;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27744224 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0176;AVGPOST=0.9993;RSQ=0.9863;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27744315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27744322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9825;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27744459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0094;AVGPOST=0.9983;RSQ=0.9437;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27744477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0560;AVGPOST=0.9957;RSQ=0.9724;ERATE=0.0003;THETA=0.0002;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 27744539 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9743;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27744619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0115;AVGPOST=0.9942;RSQ=0.8312;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27744693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0088;AVGPOST=0.9987;RSQ=0.9466;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27744698 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0070;AVGPOST=0.9985;RSQ=0.9174;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27744728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.776;LDAF=0.0099;AVGPOST=0.9978;RSQ=0.9183;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27744753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0089;AVGPOST=0.9992;RSQ=0.9632;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27744795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0090;AVGPOST=0.9996;RSQ=0.9834;ERATE=0.0003;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27744812 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27744814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9825;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27744879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27744909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27744920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27744944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0064;AVGPOST=0.9972;RSQ=0.8268;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27745010 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0239;AVGPOST=0.9943;RSQ=0.9111;ERATE=0.0005;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 27745077 . A AC 2748 PASS INDEL;BAVGPOST=0.977;BRSQ=0.824;LDAF=0.0737;AVGPOST=0.9757;RSQ=0.8641;ERATE=0.0006;THETA=0.0006;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 27745082 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27745102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0284;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27745126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27745142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27745199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27745206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27745266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6599;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27745288 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27745303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27745319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6755;AVGPOST=0.9958;RSQ=0.9921;ERATE=0.0005;THETA=0.0005;AC=1474;AN=2184 GT:DS:GL:BD 0.67490840 1
1 27745379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0184;AVGPOST=0.9978;RSQ=0.9598;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27745387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7600;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27745397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9349;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27745437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27745466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9840;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27745469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27745499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0003;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27745507 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27745652 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8610;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27745707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27745757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0728;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 27745799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5191;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27745817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27745965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27746089 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27746103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27746120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6088;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27746121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5324;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27746268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27746429 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9995;RSQ=0.9733;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27746450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27746744 . GA G 6441 PASS INDEL;BAVGPOST=0.988;BRSQ=0.940;LDAF=0.1017;AVGPOST=0.9949;RSQ=0.9780;ERATE=0.0005;THETA=0.0006;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 27746789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8446;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27746810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0002;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27746824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6768;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27746845 . TC T 197 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8575;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27747011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0023;AVGPOST=0.9966;RSQ=0.4198;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27747233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0002;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27747301 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0281;AVGPOST=0.9959;RSQ=0.9465;ERATE=0.0006;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 27747321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7114;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27747452 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0271;AVGPOST=0.9994;RSQ=0.9906;ERATE=0.0003;THETA=0.0019;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27747474 . GA G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5553;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27747488 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.6009;AVGPOST=0.9921;RSQ=0.9877;ERATE=0.0004;THETA=0.0002;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 27747515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5851;AVGPOST=0.9940;RSQ=0.9908;ERATE=0.0004;THETA=0.0005;AC=1279;AN=2184 GT:DS:GL:BD 0.58562273 1
1 27747538 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27747566 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4707;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27747933 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6455;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27747947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9908;ERATE=0.0002;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27747971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6330;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27748472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27748552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0234;AVGPOST=0.9986;RSQ=0.9756;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27748566 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27748626 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27748637 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9722;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27748747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27748857 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9395;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27748965 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27748979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2830;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27748998 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27749098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5831;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27749216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9688;ERATE=0.0002;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27749305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27749343 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4733;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27749482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27749651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0010;AVGPOST=0.9980;RSQ=0.3248;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27749672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7682;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27749853 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7798;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27749864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0176;AVGPOST=0.9990;RSQ=0.9727;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27750086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8481;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27750097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1136;AVGPOST=0.9986;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 27750249 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0087;AVGPOST=0.9970;RSQ=0.8643;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27750259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0551;AVGPOST=0.9951;RSQ=0.9631;ERATE=0.0004;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 27750285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9104;ERATE=0.0003;THETA=0.0037;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27750314 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27750366 . C CT 1074 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9818;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27750448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0002;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27750468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5312;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27750493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27750566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0289;AVGPOST=0.9986;RSQ=0.9797;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27750615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.8879;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27750782 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.969;LDAF=0.3942;AVGPOST=0.9919;RSQ=0.9881;ERATE=0.0009;THETA=0.0006;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 27750928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9264;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27751163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7888;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27751191 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7787;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27751295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4971;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27751557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0103;AVGPOST=0.9981;RSQ=0.9200;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27751623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27751769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5553;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27751815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2661;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 27752042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27752052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27752062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5861;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27752264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8030;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27752378 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6836;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27752382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7876;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27752455 . G GT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27752502 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8847;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27752528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27752620 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27752745 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8655;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27752857 . C CT 95 PASS INDEL;BAVGPOST=0.985;BRSQ=0.520;LDAF=0.0282;AVGPOST=0.9647;RSQ=0.4877;ERATE=0.0107;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27752984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6508;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27753484 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0113;AVGPOST=0.9972;RSQ=0.9161;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27753578 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27753760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27753792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8043;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27753874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9156;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27754165 . AC A 186 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27754256 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0278;AVGPOST=0.9983;RSQ=0.9780;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 27754289 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6889;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27754564 . AG A 2022 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0159;AVGPOST=0.9992;RSQ=0.9800;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27754587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7454;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27754599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7927;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27754759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7054;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27754818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0164;AVGPOST=0.9977;RSQ=0.9515;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 27754848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27754866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2653;AVGPOST=0.9968;RSQ=0.9934;ERATE=0.0003;THETA=0.0008;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 27754914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7007;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27755273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27755284 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27755314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8833;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27755343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27755390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8638;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27755454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8824;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27755612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27755664 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9081;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27755758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8787;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27755907 . CT C 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.4575;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27755931 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9190;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27756089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0184;AVGPOST=0.9989;RSQ=0.9758;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27756467 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27756507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9594;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27756593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27756594 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.670;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6953;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27756721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27756796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27756806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7841;ERATE=0.0002;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27756873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8451;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27756880 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8719;ERATE=0.0004;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27757039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0205;AVGPOST=0.9989;RSQ=0.9777;ERATE=0.0003;THETA=0.0009;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27757073 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6194;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27757146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27757156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9436;ERATE=0.0002;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27757177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7488;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27757281 . AC A 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27757397 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1650;AVGPOST=0.9977;RSQ=0.9940;ERATE=0.0005;THETA=0.0014;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 27757418 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7259;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27757432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27757481 . TGAA T 560 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9735;ERATE=0.0002;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27757640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0198;AVGPOST=0.9994;RSQ=0.9868;ERATE=0.0004;THETA=0.0010;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 27757714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9162;ERATE=0.0002;THETA=0.0038;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27757716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0067;AVGPOST=0.9981;RSQ=0.8837;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27757742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0289;AVGPOST=0.9982;RSQ=0.9746;ERATE=0.0003;THETA=0.0012;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27757934 . A AT 2855 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0326;AVGPOST=0.9984;RSQ=0.9779;ERATE=0.0004;THETA=0.0012;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 27757960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9995;RSQ=0.9718;ERATE=0.0003;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27758082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9552;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27758127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9997;RSQ=0.9859;ERATE=0.0002;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27758152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0209;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0002;THETA=0.0018;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27758180 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27758401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27758583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8305;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27758598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.753;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8482;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27758609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0209;AVGPOST=0.9993;RSQ=0.9876;ERATE=0.0002;THETA=0.0014;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27758680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0209;AVGPOST=0.9993;RSQ=0.9854;ERATE=0.0004;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27758894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9282;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27758954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0206;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0003;THETA=0.0011;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27759000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9794;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27759009 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5159;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27759252 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27759267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0003;THETA=0.0012;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27759274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0144;AVGPOST=0.9993;RSQ=0.9819;ERATE=0.0002;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27759355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0142;AVGPOST=0.9995;RSQ=0.9836;ERATE=0.0002;THETA=0.0014;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27759406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0003;THETA=0.0013;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27759454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9993;RSQ=0.9614;ERATE=0.0003;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27759640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0035;AVGPOST=0.9963;RSQ=0.6146;ERATE=0.0004;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27759780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.608;LDAF=0.0041;AVGPOST=0.9963;RSQ=0.6636;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27759810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0285;AVGPOST=0.9992;RSQ=0.9873;ERATE=0.0002;THETA=0.0012;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27759859 . G GC 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6436;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27759895 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6239;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27759978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5348;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27760044 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8872;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27760207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27760279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27760304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27760354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5438;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27760435 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5527;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27760735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0212;AVGPOST=0.9987;RSQ=0.9785;ERATE=0.0002;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27760775 rs112553158 GA G 2229 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0200;AVGPOST=0.9992;RSQ=0.9838;ERATE=0.0003;THETA=0.0010;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 27760831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7787;ERATE=0.0002;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27760893 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0288;AVGPOST=0.9987;RSQ=0.9800;ERATE=0.0002;THETA=0.0010;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27760909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4829;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27760926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0031;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27760989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9180;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27761183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27761202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8772;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27761323 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27761495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9559;ERATE=0.0002;THETA=0.0029;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27761527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27761575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0189;AVGPOST=0.9990;RSQ=0.9795;ERATE=0.0002;THETA=0.0015;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27761580 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0146;AVGPOST=0.9985;RSQ=0.9604;ERATE=0.0002;THETA=0.0022;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27761581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8423;ERATE=0.0003;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27761605 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0002;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27761626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0201;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0016;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27761630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0047;AVGPOST=0.9975;RSQ=0.7734;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27761778 MERGED_DEL_2_3517 ATTAAAACAATAAATTATTCAGACTTTCTTAATGCAATAATTTTCATTGTGGGATTCTGTGCCAAAGACAGTATCCAGAATATAAAATGCACTTCTGTGAATGAAAGGGTTTATTGCAACATTACCTAAATTTAACACAAAAATTCAGAAGCAACCTGAATGCCTTAGCTATAGGTGGAAAGTTTAACTG A . . SV;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;CIEND=-78;75;CIPOS=-81;76;END=52751862;HOMLEN=2;HOMSEQ=TT;SOURCE=BreakDancer_52748267_52751850;EM GT:DS:GL:BD 0.00045788 0
1 27761888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7376;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27762013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0095;AVGPOST=0.9968;RSQ=0.8616;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27762044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27762126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27762232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8467;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27762269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5265;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27762375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8282;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27762407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0119;AVGPOST=0.9985;RSQ=0.9448;ERATE=0.0003;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27762630 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0407;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0002;THETA=0.0009;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 27762669 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27762677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9722;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27762810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6272;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27762908 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0071;AVGPOST=0.9975;RSQ=0.8634;ERATE=0.0004;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27763066 . TA T 549 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27763166 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27763172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0002;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27763211 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0178;AVGPOST=0.9996;RSQ=0.9900;ERATE=0.0002;THETA=0.0015;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27763233 . GTC G 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4815;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27763332 . GTCT G 2257 PASS INDEL;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0196;AVGPOST=0.9944;RSQ=0.8721;ERATE=0.0006;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27763380 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27763382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7178;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27763583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27763643 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5845;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27763765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.970;LDAF=0.2256;AVGPOST=0.9855;RSQ=0.9732;ERATE=0.0010;THETA=0.0009;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 27763790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0147;AVGPOST=0.9928;RSQ=0.8016;ERATE=0.0009;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27763848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0079;AVGPOST=0.9975;RSQ=0.8801;ERATE=0.0004;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27763903 . TG T 953 PASS INDEL;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0126;AVGPOST=0.9947;RSQ=0.8433;ERATE=0.0004;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27764088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9782;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27764120 . C CATAT 268 PASS INDEL;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5892;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27764187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9730;ERATE=0.0004;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27764224 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0100;AVGPOST=0.9991;RSQ=0.9578;ERATE=0.0004;THETA=0.0020;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27764237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27764377 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27764522 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8282;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27764575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0054;AVGPOST=0.9981;RSQ=0.8611;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27764655 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0042;AVGPOST=0.9961;RSQ=0.6596;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27764676 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8844;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27764707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27764831 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27764915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9357;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27765061 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.5953;ERATE=0.0004;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27765121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7109;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27765167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.8990;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27765174 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6258;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27765317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7303;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27765723 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8382;ERATE=0.0004;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27765728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27765844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0308;AVGPOST=0.9994;RSQ=0.9908;ERATE=0.0004;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 27765856 . TA T 115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3940;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27765860 . AT A 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5684;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27765863 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27766000 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8316;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27766024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9386;ERATE=0.0002;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27766106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0423;AVGPOST=0.9990;RSQ=0.9893;ERATE=0.0003;THETA=0.0008;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 27766124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1139;AVGPOST=0.9953;RSQ=0.9815;ERATE=0.0003;THETA=0.0006;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 27766139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6776;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27766228 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5516;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27766301 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8170;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27766337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8174;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27766343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4818;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27766416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7755;ERATE=0.0004;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27766421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.516;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6705;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27766438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0034;AVGPOST=0.9952;RSQ=0.4161;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27766466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0064;AVGPOST=0.9978;RSQ=0.8584;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27766578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0064;AVGPOST=0.9978;RSQ=0.8735;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27766617 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0053;AVGPOST=0.9966;RSQ=0.7490;ERATE=0.0006;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27766626 . GC G 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5175;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27766681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27766692 rs57308286 TAGG T 5921 PASS INDEL;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0287;AVGPOST=0.9992;RSQ=0.9877;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27766791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27766799 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5118;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27766831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27766913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9986;RSQ=0.9246;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27767021 . C CA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27767065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0192;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27767088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7792;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27767132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27767156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.9087;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27767180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7617;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27767229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0385;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0005;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 27767242 . TGTGTGAACCCG T 458 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27767306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0002;THETA=0.0022;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27767353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.9207;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27767472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0111;AVGPOST=0.9984;RSQ=0.9346;ERATE=0.0005;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27767517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8788;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27767659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0639;AVGPOST=0.9992;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 27767700 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27767820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27767825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0623;AVGPOST=0.9987;RSQ=0.9928;ERATE=0.0004;THETA=0.0005;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 27767830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9992;RSQ=0.9637;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27767849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0638;AVGPOST=0.9990;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 27767876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6672;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0006;THETA=0.0006;AC=1457;AN=2184 GT:DS:GL:BD 0.66712457 1
1 27767884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0643;AVGPOST=0.9991;RSQ=0.9940;ERATE=0.0004;THETA=0.0006;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 27767919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9002;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27768051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6081;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27768082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9360;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27768146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27768168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27768176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0002;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 27768299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27768314 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8032;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27768345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1145;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0004;THETA=0.0006;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27768349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27768359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0648;AVGPOST=0.9987;RSQ=0.9927;ERATE=0.0003;THETA=0.0006;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 27768401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0636;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0002;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 27768414 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9700;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27768448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8866;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27768493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27768503 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0266;AVGPOST=0.9984;RSQ=0.9765;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 27768549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5821;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27768603 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3813;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27768626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6660;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0003;THETA=0.0013;AC=1454;AN=2184 GT:DS:GL:BD 0.66575092 1
1 27768640 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8550;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27768750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7493;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27768797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27768988 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9590;ERATE=0.0002;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27768998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27769016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27769056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27769187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9182;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27769252 rs111362507 T TTTTA 19300 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0636;AVGPOST=0.9989;RSQ=0.9928;ERATE=0.0004;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 27769318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27769352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27769432 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27769455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27769702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5202;AVGPOST=0.9966;RSQ=0.9955;ERATE=0.0003;THETA=0.0058;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 27769742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27769911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27769934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4889;AVGPOST=0.9952;RSQ=0.9936;ERATE=0.0004;THETA=0.0008;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 27770011 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27770191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0183;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0026;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 27770225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0418;AVGPOST=0.9961;RSQ=0.9619;ERATE=0.0005;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 27770273 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9018;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27770330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27770379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8557;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27770419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27770445 . A AG 2041 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0564;AVGPOST=0.9983;RSQ=0.9869;ERATE=0.0005;THETA=0.0040;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 27770621 rs113828478 G GA 10242 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0565;AVGPOST=0.9982;RSQ=0.9870;ERATE=0.0003;THETA=0.0051;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 27770624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0285;AVGPOST=0.9993;RSQ=0.9893;ERATE=0.0002;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27770654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27770677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9994;RSQ=0.9700;ERATE=0.0003;THETA=0.0027;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27770749 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9764;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27770757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7893;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27770775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8611;ERATE=0.0003;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27770780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27770821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27770845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8475;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27770846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4107;ERATE=0.0006;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27770874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8887;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27770883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.905;LDAF=0.0411;AVGPOST=0.9871;RSQ=0.8926;ERATE=0.0002;THETA=0.0011;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 27770885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.905;LDAF=0.0412;AVGPOST=0.9869;RSQ=0.8913;ERATE=0.0004;THETA=0.0012;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 27770887 . AT A 1948 PASS INDEL;BAVGPOST=0.995;BRSQ=0.941;LDAF=0.0422;AVGPOST=0.9947;RSQ=0.9445;ERATE=0.0007;THETA=0.0009;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 27770892 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0183;AVGPOST=0.9913;RSQ=0.8254;ERATE=0.0024;THETA=0.0069;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27770899 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0085;AVGPOST=0.9965;RSQ=0.8523;ERATE=0.0004;THETA=0.0033;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27770901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0099;AVGPOST=0.9977;RSQ=0.9017;ERATE=0.0005;THETA=0.0030;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27770980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0026;AVGPOST=0.9962;RSQ=0.3787;ERATE=0.0006;THETA=0.0061;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27770992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4338;ERATE=0.0005;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27771205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8789;ERATE=0.0003;THETA=0.0171;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27771394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5782;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27771422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9075;ERATE=0.0002;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27771446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.857;LDAF=0.0106;AVGPOST=0.9961;RSQ=0.8454;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27771469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.6729;AVGPOST=0.9828;RSQ=0.9705;ERATE=0.0006;THETA=0.0085;AC=1470;AN=2184 GT:DS:GL:BD 0.67307693 1
1 27771484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0084;AVGPOST=0.9982;RSQ=0.9115;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27771535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.3726;AVGPOST=0.9905;RSQ=0.9852;ERATE=0.0003;THETA=0.0014;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 27771761 . CTG C 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4851;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27771767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3724;AVGPOST=0.9917;RSQ=0.9871;ERATE=0.0003;THETA=0.0023;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 27771773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0002;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27771809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4937;AVGPOST=0.9929;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=1079;AN=2184 GT:DS:GL:BD 0.49404761 0
1 27771838 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9611;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27771850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0163;AVGPOST=0.9990;RSQ=0.9762;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27772018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.809;LDAF=0.0322;AVGPOST=0.9889;RSQ=0.8722;ERATE=0.0005;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 27772086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.956;LDAF=0.4558;AVGPOST=0.9585;RSQ=0.9418;ERATE=0.0025;THETA=0.0008;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 27772104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.825;LDAF=0.0449;AVGPOST=0.9803;RSQ=0.8220;ERATE=0.0015;THETA=0.0049;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 27772254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.867;LDAF=0.0698;AVGPOST=0.9675;RSQ=0.8185;ERATE=0.0025;THETA=0.0006;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 27772361 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.799;LDAF=0.0559;AVGPOST=0.9723;RSQ=0.8019;ERATE=0.0013;THETA=0.0005;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 27772390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.219;LDAF=0.0523;AVGPOST=0.9426;RSQ=0.5411;ERATE=0.0031;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 27772423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.664;BRSQ=0.261;LDAF=0.3689;AVGPOST=0.7010;RSQ=0.4800;ERATE=0.0180;THETA=0.0006;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 27772549 . ACCGC A 692 PASS INDEL;BAVGPOST=0.449;BRSQ=0.032;LDAF=0.3445;AVGPOST=0.6757;RSQ=0.4100;ERATE=0.0201;THETA=0.0005;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 27772646 . T TCGCCGC 344 PASS INDEL;BAVGPOST=0.411;BRSQ=0.017;LDAF=0.3061;AVGPOST=0.6103;RSQ=0.2167;ERATE=0.0254;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 27772789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.081;LDAF=0.1301;AVGPOST=0.8187;RSQ=0.3671;ERATE=0.0106;THETA=0.0007;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 27772814 rs3033693 TGCC T 1643 PASS INDEL;BAVGPOST=0.669;BRSQ=0.023;LDAF=0.7573;AVGPOST=0.7016;RSQ=0.3377;ERATE=0.0156;THETA=0.0005;AC=1779;AN=2184 GT:DS:GL:BD 0.81456041 1
1 27773115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.112;LDAF=0.1081;AVGPOST=0.8769;RSQ=0.4997;ERATE=0.0079;THETA=0.0013;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 27773173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.285;LDAF=0.0586;AVGPOST=0.9299;RSQ=0.5244;ERATE=0.0040;THETA=0.0015;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 27773327 . GC G 127 PASS INDEL;BAVGPOST=0.988;BRSQ=0.141;LDAF=0.0812;AVGPOST=0.8815;RSQ=0.3994;ERATE=0.0054;THETA=0.0009;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 27773492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.670;LDAF=0.0552;AVGPOST=0.9402;RSQ=0.5651;ERATE=0.0032;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 27773553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.376;LDAF=0.0109;AVGPOST=0.9944;RSQ=0.7865;ERATE=0.0006;THETA=0.0083;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27773625 . GCC G 156 PASS INDEL;BAVGPOST=0.998;BRSQ=0.515;LDAF=0.0036;AVGPOST=0.9960;RSQ=0.5182;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27774000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3492;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27774030 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5740;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27774033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5938;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27774098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6756;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27774145 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6384;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27774148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.957;LDAF=0.0872;AVGPOST=0.9964;RSQ=0.9835;ERATE=0.0005;THETA=0.0005;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 27774189 . A AG 52 PASS INDEL;BAVGPOST=0.994;BRSQ=0.469;LDAF=0.0184;AVGPOST=0.9699;RSQ=0.3248;ERATE=0.0043;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27774202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0099;AVGPOST=0.9952;RSQ=0.8102;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27774205 . GAC G 34 PASS INDEL;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6341;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27774272 . GT G 436 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0066;AVGPOST=0.9962;RSQ=0.7630;ERATE=0.0011;THETA=0.0040;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27774282 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27774287 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6151;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27774421 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4486;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27774461 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27774624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0566;AVGPOST=0.9988;RSQ=0.9909;ERATE=0.0004;THETA=0.0012;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 27774755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27774803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9995;RSQ=0.9852;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27774824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8921;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27774955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27775040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8574;ERATE=0.0004;THETA=0.0040;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27775233 . CA C 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5654;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27775370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27775391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27775411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8612;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27775459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0412;AVGPOST=0.9990;RSQ=0.9893;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 27775482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5223;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27775600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8020;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27775684 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0084;AVGPOST=0.9990;RSQ=0.9475;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27775707 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27775710 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0338;AVGPOST=0.9979;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 27775770 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0416;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 27775857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27775895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27775919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27776079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27776120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27776184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27776194 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27776195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7564;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27776199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27776222 . C CGA 1190 PASS INDEL;BAVGPOST=0.995;BRSQ=0.738;LDAF=0.0114;AVGPOST=0.9890;RSQ=0.6077;ERATE=0.0022;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27776259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5992;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27776265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27776339 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9674;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0027;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 27776391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27776468 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5542;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27776529 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27776539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27776551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9583;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27776577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4722;AVGPOST=0.9966;RSQ=0.9948;ERATE=0.0007;THETA=0.0008;AC=1032;AN=2184 GT:DS:GL:BD 0.47252747 0
1 27776807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0880;AVGPOST=0.9971;RSQ=0.9870;ERATE=0.0004;THETA=0.0003;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 27776869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8891;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27777015 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27777100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0173;AVGPOST=0.9982;RSQ=0.9659;ERATE=0.0003;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 27777126 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0219;AVGPOST=0.9991;RSQ=0.9886;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27777576 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27777685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9028;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27777755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27777756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1151;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27777762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1152;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27777813 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4779;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27777922 . T TA 117 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8624;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27777922 rs57035600 G GTCTCTTC 16113 PASS INDEL;BAVGPOST=0.983;BRSQ=0.919;LDAF=0.1139;AVGPOST=0.9934;RSQ=0.9758;ERATE=0.0011;THETA=0.0005;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 27777931 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.3998;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27777984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8934;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27778034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1154;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27778082 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3944;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 27778282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1150;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0007;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27778294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9750;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27778384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7129;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27778393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1152;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27778439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0947;AVGPOST=0.9982;RSQ=0.9914;ERATE=0.0004;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 27778457 . GA G 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27778461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27778602 rs67321721 TA T 8929 PASS INDEL;BAVGPOST=0.991;BRSQ=0.955;LDAF=0.1148;AVGPOST=0.9966;RSQ=0.9875;ERATE=0.0004;THETA=0.0003;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27778662 . AC A 740 PASS INDEL;BAVGPOST=0.990;BRSQ=0.951;LDAF=0.1136;AVGPOST=0.9961;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 27778664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27778683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0265;AVGPOST=0.9945;RSQ=0.9250;ERATE=0.0005;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27778691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27778741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8950;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27778744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0039;AVGPOST=0.9993;RSQ=0.9437;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27778745 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27778766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2622;AVGPOST=0.9977;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 27778803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27778810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27778828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27778891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9643;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27778906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27779054 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27779094 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27779116 . G GT 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6262;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27779161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9221;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27779172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1147;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27779179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4196;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 27779194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8316;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27779230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1152;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27779268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8791;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27779316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9552;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27779321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27779348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9509;ERATE=0.0003;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27779390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8499;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27779407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6474;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27779425 . GA G 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5894;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27779445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4978;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27779493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1156;AVGPOST=0.9981;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 27779579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27779607 . TC T 68 PASS INDEL;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6923;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27779674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27779707 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9143;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27779727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0252;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0018;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 27779755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27779996 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27780023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9995;RSQ=0.9621;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27780036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7384;ERATE=0.0003;THETA=0.0070;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27780074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27780120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2586;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0004;THETA=0.0007;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 27780132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1153;AVGPOST=0.9990;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27780197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6761;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27780221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27780223 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5687;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27780253 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0047;AVGPOST=0.9980;RSQ=0.8466;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27780435 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9639;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27780438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27780442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27780460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6612;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27780582 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7859;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27780755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5588;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27780764 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.832;LDAF=0.0050;AVGPOST=0.9971;RSQ=0.7722;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27780809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0175;AVGPOST=0.9984;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27780870 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27781130 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27781136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0935;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 27781137 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6683;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27781138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1150;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 27781176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27781190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9568;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27781195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7263;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27781235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9668;ERATE=0.0003;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27781244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27781323 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7510;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27781565 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27781591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9633;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27781610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1155;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 27781769 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8729;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27781817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27781879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27781886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0143;AVGPOST=0.9990;RSQ=0.9686;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27781894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0590;AVGPOST=0.9989;RSQ=0.9911;ERATE=0.0003;THETA=0.0002;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 27781907 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27782064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7018;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27782139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27782169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27782185 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5020;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27782195 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0248;AVGPOST=0.9989;RSQ=0.9807;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 27782280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27782291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1209;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 27782295 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27782336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27782347 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27782434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4325;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27782473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8859;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27782534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0274;AVGPOST=0.9988;RSQ=0.9816;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 27782641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0581;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 27782658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27782659 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4118;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 27782753 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1202;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 27782777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8144;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27782816 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7388;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27782964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27783023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27783033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1259;AVGPOST=0.9986;RSQ=0.9955;ERATE=0.0003;THETA=0.0008;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 27783070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6132;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27783124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.8172;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27783233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4112;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0008;THETA=0.0005;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 27783294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0102;AVGPOST=0.9982;RSQ=0.9349;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27783383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0474;AVGPOST=0.9964;RSQ=0.9723;ERATE=0.0004;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 27783481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27783575 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27783658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9038;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27783671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8976;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27783763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9221;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27783892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3489;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0011;THETA=0.0018;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 27783922 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0640;AVGPOST=0.9988;RSQ=0.9926;ERATE=0.0004;THETA=0.0005;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 27783958 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6924;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27783986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27784017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9122;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27784083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6406;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27784267 . TCTA T 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27784455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0638;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 27784574 . TATG T 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27784733 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4347;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 27784817 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9494;AVGPOST=0.9992;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=2073;AN=2184 GT:DS:GL:BD 0.94917583 1
1 27784908 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0198;AVGPOST=0.9988;RSQ=0.9720;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27784933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6992;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27784978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7951;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27785009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27785061 . A AG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7361;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27785067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0143;AVGPOST=0.9989;RSQ=0.9703;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27785080 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6611;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27785181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0915;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 27785203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27785231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0122;AVGPOST=0.9963;RSQ=0.8784;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27785255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0199;AVGPOST=0.9986;RSQ=0.9770;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27785387 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27785421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7085;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27785572 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9651;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27785753 . ATC A 12758 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0861;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0006;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 27785889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0314;AVGPOST=0.9943;RSQ=0.9307;ERATE=0.0005;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 27785933 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.4394;AVGPOST=0.9938;RSQ=0.9910;ERATE=0.0008;THETA=0.0004;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 27785983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27785989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6925;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27786005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0610;AVGPOST=0.9952;RSQ=0.9690;ERATE=0.0017;THETA=0.0003;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 27786070 . AAG A 1148 PASS INDEL;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0118;AVGPOST=0.9983;RSQ=0.9446;ERATE=0.0003;THETA=0.0025;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27786152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27786220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4448;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0005;THETA=0.0011;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 27786226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27786380 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8888;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27786395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27786567 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5386;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27786619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1436;AVGPOST=0.9957;RSQ=0.9883;ERATE=0.0004;THETA=0.0003;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 27786620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4416;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 27786632 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9731;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27786665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27786686 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27786708 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9744;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27786745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27786756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9629;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27786790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27786820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2101;AVGPOST=0.9963;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 27786855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27787012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9988;RSQ=0.9423;ERATE=0.0004;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27787045 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9755;ERATE=0.0003;THETA=0.0015;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27787102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0096;AVGPOST=0.9996;RSQ=0.9822;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27787156 . AAT A 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8305;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27787212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.5943;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27787223 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4992;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27787258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5057;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27787293 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9821;ERATE=0.0004;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27787354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.551;LDAF=0.0018;AVGPOST=0.9972;RSQ=0.2864;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27787357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0094;AVGPOST=0.9993;RSQ=0.9662;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27787546 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.922;LDAF=0.0562;AVGPOST=0.9899;RSQ=0.9305;ERATE=0.0005;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 27787701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9666;AVGPOST=0.9991;RSQ=0.9895;ERATE=0.0004;THETA=0.0002;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 27787710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27787755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2120;AVGPOST=0.9946;RSQ=0.9900;ERATE=0.0004;THETA=0.0009;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 27787784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27787867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27788142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5847;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27788166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27788177 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0422;AVGPOST=0.9980;RSQ=0.9826;ERATE=0.0004;THETA=0.0014;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 27788422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27788447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27788472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27788562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5142;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27788590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27788794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8618;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27788838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27789224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.5574;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27789311 . TC T 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0044;AVGPOST=0.9948;RSQ=0.5767;ERATE=0.0007;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27789339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8150;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27789340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6828;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27789342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27789359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7966;ERATE=0.0005;THETA=0.0038;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27789382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27789477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9674;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=2113;AN=2184 GT:DS:GL:BD 0.96749085 1
1 27789501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27789566 . AC A 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27789624 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7248;AVGPOST=0.9948;RSQ=0.9901;ERATE=0.0006;THETA=0.0002;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 27789698 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7414;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27789704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6995;AVGPOST=0.9961;RSQ=0.9930;ERATE=0.0004;THETA=0.0006;AC=1526;AN=2184 GT:DS:GL:BD 0.69871795 1
1 27789717 . TCC T 384 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.5980;ERATE=0.0004;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27789822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27789826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27789925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.971;LDAF=0.6294;AVGPOST=0.9850;RSQ=0.9756;ERATE=0.0006;THETA=0.0135;AC=1379;AN=2184 GT:DS:GL:BD 0.63141024 1
1 27789971 . A AGACTT 357 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4311;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27789975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.6221;ERATE=0.0003;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27790064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0064;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27790104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27790222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9773;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27790252 rs75167684 TAAG T 1386 PASS INDEL;BAVGPOST=0.995;BRSQ=0.808;LDAF=0.0099;AVGPOST=0.9944;RSQ=0.7920;ERATE=0.0005;THETA=0.0020;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27790437 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27790494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8262;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27790617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9987;RSQ=0.9553;ERATE=0.0003;THETA=0.0107;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27790670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9584;ERATE=0.0003;THETA=0.0048;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27790717 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0236;AVGPOST=0.9992;RSQ=0.9856;ERATE=0.0003;THETA=0.0028;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27790752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0114;AVGPOST=0.9973;RSQ=0.9120;ERATE=0.0005;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27790949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8641;ERATE=0.0007;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27790966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0463;AVGPOST=0.9980;RSQ=0.9831;ERATE=0.0004;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 27791038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8270;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27791054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2698;AVGPOST=0.9896;RSQ=0.9785;ERATE=0.0005;THETA=0.0004;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 27791179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0083;AVGPOST=0.9984;RSQ=0.9084;ERATE=0.0006;THETA=0.0031;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27791190 . GC G 1624 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0239;AVGPOST=0.9985;RSQ=0.9746;ERATE=0.0004;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27791190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8367;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27791281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.924;LDAF=0.1467;AVGPOST=0.9773;RSQ=0.9387;ERATE=0.0004;THETA=0.0007;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 27791358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9193;ERATE=0.0004;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27791424 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27791472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9105;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27791505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27791783 . A AT 195 PASS INDEL;BAVGPOST=0.994;BRSQ=0.575;LDAF=0.0121;AVGPOST=0.9855;RSQ=0.5217;ERATE=0.0033;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27791988 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5015;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27792009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5406;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27792022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6171;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27792129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2612;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0007;THETA=0.0002;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 27792132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27792168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9020;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27792223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27792269 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2473;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 27792281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27792473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5126;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27792586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2604;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0005;THETA=0.0003;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 27792616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2613;AVGPOST=0.9986;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 27792642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2633;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 27792692 . G GCTGCACC 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0043;AVGPOST=0.9959;RSQ=0.6400;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27792759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.724;LDAF=0.0124;AVGPOST=0.9967;RSQ=0.8965;ERATE=0.0005;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27792846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.9110;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27792852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2496;AVGPOST=0.9940;RSQ=0.9875;ERATE=0.0006;THETA=0.0003;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 27792909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9969;RSQ=0.7030;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27792971 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27793026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.493;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4428;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27793041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3755;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27793042 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2628;AVGPOST=0.9952;RSQ=0.9895;ERATE=0.0012;THETA=0.0003;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 27793077 . C CT 331 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.8978;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27793165 rs35924978 TAATA T 15436 PASS INDEL;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2651;AVGPOST=0.9798;RSQ=0.9594;ERATE=0.0027;THETA=0.0002;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 27793179 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0077;AVGPOST=0.9949;RSQ=0.7251;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27793237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27793376 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2470;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 27793434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8413;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27793591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2633;AVGPOST=0.9972;RSQ=0.9949;ERATE=0.0006;THETA=0.0003;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 27793624 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.6008;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27793644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27793735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8840;AVGPOST=0.9979;RSQ=0.9905;ERATE=0.0005;THETA=0.0003;AC=1932;AN=2184 GT:DS:GL:BD 0.88461536 1
1 27793818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0083;AVGPOST=0.9985;RSQ=0.9422;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27793913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27793967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6371;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27793986 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2608;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 27794171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27794177 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2618;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 27794226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0266;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27794235 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27794281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9307;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27794295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6880;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27794382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27794432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6574;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27794467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27794522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9990;RSQ=0.9760;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27794539 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27794547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6565;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27794598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8038;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27794614 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4965;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27794628 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0092;AVGPOST=0.9991;RSQ=0.9556;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27794700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5764;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27794783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2616;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 27794844 . CCT C 152 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7476;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27794865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27794967 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27795012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0054;AVGPOST=0.9997;RSQ=0.9806;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27795052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1825;AVGPOST=0.9983;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 27795106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2611;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 27795147 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7834;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27795196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2539;AVGPOST=0.9972;RSQ=0.9939;ERATE=0.0007;THETA=0.0002;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 27795405 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8849;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=1932;AN=2184 GT:DS:GL:BD 0.88461536 1
1 27795435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9141;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27795457 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27795481 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.965;LDAF=0.1283;AVGPOST=0.9921;RSQ=0.9707;ERATE=0.0005;THETA=0.0008;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 27795504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6217;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0007;THETA=0.0004;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 27795539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4815;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27795608 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7762;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27795672 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7661;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27795675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6229;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0005;THETA=0.0006;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 27795701 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2326;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 27795735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9114;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27795784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27795811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6230;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 27795999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9993;RSQ=0.9750;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27796051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6221;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 27796075 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27796078 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.899;LDAF=0.8469;AVGPOST=0.9622;RSQ=0.8914;ERATE=0.0030;THETA=0.0003;AC=1872;AN=2184 GT:DS:GL:BD 0.85714287 1
1 27796130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4673;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27796192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.910;LDAF=0.8588;AVGPOST=0.9822;RSQ=0.9426;ERATE=0.0014;THETA=0.0004;AC=1885;AN=2184 GT:DS:GL:BD 0.86309522 1
1 27796242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1827;AVGPOST=0.9979;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 27796461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8844;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27796496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6182;AVGPOST=0.9927;RSQ=0.9890;ERATE=0.0019;THETA=0.0003;AC=1350;AN=2184 GT:DS:GL:BD 0.61813188 1
1 27796552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7078;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27796646 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27796711 . GTC G 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0037;AVGPOST=0.9955;RSQ=0.5599;ERATE=0.0008;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27796774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27796973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27797062 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.959;LDAF=0.0442;AVGPOST=0.9949;RSQ=0.9532;ERATE=0.0007;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 27797064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27797089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27797245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6277;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27797289 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9687;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27797328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6652;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27797338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0154;AVGPOST=0.9979;RSQ=0.9527;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27797349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27797354 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27797637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27797806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0157;AVGPOST=0.9985;RSQ=0.9656;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27797841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27797984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0251;AVGPOST=0.9968;RSQ=0.9463;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 27797994 . A AGCCCT 2191 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27798001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9188;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27798005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4486;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27798045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2588;AVGPOST=0.9967;RSQ=0.9934;ERATE=0.0005;THETA=0.0004;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 27798188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27798472 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4423;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=965;AN=2184 GT:DS:GL:BD 0.44184983 0
1 27798482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27798564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27798572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8833;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27798610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0607;AVGPOST=0.9951;RSQ=0.9669;ERATE=0.0005;THETA=0.0005;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 27798611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7520;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=1642;AN=2184 GT:DS:GL:BD 0.75183153 1
1 27798680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27798713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7484;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=1633;AN=2184 GT:DS:GL:BD 0.74771065 1
1 27798863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.967;LDAF=0.2277;AVGPOST=0.9850;RSQ=0.9706;ERATE=0.0028;THETA=0.0002;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 27798918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0451;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 27798945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27798957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0239;AVGPOST=0.9989;RSQ=0.9849;ERATE=0.0004;THETA=0.0015;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27798995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1159;AVGPOST=0.9949;RSQ=0.9809;ERATE=0.0005;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 27799058 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.2741;ERATE=0.0005;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27799097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27799167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27799203 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8839;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27799385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8119;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27799438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27799441 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27799445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27799515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27799744 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8083;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27799863 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9031;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27800017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27800035 . TG T 282 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0036;AVGPOST=0.9969;RSQ=0.6930;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27800082 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5926;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27800223 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27800233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0065;AVGPOST=0.9991;RSQ=0.9384;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27800311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8188;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27800318 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27800443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27800481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7673;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27800620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0130;AVGPOST=0.9992;RSQ=0.9721;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27800897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27800997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7862;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27801082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0085;AVGPOST=0.9988;RSQ=0.9355;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27801113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.7490;AVGPOST=0.9921;RSQ=0.9837;ERATE=0.0044;THETA=0.0005;AC=1637;AN=2184 GT:DS:GL:BD 0.74954212 1
1 27801140 . CTAA C 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5418;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27801173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27801192 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9335;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27801217 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27801316 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8997;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27801461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.490;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6523;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27801477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27801521 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6787;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27801688 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7743;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27801689 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27801728 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0016;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27801771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5377;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27801881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.586;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4801;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27801889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.0982;AVGPOST=0.9958;RSQ=0.9833;ERATE=0.0004;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 27802000 . C CA 80 PASS INDEL;BAVGPOST=0.996;BRSQ=0.500;LDAF=0.0031;AVGPOST=0.9961;RSQ=0.5070;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27802005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27802179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7515;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27802293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27802339 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27802411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27802442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27802464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1336;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0003;THETA=0.0009;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 27802480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4448;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27802549 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.4716;AVGPOST=0.9750;RSQ=0.9624;ERATE=0.0044;THETA=0.0015;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 27802649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7294;ERATE=0.0004;THETA=0.0072;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27802698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27802774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2391;AVGPOST=0.9944;RSQ=0.9882;ERATE=0.0004;THETA=0.0071;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 27802827 . A AC 14532 PASS INDEL;BAVGPOST=0.979;BRSQ=0.962;LDAF=0.3659;AVGPOST=0.9840;RSQ=0.9778;ERATE=0.0004;THETA=0.0004;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 27802994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.3645;AVGPOST=0.9837;RSQ=0.9774;ERATE=0.0008;THETA=0.0006;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 27802995 . TG T 10105 PASS INDEL;BAVGPOST=0.977;BRSQ=0.959;LDAF=0.3624;AVGPOST=0.9794;RSQ=0.9700;ERATE=0.0007;THETA=0.0001;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 27802998 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.3667;AVGPOST=0.9860;RSQ=0.9806;ERATE=0.0003;THETA=0.0013;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 27802999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27803005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2588;AVGPOST=0.9879;RSQ=0.9788;ERATE=0.0007;THETA=0.0054;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 27803016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4586;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27803109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7244;ERATE=0.0004;THETA=0.0076;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27803140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8283;ERATE=0.0004;THETA=0.0062;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27803180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27803198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3022;AVGPOST=0.9941;RSQ=0.9892;ERATE=0.0006;THETA=0.0008;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 27803211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27803428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0229;AVGPOST=0.9974;RSQ=0.9594;ERATE=0.0003;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27803456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27803482 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.7957;ERATE=0.0003;THETA=0.0039;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27803503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7652;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27803551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1293;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 27803602 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6131;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27803618 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2479;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 27803630 . TAC T 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6640;ERATE=0.0005;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27803689 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8930;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27803694 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27803698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7621;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27803754 . TTTTTG T 604 PASS INDEL;BAVGPOST=0.996;BRSQ=0.776;LDAF=0.0107;AVGPOST=0.9969;RSQ=0.8720;ERATE=0.0008;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27803775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.955;LDAF=0.3845;AVGPOST=0.9706;RSQ=0.9556;ERATE=0.0077;THETA=0.0006;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 27803790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0025;AVGPOST=0.9960;RSQ=0.3207;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27803916 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.3752;AVGPOST=0.9819;RSQ=0.9718;ERATE=0.0020;THETA=0.0002;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 27803920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0754;AVGPOST=0.9967;RSQ=0.9804;ERATE=0.0004;THETA=0.0007;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 27803935 . TG T 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6949;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27804083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3964;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0003;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 27804111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27804150 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27804245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6234;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27804260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.857;LDAF=0.0494;AVGPOST=0.9848;RSQ=0.8804;ERATE=0.0004;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 27804294 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0072;AVGPOST=0.9983;RSQ=0.8995;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27804314 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3691;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 27804333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9984;RSQ=0.9684;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27804455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7476;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27804525 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6819;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27804555 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4536;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27804570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1150;AVGPOST=0.9978;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 27804587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27804625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0753;AVGPOST=0.9988;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 27804679 . C CG 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0056;AVGPOST=0.9947;RSQ=0.6212;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27804679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1154;AVGPOST=0.9987;RSQ=0.9947;ERATE=0.0003;THETA=0.0001;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27804750 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3999;AVGPOST=0.9943;RSQ=0.9910;ERATE=0.0009;THETA=0.0007;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 27805038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9987;RSQ=0.9415;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27805122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6563;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27805164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0163;AVGPOST=0.9995;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27805169 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9990;RSQ=0.9576;ERATE=0.0004;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27805184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7156;ERATE=0.0008;THETA=0.0056;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27805292 . T TTA 1591 PASS INDEL;BAVGPOST=0.833;BRSQ=0.612;LDAF=0.2978;AVGPOST=0.8046;RSQ=0.6053;ERATE=0.0423;THETA=0.0058;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 27805356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7441;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27805400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6136;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27805624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9984;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27805698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7201;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27805705 . CA C 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7222;ERATE=0.0003;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27805711 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0130;AVGPOST=0.9993;RSQ=0.9788;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27805719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0056;AVGPOST=0.9945;RSQ=0.6154;ERATE=0.0010;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27805761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27805879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27805927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8288;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27806027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3602;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0008;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 27806051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3597;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 27806104 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7024;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27806431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7876;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27806554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8765;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27806569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4279;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27806633 . TC T 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27806661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8813;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27806716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.936;LDAF=0.0652;AVGPOST=0.9937;RSQ=0.9649;ERATE=0.0004;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 27806985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2452;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0004;THETA=0.0011;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 27807009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9125;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27807046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27807164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9535;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27807449 . C CTA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27807552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27807739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27807785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27807863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27808065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8482;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27808244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27808272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27808354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27808504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8778;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27808581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0756;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 27808642 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27808668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5833;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27808887 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0206;AVGPOST=0.9994;RSQ=0.9873;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27808915 . C CCAGCAA 6122 PASS INDEL;BAVGPOST=0.995;BRSQ=0.867;LDAF=0.0205;AVGPOST=0.9961;RSQ=0.9226;ERATE=0.0009;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27808917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27809001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27809165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5973;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27809286 . TA T 355 PASS INDEL;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8709;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27809298 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0258;AVGPOST=0.9986;RSQ=0.9770;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 27809385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5531;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27809653 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27809676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27809833 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0125;AVGPOST=0.9981;RSQ=0.9441;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27809865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7377;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27809903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27810059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27810148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27810190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27810232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27810251 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0201;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0004;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27810305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8305;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27810510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27810581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0050;AVGPOST=0.9980;RSQ=0.8287;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27810603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27810608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0044;AVGPOST=0.9976;RSQ=0.7959;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27810609 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0754;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0004;THETA=0.0008;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 27810611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9153;ERATE=0.0004;THETA=0.0036;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27810650 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5861;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27810739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.7941;AVGPOST=0.9888;RSQ=0.9766;ERATE=0.0013;THETA=0.0039;AC=1737;AN=2184 GT:DS:GL:BD 0.79532969 1
1 27810803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4437;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27810810 . C CA 657 PASS INDEL;BAVGPOST=0.858;BRSQ=0.343;LDAF=0.2001;AVGPOST=0.7565;RSQ=0.3533;ERATE=0.0535;THETA=0.0005;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 27810878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.913;LDAF=0.0462;AVGPOST=0.9874;RSQ=0.8857;ERATE=0.0004;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 27810893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0739;AVGPOST=0.9947;RSQ=0.9686;ERATE=0.0004;THETA=0.0007;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 27810967 . TAA T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4675;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27811193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4394;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27811208 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7079;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27811249 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27811262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9194;ERATE=0.0003;THETA=0.0061;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27811290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9625;ERATE=0.0007;THETA=0.0022;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27811335 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0651;AVGPOST=0.9992;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 27811393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8655;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27811602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9829;ERATE=0.0004;THETA=0.0019;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27811631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6412;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27811698 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0067;AVGPOST=0.9974;RSQ=0.8473;ERATE=0.0011;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27811707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9500;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27811729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7233;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27811759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27811801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1173;AVGPOST=0.9926;RSQ=0.9717;ERATE=0.0004;THETA=0.0004;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 27811885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27812150 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8663;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27812151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9308;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27812168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7620;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27812182 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0009;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 27812232 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27812260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8366;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27812275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6794;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27812307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0045;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27812314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9456;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27812322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7644;ERATE=0.0003;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27812368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27812685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27812693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27812714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27812876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27812925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5310;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 27812936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27813000 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27813048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27813071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27813119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27813167 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27813209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6108;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27813300 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3777;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27813380 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27813499 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27813702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27813800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27813808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27813840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27813842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27813938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4406;AVGPOST=0.9975;RSQ=0.9960;ERATE=0.0005;THETA=0.0003;AC=962;AN=2184 GT:DS:GL:BD 0.44047618 0
1 27814044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27814143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5561;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27814180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0257;AVGPOST=0.9984;RSQ=0.9768;ERATE=0.0003;THETA=0.0012;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27814283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0483;AVGPOST=0.9993;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 27814508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27814565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0070;AVGPOST=0.9979;RSQ=0.8785;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27814653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0050;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27814670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.973;LDAF=0.4420;AVGPOST=0.9775;RSQ=0.9666;ERATE=0.0014;THETA=0.0011;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 27814765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.469;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0115;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27814870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0125;AVGPOST=0.9959;RSQ=0.8542;ERATE=0.0006;THETA=0.0042;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27815136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27815296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27815324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8897;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27815336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6550;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27815381 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27815428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27815480 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8493;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27815724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6125;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27815758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0295;AVGPOST=0.9993;RSQ=0.9907;ERATE=0.0004;THETA=0.0007;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 27816004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7981;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27816072 . CT C 363 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7850;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27816186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3026;AVGPOST=0.9950;RSQ=0.9907;ERATE=0.0005;THETA=0.0025;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 27816208 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0081;AVGPOST=0.9991;RSQ=0.9537;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27816260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8825;AVGPOST=0.9970;RSQ=0.9884;ERATE=0.0003;THETA=0.0005;AC=1927;AN=2184 GT:DS:GL:BD 0.88232601 1
1 27816307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.947;LDAF=0.0371;AVGPOST=0.9972;RSQ=0.9705;ERATE=0.0004;THETA=0.0009;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 27816355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6808;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27816412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0216;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27816417 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0201;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27816447 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6948;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27816448 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9994;RSQ=0.9834;ERATE=0.0003;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27816468 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9748;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27816522 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6570;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27816555 . TCTCA T 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27816575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27816631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0298;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 27816648 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27816659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0474;AVGPOST=0.9969;RSQ=0.9729;ERATE=0.0004;THETA=0.0008;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 27816662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0222;AVGPOST=0.9989;RSQ=0.9793;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 27816663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0285;AVGPOST=0.9996;RSQ=0.9930;ERATE=0.0004;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27816694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27816713 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7965;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27816814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27816863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0115;AVGPOST=0.9983;RSQ=0.9384;ERATE=0.0005;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27816864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0537;AVGPOST=0.9984;RSQ=0.9873;ERATE=0.0003;THETA=0.0010;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 27817190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.656;LDAF=0.0322;AVGPOST=0.9670;RSQ=0.5866;ERATE=0.0093;THETA=0.0009;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27817231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9437;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27817303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8811;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27817537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27817595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27817652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9530;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27817805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27817942 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27818143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0273;AVGPOST=0.9970;RSQ=0.9561;ERATE=0.0005;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27818155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9991;RSQ=0.9813;ERATE=0.0004;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27818185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27818294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27818332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27818444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4754;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27818452 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5316;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27818466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0086;AVGPOST=0.9987;RSQ=0.9480;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27818471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27818525 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4562;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27818576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6114;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27818901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0116;AVGPOST=0.9982;RSQ=0.9345;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27819058 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27819062 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6858;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27819084 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0060;AVGPOST=0.9987;RSQ=0.9206;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27819112 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7977;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=1742;AN=2184 GT:DS:GL:BD 0.79761904 1
1 27819140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8903;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27819179 . CTAATA C 243 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5037;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27819267 . TTTA T 2466 PASS INDEL;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0214;AVGPOST=0.9982;RSQ=0.9675;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27819276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27819339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8566;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27819373 . TG T 1917 PASS INDEL;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9836;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27819406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27819423 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6327;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27819501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8534;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27819592 . AT A 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8449;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27819696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27819765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2924;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0005;THETA=0.0004;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 27819815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27819853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8432;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27819859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27820264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7948;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27820265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8844;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27820276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0077;AVGPOST=0.9981;RSQ=0.9119;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27820280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2706;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0004;THETA=0.0005;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 27820382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.9131;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27820387 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6177;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27820516 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6809;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27820582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9996;RSQ=0.9919;ERATE=0.0004;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27820661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8295;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27820700 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.723;LDAF=0.0394;AVGPOST=0.9643;RSQ=0.6348;ERATE=0.0147;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 27820775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6118;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27820792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5805;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27820826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8455;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27820832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9875;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27820853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6729;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27820872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6830;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27821034 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2986;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 27821041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9765;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27821082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0262;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 27821084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6180;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27821093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5343;ERATE=0.0008;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27821100 . T TG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4772;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27821362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9861;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27821425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6751;ERATE=0.0009;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27821535 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27821656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27821666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27821730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27821744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27821873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27821983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27822069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6622;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27822110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0225;AVGPOST=0.9995;RSQ=0.9900;ERATE=0.0004;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27822112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6472;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27822129 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8675;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27822325 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27822384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6898;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27822433 . GA G 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6440;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27822592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27822630 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27822667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0260;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 27822743 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5296;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27822830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27822908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7355;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27822919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.925;LDAF=0.0404;AVGPOST=0.9961;RSQ=0.9602;ERATE=0.0007;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 27822952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9994;RSQ=0.9720;ERATE=0.0003;THETA=0.0029;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27823115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27823281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9509;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27823423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4737;ERATE=0.0006;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27823461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27823493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27823499 rs35829909 AT A 6789 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0368;AVGPOST=0.9978;RSQ=0.9774;ERATE=0.0003;THETA=0.0009;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 27823549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0161;AVGPOST=0.9962;RSQ=0.9094;ERATE=0.0005;THETA=0.0016;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27823840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5509;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27823938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5793;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27824013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7610;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27824041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27824079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27824189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2418;AVGPOST=0.9969;RSQ=0.9936;ERATE=0.0006;THETA=0.0010;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 27824255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27824286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9900;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 27824305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9215;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27824318 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.6796;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27824338 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27824375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9402;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27824388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8134;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27824427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27824806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0175;AVGPOST=0.9988;RSQ=0.9745;ERATE=0.0003;THETA=0.0018;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 27824847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0185;AVGPOST=0.9986;RSQ=0.9754;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27824946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8266;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27824992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8121;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27825321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6786;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27825362 . T TG 846 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0106;AVGPOST=0.9991;RSQ=0.9630;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27825362 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27825380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6552;ERATE=0.0004;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27825511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5453;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27825560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.867;LDAF=0.0178;AVGPOST=0.9960;RSQ=0.9129;ERATE=0.0006;THETA=0.0015;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27825602 . C CT 497 PASS INDEL;BAVGPOST=0.988;BRSQ=0.632;LDAF=0.0287;AVGPOST=0.9671;RSQ=0.5217;ERATE=0.0090;THETA=0.0010;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27826055 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0161;AVGPOST=0.9995;RSQ=0.9859;ERATE=0.0004;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27826091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0099;AVGPOST=0.9983;RSQ=0.9307;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27826129 rs111991178 CTCCCCT C 4765 PASS INDEL;BAVGPOST=0.992;BRSQ=0.963;LDAF=0.1009;AVGPOST=0.9742;RSQ=0.8953;ERATE=0.0019;THETA=0.0011;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 27826228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8887;ERATE=0.0004;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27826304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0992;AVGPOST=0.9987;RSQ=0.9938;ERATE=0.0004;THETA=0.0005;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 27826423 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0676;AVGPOST=0.9990;RSQ=0.9936;ERATE=0.0003;THETA=0.0007;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 27826563 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27826709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9564;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27826746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9809;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27827033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27827083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27827268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27827567 . AT A 250 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8270;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27827592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27827657 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7842;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27827792 rs66540988 CTG C 14551 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1333;AVGPOST=0.9986;RSQ=0.9949;ERATE=0.0005;THETA=0.0002;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 27828467 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1036;AVGPOST=0.9980;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 27828475 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1325;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 27828494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27828617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27828659 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27828679 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9580;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27828711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9801;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27828794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27828840 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8564;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27828869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7666;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27828884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5241;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 27828989 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1647;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 27829034 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8390;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27829199 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27829280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4025;AVGPOST=0.9862;RSQ=0.9799;ERATE=0.0027;THETA=0.0006;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 27829367 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1654;AVGPOST=0.9973;RSQ=0.9940;ERATE=0.0004;THETA=0.0039;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 27829390 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0044;AVGPOST=0.9973;RSQ=0.8208;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27829464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0059;AVGPOST=0.9986;RSQ=0.8978;ERATE=0.0004;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27829496 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9557;ERATE=0.0003;THETA=0.0063;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27829593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0077;AVGPOST=0.9997;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27829757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8679;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27829790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1719;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 27829808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1041;AVGPOST=0.9986;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 27829842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1718;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 27829876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0164;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0016;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27829967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8382;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 27830005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9861;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27830096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27830332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6510;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27830392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0001;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 27830404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5159;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 27830415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6641;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27830422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27830493 . TATCATAG T 10266 PASS INDEL;BAVGPOST=0.990;BRSQ=0.839;LDAF=0.0327;AVGPOST=0.9917;RSQ=0.8959;ERATE=0.0004;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 27830518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27830574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9572;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27830634 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1353;AVGPOST=0.9990;RSQ=0.9964;ERATE=0.0005;THETA=0.0009;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 27830644 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8418;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27830656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27830710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7938;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27830805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9371;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27830910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1709;AVGPOST=0.9982;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 27830913 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6607;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27830977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1121;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0004;THETA=0.0002;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 27830994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5704;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27831030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0059;AVGPOST=0.9975;RSQ=0.8427;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27831067 . A AG 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6472;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27831074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4701;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27831259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27831306 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27831328 rs79424805 T TG 46300 PASS INDEL;BAVGPOST=0.993;BRSQ=0.937;LDAF=0.9426;AVGPOST=0.9821;RSQ=0.8817;ERATE=0.0042;THETA=0.0006;AC=2065;AN=2184 GT:DS:GL:BD 0.94551283 1
1 27831348 rs59159390 G GA 133676 PASS INDEL;BAVGPOST=0.992;BRSQ=0.937;LDAF=0.9448;AVGPOST=0.9842;RSQ=0.8901;ERATE=0.0048;THETA=0.0003;AC=2071;AN=2184 GT:DS:GL:BD 0.94826007 1
1 27831349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0144;AVGPOST=0.9964;RSQ=0.9130;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27831599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1207;AVGPOST=0.9976;RSQ=0.9912;ERATE=0.0005;THETA=0.0007;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 27831613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5536;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27831703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6578;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27831742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5935;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27831808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5675;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27831866 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9989;RSQ=0.9707;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27831869 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9377;ERATE=0.0003;THETA=0.0021;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27831915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8178;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27831960 . G GT 1462 PASS INDEL;BAVGPOST=0.978;BRSQ=0.912;LDAF=0.1439;AVGPOST=0.9351;RSQ=0.8020;ERATE=0.0021;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 27832036 rs71590341 T TA 13219 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1244;AVGPOST=0.9980;RSQ=0.9925;ERATE=0.0005;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 27832038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1345;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 27832066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27832089 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27832122 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3535;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 27832264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.937;LDAF=0.0426;AVGPOST=0.9939;RSQ=0.9401;ERATE=0.0004;THETA=0.0002;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 27832270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9826;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27832369 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8360;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27832390 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5442;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27832438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6805;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27832493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27832514 rs74261225 CAAAACAAAA C 93558 PASS INDEL;BAVGPOST=0.960;BRSQ=0.896;LDAF=0.7386;AVGPOST=0.9129;RSQ=0.8141;ERATE=0.0383;THETA=0.0005;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 27832561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27832736 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27832755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5154;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 27832797 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8374;AVGPOST=0.9981;RSQ=0.9942;ERATE=0.0005;THETA=0.0003;AC=1828;AN=2184 GT:DS:GL:BD 0.83699632 1
1 27832867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9534;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27832919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9804;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27832960 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.3535;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 27832984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7495;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27832990 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27833110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27833133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.899;LDAF=0.1120;AVGPOST=0.9810;RSQ=0.9376;ERATE=0.0005;THETA=0.0003;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 27833304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27833429 . CT C 4938 PASS INDEL;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0492;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 27833566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0488;AVGPOST=0.9985;RSQ=0.9885;ERATE=0.0003;THETA=0.0002;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 27833574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0486;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0003;THETA=0.0011;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27833584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4809;AVGPOST=0.9960;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 27833615 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2972;AVGPOST=0.9964;RSQ=0.9933;ERATE=0.0005;THETA=0.0004;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 27833632 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8866;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27833672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0298;AVGPOST=0.9955;RSQ=0.9386;ERATE=0.0004;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27833784 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27833804 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0475;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0004;THETA=0.0008;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 27833828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8676;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27833861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0485;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27833912 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8539;ERATE=0.0003;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27834048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6396;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27834054 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0162;AVGPOST=0.9996;RSQ=0.9884;ERATE=0.0003;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27834203 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27834305 . A AT 258 PASS INDEL;BAVGPOST=0.997;BRSQ=0.748;LDAF=0.0075;AVGPOST=0.9925;RSQ=0.6052;ERATE=0.0019;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27834382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0294;AVGPOST=0.9979;RSQ=0.9718;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27834404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6141;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27834425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0124;AVGPOST=0.9990;RSQ=0.9730;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27834560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0490;AVGPOST=0.9986;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27834639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0486;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0004;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27834664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5029;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27834673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27834706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0076;AVGPOST=0.9986;RSQ=0.9227;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27834707 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.6935;ERATE=0.0011;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27834724 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7898;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27834864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0134;AVGPOST=0.9987;RSQ=0.9612;ERATE=0.0005;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27834916 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0284;AVGPOST=0.9989;RSQ=0.9838;ERATE=0.0004;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27834966 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.778;LDAF=0.0282;AVGPOST=0.9911;RSQ=0.8794;ERATE=0.0005;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 27835110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0295;AVGPOST=0.9993;RSQ=0.9894;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27835175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27835301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8703;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27835349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.817;LDAF=0.0099;AVGPOST=0.9958;RSQ=0.8506;ERATE=0.0005;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27835379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27835390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27835438 . CAG C 187 PASS INDEL;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7000;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27835494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0752;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 27835496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27835506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5557;AVGPOST=0.9969;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 27835843 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5556;AVGPOST=0.9968;RSQ=0.9956;ERATE=0.0004;THETA=0.0031;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 27835883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4537;AVGPOST=0.9935;RSQ=0.9911;ERATE=0.0004;THETA=0.0023;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 27835899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0049;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27835900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5669;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27835942 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8876;ERATE=0.0004;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27835984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27836045 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27836187 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5372;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27836224 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8912;AVGPOST=0.9979;RSQ=0.9920;ERATE=0.0005;THETA=0.0008;AC=1948;AN=2184 GT:DS:GL:BD 0.89194137 1
1 27836325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.959;LDAF=0.0437;AVGPOST=0.9927;RSQ=0.9455;ERATE=0.0003;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 27836333 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0077;AVGPOST=0.9972;RSQ=0.8534;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27836361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27836465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8924;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0004;THETA=0.0010;AC=1950;AN=2184 GT:DS:GL:BD 0.89285713 1
1 27836472 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27836542 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9100;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27836617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9786;ERATE=0.0003;THETA=0.0016;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27836638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8209;ERATE=0.0005;THETA=0.0073;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27836686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2999;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0004;THETA=0.0009;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 27836719 . G GT 17 PASS INDEL;BAVGPOST=0.997;BRSQ=0.648;LDAF=0.0082;AVGPOST=0.9908;RSQ=0.5785;ERATE=0.0022;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27836720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27836783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0153;AVGPOST=0.9979;RSQ=0.9505;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27836796 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27836906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27836999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4689;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27837048 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0723;AVGPOST=0.9973;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 27837115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27837211 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27837410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0154;AVGPOST=0.9974;RSQ=0.9457;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27837413 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.811;LDAF=0.0053;AVGPOST=0.9966;RSQ=0.7758;ERATE=0.0005;THETA=0.0036;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27837527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5943;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27837563 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27837568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3184;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0002;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 27837634 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27837745 . A AG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27837801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9293;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27837810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9045;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27837878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27837998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27838164 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9681;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27838308 rs111934768 G GA 1686 PASS INDEL;BAVGPOST=0.984;BRSQ=0.842;LDAF=0.0584;AVGPOST=0.9508;RSQ=0.6793;ERATE=0.0068;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 27838356 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5357;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27838456 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0103;AVGPOST=0.9996;RSQ=0.9840;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27838473 . AT A 805 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9083;ERATE=0.0006;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27838481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0798;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0003;THETA=0.0022;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 27838562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7584;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27838786 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27838829 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0017;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27838948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27838980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27838985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27839019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27839105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27839185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0494;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0022;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 27839211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27839225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27839243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27839252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27839317 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1398;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0007;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 27839321 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27839342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27839412 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3473;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0004;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 27839434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27839473 . TA T 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7974;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27839547 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27839572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27839575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27839622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2076;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 27839627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7111;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27839707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1421;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 27839775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6628;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27839792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2067;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 27840122 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1399;AVGPOST=0.9982;RSQ=0.9937;ERATE=0.0006;THETA=0.0002;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 27840269 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27840321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0195;AVGPOST=0.9992;RSQ=0.9804;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27840378 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2299;AVGPOST=0.9956;RSQ=0.9898;ERATE=0.0006;THETA=0.0002;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 27840715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5148;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27840754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6328;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27840816 . A AC 487 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.7736;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27840831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1410;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 27840843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3616;AVGPOST=0.9833;RSQ=0.9732;ERATE=0.0015;THETA=0.0004;AC=789;AN=2184 GT:DS:GL:BD 0.36126372 0
1 27840980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6213;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27841012 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.896;LDAF=0.0816;AVGPOST=0.9922;RSQ=0.9598;ERATE=0.0013;THETA=0.0002;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 27841048 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5893;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27841094 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9736;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27841134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.582;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.6353;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27841377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9555;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27841411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5746;AVGPOST=0.9927;RSQ=0.9878;ERATE=0.0010;THETA=0.0003;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 27841481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9985;RSQ=0.9259;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27841505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.9289;AVGPOST=0.9972;RSQ=0.9810;ERATE=0.0006;THETA=0.0005;AC=2029;AN=2184 GT:DS:GL:BD 0.92902929 1
1 27841511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.840;LDAF=0.0117;AVGPOST=0.9947;RSQ=0.8218;ERATE=0.0008;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27841524 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.9187;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27841581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27841660 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5467;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27841686 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27841713 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0466;AVGPOST=0.9969;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 27841723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5387;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27841795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6999;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27841907 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0167;AVGPOST=0.9980;RSQ=0.9500;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27841968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5359;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27842037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6873;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27842039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3503;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0006;THETA=0.0006;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 27842042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2083;AVGPOST=0.9967;RSQ=0.9922;ERATE=0.0006;THETA=0.0002;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 27842069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9671;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27842198 rs35027324 GA G 5922 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1388;AVGPOST=0.9940;RSQ=0.9803;ERATE=0.0008;THETA=0.0005;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 27842231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3564;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0006;THETA=0.0006;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 27842372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27842380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4148;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27842428 . C CA 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3824;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27842472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8387;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27842595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1404;AVGPOST=0.9975;RSQ=0.9929;ERATE=0.0009;THETA=0.0004;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 27842601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.6911;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27842604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27842659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1007;AVGPOST=0.9969;RSQ=0.9878;ERATE=0.0005;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 27842728 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5706;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27842732 . GA G 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8340;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27842890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2121;AVGPOST=0.9980;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 27843076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0123;AVGPOST=0.9986;RSQ=0.9525;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27843133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6885;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27843155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9401;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27843163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27843327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6802;AVGPOST=0.9942;RSQ=0.9897;ERATE=0.0009;THETA=0.0004;AC=1483;AN=2184 GT:DS:GL:BD 0.67902929 1
1 27843407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9994;RSQ=0.9759;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27843426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7968;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27843439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0160;AVGPOST=0.9987;RSQ=0.9676;ERATE=0.0003;THETA=0.0013;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27843453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27843482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0124;AVGPOST=0.9969;RSQ=0.8974;ERATE=0.0004;THETA=0.0015;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27843611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0172;AVGPOST=0.9988;RSQ=0.9730;ERATE=0.0004;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 27843671 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27843734 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27843830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7792;ERATE=0.0005;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27843837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27843845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27843856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5520;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27843870 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27843922 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0389;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0003;THETA=0.0009;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 27843970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8553;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27843975 . T TG 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.3994;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27844175 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0044;AVGPOST=0.9981;RSQ=0.8513;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27844176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27844268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0010;AVGPOST=0.9984;RSQ=0.3270;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27844390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.932;LDAF=0.0324;AVGPOST=0.9968;RSQ=0.9616;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 27844391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7698;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27844438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9992;RSQ=0.8939;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27844569 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9791;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27844800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27844813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27844902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6885;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27844923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7554;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27845051 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4701;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27845052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27845076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27845168 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5943;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27845217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6726;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=1468;AN=2184 GT:DS:GL:BD 0.67216116 1
1 27845236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6982;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27845242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27845300 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6837;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=1493;AN=2184 GT:DS:GL:BD 0.68360806 1
1 27845317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27845481 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7090;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27845574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27845602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6789;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0006;THETA=0.0003;AC=1482;AN=2184 GT:DS:GL:BD 0.67857140 1
1 27845645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7052;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27845699 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27845865 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6769;AVGPOST=0.9966;RSQ=0.9934;ERATE=0.0007;THETA=0.0003;AC=1480;AN=2184 GT:DS:GL:BD 0.67765570 1
1 27845871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27845907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6786;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=1482;AN=2184 GT:DS:GL:BD 0.67857140 1
1 27846034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9681;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27846119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5379;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27846302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27846309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7386;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27846494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5581;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27846609 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5717;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27846701 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9847;ERATE=0.0004;THETA=0.0017;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27846712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27846729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27846731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.4930;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27846949 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27846968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6827;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0005;THETA=0.0016;AC=1490;AN=2184 GT:DS:GL:BD 0.68223441 1
1 27846971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27847005 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9054;AVGPOST=0.9971;RSQ=0.9865;ERATE=0.0005;THETA=0.0005;AC=1980;AN=2184 GT:DS:GL:BD 0.90659338 1
1 27847210 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5461;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27847240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5262;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27847271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2117;AVGPOST=0.9962;RSQ=0.9912;ERATE=0.0007;THETA=0.0003;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 27847454 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0560;AVGPOST=0.9988;RSQ=0.9901;ERATE=0.0003;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 27847515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4936;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27847516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0075;AVGPOST=0.9983;RSQ=0.9270;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27847661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27847801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4115;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27847886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27847891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9074;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27847899 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6791;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27847924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9003;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27847948 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6827;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0007;THETA=0.0004;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 27848168 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7055;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27848276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0078;AVGPOST=0.9982;RSQ=0.9234;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27848376 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9682;AVGPOST=0.9987;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 27848391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27848499 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0064;AVGPOST=0.9958;RSQ=0.7860;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27848743 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0073;AVGPOST=0.9978;RSQ=0.8748;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27848782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9326;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27849034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27849090 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27849128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5303;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27849135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1811;AVGPOST=0.9972;RSQ=0.9923;ERATE=0.0007;THETA=0.0003;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 27849166 . AG A 597 PASS INDEL;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0113;AVGPOST=0.9979;RSQ=0.9277;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27849169 rs57176220 AT A 152 PASS INDEL;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0063;AVGPOST=0.9955;RSQ=0.7128;ERATE=0.0008;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27849200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.0556;ERATE=0.0005;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27849226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1677;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0004;THETA=0.0005;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 27849365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9609;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27849374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5847;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27849440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27849583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5728;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27849612 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27849761 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27849792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8717;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27849854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6145;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27849879 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0058;AVGPOST=0.9974;RSQ=0.8247;ERATE=0.0005;THETA=0.0038;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27850010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3438;ERATE=0.0005;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27850031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8217;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27850038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1894;AVGPOST=0.9928;RSQ=0.9821;ERATE=0.0007;THETA=0.0003;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 27850145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.961;LDAF=0.4997;AVGPOST=0.9914;RSQ=0.9861;ERATE=0.0007;THETA=0.0006;AC=1097;AN=2184 GT:DS:GL:BD 0.50228935 1
1 27850188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27850300 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5155;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27850323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27850394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27850504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6376;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27850523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27850544 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6694;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27850550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0889;AVGPOST=0.9983;RSQ=0.9914;ERATE=0.0004;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 27850568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27850586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.4678;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27850650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.944;LDAF=0.2566;AVGPOST=0.9930;RSQ=0.9856;ERATE=0.0007;THETA=0.0004;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 27850720 . GT G 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7079;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27850787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0039;AVGPOST=0.9983;RSQ=0.8119;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27850827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6149;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27850854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0239;AVGPOST=0.9985;RSQ=0.9735;ERATE=0.0003;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27850878 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8074;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27851076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27851102 . GTAGGATGACTTCC G 1729 PASS INDEL;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0107;AVGPOST=0.9950;RSQ=0.8219;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27851187 . TG T 1586 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0074;AVGPOST=0.9986;RSQ=0.9166;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27851227 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8517;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27851230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9068;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27851291 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27851509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0164;AVGPOST=0.9995;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27851612 . C CT 467 PASS INDEL;BAVGPOST=0.942;BRSQ=0.535;LDAF=0.1050;AVGPOST=0.8867;RSQ=0.4875;ERATE=0.0382;THETA=0.0004;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 27851648 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8249;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27851797 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0086;AVGPOST=0.9971;RSQ=0.8829;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27851919 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8801;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27852099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27852278 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7828;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27852382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9975;RSQ=0.9450;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27852416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27852480 . CAT C 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6892;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27852500 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8761;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27852563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0076;AVGPOST=0.9987;RSQ=0.9331;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27852740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27852756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5533;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27852781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27853147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9407;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27853324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0032;AVGPOST=0.9958;RSQ=0.4870;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27853351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8834;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27853352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.909;LDAF=0.2560;AVGPOST=0.9797;RSQ=0.9644;ERATE=0.0008;THETA=0.0004;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 27853486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0141;AVGPOST=0.9845;RSQ=0.5856;ERATE=0.0013;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27853589 rs60624527 T TA 26497 PASS INDEL;BAVGPOST=0.983;BRSQ=0.971;LDAF=0.3539;AVGPOST=0.9888;RSQ=0.9843;ERATE=0.0009;THETA=0.0002;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 27853723 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.677;LDAF=0.0044;AVGPOST=0.9971;RSQ=0.7273;ERATE=0.0013;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27853734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0128;AVGPOST=0.9991;RSQ=0.9716;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27853860 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0501;AVGPOST=0.9952;RSQ=0.9693;ERATE=0.0002;THETA=0.0007;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 27853890 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27854081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9081;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27854102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0692;AVGPOST=0.9987;RSQ=0.9946;ERATE=0.0002;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 27854133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8545;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27854169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27854196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6911;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27854231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27854297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0002;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27854359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0094;AVGPOST=0.9968;RSQ=0.8615;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27854492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0099;AVGPOST=0.9985;RSQ=0.9457;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27854499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0153;AVGPOST=0.9959;RSQ=0.9031;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27854500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27854755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7403;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27854845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3335;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 27854912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27854970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0046;AVGPOST=0.9959;RSQ=0.6686;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27855067 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9233;AVGPOST=0.9991;RSQ=0.9953;ERATE=0.0002;THETA=0.0002;AC=2017;AN=2184 GT:DS:GL:BD 0.92353481 1
1 27855159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3338;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0005;THETA=0.0004;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 27855193 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0254;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 27855201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27855325 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27855343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5432;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27855352 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5241;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27855606 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5513;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27855620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6508;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27855670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27855760 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8930;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27855782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27855860 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7493;ERATE=0.0003;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27855885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8156;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27856248 . G GA 217 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5033;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27856264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0238;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0002;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 27856431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8916;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27856531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27856707 . AT A 113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27856931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5615;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27856943 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2161;AVGPOST=0.9961;RSQ=0.9911;ERATE=0.0005;THETA=0.0003;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 27857438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6385;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27857572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4969;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27857597 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2166;AVGPOST=0.9969;RSQ=0.9927;ERATE=0.0006;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 27857599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27857634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.4766;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27857635 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3187;AVGPOST=0.9942;RSQ=0.9908;ERATE=0.0009;THETA=0.0003;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 27857718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1253;AVGPOST=0.9925;RSQ=0.9769;ERATE=0.0003;THETA=0.0010;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 27857800 rs71681341 CATTT C 10181 PASS INDEL;BAVGPOST=0.991;BRSQ=0.952;LDAF=0.0712;AVGPOST=0.9882;RSQ=0.9452;ERATE=0.0008;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 27858003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.327;LDAF=0.0034;AVGPOST=0.9944;RSQ=0.3824;ERATE=0.0009;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27858027 . ATAAT A 292 PASS INDEL;BAVGPOST=0.997;BRSQ=0.617;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7137;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27858029 . GTGTC G 330 PASS INDEL;BAVGPOST=0.997;BRSQ=0.525;LDAF=0.0060;AVGPOST=0.9934;RSQ=0.5807;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27858298 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4321;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27858410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8192;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27858435 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27858452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6248;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27858631 . TA T 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6245;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27858639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9911;AVGPOST=0.9988;RSQ=0.9522;ERATE=0.0003;THETA=0.0003;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 27858705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9910;AVGPOST=0.9985;RSQ=0.9421;ERATE=0.0004;THETA=0.0009;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 27858793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4944;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27858949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9499;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27859044 . A AT 57 PASS INDEL;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7599;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27859067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1096;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0003;THETA=0.0012;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 27859210 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27859222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6284;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27859258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7845;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27859264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6857;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0005;THETA=0.0006;AC=1499;AN=2184 GT:DS:GL:BD 0.68635529 1
1 27859299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5926;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27859308 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7825;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27859313 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9653;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27859316 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9916;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0002;THETA=0.0006;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 27859351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7343;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27859455 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0111;AVGPOST=0.9985;RSQ=0.9410;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27859506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5580;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27859677 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8636;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27859723 rs59175778 ACT A 43741 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2964;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0005;THETA=0.0007;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 27859862 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5582;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27859926 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9916;AVGPOST=0.9997;RSQ=0.9817;ERATE=0.0003;THETA=0.0007;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 27859996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0178;AVGPOST=0.9979;RSQ=0.9589;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27859999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6860;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0010;AC=1499;AN=2184 GT:DS:GL:BD 0.68635529 1
1 27860053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5362;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27860096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1137;AVGPOST=0.9977;RSQ=0.9909;ERATE=0.0005;THETA=0.0007;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 27860157 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9596;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27860176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9912;AVGPOST=0.9989;RSQ=0.9565;ERATE=0.0003;THETA=0.0007;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 27860267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6497;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27860358 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8191;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27860495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27860512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4979;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27860558 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0372;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0002;THETA=0.0013;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 27860683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5801;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27860761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7357;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27860783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9261;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27861346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27861351 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0043;AVGPOST=0.9977;RSQ=0.7961;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27861570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9910;AVGPOST=0.9994;RSQ=0.9723;ERATE=0.0003;THETA=0.0005;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 27861589 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27861596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27861663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0002;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27861685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27861708 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8135;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27861969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7320;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27861991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27861992 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4827;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27862000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5874;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27862203 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0100;AVGPOST=0.9991;RSQ=0.9562;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27862253 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0166;AVGPOST=0.9977;RSQ=0.9522;ERATE=0.0005;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27862256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27862274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2488;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 27862358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1202;AVGPOST=0.9992;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 27862398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0002;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27862456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7267;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27862640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27862649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0165;AVGPOST=0.9984;RSQ=0.9678;ERATE=0.0004;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27862652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6854;AVGPOST=0.9950;RSQ=0.9920;ERATE=0.0009;THETA=0.0004;AC=1501;AN=2184 GT:DS:GL:BD 0.68727106 1
1 27862678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.354;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4086;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27862732 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4604;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27862838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9610;ERATE=0.0002;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27862847 . CAAAT C 233 PASS INDEL;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.6424;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27862917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2486;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0002;THETA=0.0004;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 27863005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2966;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0008;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 27863092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1218;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 27863128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9656;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27863131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6322;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27863151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27863193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9675;ERATE=0.0002;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27863298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7575;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27863405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1097;AVGPOST=0.9980;RSQ=0.9924;ERATE=0.0004;THETA=0.0009;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 27863468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27863478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27863561 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1090;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0002;THETA=0.0009;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 27863571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6911;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27863606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0144;AVGPOST=0.9992;RSQ=0.9752;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27863760 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0714;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0025;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 27863783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.706;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27863812 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27864017 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0092;AVGPOST=0.9992;RSQ=0.9637;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27864088 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.865;LDAF=0.0287;AVGPOST=0.9954;RSQ=0.9282;ERATE=0.0005;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 27864251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27864274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.5032;AVGPOST=0.9863;RSQ=0.9798;ERATE=0.0029;THETA=0.0005;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 27864351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6007;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27864609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8608;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27864899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5809;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27864945 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27865025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0712;AVGPOST=0.9986;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27865032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0278;AVGPOST=0.9990;RSQ=0.9834;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27865057 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27865144 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9581;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27865196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9713;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27865229 . A AT 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0040;AVGPOST=0.9951;RSQ=0.4748;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27865263 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27865389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27865485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27865520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27865523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27865540 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5777;AVGPOST=0.9969;RSQ=0.9954;ERATE=0.0004;THETA=0.0005;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 27865649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27865660 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9690;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27865669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5784;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0018;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 27865721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8707;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27865791 . AAAC A 43 PASS INDEL;BAVGPOST=0.994;BRSQ=0.705;LDAF=0.0177;AVGPOST=0.9788;RSQ=0.5335;ERATE=0.0047;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27865807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6728;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27865842 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0672;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0002;THETA=0.0006;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 27865871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27865891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7767;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27865897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0709;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0005;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27865969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0710;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27866073 . TATTA T 84 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7683;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27866089 MERGED_DEL_2_3986 A ADELA . . SV;BAVGPOST=0.999;BRSQ=0.389;LDAF=0.0142;AVGPOST=0.9814;RSQ=0.4995;ERATE=0.0032;THETA=0.0006;CIEND=-17;33;CIPOS=-18;19;END=73976796;SOURCE=GenomeStrip_73976148_73976796;SVTYPE=DEL;AC=18;AN=2 GT:DS:GL:BD 0.00824176 0
1 27866111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0711;AVGPOST=0.9991;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27866451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4412;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27866456 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8972;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27866473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0050;AVGPOST=0.9974;RSQ=0.8047;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27866517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0672;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 27866632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0199;AVGPOST=0.9985;RSQ=0.9782;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 27866660 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0708;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27866693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0709;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27866728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27866826 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7727;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27866933 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0710;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27866989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5077;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=1108;AN=2184 GT:DS:GL:BD 0.50732601 1
1 27867070 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8567;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27867140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0706;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0002;THETA=0.0006;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27867146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7935;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27867239 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27867283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0710;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0002;THETA=0.0008;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27867291 . AG A 415 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27867320 rs58026246 T TG 10044 PASS INDEL;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0722;AVGPOST=0.9960;RSQ=0.9789;ERATE=0.0005;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 27867385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27867521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6340;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27867543 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8742;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27867647 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4672;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27867678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27867706 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0711;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27867725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27867848 . CTA C 800 PASS INDEL;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0083;AVGPOST=0.9984;RSQ=0.9167;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27867855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27867882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4872;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27867916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9720;ERATE=0.0002;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27867966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8738;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27868101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9068;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27868157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9198;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27868355 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27868373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0716;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 27868421 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0668;AVGPOST=0.9989;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 27868450 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27868479 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0709;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0008;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27868509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.0629;AVGPOST=0.9958;RSQ=0.9737;ERATE=0.0003;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 27868534 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.0628;AVGPOST=0.9962;RSQ=0.9763;ERATE=0.0003;THETA=0.0006;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 27868535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.8953;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27868570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9406;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27868596 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0686;AVGPOST=0.9980;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 27868748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8075;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27868749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9033;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27868750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0664;AVGPOST=0.9968;RSQ=0.9829;ERATE=0.0005;THETA=0.0007;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 27868759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27869034 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6782;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27869053 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9594;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27869317 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0185;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 27869399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5504;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27869588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7612;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27869694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.6375;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27869719 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7202;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27869925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9041;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27869969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.3531;AVGPOST=0.9937;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 27869974 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0003;THETA=0.0012;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27870222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27870407 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0092;AVGPOST=0.9972;RSQ=0.8931;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27870426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9747;ERATE=0.0003;THETA=0.0024;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27870482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7781;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27870530 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27870689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27870728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27870767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27870779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.4611;AVGPOST=0.9898;RSQ=0.9850;ERATE=0.0013;THETA=0.0066;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 27871005 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9808;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27871207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9164;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27871264 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27871272 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6384;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27871297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9822;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 27871517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9822;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 27871546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27871610 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27871741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27871825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27871842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27871987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872249 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27872270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0003;THETA=0.0050;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27872291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27872300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27872442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27872465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27872490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27872491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3877;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0027;THETA=0.0007;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 27872579 rs76571187 CCCT C 14848 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1297;AVGPOST=0.9920;RSQ=0.9743;ERATE=0.0007;THETA=0.0037;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 27872591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27872597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27872689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872825 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872832 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3885;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 27872962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27872986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873045 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27873052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873059 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27873101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27873208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27873292 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27873302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0135;AVGPOST=0.9989;RSQ=0.9670;ERATE=0.0048;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27873337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27873358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9390;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27873382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27873481 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873535 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873567 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0045;AVGPOST=0.9997;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27873570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9554;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27873614 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0003;THETA=0.0012;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27873697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9872;ERATE=0.0003;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27873698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27873718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873766 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27873825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27873852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27873953 . TAC T 104 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0050;AVGPOST=0.9951;RSQ=0.6146;ERATE=0.0011;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27873994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27874000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9707;ERATE=0.0002;THETA=0.0051;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27874132 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9065;ERATE=0.0002;THETA=0.0040;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27874159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0259;AVGPOST=0.9986;RSQ=0.9771;ERATE=0.0004;THETA=0.0069;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27874231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0122;AVGPOST=0.9976;RSQ=0.9332;ERATE=0.0003;THETA=0.0065;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27874321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3601;AVGPOST=0.9864;RSQ=0.9835;ERATE=0.0006;THETA=0.0003;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 27874367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0122;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27874488 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6798;ERATE=0.0004;THETA=0.0169;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27874669 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0002;THETA=0.0221;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27874681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8762;ERATE=0.0003;THETA=0.0084;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27874698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0345;AVGPOST=0.9921;RSQ=0.9252;ERATE=0.0021;THETA=0.0037;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 27874771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9423;ERATE=0.0003;THETA=0.0038;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27874806 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.959;LDAF=0.0598;AVGPOST=0.9941;RSQ=0.9633;ERATE=0.0005;THETA=0.0091;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 27874866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0091;AVGPOST=0.9977;RSQ=0.8985;ERATE=0.0003;THETA=0.0041;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27874892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0143;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27874903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0250;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27875028 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27875034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0147;AVGPOST=0.9989;RSQ=0.9748;ERATE=0.0003;THETA=0.0111;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27875044 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9092;ERATE=0.0004;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27875254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0002;THETA=0.0181;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27875285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0310;AVGPOST=0.9989;RSQ=0.9849;ERATE=0.0005;THETA=0.0041;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 27875290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9544;ERATE=0.0004;THETA=0.0038;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27875550 rs34492402 AG A 22874 PASS INDEL;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.1838;AVGPOST=0.9825;RSQ=0.9605;ERATE=0.0005;THETA=0.0036;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 27875575 . GT G 1307 PASS INDEL;BAVGPOST=0.942;BRSQ=0.817;LDAF=0.1695;AVGPOST=0.9628;RSQ=0.9135;ERATE=0.0010;THETA=0.0015;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 27875578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8731;ERATE=0.0002;THETA=0.0068;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27875604 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.8102;ERATE=0.0003;THETA=0.0058;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27875618 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8376;ERATE=0.0003;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27875625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27875883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0020;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27875936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27875957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0312;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0017;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 27875972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8038;AVGPOST=0.9972;RSQ=0.9932;ERATE=0.0002;THETA=0.0022;AC=1755;AN=2184 GT:DS:GL:BD 0.80357140 1
1 27875977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0332;AVGPOST=0.9990;RSQ=0.9868;ERATE=0.0002;THETA=0.0008;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 27876013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8028;AVGPOST=0.9955;RSQ=0.9890;ERATE=0.0006;THETA=0.0008;AC=1755;AN=2184 GT:DS:GL:BD 0.80357140 1
1 27876014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5541;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27876110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4812;AVGPOST=0.9957;RSQ=0.9945;ERATE=0.0006;THETA=0.0024;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 27876137 rs34789492 A AT 1562 PASS INDEL;BAVGPOST=0.525;BRSQ=0.180;LDAF=0.4679;AVGPOST=0.6709;RSQ=0.4290;ERATE=0.0234;THETA=0.0005;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 27876157 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.5969;AVGPOST=0.9941;RSQ=0.9910;ERATE=0.0008;THETA=0.0006;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 27876224 . CG C 75 PASS INDEL;BAVGPOST=0.997;BRSQ=0.674;LDAF=0.0111;AVGPOST=0.9864;RSQ=0.4801;ERATE=0.0041;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27876257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=0.9990;RSQ=0.9773;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27876312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0703;AVGPOST=0.9981;RSQ=0.9896;ERATE=0.0004;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27876329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0025;AVGPOST=0.9957;RSQ=0.3012;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27876378 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4386;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27876413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0705;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27876448 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0091;AVGPOST=0.9979;RSQ=0.9099;ERATE=0.0005;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27876464 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8899;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27876527 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27876616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27876635 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5794;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27876772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27876877 rs67388432 TA T 52450 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8024;AVGPOST=0.9951;RSQ=0.9873;ERATE=0.0008;THETA=0.0006;AC=1755;AN=2184 GT:DS:GL:BD 0.80357140 1
1 27876955 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8224;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27876983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8809;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27876990 . T TG 57 PASS INDEL;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.5882;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27877016 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7822;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27877182 . T TG 10236 PASS INDEL;BAVGPOST=0.904;BRSQ=0.833;LDAF=0.4892;AVGPOST=0.8725;RSQ=0.8278;ERATE=0.0247;THETA=0.0004;AC=1098;AN=2184 GT:DS:GL:BD 0.50274724 1
1 27877223 rs67594709 G GT 57625 PASS INDEL;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5937;AVGPOST=0.9961;RSQ=0.9942;ERATE=0.0006;THETA=0.0005;AC=1297;AN=2184 GT:DS:GL:BD 0.59386444 1
1 27877224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27877257 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0002;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27877259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9486;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27877300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7213;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27877365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5229;AVGPOST=0.9985;RSQ=0.9981;ERATE=0.0004;THETA=0.0018;AC=1141;AN=2184 GT:DS:GL:BD 0.52243590 1
1 27877413 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27877419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6584;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27877437 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4814;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27877464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27877535 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4741;AVGPOST=0.9964;RSQ=0.9959;ERATE=0.0004;THETA=0.0035;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 27877564 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6947;ERATE=0.0003;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27877607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1974;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 27877676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.954;LDAF=0.1599;AVGPOST=0.9904;RSQ=0.9736;ERATE=0.0008;THETA=0.0027;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 27877822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27877888 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0342;AVGPOST=0.9991;RSQ=0.9878;ERATE=0.0003;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 27878083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0341;AVGPOST=0.9987;RSQ=0.9821;ERATE=0.0003;THETA=0.0037;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 27878104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.976;LDAF=0.1465;AVGPOST=0.9901;RSQ=0.9700;ERATE=0.0006;THETA=0.0006;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 27878202 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0343;AVGPOST=0.9990;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 27878477 . C CA 13244 PASS INDEL;BAVGPOST=0.988;BRSQ=0.963;LDAF=0.1874;AVGPOST=0.9899;RSQ=0.9751;ERATE=0.0011;THETA=0.0004;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 27878566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.966;LDAF=0.2940;AVGPOST=0.9822;RSQ=0.9710;ERATE=0.0004;THETA=0.0003;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 27878572 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3374;AVGPOST=0.9838;RSQ=0.9747;ERATE=0.0008;THETA=0.0005;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 27878676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8344;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27878729 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.961;LDAF=0.5821;AVGPOST=0.9660;RSQ=0.9565;ERATE=0.0053;THETA=0.0013;AC=1286;AN=2184 GT:DS:GL:BD 0.58882785 1
1 27878764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.675;LDAF=0.0145;AVGPOST=0.9910;RSQ=0.7683;ERATE=0.0005;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27878823 . GCCT G 515 PASS INDEL;BAVGPOST=0.983;BRSQ=0.574;LDAF=0.0307;AVGPOST=0.9684;RSQ=0.6066;ERATE=0.0046;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 27878847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.740;LDAF=0.0111;AVGPOST=0.9889;RSQ=0.6226;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27878929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0057;AVGPOST=0.9942;RSQ=0.6355;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27878948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.958;LDAF=0.3268;AVGPOST=0.9836;RSQ=0.9732;ERATE=0.0011;THETA=0.0005;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 27878961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0121;AVGPOST=0.9978;RSQ=0.9342;ERATE=0.0004;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27879002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27879075 . A AT 341 PASS INDEL;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0061;AVGPOST=0.9957;RSQ=0.7113;ERATE=0.0013;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27879145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5764;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 27879178 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27879211 . C CT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27879340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27879345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7803;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27879453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6860;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27879591 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27879592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27879624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27879673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7657;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27879782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5858;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27879789 . AACTT A 134 PASS INDEL;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6541;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27879796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9284;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27879866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9635;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27879914 . TAC T 1428 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0088;AVGPOST=0.9991;RSQ=0.9568;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27879916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27879959 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27879974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27880027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0064;AVGPOST=0.9985;RSQ=0.9219;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27880092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5771;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27880315 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9080;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27880444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8276;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27880483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0063;AVGPOST=0.9996;RSQ=0.9756;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27880487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6098;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27880523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0233;AVGPOST=0.9991;RSQ=0.9835;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27880539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5725;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27880611 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27880616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0445;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 27880622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5757;AVGPOST=0.9949;RSQ=0.9921;ERATE=0.0007;THETA=0.0002;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 27880692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7644;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27880741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27880782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27880861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0066;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27880921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27881117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8592;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27881172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0468;AVGPOST=0.9985;RSQ=0.9852;ERATE=0.0007;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 27881212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27881223 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27881230 rs113866002 T TA 18885 PASS INDEL;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.3241;AVGPOST=0.9854;RSQ=0.9741;ERATE=0.0029;THETA=0.0007;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 27881318 . A AAG 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.503;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4244;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27881320 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3303;AVGPOST=0.9877;RSQ=0.9778;ERATE=0.0019;THETA=0.0005;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 27881347 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0577;AVGPOST=0.9992;RSQ=0.9938;ERATE=0.0004;THETA=0.0007;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 27881377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0489;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27881460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7458;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27881479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0489;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27881481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5119;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 27881503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27881514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0494;AVGPOST=0.9987;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 27881562 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.9112;AVGPOST=0.9975;RSQ=0.9878;ERATE=0.0004;THETA=0.0005;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 27881574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5168;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0006;THETA=0.0005;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 27881597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0490;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0003;THETA=0.0023;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27881619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0121;AVGPOST=0.9994;RSQ=0.9763;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27881710 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27881835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4646;ERATE=0.0005;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27881848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2465;AVGPOST=0.9976;RSQ=0.9943;ERATE=0.0005;THETA=0.0005;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 27881889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9804;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27881974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0452;AVGPOST=0.9959;RSQ=0.9658;ERATE=0.0004;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 27881982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0449;AVGPOST=0.9960;RSQ=0.9669;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 27881983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27882014 . AG A 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3574;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27882031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7854;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27882059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.401;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27882132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8230;ERATE=0.0005;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27882142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.889;LDAF=0.0295;AVGPOST=0.9915;RSQ=0.8792;ERATE=0.0008;THETA=0.0020;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 27882167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8750;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27882359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0450;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0003;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 27882448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6694;ERATE=0.0010;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27882461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0492;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0004;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27882608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27882615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9483;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27882753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27882770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0580;AVGPOST=0.9986;RSQ=0.9911;ERATE=0.0003;THETA=0.0007;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 27882893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0489;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27882894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7903;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27883206 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0490;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27883245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0492;AVGPOST=0.9993;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 27883306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27883345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0469;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 27883396 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5582;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27883397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27883427 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6145;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27883555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27883603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9257;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27883621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9245;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=2020;AN=2184 GT:DS:GL:BD 0.92490840 1
1 27883622 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9614;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27883631 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27883765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27883823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9008;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27883944 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4951;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27884992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4593;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27884995 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4215;AVGPOST=0.9923;RSQ=0.9889;ERATE=0.0012;THETA=0.0006;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 27885133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.5972;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27885278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27885312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27885548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0044;AVGPOST=0.9974;RSQ=0.7734;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27885563 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.514;LDAF=0.0030;AVGPOST=0.9946;RSQ=0.2870;ERATE=0.0009;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27885626 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4936;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27885661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7530;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27885763 . CTG C 273 PASS INDEL;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0039;AVGPOST=0.9962;RSQ=0.6049;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27885771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27885823 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9624;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27885908 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27885938 . CA C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5084;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27886233 . GA G 41 PASS INDEL;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0031;AVGPOST=0.9962;RSQ=0.5126;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27886333 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5842;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27886361 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4198;AVGPOST=0.9948;RSQ=0.9923;ERATE=0.0008;THETA=0.0008;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 27886874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5871;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27887134 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6125;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27887254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0030;AVGPOST=0.9957;RSQ=0.4661;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27887256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27887282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27887347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3294;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27887409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27887469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5719;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27887544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4209;AVGPOST=0.9937;RSQ=0.9913;ERATE=0.0010;THETA=0.0005;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 27887622 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0086;AVGPOST=0.9984;RSQ=0.9353;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27887673 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0110;AVGPOST=0.9952;RSQ=0.8500;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27887800 . C CT 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6288;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27887837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9420;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27887877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27888039 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27888109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9052;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27888555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8434;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27888578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0297;AVGPOST=0.9986;RSQ=0.9807;ERATE=0.0003;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27888901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27888917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27888987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6292;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27889214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0062;AVGPOST=0.9970;RSQ=0.8291;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27889235 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9749;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27889415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6332;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27889426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7320;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27889612 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27889613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8649;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27889618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5981;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27889747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5405;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27889849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27890095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2670;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 27890257 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6560;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27890293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27890409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.9954;AVGPOST=0.9994;RSQ=0.9435;ERATE=0.0003;THETA=0.0004;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 27890532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4718;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27890591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9242;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27890726 . A AT 213 PASS INDEL;BAVGPOST=0.998;BRSQ=0.607;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5777;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27890766 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.8827;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27890904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27891057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8033;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27891167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9980;RSQ=0.9320;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27891168 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4628;AVGPOST=0.9966;RSQ=0.9945;ERATE=0.0009;THETA=0.0004;AC=1009;AN=2184 GT:DS:GL:BD 0.46199635 0
1 27891169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1899;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 27891427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0099;AVGPOST=0.9978;RSQ=0.9162;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27891442 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8363;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27891447 . G GT 956 PASS INDEL;BAVGPOST=0.996;BRSQ=0.878;LDAF=0.0210;AVGPOST=0.9897;RSQ=0.8267;ERATE=0.0011;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27891482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5768;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27891759 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9369;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27891816 . CCTT C 196 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27891880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9404;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27891917 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27891969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27892032 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6531;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0002;AC=1426;AN=2184 GT:DS:GL:BD 0.65293038 1
1 27892251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.9984;AVGPOST=0.9995;RSQ=0.8913;ERATE=0.0003;THETA=0.0002;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 27892396 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27892463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9832;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27892475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7204;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27892542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6918;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27892555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5037;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27892632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8343;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27892646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27892652 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4652;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1015;AN=2184 GT:DS:GL:BD 0.46474358 0
1 27892677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7358;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27892699 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27892774 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27892818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9605;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27892864 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6791;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27892895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9335;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27892940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27893004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27893153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27893173 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0255;AVGPOST=0.9993;RSQ=0.9896;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 27893184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2680;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0005;THETA=0.0004;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 27893307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4691;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 27893423 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6353;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27893435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0124;AVGPOST=0.9990;RSQ=0.9671;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27893608 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1026;AVGPOST=0.9982;RSQ=0.9927;ERATE=0.0003;THETA=0.0002;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 27893639 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27893678 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27893683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.840;LDAF=0.9918;AVGPOST=0.9939;RSQ=0.7063;ERATE=0.0013;THETA=0.0003;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 27893885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7363;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=1608;AN=2184 GT:DS:GL:BD 0.73626375 1
1 27894000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27894116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27894170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9263;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27894179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3501;AVGPOST=0.9970;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 27894187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27894273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0084;AVGPOST=0.9981;RSQ=0.9078;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27894297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6239;AVGPOST=0.9972;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=1363;AN=2184 GT:DS:GL:BD 0.62408423 1
1 27894375 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27894392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9590;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27894511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27894535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7948;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27894669 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8310;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27894672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27894700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0181;AVGPOST=0.9993;RSQ=0.9837;ERATE=0.0004;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27894808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0062;AVGPOST=0.9956;RSQ=0.7298;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27894906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1243;AVGPOST=0.9941;RSQ=0.9834;ERATE=0.0008;THETA=0.0007;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 27894972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.0715;AVGPOST=0.9968;RSQ=0.9819;ERATE=0.0004;THETA=0.0002;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27894984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0213;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0003;THETA=0.0019;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27894988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6176;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27894998 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3199;AVGPOST=0.9953;RSQ=0.9919;ERATE=0.0005;THETA=0.0004;AC=699;AN=2184 GT:DS:GL:BD 0.32005495 0
1 27895077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27895108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9646;ERATE=0.0003;THETA=0.0019;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27895135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0437;AVGPOST=0.9989;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 27895175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9651;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27895206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2384;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0005;THETA=0.0007;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 27895233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6644;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27895280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9056;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27895345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8316;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27895378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9000;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27895409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6603;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27895444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7939;ERATE=0.0003;THETA=0.0050;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27895485 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0228;AVGPOST=0.9992;RSQ=0.9869;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27895986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9321;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27895992 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27896052 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.9006;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27896082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0113;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27896091 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.4120;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27896105 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5558;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27896143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27896477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6661;ERATE=0.0002;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27896561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8553;ERATE=0.0002;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27896620 . CCT C 130 PASS INDEL;BAVGPOST=0.988;BRSQ=0.647;LDAF=0.0265;AVGPOST=0.9712;RSQ=0.5549;ERATE=0.0097;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27896627 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.978;LDAF=0.3309;AVGPOST=0.9844;RSQ=0.9776;ERATE=0.0016;THETA=0.0006;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 27896682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9160;ERATE=0.0004;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27896735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0037;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27896744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2526;AVGPOST=0.9927;RSQ=0.9869;ERATE=0.0003;THETA=0.0014;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 27896939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27896967 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7689;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27896992 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0127;AVGPOST=0.9992;RSQ=0.9764;ERATE=0.0003;THETA=0.0052;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27897068 . AAAT A 253 PASS INDEL;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5964;ERATE=0.0005;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27897068 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.988;LDAF=0.5347;AVGPOST=0.9875;RSQ=0.9837;ERATE=0.0003;THETA=0.0040;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 27897075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6813;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27897109 . T TTATTAC 12383 PASS INDEL;BAVGPOST=0.932;BRSQ=0.731;LDAF=0.1507;AVGPOST=0.9166;RSQ=0.7467;ERATE=0.0166;THETA=0.0066;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 27897145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9464;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27897175 . TACAA T 259 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7078;ERATE=0.0004;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27897179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4178;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27897201 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6638;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27897320 . A AACT 646 PASS INDEL;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0071;AVGPOST=0.9977;RSQ=0.8593;ERATE=0.0004;THETA=0.0034;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27897336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27897342 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0454;AVGPOST=0.9955;RSQ=0.9643;ERATE=0.0003;THETA=0.0085;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 27897458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9991;RSQ=0.9458;ERATE=0.0002;THETA=0.0046;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27897492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7209;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27897493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5509;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27897576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.981;LDAF=0.5168;AVGPOST=0.9820;RSQ=0.9756;ERATE=0.0008;THETA=0.0097;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 27897589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8388;ERATE=0.0002;THETA=0.0108;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27897748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0165;AVGPOST=0.9974;RSQ=0.9389;ERATE=0.0004;THETA=0.0205;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27897763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0094;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27897803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.934;LDAF=0.1280;AVGPOST=0.9771;RSQ=0.9299;ERATE=0.0055;THETA=0.0082;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 27897838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7406;ERATE=0.0003;THETA=0.0076;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27897941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0154;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27897956 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.757;LDAF=0.0077;AVGPOST=0.9966;RSQ=0.8510;ERATE=0.0004;THETA=0.0099;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27897968 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5682;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27897974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9247;ERATE=0.0002;THETA=0.0106;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27897999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0138;AVGPOST=0.9978;RSQ=0.9411;ERATE=0.0003;THETA=0.0264;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27898029 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8696;ERATE=0.0004;THETA=0.0117;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27898207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8481;ERATE=0.0004;THETA=0.0106;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27898230 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.965;LDAF=0.2104;AVGPOST=0.9756;RSQ=0.9499;ERATE=0.0014;THETA=0.0045;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 27898250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8103;ERATE=0.0004;THETA=0.0098;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27898255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27898288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0104;AVGPOST=0.9959;RSQ=0.8621;ERATE=0.0003;THETA=0.0083;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27898303 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5899;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27898383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7617;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27898491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6654;ERATE=0.0004;THETA=0.0155;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27898540 . GCC G 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6112;ERATE=0.0003;THETA=0.0098;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27898582 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7578;ERATE=0.0003;THETA=0.0063;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27898631 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.9746;AVGPOST=0.9976;RSQ=0.9663;ERATE=0.0004;THETA=0.0054;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 27898664 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27898748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3936;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27898848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8666;ERATE=0.0003;THETA=0.0101;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27898932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27899025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0062;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27899046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27899066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5252;ERATE=0.0004;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27899292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27899327 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.8228;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27899409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0291;AVGPOST=0.9981;RSQ=0.9764;ERATE=0.0003;THETA=0.0031;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 27899514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6567;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27899638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8162;ERATE=0.0003;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27899653 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27899809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27899886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27899940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5499;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27899944 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5936;AVGPOST=0.9964;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 27900032 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6831;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27900054 . CA C 7165 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0971;AVGPOST=0.9991;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 27900082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9005;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27900134 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6691;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27900151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1819;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 27900174 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27900263 . AC A 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4508;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27900323 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3480;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 27900338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27900409 . AT A 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7011;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27900415 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1822;AVGPOST=0.9988;RSQ=0.9965;ERATE=0.0005;THETA=0.0009;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 27900485 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27900508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0971;AVGPOST=0.9988;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 27900598 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0967;AVGPOST=0.9993;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 27900634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0177;AVGPOST=0.9987;RSQ=0.9696;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27900641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27900676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3481;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0008;THETA=0.0003;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 27900703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.5948;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27900721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8838;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27900767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0969;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 27900782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0465;AVGPOST=0.9991;RSQ=0.9911;ERATE=0.0003;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 27900824 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5686;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27900834 . TCG T 1748 PASS INDEL;BAVGPOST=0.969;BRSQ=0.879;LDAF=0.1240;AVGPOST=0.9904;RSQ=0.9648;ERATE=0.0014;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 27900899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1818;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 27900975 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3482;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 27900997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7362;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27901013 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27901144 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5722;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27901181 . AC A 401 PASS INDEL;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8527;ERATE=0.0005;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27901204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27901224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0064;AVGPOST=0.9985;RSQ=0.9028;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27901230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5687;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 27901269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9048;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27901283 . GTCTT G 9685 PASS INDEL;BAVGPOST=0.983;BRSQ=0.945;LDAF=0.1688;AVGPOST=0.9940;RSQ=0.9832;ERATE=0.0011;THETA=0.0005;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 27901301 . TCTTA T 23316 PASS INDEL;BAVGPOST=0.988;BRSQ=0.963;LDAF=0.1753;AVGPOST=0.9977;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 27901302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3473;AVGPOST=0.9976;RSQ=0.9965;ERATE=0.0005;THETA=0.0006;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 27901507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7527;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27901572 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0223;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0003;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27901590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27901625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27901662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0084;AVGPOST=0.9969;RSQ=0.8439;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27901792 . TG T 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7406;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27901811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9663;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27901817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0277;AVGPOST=0.9983;RSQ=0.9756;ERATE=0.0005;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 27901850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7834;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27901864 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0972;AVGPOST=0.9981;RSQ=0.9907;ERATE=0.0005;THETA=0.0005;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 27901874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27901890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7867;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27902017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4779;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27902035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1270;AVGPOST=0.9977;RSQ=0.9917;ERATE=0.0006;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 27902039 . T TA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6175;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27902039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9380;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27902065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0085;AVGPOST=0.9964;RSQ=0.8371;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27902078 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0973;AVGPOST=0.9977;RSQ=0.9891;ERATE=0.0007;THETA=0.0006;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 27902148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0303;AVGPOST=0.9994;RSQ=0.9897;ERATE=0.0005;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27902217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.626;LDAF=0.0048;AVGPOST=0.9969;RSQ=0.7423;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27902227 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27902260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1288;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0005;THETA=0.0002;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 27902292 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5751;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27902301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5947;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27902317 . GT G 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6043;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27902381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1271;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 27902389 . AAT A 259 PASS INDEL;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7613;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27902421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4832;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27902444 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4520;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27902455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7848;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27902640 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1354;AVGPOST=0.9981;RSQ=0.9936;ERATE=0.0005;THETA=0.0007;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 27902667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8475;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27902719 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27902796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0970;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 27902803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8900;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27902839 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27902862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.811;LDAF=0.0129;AVGPOST=0.9936;RSQ=0.8194;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27902914 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9333;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27903008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27903052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5379;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27903121 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0091;AVGPOST=0.9979;RSQ=0.9173;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27903178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0967;AVGPOST=0.9987;RSQ=0.9940;ERATE=0.0004;THETA=0.0015;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 27903192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5794;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27903195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1278;AVGPOST=0.9981;RSQ=0.9939;ERATE=0.0003;THETA=0.0012;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 27903221 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1325;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 27903286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6961;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27903365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7846;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27903368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0945;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 27903388 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3414;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0006;THETA=0.0004;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 27903406 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1828;AVGPOST=0.9973;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 27903435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27903482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1849;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0004;THETA=0.0006;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 27903487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27903537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8151;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27903595 . AG A 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5086;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27903612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27903654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1843;AVGPOST=0.9978;RSQ=0.9941;ERATE=0.0005;THETA=0.0004;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 27903656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27903671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0531;AVGPOST=0.9991;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 27903672 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27903709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1854;AVGPOST=0.9977;RSQ=0.9937;ERATE=0.0004;THETA=0.0003;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 27903714 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.974;LDAF=0.1014;AVGPOST=0.9939;RSQ=0.9758;ERATE=0.0005;THETA=0.0004;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 27903734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0971;AVGPOST=0.9988;RSQ=0.9944;ERATE=0.0004;THETA=0.0003;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 27903750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27903796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27903806 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8521;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27903830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27903831 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0327;AVGPOST=0.9983;RSQ=0.9782;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 27903853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27903909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8086;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27904088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5720;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0020;AC=1250;AN=2184 GT:DS:GL:BD 0.57234430 1
1 27904108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27904140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0232;AVGPOST=0.9988;RSQ=0.9809;ERATE=0.0003;THETA=0.0017;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 27904303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7804;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27904326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4985;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0005;THETA=0.0005;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 27904342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0670;AVGPOST=0.9985;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 27904436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4973;AVGPOST=0.9979;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 27904483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27904502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6964;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27904528 . T TAAC 202 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5755;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27904699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5316;AVGPOST=0.9977;RSQ=0.9971;ERATE=0.0005;THETA=0.0003;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 27904753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4989;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27904775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4509;AVGPOST=0.9979;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 27904802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27904810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27904834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27904846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6601;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27904855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27904910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27904935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0092;AVGPOST=0.9984;RSQ=0.9254;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27904948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27904984 . T TTTTTTTTG 27526 PASS INDEL;BAVGPOST=0.928;BRSQ=0.875;LDAF=0.3903;AVGPOST=0.8516;RSQ=0.7722;ERATE=0.0327;THETA=0.0005;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 27905006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0033;AVGPOST=0.9963;RSQ=0.5630;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27905033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9817;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27905133 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6887;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27905232 . ATGTAT A 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4663;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27905235 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1074;AVGPOST=0.9980;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27905259 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7364;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27905384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7160;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27905444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4450;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27905458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0033;AVGPOST=0.9955;RSQ=0.4137;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27905515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1093;AVGPOST=0.9958;RSQ=0.9822;ERATE=0.0008;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 27905539 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0134;AVGPOST=0.9968;RSQ=0.9089;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27905582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9977;RSQ=0.3341;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27905664 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5518;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27905704 . T TA 23 PASS INDEL;BAVGPOST=0.995;BRSQ=0.590;LDAF=0.0143;AVGPOST=0.9830;RSQ=0.5192;ERATE=0.0032;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27905715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8465;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27905764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8228;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27905885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27905919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27905944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0953;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 27906090 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0091;AVGPOST=0.9983;RSQ=0.9309;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27906162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.748;LDAF=0.0074;AVGPOST=0.9976;RSQ=0.8676;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27906169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6649;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27906233 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1039;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 27906266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6277;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27906292 . TAAGC T 158 PASS INDEL;BAVGPOST=0.996;BRSQ=0.755;LDAF=0.0040;AVGPOST=0.9966;RSQ=0.6887;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27906334 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1081;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0005;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 27906353 . TCA T 172 PASS INDEL;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0051;AVGPOST=0.9968;RSQ=0.7550;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27906429 . AATG A 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27906579 rs77711505 G GA 98375 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9910;AVGPOST=0.9993;RSQ=0.9632;ERATE=0.0004;THETA=0.0007;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 27906635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6815;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27906676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7168;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27906685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27906709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27906738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9298;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27906763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3146;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0004;THETA=0.0007;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 27906764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4762;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27906783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27906819 . C CTAAA 169 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5184;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27906829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0047;AVGPOST=0.9967;RSQ=0.7053;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27906843 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1042;AVGPOST=0.9990;RSQ=0.9953;ERATE=0.0004;THETA=0.0010;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 27906922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4856;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27906986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1874;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 27907086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27907301 . GTTACTAATGTGTCCCCCTT G 738 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6934;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27907318 . CTAA C 105 PASS INDEL;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0054;AVGPOST=0.9978;RSQ=0.8330;ERATE=0.0004;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27907322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7208;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27907335 rs67529668 G GA 1725 PASS INDEL;BAVGPOST=0.988;BRSQ=0.855;LDAF=0.0402;AVGPOST=0.9945;RSQ=0.9464;ERATE=0.0005;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 27907382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0060;AVGPOST=0.9981;RSQ=0.8691;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27907413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27907454 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.744;LDAF=0.0223;AVGPOST=0.9843;RSQ=0.7286;ERATE=0.0026;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27907589 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.776;LDAF=0.1856;AVGPOST=0.8924;RSQ=0.6975;ERATE=0.0359;THETA=0.0002;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 27907590 . C CT 19 PASS INDEL;BAVGPOST=0.989;BRSQ=0.074;LDAF=0.0508;AVGPOST=0.9280;RSQ=0.4266;ERATE=0.0034;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27907671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.716;LDAF=0.0091;AVGPOST=0.9979;RSQ=0.9154;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27907696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3154;AVGPOST=0.9946;RSQ=0.9915;ERATE=0.0010;THETA=0.0003;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 27907849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0054;AVGPOST=0.9974;RSQ=0.8014;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27907902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27907951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5590;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27907952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1074;AVGPOST=0.9990;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27908054 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7641;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27908068 . TGTA T 820 PASS INDEL;BAVGPOST=0.995;BRSQ=0.719;LDAF=0.0118;AVGPOST=0.9945;RSQ=0.8133;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27908146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27908231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4194;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0023;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 27908252 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7206;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27908311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9993;AVGPOST=0.9987;RSQ=0.3629;ERATE=0.0003;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 27908332 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2483;AVGPOST=0.9966;RSQ=0.9941;ERATE=0.0005;THETA=0.0006;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 27908489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9575;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27908502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9970;AVGPOST=0.9994;RSQ=0.9081;ERATE=0.0004;THETA=0.0004;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 27908532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9636;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27908562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27908656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1868;AVGPOST=0.9951;RSQ=0.9874;ERATE=0.0009;THETA=0.0007;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 27908719 . T TAC 2802 PASS INDEL;BAVGPOST=0.809;BRSQ=0.542;LDAF=0.2616;AVGPOST=0.7865;RSQ=0.5637;ERATE=0.0236;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 27908792 . T TAC 15128 PASS INDEL;BAVGPOST=0.783;BRSQ=0.607;LDAF=0.5883;AVGPOST=0.7351;RSQ=0.5576;ERATE=0.0436;THETA=0.0006;AC=1363;AN=2184 GT:DS:GL:BD 0.62408423 1
1 27908794 rs71654831 ACACC A 294 PASS INDEL;BAVGPOST=0.965;BRSQ=0.329;LDAF=0.0606;AVGPOST=0.9261;RSQ=0.4926;ERATE=0.0074;THETA=0.0009;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 27908797 . CTA C 7697 PASS INDEL;BAVGPOST=0.904;BRSQ=0.819;LDAF=0.3040;AVGPOST=0.9057;RSQ=0.8483;ERATE=0.0087;THETA=0.0003;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 27908801 . T TACAC 4965 PASS INDEL;BAVGPOST=0.895;BRSQ=0.803;LDAF=0.3117;AVGPOST=0.9073;RSQ=0.8509;ERATE=0.0074;THETA=0.0002;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 27908802 . CTA C 728 PASS INDEL;BAVGPOST=0.983;BRSQ=0.818;LDAF=0.0772;AVGPOST=0.9336;RSQ=0.6488;ERATE=0.0084;THETA=0.0008;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 27908821 . C CG 63 PASS INDEL;BAVGPOST=0.991;BRSQ=0.560;LDAF=0.0232;AVGPOST=0.9673;RSQ=0.4366;ERATE=0.0032;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27908852 . C CA 42 PASS INDEL;BAVGPOST=0.990;BRSQ=0.546;LDAF=0.0118;AVGPOST=0.9838;RSQ=0.4500;ERATE=0.0015;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27908853 . A ACC 78 PASS INDEL;BAVGPOST=0.996;BRSQ=0.508;LDAF=0.0135;AVGPOST=0.9818;RSQ=0.5027;ERATE=0.0015;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27908865 rs71854057 CTA C 95 PASS INDEL;BAVGPOST=0.975;BRSQ=0.450;LDAF=0.0538;AVGPOST=0.9410;RSQ=0.5401;ERATE=0.0084;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 27908881 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.920;LDAF=0.0421;AVGPOST=0.9841;RSQ=0.8554;ERATE=0.0015;THETA=0.0006;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 27908887 rs71764451 CCTCTATAT C 614 PASS INDEL;BAVGPOST=0.987;BRSQ=0.490;LDAF=0.0272;AVGPOST=0.9776;RSQ=0.6680;ERATE=0.0016;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 27908924 rs71764451 C CTA 636 PASS INDEL;BAVGPOST=0.990;BRSQ=0.780;LDAF=0.0258;AVGPOST=0.9942;RSQ=0.9043;ERATE=0.0009;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 27908927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.505;LDAF=0.0129;AVGPOST=0.9866;RSQ=0.5997;ERATE=0.0011;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27908946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.462;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6129;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27908958 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.3396;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27908974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0141;AVGPOST=0.9960;RSQ=0.8725;ERATE=0.0007;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27908989 . C CTA 762 PASS INDEL;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0167;AVGPOST=0.9863;RSQ=0.6565;ERATE=0.0018;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27909045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.925;LDAF=0.1852;AVGPOST=0.9599;RSQ=0.9002;ERATE=0.0068;THETA=0.0003;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 27909065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4480;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27909295 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6942;ERATE=0.0004;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27909396 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.798;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9113;ERATE=0.0005;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27909416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1727;AVGPOST=0.9960;RSQ=0.9909;ERATE=0.0004;THETA=0.0013;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 27909485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27909491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5043;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27909538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.8884;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27909561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3134;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 27909586 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9992;RSQ=0.9784;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27909610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27909679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0110;AVGPOST=0.9992;RSQ=0.9679;ERATE=0.0005;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27909735 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27909785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27909900 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5915;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27909937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27909959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6770;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27909990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3123;AVGPOST=0.9956;RSQ=0.9920;ERATE=0.0009;THETA=0.0005;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 27910014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27910084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1112;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 27910093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1080;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 27910103 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.882;LDAF=0.0120;AVGPOST=0.9981;RSQ=0.9413;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27910156 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27910195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8901;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27910357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27910462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8927;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27910499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0681;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 27910588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9677;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27910637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0893;AVGPOST=0.9991;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 27910660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4754;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27910832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27910875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27910965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0855;AVGPOST=0.9993;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 27910967 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4700;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27911142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6546;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27911217 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0106;AVGPOST=0.9989;RSQ=0.9563;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27911266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3126;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0025;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 27911297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27911515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27911523 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0350;AVGPOST=0.9947;RSQ=0.9478;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 27911526 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27911663 . TAA T 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4445;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27911729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9497;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27911803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27911877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5669;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27912189 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9294;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27912198 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9588;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27912287 . G GC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7531;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27912301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27912394 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3105;AVGPOST=0.9938;RSQ=0.9890;ERATE=0.0008;THETA=0.0005;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 27912482 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27912656 . T TTAC 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6164;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27912685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27912814 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1105;AVGPOST=0.9981;RSQ=0.9920;ERATE=0.0005;THETA=0.0003;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 27912910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8721;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27912937 . GT G 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5009;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27913071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.875;LDAF=0.0172;AVGPOST=0.9957;RSQ=0.9004;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27913204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27913223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8873;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27913280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7553;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27913329 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3121;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 27913336 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.5498;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27913393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1022;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0003;THETA=0.0010;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 27913408 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9859;ERATE=0.0003;THETA=0.0035;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27913491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27914030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0304;AVGPOST=0.9982;RSQ=0.9769;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27914031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1041;AVGPOST=0.9991;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 27914186 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0855;AVGPOST=0.9985;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 27914206 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27914227 . GCA G 51 PASS INDEL;BAVGPOST=0.996;BRSQ=0.724;LDAF=0.0128;AVGPOST=0.9875;RSQ=0.6252;ERATE=0.0044;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27914306 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27914384 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6838;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27914413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5729;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27914422 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3293;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 27914456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6436;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27914523 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8517;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27914704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27914709 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27914829 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1556;AVGPOST=0.9985;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 27914869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27915119 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4377;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27915262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5980;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27915366 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7778;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27915382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27915397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9748;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27915429 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27915445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4425;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27915537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1546;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 27915676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.5166;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27915691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8314;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27915708 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9594;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27915790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27915817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27915822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4508;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 27915862 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27916067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1526;AVGPOST=0.9978;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 27916074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27916085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0223;AVGPOST=0.9989;RSQ=0.9789;ERATE=0.0002;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27916180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0003;AVGPOST=0.9997;RSQ=0.6564;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27916207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27916212 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6054;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27916240 . CTAAATAGTGGCT C 15224 PASS INDEL;BAVGPOST=0.980;BRSQ=0.896;LDAF=0.0903;AVGPOST=0.9877;RSQ=0.9470;ERATE=0.0007;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 27916264 . T TA 532 PASS INDEL;BAVGPOST=0.981;BRSQ=0.663;LDAF=0.0313;AVGPOST=0.9837;RSQ=0.8034;ERATE=0.0005;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27916277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27916278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9781;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27916299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7790;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27916555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6287;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27916578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9874;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27916586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5582;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27916642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0401;AVGPOST=0.9979;RSQ=0.9808;ERATE=0.0003;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 27916705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8758;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27916802 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27916863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9672;ERATE=0.0004;THETA=0.0030;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27916968 . A AG 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.4766;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27916979 . GC G 966 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9550;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27916993 . TCCCTTGAC T 328 PASS INDEL;BAVGPOST=0.998;BRSQ=0.736;LDAF=0.0059;AVGPOST=0.9945;RSQ=0.6315;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27917136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0431;AVGPOST=0.9950;RSQ=0.9531;ERATE=0.0005;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 27917151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7618;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27917152 . CT C 9112 PASS INDEL;BAVGPOST=0.972;BRSQ=0.953;LDAF=0.4001;AVGPOST=0.9738;RSQ=0.9604;ERATE=0.0006;THETA=0.0004;AC=880;AN=2184 GT:DS:GL:BD 0.40293041 0
1 27917195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.958;LDAF=0.4041;AVGPOST=0.9769;RSQ=0.9656;ERATE=0.0006;THETA=0.0004;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 27917196 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.955;LDAF=0.4007;AVGPOST=0.9667;RSQ=0.9514;ERATE=0.0025;THETA=0.0004;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 27917197 . C CA 10875 PASS INDEL;BAVGPOST=0.946;BRSQ=0.902;LDAF=0.4377;AVGPOST=0.8935;RSQ=0.8423;ERATE=0.0112;THETA=0.0004;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 27917197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0169;AVGPOST=0.9987;RSQ=0.9685;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 27917200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8853;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27917212 . GT G 229 PASS INDEL;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8916;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27917226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9686;ERATE=0.0002;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27917470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.965;LDAF=0.4210;AVGPOST=0.9841;RSQ=0.9772;ERATE=0.0004;THETA=0.0003;AC=919;AN=2184 GT:DS:GL:BD 0.42078754 0
1 27917565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.965;LDAF=0.4074;AVGPOST=0.9807;RSQ=0.9722;ERATE=0.0012;THETA=0.0008;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 27917566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27917589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0002;THETA=0.0100;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27917618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.6183;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27917628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0104;AVGPOST=0.9985;RSQ=0.9357;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27917650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4511;AVGPOST=0.9959;RSQ=0.9934;ERATE=0.0005;THETA=0.0004;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 27917716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.8036;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27917741 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7224;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27917778 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7827;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27917815 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27917835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27917861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6039;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 27917926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4396;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 27917991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4526;AVGPOST=0.9959;RSQ=0.9934;ERATE=0.0008;THETA=0.0013;AC=987;AN=2184 GT:DS:GL:BD 0.45192307 0
1 27918352 . C CT 17 PASS INDEL;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27918371 rs10644958 G GTGTC 91441 PASS INDEL;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.6022;AVGPOST=0.9951;RSQ=0.9922;ERATE=0.0006;THETA=0.0002;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 27918841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.958;LDAF=0.0859;AVGPOST=0.9946;RSQ=0.9737;ERATE=0.0005;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 27918849 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4395;AVGPOST=0.9923;RSQ=0.9879;ERATE=0.0017;THETA=0.0004;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 27918948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.4097;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27919117 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7187;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27919162 . CT C 422 PASS INDEL;BAVGPOST=0.997;BRSQ=0.811;LDAF=0.0097;AVGPOST=0.9935;RSQ=0.7577;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27919227 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4520;AVGPOST=0.9926;RSQ=0.9885;ERATE=0.0015;THETA=0.0003;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 27919460 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7205;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27919608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4743;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27919663 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4394;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 27919664 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7066;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27919742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.599;LDAF=0.0137;AVGPOST=0.9843;RSQ=0.5521;ERATE=0.0028;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27920260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.900;LDAF=0.0225;AVGPOST=0.9933;RSQ=0.8802;ERATE=0.0010;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27920703 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3260;AVGPOST=0.9950;RSQ=0.9912;ERATE=0.0009;THETA=0.0004;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 27920793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.926;LDAF=0.0887;AVGPOST=0.9892;RSQ=0.9490;ERATE=0.0004;THETA=0.0003;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 27921638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.902;LDAF=0.0681;AVGPOST=0.9939;RSQ=0.9570;ERATE=0.0009;THETA=0.0003;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 27922147 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0860;AVGPOST=0.9812;RSQ=0.9029;ERATE=0.0019;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 27922178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4829;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27922347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1991;AVGPOST=0.9968;RSQ=0.9918;ERATE=0.0004;THETA=0.0004;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 27922448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8024;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27922517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27922537 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1239;AVGPOST=0.9985;RSQ=0.9946;ERATE=0.0004;THETA=0.0009;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 27922745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8413;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27922831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.888;LDAF=0.0219;AVGPOST=0.9942;RSQ=0.9039;ERATE=0.0004;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27922833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0080;AVGPOST=0.9991;RSQ=0.9576;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27922909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0311;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 27922982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27922990 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9724;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27922997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1903;AVGPOST=0.9979;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 27923014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8556;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27923036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27923155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7252;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27923265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0659;AVGPOST=0.9990;RSQ=0.9932;ERATE=0.0004;THETA=0.0002;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 27923361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7964;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27923388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3234;AVGPOST=0.9930;RSQ=0.9876;ERATE=0.0006;THETA=0.0008;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 27923468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6566;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27923506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27923579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8548;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27923659 . GTGAA G 61 PASS INDEL;BAVGPOST=0.997;BRSQ=0.770;LDAF=0.0142;AVGPOST=0.9851;RSQ=0.5978;ERATE=0.0037;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27923710 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27923923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.9790;AVGPOST=0.9971;RSQ=0.9451;ERATE=0.0003;THETA=0.0007;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 27923934 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9424;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27924022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8832;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27924080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27924356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27924471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27924487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0100;AVGPOST=0.9987;RSQ=0.9499;ERATE=0.0010;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27924490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27924492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27924519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27924520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0640;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0007;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 27924533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0526;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 27924548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27924621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27924766 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27924866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27924895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27924986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9349;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27925026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8369;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27925038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0642;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 27925213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1234;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0006;THETA=0.0002;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 27925219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27925323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6607;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0007;THETA=0.0005;AC=1444;AN=2184 GT:DS:GL:BD 0.66117215 1
1 27925389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27925519 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27925559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27925594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5918;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27925656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5012;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27925809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6463;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27925855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4886;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27925875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.921;LDAF=0.0375;AVGPOST=0.9941;RSQ=0.9411;ERATE=0.0005;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 27925878 rs113773184 AAAT A 2387 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0207;AVGPOST=0.9972;RSQ=0.9380;ERATE=0.0006;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27925901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27926140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27926246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27926276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8616;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27926368 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8695;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27926464 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5388;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27926468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4749;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27926511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27926826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.923;LDAF=0.0758;AVGPOST=0.9870;RSQ=0.9347;ERATE=0.0008;THETA=0.0002;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 27927017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2064;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 27927028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5922;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27927157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8699;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27927203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27927502 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27927580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1864;AVGPOST=0.9969;RSQ=0.9922;ERATE=0.0004;THETA=0.0002;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 27927704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6822;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=1491;AN=2184 GT:DS:GL:BD 0.68269229 1
1 27927763 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27927764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27927867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27927888 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27927908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1088;AVGPOST=0.9977;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 27928076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7386;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27928153 . TAAG T 6273 PASS INDEL;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0311;AVGPOST=0.9982;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 27928188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.4231;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 27928202 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.8986;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27928268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9185;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=2006;AN=2184 GT:DS:GL:BD 0.91849816 1
1 27928294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27928354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8824;AVGPOST=0.9983;RSQ=0.9937;ERATE=0.0005;THETA=0.0005;AC=1928;AN=2184 GT:DS:GL:BD 0.88278389 1
1 27928406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.647;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7584;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27928435 . A AAG 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6376;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27928456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27928734 . CT C 17480 PASS INDEL;BAVGPOST=0.971;BRSQ=0.899;LDAF=0.8385;AVGPOST=0.9271;RSQ=0.8051;ERATE=0.0156;THETA=0.0004;AC=1891;AN=2184 GT:DS:GL:BD 0.86584246 1
1 27928789 rs61400033 TC T 80553 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8822;AVGPOST=0.9990;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=1927;AN=2184 GT:DS:GL:BD 0.88232601 1
1 27928790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27929048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8823;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27929158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5016;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27929179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5869;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27929359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.9265;AVGPOST=0.9976;RSQ=0.9870;ERATE=0.0005;THETA=0.0006;AC=2024;AN=2184 GT:DS:GL:BD 0.92673993 1
1 27929579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.810;LDAF=0.0117;AVGPOST=0.9951;RSQ=0.8368;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27929582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8762;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27929656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0355;AVGPOST=0.9969;RSQ=0.9640;ERATE=0.0004;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 27929666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7457;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27929667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.6617;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 27929731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9513;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27929825 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6340;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27929952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6755;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27929980 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0036;AVGPOST=0.9980;RSQ=0.8046;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27930104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27930108 . C CA 23 PASS INDEL;BAVGPOST=0.992;BRSQ=0.565;LDAF=0.0216;AVGPOST=0.9728;RSQ=0.4890;ERATE=0.0065;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27930144 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7884;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27930145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0247;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0001;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 27930174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27930296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27930316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8216;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27930399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9980;AVGPOST=0.9961;RSQ=0.1583;ERATE=0.0011;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 27930510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8454;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27930576 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.974;LDAF=0.2218;AVGPOST=0.9865;RSQ=0.9744;ERATE=0.0003;THETA=0.0002;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 27930841 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.974;LDAF=0.2541;AVGPOST=0.9864;RSQ=0.9767;ERATE=0.0007;THETA=0.0004;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 27930842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27930944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0098;AVGPOST=0.9987;RSQ=0.9470;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27930948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8788;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27931042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9549;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27931133 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8156;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27931139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27931159 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9994;RSQ=0.9730;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27931217 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0225;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 27931246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2527;AVGPOST=0.9967;RSQ=0.9936;ERATE=0.0007;THETA=0.0006;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 27931352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5715;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27931379 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27931558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27931587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2295;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0004;THETA=0.0013;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 27931594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27931627 . C CA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6125;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27931688 . AGT A 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6704;ERATE=0.0007;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27931767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27931770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6023;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27931846 . CCAT C 2043 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0217;AVGPOST=0.9991;RSQ=0.9828;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 27931855 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3297;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 27931932 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3286;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0003;THETA=0.0055;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 27931942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0021;AVGPOST=0.9996;RSQ=0.9348;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27931959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27932186 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4395;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27932197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6334;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27932477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0714;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 27932627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27932638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5644;AVGPOST=0.9937;RSQ=0.9899;ERATE=0.0015;THETA=0.0013;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 27932647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2188;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0004;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 27932711 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2189;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 27932715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27932864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.0705;AVGPOST=0.9940;RSQ=0.9729;ERATE=0.0004;THETA=0.0005;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 27933094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0004;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27933348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27933420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6814;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27933440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2173;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0004;THETA=0.0009;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 27933500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27933552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5346;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27933582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9163;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27933702 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7306;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27933731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.7951;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27933842 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27933919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0129;AVGPOST=0.9983;RSQ=0.9468;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27933925 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8883;ERATE=0.0004;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27933984 . AC A 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6258;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27934100 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27934134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9056;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27934174 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27934244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27934424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8560;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27934550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7709;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27934601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8222;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27934602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0069;AVGPOST=0.9991;RSQ=0.9446;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27934695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9170;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27934773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6738;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27934904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4897;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27934924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7956;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27935046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0110;AVGPOST=0.9978;RSQ=0.9207;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27935165 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0192;AVGPOST=0.9965;RSQ=0.9371;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 27935169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27935255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27935489 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5220;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27935691 . AT A 108 PASS INDEL;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7354;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27935727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27935911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27935938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1323;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 27936004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1734;AVGPOST=0.9980;RSQ=0.9945;ERATE=0.0006;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 27936053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6886;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27936308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27936320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3338;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 27936343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6733;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27936344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0276;AVGPOST=0.9969;RSQ=0.9585;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27936382 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6729;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27936396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9179;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27936574 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9715;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27936605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27936620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3339;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 27936645 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3344;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 27936764 . T TA 210 PASS INDEL;BAVGPOST=0.981;BRSQ=0.493;LDAF=0.0277;AVGPOST=0.9682;RSQ=0.5291;ERATE=0.0070;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27936821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5622;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0007;THETA=0.0004;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 27936857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9603;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27936903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5188;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27936948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.968;LDAF=0.3133;AVGPOST=0.9838;RSQ=0.9767;ERATE=0.0004;THETA=0.0004;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 27937004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.968;LDAF=0.3128;AVGPOST=0.9844;RSQ=0.9774;ERATE=0.0004;THETA=0.0004;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 27937005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.8962;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=1956;AN=2184 GT:DS:GL:BD 0.89560437 1
1 27937011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6738;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27937137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9039;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27937198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0360;AVGPOST=0.9991;RSQ=0.9901;ERATE=0.0003;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 27937365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27937422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8902;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27937432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8577;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27937437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1383;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 27937516 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5631;AVGPOST=0.9909;RSQ=0.9866;ERATE=0.0025;THETA=0.0008;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 27937531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1383;AVGPOST=0.9919;RSQ=0.9758;ERATE=0.0010;THETA=0.0002;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 27937543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3334;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 27937581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0705;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 27937654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27937707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9154;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27937786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27937934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1140;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 27937942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7772;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27938106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27938134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.9013;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27938160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6915;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27938406 . CAT C 1072 PASS INDEL;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0075;AVGPOST=0.9981;RSQ=0.8878;ERATE=0.0006;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27938437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27938593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27938623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27938664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8112;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27938845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0708;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 27939067 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27939068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9483;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27939132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8042;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27939324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27939417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7794;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27939660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5796;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27939680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7843;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27939807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27939900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8445;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27939922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5981;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27939996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27940100 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27940114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4872;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27940144 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5626;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0006;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 27940151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27940172 rs72089120 T TGC 1445 PASS INDEL;BAVGPOST=0.966;BRSQ=0.596;LDAF=0.0618;AVGPOST=0.9338;RSQ=0.5695;ERATE=0.0093;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 27940245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0147;AVGPOST=0.9963;RSQ=0.9193;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27940247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8459;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27940325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5624;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 27940369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27940423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1331;AVGPOST=0.9979;RSQ=0.9938;ERATE=0.0005;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 27940468 . AC A 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27940479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0810;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0011;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27940483 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0176;AVGPOST=0.9987;RSQ=0.9713;ERATE=0.0004;THETA=0.0014;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27940532 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9993;RSQ=0.9856;ERATE=0.0004;THETA=0.0011;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 27940595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1087;AVGPOST=0.9980;RSQ=0.9926;ERATE=0.0004;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27940647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0810;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0010;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27940704 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1079;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0011;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27940753 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27940755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27940822 . G GA 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8420;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27940872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0806;AVGPOST=0.9988;RSQ=0.9930;ERATE=0.0004;THETA=0.0009;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27940879 . TAAC T 772 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27940887 rs35769688 AC A 10329 PASS INDEL;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0802;AVGPOST=0.9971;RSQ=0.9851;ERATE=0.0004;THETA=0.0019;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 27940889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0810;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0008;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27940985 rs60799136 C CTG 18214 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1107;AVGPOST=0.9947;RSQ=0.9810;ERATE=0.0007;THETA=0.0010;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 27941014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27941052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.509;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7384;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27941134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6616;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27941292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0811;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27941343 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6825;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27941376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0810;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27941380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8591;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27941485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0009;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27941491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27941495 rs112253418 A AC 3016 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0189;AVGPOST=0.9989;RSQ=0.9756;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27941542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.6350;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27941579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0188;AVGPOST=0.9981;RSQ=0.9608;ERATE=0.0004;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 27941584 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27941633 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1079;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27941731 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.943;LDAF=0.1227;AVGPOST=0.9853;RSQ=0.9508;ERATE=0.0080;THETA=0.0006;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 27941786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0266;AVGPOST=0.9988;RSQ=0.9838;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27941788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0809;AVGPOST=0.9993;RSQ=0.9961;ERATE=0.0003;THETA=0.0009;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27941949 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0279;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0011;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 27941961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0270;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27941964 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5471;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27942003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27942035 rs61128748 C CT 17228 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1094;AVGPOST=0.9971;RSQ=0.9899;ERATE=0.0003;THETA=0.0012;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 27942064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27942076 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0011;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27942096 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.4774;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 27942102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0245;AVGPOST=0.9994;RSQ=0.9894;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 27942264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6046;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27942431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27942432 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27942442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27942498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1087;AVGPOST=0.9982;RSQ=0.9926;ERATE=0.0005;THETA=0.0008;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 27942585 . CCT C 103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7709;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27942630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.7992;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27942636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9659;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27942639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0004;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27942719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.607;LDAF=0.9951;AVGPOST=0.9974;RSQ=0.7793;ERATE=0.0003;THETA=0.0007;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 27942746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0378;AVGPOST=0.9991;RSQ=0.9889;ERATE=0.0003;THETA=0.0010;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 27942788 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8096;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27942791 . C CAAG 1318 PASS INDEL;BAVGPOST=0.976;BRSQ=0.662;LDAF=0.0518;AVGPOST=0.9597;RSQ=0.7061;ERATE=0.0100;THETA=0.0009;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 27942881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8369;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27942896 . TAACTC T 4974 PASS INDEL;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0266;AVGPOST=0.9989;RSQ=0.9834;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27943106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0284;AVGPOST=0.9994;RSQ=0.9906;ERATE=0.0003;THETA=0.0009;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27943145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1080;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0004;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27943160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0812;AVGPOST=0.9991;RSQ=0.9947;ERATE=0.0004;THETA=0.0008;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27943241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1079;AVGPOST=0.9993;RSQ=0.9970;ERATE=0.0004;THETA=0.0008;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27943363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7980;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27943628 . AAC A 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0082;AVGPOST=0.9930;RSQ=0.6739;ERATE=0.0036;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27943659 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27943738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27943825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7363;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27943884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.934;LDAF=0.0337;AVGPOST=0.9960;RSQ=0.9528;ERATE=0.0005;THETA=0.0007;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 27943951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9659;ERATE=0.0004;THETA=0.0013;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27943952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4046;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27944008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9324;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27944059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7902;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27944317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27944379 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6847;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27944433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27944470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0809;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27944471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5491;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27944483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0803;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0019;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 27944526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27944703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1079;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0009;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27944713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0272;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27944799 . CATTTT C 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27944868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27944930 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.895;LDAF=0.0273;AVGPOST=0.9957;RSQ=0.9440;ERATE=0.0004;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27944990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1080;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0004;THETA=0.0018;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27945006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27945076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0814;AVGPOST=0.9989;RSQ=0.9924;ERATE=0.0004;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 27945091 . AG A 157 PASS INDEL;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8069;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27945166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6783;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27945283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8342;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27945287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1159;AVGPOST=0.9959;RSQ=0.9838;ERATE=0.0007;THETA=0.0008;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 27945476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3279;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 27945567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27945795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27946034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5620;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27946085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6400;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27946140 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2533;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 27946172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8819;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27946284 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 27946337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27946438 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6648;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27946610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27946630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27946661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9780;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27946786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5502;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27946943 . TTA T 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4821;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27947070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8806;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27947200 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27947203 rs35237268 GA G 1882 PASS INDEL;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0178;AVGPOST=0.9975;RSQ=0.9387;ERATE=0.0004;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 27947239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8229;AVGPOST=0.9974;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=1796;AN=2184 GT:DS:GL:BD 0.82234430 1
1 27947308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7354;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27947349 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8535;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27947423 rs35561966 T TA 1467 PASS INDEL;BAVGPOST=0.989;BRSQ=0.848;LDAF=0.0410;AVGPOST=0.9771;RSQ=0.7797;ERATE=0.0041;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 27947516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0096;AVGPOST=0.9987;RSQ=0.9466;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27947540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27947606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1407;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 27947745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9919;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27947775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1309;AVGPOST=0.9968;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 27947789 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0663;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 27947836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27947985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6990;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27948006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27948045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6994;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=1527;AN=2184 GT:DS:GL:BD 0.69917583 1
1 27948046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8781;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27948056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27948128 . TTCC T 1334 PASS INDEL;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0058;AVGPOST=0.9968;RSQ=0.8010;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27948217 . ACT A 204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3534;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27948267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27948305 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27948326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0272;AVGPOST=0.9968;RSQ=0.9635;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27948576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2810;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 27948731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27948830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27948977 . GCA G 778 PASS INDEL;BAVGPOST=0.960;BRSQ=0.668;LDAF=0.1082;AVGPOST=0.8945;RSQ=0.5308;ERATE=0.0416;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 27948978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1253;AVGPOST=0.9947;RSQ=0.9832;ERATE=0.0007;THETA=0.0002;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 27948980 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.5105;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27949146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5586;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27949147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2584;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 27949328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27949551 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8938;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27949587 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27949591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0109;AVGPOST=0.9973;RSQ=0.8873;ERATE=0.0005;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27949622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8135;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27949642 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5178;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27949776 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27950056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9229;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27950426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9002;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27950483 . AAG A 86 PASS INDEL;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5148;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27950631 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9768;ERATE=0.0003;THETA=0.0022;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27950654 . AC A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4633;ERATE=0.0003;THETA=0.0116;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27950711 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27950750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27950827 . A AC 144 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5969;ERATE=0.0007;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27950841 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2579;AVGPOST=0.9969;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 27950850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2588;AVGPOST=0.9968;RSQ=0.9930;ERATE=0.0006;THETA=0.0010;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 27950907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8377;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27950926 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5954;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27951048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7364;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27951080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5108;AVGPOST=0.9949;RSQ=0.9916;ERATE=0.0009;THETA=0.0013;AC=1117;AN=2184 GT:DS:GL:BD 0.51144689 1
1 27951084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27951153 . CTAAA C 182 PASS INDEL;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4446;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27951190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8352;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27951217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3448;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27951257 . C CA 1931 PASS INDEL;BAVGPOST=0.987;BRSQ=0.920;LDAF=0.0357;AVGPOST=0.9927;RSQ=0.9244;ERATE=0.0006;THETA=0.0009;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 27951433 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9148;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27951660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9465;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27951666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8514;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27951669 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27951741 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7683;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27951747 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2482;AVGPOST=0.9968;RSQ=0.9938;ERATE=0.0004;THETA=0.0010;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 27951800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27951816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9718;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27951899 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27951952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1653;AVGPOST=0.9979;RSQ=0.9941;ERATE=0.0004;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 27951987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9996;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27952169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.7958;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27952205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9169;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27952409 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27952466 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2472;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 27952572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9706;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27952732 rs61647462 CATA C 28999 PASS INDEL;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2556;AVGPOST=0.9925;RSQ=0.9836;ERATE=0.0009;THETA=0.0007;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 27952816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27952844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2581;AVGPOST=0.9980;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 27952845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5131;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27952964 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27953109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27953161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2151;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 27953168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8845;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27953386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8851;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27953419 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27953577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4117;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 27953652 . CT C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7375;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27953659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27953697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9641;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27953701 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2050;AVGPOST=0.9978;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 27953829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2479;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 27953871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27953896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1667;AVGPOST=0.9981;RSQ=0.9949;ERATE=0.0007;THETA=0.0014;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 27953972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4010;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0004;THETA=0.0001;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 27954037 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2476;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 27954103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27954296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8333;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27954353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1934;AVGPOST=0.9955;RSQ=0.9887;ERATE=0.0004;THETA=0.0004;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 27954354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0050;AVGPOST=0.9977;RSQ=0.8411;ERATE=0.0003;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27954359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5916;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27954410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27954426 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27954438 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27954578 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8147;ERATE=0.0004;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27954582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.2694;AVGPOST=0.9711;RSQ=0.9428;ERATE=0.0043;THETA=0.0059;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 27954591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.570;LDAF=0.0366;AVGPOST=0.9582;RSQ=0.5530;ERATE=0.0066;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27954612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4776;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27954701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.716;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.7873;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27954733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9662;ERATE=0.0003;THETA=0.0032;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27954762 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27954772 . TATG T 57 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27954793 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5556;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27954896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2621;AVGPOST=0.9952;RSQ=0.9904;ERATE=0.0005;THETA=0.0008;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 27955041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4583;AVGPOST=0.9909;RSQ=0.9871;ERATE=0.0015;THETA=0.0003;AC=1000;AN=2184 GT:DS:GL:BD 0.45787546 0
1 27955077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9072;ERATE=0.0003;THETA=0.0031;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27955186 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6732;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0008;THETA=0.0006;AC=1472;AN=2184 GT:DS:GL:BD 0.67399269 1
1 27955257 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27955448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3729;AVGPOST=0.9967;RSQ=0.9949;ERATE=0.0005;THETA=0.0007;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 27955475 . G GT 35307 PASS INDEL;BAVGPOST=0.994;BRSQ=0.959;LDAF=0.9309;AVGPOST=0.9920;RSQ=0.9484;ERATE=0.0010;THETA=0.0012;AC=2038;AN=2184 GT:DS:GL:BD 0.93315017 1
1 27955878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5249;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27956119 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27956161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0166;AVGPOST=0.9957;RSQ=0.8993;ERATE=0.0003;THETA=0.0013;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27956164 . G GC 5 PASS INDEL;BAVGPOST=0.997;BRSQ=0.476;LDAF=0.0102;AVGPOST=0.9871;RSQ=0.5511;ERATE=0.0008;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27956182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7795;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27956199 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9985;RSQ=0.9434;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27956506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7217;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27956672 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27956858 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27956930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27956992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9369;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=2046;AN=2184 GT:DS:GL:BD 0.93681318 1
1 27957064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27957120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0007;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27957128 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6207;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27957301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0110;AVGPOST=0.9997;RSQ=0.9859;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27957327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27957360 rs72397209 C CA 346 PASS INDEL;BAVGPOST=0.580;BRSQ=0.097;LDAF=0.2312;AVGPOST=0.7887;RSQ=0.5361;ERATE=0.0093;THETA=0.0006;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 27957487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9213;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27957604 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1491;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0003;THETA=0.0008;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 27957717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.747;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8092;ERATE=0.0006;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27957816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5546;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27957938 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4059;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27958029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.6449;AVGPOST=0.9949;RSQ=0.9923;ERATE=0.0007;THETA=0.0013;AC=1410;AN=2184 GT:DS:GL:BD 0.64560437 1
1 27958091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.754;LDAF=0.0098;AVGPOST=0.9966;RSQ=0.8544;ERATE=0.0008;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27958094 . TA T 91 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27958101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.950;LDAF=0.4722;AVGPOST=0.9713;RSQ=0.9607;ERATE=0.0006;THETA=0.0004;AC=1028;AN=2184 GT:DS:GL:BD 0.47069597 0
1 27958175 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4832;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27958204 . TAACC T 2938 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9975;RSQ=0.9419;ERATE=0.0005;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 27958255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1480;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0002;THETA=0.0012;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 27958306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0109;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0002;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27958371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27958387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27958628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27958699 . A AG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27958958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0002;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27959032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27959185 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27959211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27959284 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27959374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27959678 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9521;ERATE=0.0003;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27959691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27959707 . TACA T 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6663;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27959717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9366;AVGPOST=0.9993;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=2046;AN=2184 GT:DS:GL:BD 0.93681318 1
1 27960023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27960254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8506;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27960366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.9353;AVGPOST=0.9981;RSQ=0.9867;ERATE=0.0005;THETA=0.0005;AC=2044;AN=2184 GT:DS:GL:BD 0.93589741 1
1 27960475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9639;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27960656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.531;LDAF=0.0125;AVGPOST=0.9877;RSQ=0.6435;ERATE=0.0007;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27960680 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0043;AVGPOST=0.9977;RSQ=0.8060;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27960695 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27960802 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.704;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7755;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27960846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27961077 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27961099 . G GTA 18 PASS INDEL;BAVGPOST=0.976;BRSQ=0.109;LDAF=0.0787;AVGPOST=0.8873;RSQ=0.4045;ERATE=0.0039;THETA=0.0021;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 27961140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.6023;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27961214 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27961422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0243;AVGPOST=0.9987;RSQ=0.9818;ERATE=0.0003;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 27961459 . GT G 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4551;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27961675 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27961681 . TG T 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27961700 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27961706 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2744;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0003;THETA=0.0010;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 27961808 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0087;AVGPOST=0.9979;RSQ=0.8944;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27961909 . C CTA 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27962116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.9960;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0008;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 27962135 . C CA 21 PASS INDEL;BAVGPOST=0.996;BRSQ=0.615;LDAF=0.0065;AVGPOST=0.9920;RSQ=0.5068;ERATE=0.0014;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27962188 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9514;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27962193 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7242;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27962542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27962597 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27962649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0222;AVGPOST=0.9994;RSQ=0.9884;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 27962757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0004;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27962829 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9400;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27962953 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2745;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0005;THETA=0.0013;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 27962958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.523;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7222;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27963232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0449;AVGPOST=0.9971;RSQ=0.9721;ERATE=0.0005;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 27963313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8402;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27963545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7382;ERATE=0.0004;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27963547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27963731 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7089;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27963796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2747;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0008;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 27964037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7792;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27964047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0076;AVGPOST=0.9991;RSQ=0.9498;ERATE=0.0005;THETA=0.0047;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 27964076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27964142 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27964164 . C CA 843 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9664;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27964250 . TGGATA T 1003 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9375;ERATE=0.0004;THETA=0.0018;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 27964253 . TTTTG T 121 PASS INDEL;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0044;AVGPOST=0.9956;RSQ=0.6136;ERATE=0.0006;THETA=0.0055;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27964543 . TTG T 832 PASS INDEL;BAVGPOST=0.908;BRSQ=0.560;LDAF=0.1020;AVGPOST=0.9247;RSQ=0.7069;ERATE=0.0067;THETA=0.0004;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 27964563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6125;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27964593 . G GT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3435;ERATE=0.0007;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27964614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2772;AVGPOST=0.9900;RSQ=0.9857;ERATE=0.0009;THETA=0.0025;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 27964663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2470;AVGPOST=0.9942;RSQ=0.9908;ERATE=0.0006;THETA=0.0007;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 27964677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8172;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27964890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0050;AVGPOST=0.9993;RSQ=0.9425;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27964921 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9807;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27965031 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2481;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0003;THETA=0.0007;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 27965106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9819;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27965176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2750;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 27965254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9098;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27965328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7905;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27965451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.931;LDAF=0.0484;AVGPOST=0.9904;RSQ=0.9246;ERATE=0.0003;THETA=0.0009;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 27965460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6675;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27965510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2786;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0020;THETA=0.0006;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 27965511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7891;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27965569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27965638 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0170;AVGPOST=0.9989;RSQ=0.9800;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27965729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0085;AVGPOST=0.9983;RSQ=0.9283;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27965740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0252;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 27965787 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4797;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27965798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6798;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27965859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2502;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0008;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 27966009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.503;LDAF=0.0055;AVGPOST=0.9941;RSQ=0.5551;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27966139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27966180 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0004;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 27966292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.938;LDAF=0.6369;AVGPOST=0.9338;RSQ=0.8948;ERATE=0.0138;THETA=0.0003;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 27966583 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.8844;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27966620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0262;AVGPOST=0.9967;RSQ=0.9581;ERATE=0.0005;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 27966698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27967045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8925;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27967089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.696;LDAF=0.0164;AVGPOST=0.9835;RSQ=0.6137;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27967168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27967246 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27967261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27967282 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.3496;AVGPOST=0.9958;RSQ=0.9923;ERATE=0.0008;THETA=0.0010;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 27967336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4619;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27967338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27967357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.973;LDAF=0.2867;AVGPOST=0.9877;RSQ=0.9779;ERATE=0.0005;THETA=0.0041;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 27967538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6070;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=1325;AN=2184 GT:DS:GL:BD 0.60668498 1
1 27967659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7872;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27967791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9066;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27967899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0051;AVGPOST=0.9982;RSQ=0.8648;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27967908 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9419;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27968054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9159;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27968257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27968275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0052;AVGPOST=0.9991;RSQ=0.9374;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27968300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27968330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27968380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27968433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6693;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27968447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.804;LDAF=0.0066;AVGPOST=0.9955;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27968502 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6443;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27968519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6876;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=1502;AN=2184 GT:DS:GL:BD 0.68772894 1
1 27968536 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27968697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27968754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0601;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0004;THETA=0.0007;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 27968773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27968781 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6056;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 27968792 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9982;RSQ=0.3751;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27968809 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27968822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27968897 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27968924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27968933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2509;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 27968962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6880;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0004;THETA=0.0003;AC=1502;AN=2184 GT:DS:GL:BD 0.68772894 1
1 27969026 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27969030 . CT C 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5397;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27969035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3513;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 27969150 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0303;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27969174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27969244 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0207;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27969412 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0204;AVGPOST=0.9993;RSQ=0.9866;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27969435 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6786;ERATE=0.0006;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27969549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.930;LDAF=0.6337;AVGPOST=0.9497;RSQ=0.9189;ERATE=0.0130;THETA=0.0002;AC=1398;AN=2184 GT:DS:GL:BD 0.64010990 1
1 27969638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7784;ERATE=0.0017;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27969848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9270;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27969967 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27970004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27970057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27970071 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27970083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6789;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27970092 rs34997677 A AT 1631 PASS INDEL;BAVGPOST=0.995;BRSQ=0.914;LDAF=0.0239;AVGPOST=0.9943;RSQ=0.8998;ERATE=0.0005;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 27970132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27970163 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6937;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27970223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27970259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0026;AVGPOST=0.9963;RSQ=0.5988;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27970344 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27970400 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5445;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27970462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8470;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27970482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27970483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2386;AVGPOST=0.9968;RSQ=0.9933;ERATE=0.0013;THETA=0.0002;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 27970636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.857;LDAF=0.0112;AVGPOST=0.9978;RSQ=0.9068;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27970751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8959;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27970824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9997;RSQ=0.9877;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27970874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.7017;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27970936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8471;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27970959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27970974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0002;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27970977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27971032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8340;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27971122 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3116;AVGPOST=0.9966;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 27971150 . AAGAG A 178 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8643;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27971195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27971203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27971221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1666;AVGPOST=0.9977;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 27971229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27971265 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6941;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27971290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27971350 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8606;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27971363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27971454 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27971470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27971563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27971646 . AT A 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7354;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27971716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27971769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9104;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 27971802 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0293;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27971835 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27971864 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27971880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9748;ERATE=0.0002;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 27971888 . A AT 361 PASS INDEL;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8018;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27972097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7327;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 27972154 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4842;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27972181 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0026;AVGPOST=0.9966;RSQ=0.4762;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27972244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9731;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27972406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27972409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9986;RSQ=0.9637;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27972455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0869;AVGPOST=0.9984;RSQ=0.9921;ERATE=0.0005;THETA=0.0003;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 27972474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5819;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27972497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7995;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27972829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27972924 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5627;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27972957 rs34774157 GT G 18919 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1772;AVGPOST=0.9980;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 27972990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.704;LDAF=0.0281;AVGPOST=0.9725;RSQ=0.6064;ERATE=0.0093;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27973000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9419;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27973042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27973044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9089;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=1985;AN=2184 GT:DS:GL:BD 0.90888280 1
1 27973051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27973068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27973115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1651;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 27973118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0148;AVGPOST=0.9988;RSQ=0.9675;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27973143 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7363;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27973272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8525;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27973362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.862;LDAF=0.0121;AVGPOST=0.9971;RSQ=0.9124;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27973410 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7331;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 27973546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9953;ERATE=0.0002;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27973791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0116;AVGPOST=0.9966;RSQ=0.8916;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27973981 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8109;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27974134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27974205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5317;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27974369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9013;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27974370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0294;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27974452 . TA T 493 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8133;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27974524 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7828;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27974551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1780;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 27974553 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0109;AVGPOST=0.9987;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27974571 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27974576 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27974720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27974794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0398;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 27974872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27974903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9076;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=1982;AN=2184 GT:DS:GL:BD 0.90750915 1
1 27974978 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0398;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 27975027 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27975044 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27975055 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27975060 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7366;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27975100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7328;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 27975113 . CA C 172 PASS INDEL;BAVGPOST=0.999;BRSQ=0.515;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4511;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27975170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6927;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27975284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9091;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1985;AN=2184 GT:DS:GL:BD 0.90888280 1
1 27975325 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8979;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1961;AN=2184 GT:DS:GL:BD 0.89789379 1
1 27975361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6840;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27975411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27975526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6371;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27975535 . A AT 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5545;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27975625 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9832;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27975660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6927;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27975667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8025;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27975668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.9097;AVGPOST=0.9983;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 27975674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1332;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 27975876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27975884 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27975964 . CAGG C 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0025;AVGPOST=0.9960;RSQ=0.4067;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27976060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7161;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27976097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9483;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27976124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9811;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 27976125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6509;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27976530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2779;AVGPOST=0.9963;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 27976704 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8880;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27976752 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0263;AVGPOST=0.9989;RSQ=0.9846;ERATE=0.0002;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 27976822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9628;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27976976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9649;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27977055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2274;AVGPOST=0.9975;RSQ=0.9942;ERATE=0.0005;THETA=0.0002;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 27977063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27977145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0604;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0009;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 27977480 . CT C 501 PASS INDEL;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8425;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27977499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27977541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9641;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27977550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7851;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27977659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9984;RSQ=0.9563;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 27977725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8152;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27977838 . ATACAG A 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5502;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27977919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0144;AVGPOST=0.9972;RSQ=0.9216;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27977984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0112;AVGPOST=0.9975;RSQ=0.9217;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27977992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8267;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27978161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.8109;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27978163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0069;AVGPOST=0.9986;RSQ=0.9322;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27978176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27978279 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27978387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2782;AVGPOST=0.9955;RSQ=0.9918;ERATE=0.0007;THETA=0.0004;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 27978444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0209;AVGPOST=0.9994;RSQ=0.9859;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27978554 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5918;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27978571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8591;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27978739 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6098;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27978828 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9622;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27978847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1501;AVGPOST=0.9977;RSQ=0.9923;ERATE=0.0006;THETA=0.0032;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 27978866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8164;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27978905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5805;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27978924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.9150;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27978927 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27979201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 27979227 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9612;ERATE=0.0002;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27979228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27979278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5869;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27979432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5794;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27979512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0873;AVGPOST=0.9956;RSQ=0.9783;ERATE=0.0005;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 27979745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27979829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0125;AVGPOST=0.9984;RSQ=0.9559;ERATE=0.0002;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 27979848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9108;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27979897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9227;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27979967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3925;AVGPOST=0.9957;RSQ=0.9928;ERATE=0.0004;THETA=0.0004;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 27980006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0559;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0002;THETA=0.0005;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 27980060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0306;AVGPOST=0.9990;RSQ=0.9865;ERATE=0.0004;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 27980107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6386;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27980255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7536;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27980471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0324;AVGPOST=0.9991;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 27980504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27980889 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27980942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9740;AVGPOST=0.9991;RSQ=0.9862;ERATE=0.0004;THETA=0.0008;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 27980966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7582;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27981009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27981054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8232;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27981090 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27981103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27981395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0711;AVGPOST=0.9993;RSQ=0.9955;ERATE=0.0003;THETA=0.0011;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 27981408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4205;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27981422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27981610 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27981623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27981672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5775;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27981686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0622;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 27981763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27981868 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9453;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27981922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8839;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27981942 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27981951 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9604;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27982029 . C CA 10 PASS INDEL;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6596;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27982180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27982258 . C CT 80 PASS INDEL;BAVGPOST=0.997;BRSQ=0.628;LDAF=0.0094;AVGPOST=0.9870;RSQ=0.4234;ERATE=0.0026;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27982404 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8780;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27982425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6774;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27982426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9616;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27982660 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9995;RSQ=0.0596;ERATE=0.0003;THETA=0.0009;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 27982679 . G GA 122 PASS INDEL;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6266;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27982775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4467;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27982831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27982895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4382;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27982911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27983000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27983018 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27983202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0141;AVGPOST=0.9995;RSQ=0.9872;ERATE=0.0003;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27983205 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27983310 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7678;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0004;THETA=0.0009;AC=1676;AN=2184 GT:DS:GL:BD 0.76739925 1
1 27983344 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.5664;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27983585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0578;AVGPOST=0.9991;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 27983606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.668;LDAF=0.0108;AVGPOST=0.9927;RSQ=0.7317;ERATE=0.0010;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27983742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27983858 . T TG 444 PASS INDEL;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0121;AVGPOST=0.9934;RSQ=0.7871;ERATE=0.0007;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27983861 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3514;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27983890 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0261;AVGPOST=0.9985;RSQ=0.9751;ERATE=0.0005;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 27983903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.920;LDAF=0.9581;AVGPOST=0.9868;RSQ=0.8774;ERATE=0.0019;THETA=0.0006;AC=2102;AN=2184 GT:DS:GL:BD 0.96245420 1
1 27983916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.7909;AVGPOST=0.9953;RSQ=0.9893;ERATE=0.0007;THETA=0.0009;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 27983942 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27983969 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9974;RSQ=0.7548;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27984062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9865;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27984134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9919;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 27984269 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27984347 . T TA 654 PASS INDEL;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9101;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27984427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4598;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27984496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0253;AVGPOST=0.9979;RSQ=0.9728;ERATE=0.0004;THETA=0.0013;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 27984550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4253;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27984552 . A AT 65 PASS INDEL;BAVGPOST=0.997;BRSQ=0.556;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4028;ERATE=0.0012;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27984562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7399;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27984566 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0070;AVGPOST=0.9991;RSQ=0.9423;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27984574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6579;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27984628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7912;AVGPOST=0.9970;RSQ=0.9925;ERATE=0.0007;THETA=0.0008;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 27984657 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0026;AVGPOST=0.9955;RSQ=0.4261;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27984659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0243;AVGPOST=0.9994;RSQ=0.9883;ERATE=0.0003;THETA=0.0011;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 27984702 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0624;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0004;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 27984772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27984810 . CTT C 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27984817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0087;AVGPOST=0.9985;RSQ=0.9305;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 27984859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4936;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27984931 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7813;ERATE=0.0005;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27985100 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27985132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9655;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0007;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 27985164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8289;ERATE=0.0006;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27985180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6013;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27985221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6514;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27985238 . TAGTGCGAGAAA T 586 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3717;ERATE=0.0006;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27985271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7898;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27985499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27985534 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6115;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27985614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0107;AVGPOST=0.9970;RSQ=0.8729;ERATE=0.0006;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27985847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.831;LDAF=0.7164;AVGPOST=0.8792;RSQ=0.7732;ERATE=0.0366;THETA=0.0008;AC=1626;AN=2184 GT:DS:GL:BD 0.74450547 1
1 27985910 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0615;AVGPOST=0.9979;RSQ=0.9870;ERATE=0.0004;THETA=0.0009;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 27985962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.728;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7470;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27986060 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9482;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27986177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.7228;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27986215 . C CT 52 PASS INDEL;BAVGPOST=0.990;BRSQ=0.616;LDAF=0.0267;AVGPOST=0.9699;RSQ=0.5543;ERATE=0.0068;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 27986227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1074;AVGPOST=0.9966;RSQ=0.9879;ERATE=0.0004;THETA=0.0004;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 27986236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27986238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27986251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0648;AVGPOST=0.9974;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 27986317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0437;AVGPOST=0.9991;RSQ=0.9900;ERATE=0.0003;THETA=0.0010;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 27986356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.936;LDAF=0.0745;AVGPOST=0.9944;RSQ=0.9660;ERATE=0.0006;THETA=0.0005;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 27986691 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.660;LDAF=0.0127;AVGPOST=0.9887;RSQ=0.6535;ERATE=0.0006;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27986778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1097;AVGPOST=0.9979;RSQ=0.9913;ERATE=0.0004;THETA=0.0006;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 27986785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.292;LDAF=0.1232;AVGPOST=0.8275;RSQ=0.3609;ERATE=0.0169;THETA=0.0002;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 27986820 . ATATATATATATATG A 1142 PASS INDEL;BAVGPOST=0.925;BRSQ=0.201;LDAF=0.0925;AVGPOST=0.9054;RSQ=0.5500;ERATE=0.0062;THETA=0.0007;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 27986847 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3388;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27987033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0160;AVGPOST=0.9985;RSQ=0.9658;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 27987352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9028;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27987394 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1742;AVGPOST=0.9978;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 27987423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27987532 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9446;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27987605 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27987679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.683;LDAF=0.0036;AVGPOST=0.9971;RSQ=0.6734;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27987765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7937;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27987796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9042;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27987903 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0031;AVGPOST=0.9957;RSQ=0.3670;ERATE=0.0012;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27987990 rs111417832 A AC 8233 PASS INDEL;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1763;AVGPOST=0.9875;RSQ=0.9648;ERATE=0.0013;THETA=0.0002;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 27988034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7277;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27988067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9217;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27988115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.887;LDAF=0.0128;AVGPOST=0.9953;RSQ=0.8660;ERATE=0.0013;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27988253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27988272 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9172;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27988325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.858;LDAF=0.2681;AVGPOST=0.9236;RSQ=0.8488;ERATE=0.0120;THETA=0.0023;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 27988477 . AC A 10 PASS INDEL;BAVGPOST=0.983;BRSQ=0.050;LDAF=0.0357;AVGPOST=0.9542;RSQ=0.5092;ERATE=0.0018;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 27988517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.357;LDAF=0.0788;AVGPOST=0.9010;RSQ=0.5085;ERATE=0.0033;THETA=0.0023;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 27988705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.123;LDAF=0.0241;AVGPOST=0.9755;RSQ=0.6234;ERATE=0.0009;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 27988735 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.286;LDAF=0.0084;AVGPOST=0.9891;RSQ=0.4499;ERATE=0.0013;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27988799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.706;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5301;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27988873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.956;LDAF=0.0973;AVGPOST=0.9917;RSQ=0.9610;ERATE=0.0009;THETA=0.0010;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 27988904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0945;AVGPOST=0.9950;RSQ=0.9750;ERATE=0.0010;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 27988934 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.940;LDAF=0.5963;AVGPOST=0.9362;RSQ=0.8980;ERATE=0.0120;THETA=0.0005;AC=1314;AN=2184 GT:DS:GL:BD 0.60164833 1
1 27988935 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0947;AVGPOST=0.9963;RSQ=0.9832;ERATE=0.0003;THETA=0.0004;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 27989039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.658;LDAF=0.0038;AVGPOST=0.9953;RSQ=0.4913;ERATE=0.0009;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27989072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0070;AVGPOST=0.9958;RSQ=0.7488;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27989085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1210;AVGPOST=0.9964;RSQ=0.9867;ERATE=0.0004;THETA=0.0008;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 27989103 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7137;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27989109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0141;AVGPOST=0.9974;RSQ=0.9341;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 27989146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1134;AVGPOST=0.9975;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 27989171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0055;AVGPOST=0.9980;RSQ=0.8667;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27989214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6208;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27989283 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9953;AVGPOST=0.9996;RSQ=0.9584;ERATE=0.0003;THETA=0.0004;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 27989458 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8386;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27989667 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9496;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27989835 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0273;AVGPOST=0.9975;RSQ=0.9700;ERATE=0.0003;THETA=0.0029;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 27989841 . CTG C 911 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9309;ERATE=0.0005;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 27989925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6607;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27990019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27990040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27990067 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27990079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0198;AVGPOST=0.9986;RSQ=0.9707;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 27990140 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0123;AVGPOST=0.9966;RSQ=0.8856;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 27990159 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27990205 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2732;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 27990383 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2725;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 27990607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27990703 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0536;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 27990937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8769;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27990970 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27991017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6288;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27991295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6656;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27991316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7843;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27991478 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1986;AVGPOST=0.9973;RSQ=0.9934;ERATE=0.0003;THETA=0.0010;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 27991506 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6809;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27991512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27991531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9209;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27991598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0498;AVGPOST=0.9991;RSQ=0.9924;ERATE=0.0003;THETA=0.0011;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 27991687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9045;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27991738 . AAG A 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0053;AVGPOST=0.9958;RSQ=0.6951;ERATE=0.0008;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 27991809 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7643;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27991862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0495;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 27991885 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6997;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27992024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5745;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27992046 . C CA 839 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0295;AVGPOST=0.9985;RSQ=0.9760;ERATE=0.0006;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 27992125 rs59271699 CAAAACA C 9773 PASS INDEL;BAVGPOST=0.965;BRSQ=0.854;LDAF=0.1463;AVGPOST=0.9392;RSQ=0.8211;ERATE=0.0141;THETA=0.0005;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 27992157 . A AAACAT 2482 PASS INDEL;BAVGPOST=0.982;BRSQ=0.793;LDAF=0.0354;AVGPOST=0.9803;RSQ=0.7950;ERATE=0.0014;THETA=0.0010;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 27992164 . G GA 223 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8637;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27992201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7782;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27992224 . T TA 106 PASS INDEL;BAVGPOST=0.987;BRSQ=0.561;LDAF=0.0272;AVGPOST=0.9667;RSQ=0.5062;ERATE=0.0086;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 27992363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9623;ERATE=0.0004;THETA=0.0023;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27992470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0288;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0013;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 27992516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5797;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27992622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.797;LDAF=0.0150;AVGPOST=0.9921;RSQ=0.8210;ERATE=0.0002;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27992636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5908;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27992644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7529;ERATE=0.0003;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27992650 . C CT 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3794;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27992697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27992709 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9275;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27992766 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9629;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27992887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9979;ERATE=0.0002;THETA=0.0015;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27992899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0002;THETA=0.0014;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 27992923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0002;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 27992987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.446;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3665;ERATE=0.0009;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27993035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4581;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27993091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.3322;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27993242 . G GT 371 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7617;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27993254 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7303;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27993362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0975;AVGPOST=0.9990;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 27993428 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2224;AVGPOST=0.9971;RSQ=0.9942;ERATE=0.0004;THETA=0.0006;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 27993474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7851;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27993622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5663;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27993789 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.7013;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27993790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27993975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7784;ERATE=0.0002;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27994014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0057;AVGPOST=0.9973;RSQ=0.8189;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27994049 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27994065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27994104 . CCCTTT C 4112 PASS INDEL;BAVGPOST=0.986;BRSQ=0.752;LDAF=0.0317;AVGPOST=0.9797;RSQ=0.7778;ERATE=0.0007;THETA=0.0021;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 27994319 . CT C 277 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3887;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27994341 . TTTCCC T 560 PASS INDEL;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0168;AVGPOST=0.9900;RSQ=0.7641;ERATE=0.0008;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 27994437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.925;LDAF=0.0475;AVGPOST=0.9967;RSQ=0.9733;ERATE=0.0003;THETA=0.0010;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 27994580 . T TC 100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5649;ERATE=0.0008;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27994597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27994630 . C CCTTTG 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4815;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27994702 . TCTTTCCTTTCCA T 8407 PASS INDEL;BAVGPOST=0.994;BRSQ=0.918;LDAF=0.0351;AVGPOST=0.9986;RSQ=0.9867;ERATE=0.0002;THETA=0.0010;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 27994719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0495;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0007;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 27994738 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27994864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7193;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27994919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6927;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27995243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7945;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27995263 . G GT 55 PASS INDEL;BAVGPOST=0.988;BRSQ=0.520;LDAF=0.0255;AVGPOST=0.9715;RSQ=0.5459;ERATE=0.0072;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 27995366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6244;ERATE=0.0012;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27995426 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9992;RSQ=0.9565;ERATE=0.0003;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27995497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6590;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27995543 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6483;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27995568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2201;AVGPOST=0.9958;RSQ=0.9910;ERATE=0.0006;THETA=0.0014;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 27995578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0185;AVGPOST=0.9914;RSQ=0.8303;ERATE=0.0006;THETA=0.0041;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 27995617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0389;AVGPOST=0.9939;RSQ=0.9381;ERATE=0.0007;THETA=0.0010;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 27995626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0323;AVGPOST=0.9853;RSQ=0.8184;ERATE=0.0015;THETA=0.0030;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 27995668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0109;AVGPOST=0.9921;RSQ=0.6932;ERATE=0.0007;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 27995711 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.865;LDAF=0.0375;AVGPOST=0.9899;RSQ=0.8903;ERATE=0.0009;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 27995805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.623;LDAF=0.0565;AVGPOST=0.9481;RSQ=0.6418;ERATE=0.0033;THETA=0.0015;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 27995837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.533;LDAF=0.0253;AVGPOST=0.9831;RSQ=0.7504;ERATE=0.0008;THETA=0.0014;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 27995845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0045;AVGPOST=0.9971;RSQ=0.7695;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27995927 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27996086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27996149 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0363;AVGPOST=0.9984;RSQ=0.9851;ERATE=0.0003;THETA=0.0023;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 27996180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27996254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27996378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.965;LDAF=0.0918;AVGPOST=0.9957;RSQ=0.9798;ERATE=0.0004;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 27996419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8453;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27996610 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6799;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27996665 rs11288544 GA G 2428 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0367;AVGPOST=0.9927;RSQ=0.9317;ERATE=0.0010;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 27996820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27996831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5263;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27996961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0284;AVGPOST=0.9997;RSQ=0.9956;ERATE=0.0003;THETA=0.0022;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 27996969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 27996972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1299;AVGPOST=0.9984;RSQ=0.9943;ERATE=0.0004;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 27996987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1376;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 27997262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7120;ERATE=0.0010;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27997269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27997362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27997506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0043;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 27997553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1520;AVGPOST=0.9949;RSQ=0.9831;ERATE=0.0004;THETA=0.0003;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 27997690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5868;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27997691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9602;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 27997749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5488;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27997771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2283;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 27997783 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0062;AVGPOST=0.9990;RSQ=0.9296;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 27997792 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5752;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27997795 . C CT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4765;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27997800 . TTTA T 75 PASS INDEL;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7403;ERATE=0.0004;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27997944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6313;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27997981 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.4853;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27997988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.601;LDAF=0.0053;AVGPOST=0.9947;RSQ=0.5776;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27998000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.408;LDAF=0.0103;AVGPOST=0.9857;RSQ=0.4388;ERATE=0.0009;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27998082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.620;LDAF=0.0044;AVGPOST=0.9960;RSQ=0.6345;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 27998108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.838;LDAF=0.0146;AVGPOST=0.9949;RSQ=0.8742;ERATE=0.0006;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 27998283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0374;AVGPOST=0.9965;RSQ=0.9632;ERATE=0.0005;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 27998344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0033;AVGPOST=0.9969;RSQ=0.6574;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 27998441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4267;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27998543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9886;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 27998733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7699;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27998768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0795;AVGPOST=0.9986;RSQ=0.9917;ERATE=0.0004;THETA=0.0007;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 27998787 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27998798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7971;ERATE=0.0005;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27998813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27998873 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5281;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27998934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2269;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0007;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 27998943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 27998970 . TCATGGGTTG T 199 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6856;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 27999028 . T TG 583 PASS INDEL;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.9117;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 27999061 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27999176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9706;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27999209 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27999235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27999243 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9638;ERATE=0.0005;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 27999245 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27999296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 27999324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9997;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27999386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6813;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27999427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 27999469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8839;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27999481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7216;ERATE=0.0009;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 27999492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0039;AVGPOST=0.9977;RSQ=0.7700;ERATE=0.0011;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 27999536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9431;ERATE=0.0007;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 27999691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 27999753 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0374;AVGPOST=0.9987;RSQ=0.9861;ERATE=0.0005;THETA=0.0021;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 27999817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2519;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 27999901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9778;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28000021 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5168;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28000063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0083;AVGPOST=0.9968;RSQ=0.8538;ERATE=0.0008;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28000134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6738;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28000227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0098;AVGPOST=0.9982;RSQ=0.9372;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28000260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8451;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28000271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9782;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28000325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28000552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6254;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28000675 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0183;AVGPOST=0.9987;RSQ=0.9688;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 28000693 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3214;AVGPOST=0.9889;RSQ=0.9802;ERATE=0.0006;THETA=0.0006;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 28000740 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5110;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28000745 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28000812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9964;RSQ=0.7906;ERATE=0.0006;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28000901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.938;LDAF=0.2477;AVGPOST=0.9872;RSQ=0.9752;ERATE=0.0006;THETA=0.0003;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 28000907 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0062;AVGPOST=0.9964;RSQ=0.7538;ERATE=0.0007;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28000923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.831;LDAF=0.2303;AVGPOST=0.9532;RSQ=0.9077;ERATE=0.0051;THETA=0.0003;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 28000930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.658;LDAF=0.0230;AVGPOST=0.9961;RSQ=0.9343;ERATE=0.0005;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 28000936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0048;AVGPOST=0.9943;RSQ=0.5447;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28000950 . CA C 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.7602;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28000956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8187;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28000988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5400;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28001051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0046;AVGPOST=0.9975;RSQ=0.7891;ERATE=0.0007;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28001111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8960;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28001117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5529;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28001124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28001356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28001375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4559;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28001532 . CAAT C 48 PASS INDEL;BAVGPOST=0.994;BRSQ=0.609;LDAF=0.0133;AVGPOST=0.9844;RSQ=0.5425;ERATE=0.0046;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28001642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28001719 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2717;AVGPOST=0.9970;RSQ=0.9938;ERATE=0.0005;THETA=0.0004;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 28001879 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28002092 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.8013;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28002124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6040;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28002243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2845;AVGPOST=0.9956;RSQ=0.9915;ERATE=0.0004;THETA=0.0005;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 28002300 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7447;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=1626;AN=2184 GT:DS:GL:BD 0.74450547 1
1 28002340 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9187;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28002401 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7646;AVGPOST=0.9962;RSQ=0.9918;ERATE=0.0005;THETA=0.0004;AC=1672;AN=2184 GT:DS:GL:BD 0.76556778 1
1 28002403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1564;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 28002496 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5630;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28002520 . AAT A 387 PASS INDEL;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0045;AVGPOST=0.9964;RSQ=0.7325;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28002521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28002689 . ATT A 130 PASS INDEL;BAVGPOST=0.942;BRSQ=0.456;LDAF=0.0676;AVGPOST=0.9475;RSQ=0.7165;ERATE=0.0010;THETA=0.0003;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 28002816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0450;AVGPOST=0.9959;RSQ=0.9607;ERATE=0.0006;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 28002833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0443;AVGPOST=0.9972;RSQ=0.9737;ERATE=0.0005;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 28002857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28003021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28003042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9591;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28003057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4934;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28003093 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9512;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28003113 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0034;AVGPOST=0.9944;RSQ=0.4048;ERATE=0.0008;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28003225 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28003406 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9776;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28003413 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9384;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28003430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9818;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28003537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5620;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28003710 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9982;RSQ=0.3285;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28003726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28003793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0840;AVGPOST=0.9990;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 28003990 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9737;ERATE=0.0003;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28004225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28004307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7882;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28004310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0002;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28004324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0136;AVGPOST=0.9970;RSQ=0.9165;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 28004612 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28004751 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0008;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 28004765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9241;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28004776 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28004825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4908;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28004862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28004959 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8145;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28005193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2968;AVGPOST=0.9968;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 28005194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7791;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28005214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28005268 rs10647406 GGCTT G 1322 PASS INDEL;BAVGPOST=0.988;BRSQ=0.896;LDAF=0.0621;AVGPOST=0.9857;RSQ=0.9142;ERATE=0.0006;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 28005326 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.918;LDAF=0.0830;AVGPOST=0.9954;RSQ=0.9764;ERATE=0.0003;THETA=0.0004;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 28005330 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.919;LDAF=0.0828;AVGPOST=0.9945;RSQ=0.9718;ERATE=0.0004;THETA=0.0028;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 28005334 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.710;LDAF=0.0912;AVGPOST=0.9210;RSQ=0.6229;ERATE=0.0250;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 28005343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.952;LDAF=0.1537;AVGPOST=0.9686;RSQ=0.9091;ERATE=0.0082;THETA=0.0006;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 28005414 . T TTATGC 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4721;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28005448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0115;AVGPOST=0.9988;RSQ=0.9659;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28005475 . C CT 329 PASS INDEL;BAVGPOST=0.990;BRSQ=0.942;LDAF=0.0866;AVGPOST=0.9980;RSQ=0.9894;ERATE=0.0004;THETA=0.0003;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 28005494 rs76102423 T TA 7545 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0869;AVGPOST=0.9986;RSQ=0.9923;ERATE=0.0004;THETA=0.0005;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 28005496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8870;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28005574 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5355;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28005582 . AACT A 759 PASS INDEL;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0068;AVGPOST=0.9977;RSQ=0.8612;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28005659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28005660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28005747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28005895 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9566;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28005984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0868;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 28006008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.872;LDAF=0.0124;AVGPOST=0.9985;RSQ=0.9457;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 28006043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28006048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28006090 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7275;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28006141 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28006207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0078;AVGPOST=0.9989;RSQ=0.9474;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28006276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28006277 . A AT 11 PASS INDEL;BAVGPOST=0.997;BRSQ=0.603;LDAF=0.0040;AVGPOST=0.9950;RSQ=0.5050;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28006335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0430;AVGPOST=0.9984;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 28006343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6099;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28006443 rs71793938 A AG 6495 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0410;AVGPOST=0.9986;RSQ=0.9875;ERATE=0.0005;THETA=0.0007;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 28006547 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28006604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28006653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28006656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9225;AVGPOST=0.9987;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=2015;AN=2184 GT:DS:GL:BD 0.92261904 1
1 28006717 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7825;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28006848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 28006858 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28006907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4922;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28006926 . A AACTTT 72 PASS INDEL;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5241;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28006992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28007140 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7442;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28007227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0140;AVGPOST=0.9992;RSQ=0.9752;ERATE=0.0003;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 28007319 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7263;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28007332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28007342 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6860;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28007362 . GC G 7501 PASS INDEL;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0626;AVGPOST=0.9972;RSQ=0.9814;ERATE=0.0004;THETA=0.0012;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 28007368 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28007410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28007443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0243;AVGPOST=0.9984;RSQ=0.9785;ERATE=0.0003;THETA=0.0029;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28007570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9867;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28007578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28007621 . A AT 1212 PASS INDEL;BAVGPOST=0.969;BRSQ=0.584;LDAF=0.0529;AVGPOST=0.9452;RSQ=0.5662;ERATE=0.0125;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 28007646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28007699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8175;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28007756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8980;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28007786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.810;LDAF=0.0069;AVGPOST=0.9969;RSQ=0.8122;ERATE=0.0006;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28007787 . TCTC T 337 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9970;RSQ=0.7768;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28007830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7028;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28007967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8913;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28008008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0265;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 28008110 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28008180 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28008187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0279;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 28008212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 28008274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7355;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28008318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0191;AVGPOST=0.9970;RSQ=0.9403;ERATE=0.0003;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 28008470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28008485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0578;AVGPOST=0.9967;RSQ=0.9761;ERATE=0.0003;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 28008510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.8865;AVGPOST=0.9977;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=1937;AN=2184 GT:DS:GL:BD 0.88690478 1
1 28008594 . GC G 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5068;ERATE=0.0005;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28008606 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9078;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28008620 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.758;LDAF=0.0144;AVGPOST=0.9965;RSQ=0.8989;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28008673 . TA T 109 PASS INDEL;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5415;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28008691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9730;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28008749 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5750;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28008777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5816;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28008834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 28008946 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.852;LDAF=0.0242;AVGPOST=0.9872;RSQ=0.7988;ERATE=0.0030;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 28008972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9081;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0010;AC=1984;AN=2184 GT:DS:GL:BD 0.90842491 1
1 28009265 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28009315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0105;AVGPOST=0.9984;RSQ=0.9423;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28009396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7798;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28009521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3651;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28009568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7156;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28009658 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.3591;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28009691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28009724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.3614;ERATE=0.0010;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28009805 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8801;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28010055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0003;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 28010146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0109;AVGPOST=0.9993;RSQ=0.9725;ERATE=0.0005;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 28010182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6792;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28010291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9119;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28010497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28010527 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7307;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28010567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28010622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.760;LDAF=0.0191;AVGPOST=0.9901;RSQ=0.7730;ERATE=0.0006;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 28010633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9728;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28010643 rs67191244 AT A 4496 PASS INDEL;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0339;AVGPOST=0.9985;RSQ=0.9821;ERATE=0.0004;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 28010766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0336;AVGPOST=0.9993;RSQ=0.9907;ERATE=0.0004;THETA=0.0009;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 28010884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28010998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28011027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6971;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28011063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6162;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28011096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0115;AVGPOST=0.9991;RSQ=0.9686;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28011126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0109;AVGPOST=0.9935;RSQ=0.7991;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28011187 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8513;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28011302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7921;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28011307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4765;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28011319 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4787;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28011326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6115;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28011353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0268;AVGPOST=0.9990;RSQ=0.9843;ERATE=0.0005;THETA=0.0013;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 28011377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.851;LDAF=0.0080;AVGPOST=0.9984;RSQ=0.9224;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28011486 . A AT 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5167;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28011503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28011552 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6500;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28011578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0858;AVGPOST=0.9991;RSQ=0.9953;ERATE=0.0004;THETA=0.0006;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 28011615 . A AT 1045 PASS INDEL;BAVGPOST=0.987;BRSQ=0.934;LDAF=0.0879;AVGPOST=0.9956;RSQ=0.9791;ERATE=0.0008;THETA=0.0009;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 28011687 . CT C 428 PASS INDEL;BAVGPOST=0.997;BRSQ=0.805;LDAF=0.0087;AVGPOST=0.9931;RSQ=0.7035;ERATE=0.0027;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28011696 . CATCT C 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28011736 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0859;AVGPOST=0.9990;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 28011751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0056;AVGPOST=0.9985;RSQ=0.9001;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28011767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6638;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28011775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0858;AVGPOST=0.9984;RSQ=0.9924;ERATE=0.0004;THETA=0.0005;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 28011824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0859;AVGPOST=0.9982;RSQ=0.9918;ERATE=0.0003;THETA=0.0014;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 28011853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28011855 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28011871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28011873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28011888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0204;AVGPOST=0.9962;RSQ=0.9261;ERATE=0.0007;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 28011969 . AGATG A 631 PASS INDEL;BAVGPOST=0.944;BRSQ=0.656;LDAF=0.0961;AVGPOST=0.9261;RSQ=0.6740;ERATE=0.0161;THETA=0.0023;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 28011978 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.891;LDAF=0.2961;AVGPOST=0.9292;RSQ=0.8579;ERATE=0.0183;THETA=0.0005;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 28012011 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.776;LDAF=0.1567;AVGPOST=0.9026;RSQ=0.7095;ERATE=0.0407;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 28012023 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28012136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.1329;ERATE=0.0004;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28012332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8223;ERATE=0.0004;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28012355 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7504;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28012426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7517;ERATE=0.0005;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28012455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7320;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28012484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28012499 . T TA 1100 PASS INDEL;BAVGPOST=0.959;BRSQ=0.508;LDAF=0.0569;AVGPOST=0.9616;RSQ=0.7424;ERATE=0.0010;THETA=0.0012;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 28012541 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.492;LDAF=0.0111;AVGPOST=0.9833;RSQ=0.4387;ERATE=0.0023;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28012548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0098;AVGPOST=0.9949;RSQ=0.7911;ERATE=0.0006;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28012586 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0033;AVGPOST=0.9947;RSQ=0.3158;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28012635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4480;AVGPOST=0.9726;RSQ=0.9566;ERATE=0.0034;THETA=0.0006;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 28012677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.570;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.7882;ERATE=0.0006;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28012683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.901;LDAF=0.0803;AVGPOST=0.9894;RSQ=0.9529;ERATE=0.0008;THETA=0.0059;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 28012707 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5086;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28012708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.916;LDAF=0.0800;AVGPOST=0.9911;RSQ=0.9630;ERATE=0.0003;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 28012713 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0941;AVGPOST=0.9979;RSQ=0.9891;ERATE=0.0004;THETA=0.0003;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 28012735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28012753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0943;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0004;THETA=0.0002;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 28012816 . C CT 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4707;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28012867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28012979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8098;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28013010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4430;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28013044 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.959;LDAF=0.0855;AVGPOST=0.9967;RSQ=0.9837;ERATE=0.0004;THETA=0.0014;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 28013057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0860;AVGPOST=0.9983;RSQ=0.9916;ERATE=0.0004;THETA=0.0005;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 28013070 . CT C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0042;AVGPOST=0.9944;RSQ=0.4487;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28013082 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0443;AVGPOST=0.9977;RSQ=0.9789;ERATE=0.0004;THETA=0.0018;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 28013168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0945;AVGPOST=0.9982;RSQ=0.9903;ERATE=0.0005;THETA=0.0003;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 28013225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5605;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28013242 rs75076834 GA G 5464 PASS INDEL;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0971;AVGPOST=0.9868;RSQ=0.9409;ERATE=0.0017;THETA=0.0003;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 28013316 . AG A 248 PASS INDEL;BAVGPOST=0.998;BRSQ=0.581;LDAF=0.0038;AVGPOST=0.9948;RSQ=0.4434;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28013349 . C CT 36 PASS INDEL;BAVGPOST=0.998;BRSQ=0.492;LDAF=0.0034;AVGPOST=0.9952;RSQ=0.4509;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28013360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7214;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28013411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8348;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28013434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8291;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28013456 . CTTAA C 180 PASS INDEL;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5548;ERATE=0.0009;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28013465 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3608;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28013488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5758;AVGPOST=0.9938;RSQ=0.9901;ERATE=0.0006;THETA=0.0052;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 28013511 rs34903885 C CA 32533 PASS INDEL;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.4465;AVGPOST=0.9870;RSQ=0.9780;ERATE=0.0019;THETA=0.0005;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 28013586 . A AT 774 PASS INDEL;BAVGPOST=0.895;BRSQ=0.759;LDAF=0.2311;AVGPOST=0.8891;RSQ=0.7962;ERATE=0.0006;THETA=0.0002;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 28013588 . A AC 497 PASS INDEL;BAVGPOST=0.896;BRSQ=0.762;LDAF=0.2351;AVGPOST=0.8884;RSQ=0.7977;ERATE=0.0007;THETA=0.0002;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 28013590 . A AG 520 PASS INDEL;BAVGPOST=0.896;BRSQ=0.762;LDAF=0.2334;AVGPOST=0.8866;RSQ=0.7949;ERATE=0.0005;THETA=0.0011;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 28013592 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28013614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28013637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6188;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28013792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7397;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28013806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6983;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28013815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4581;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28013898 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28013928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28013989 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8505;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28014011 . AT A 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28014041 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5070;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28014078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0858;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 28014138 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4006;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28014205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0858;AVGPOST=0.9991;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 28014306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9471;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28014323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6213;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28014409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5321;AVGPOST=0.9955;RSQ=0.9927;ERATE=0.0005;THETA=0.0016;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 28014499 . A ACT 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4917;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28014573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6270;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28014582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6254;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28014583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.598;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.5777;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28014661 . TTTA T 6455 PASS INDEL;BAVGPOST=0.969;BRSQ=0.904;LDAF=0.1740;AVGPOST=0.9782;RSQ=0.9451;ERATE=0.0007;THETA=0.0005;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 28014663 . TTA T 10214 PASS INDEL;BAVGPOST=0.967;BRSQ=0.902;LDAF=0.1761;AVGPOST=0.9762;RSQ=0.9405;ERATE=0.0017;THETA=0.0002;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 28014664 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.872;LDAF=0.4154;AVGPOST=0.9108;RSQ=0.8496;ERATE=0.0206;THETA=0.0003;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 28014674 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0850;AVGPOST=0.9956;RSQ=0.9776;ERATE=0.0005;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 28014708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.597;LDAF=0.0059;AVGPOST=0.9927;RSQ=0.4976;ERATE=0.0008;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28014788 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4463;AVGPOST=0.9922;RSQ=0.9874;ERATE=0.0010;THETA=0.0006;AC=975;AN=2184 GT:DS:GL:BD 0.44642857 0
1 28014876 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0874;AVGPOST=0.9948;RSQ=0.9783;ERATE=0.0005;THETA=0.0004;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 28014920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8124;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28014944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.895;BRSQ=0.815;LDAF=0.4551;AVGPOST=0.8950;RSQ=0.8498;ERATE=0.0103;THETA=0.0006;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 28014984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.953;LDAF=0.6870;AVGPOST=0.9595;RSQ=0.9278;ERATE=0.0154;THETA=0.0007;AC=1520;AN=2184 GT:DS:GL:BD 0.69597071 1
1 28015070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.529;LDAF=0.9931;AVGPOST=0.9958;RSQ=0.7289;ERATE=0.0010;THETA=0.0006;AC=2172;AN=2184 GT:DS:GL:BD 0.99450547 1
1 28015082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0449;AVGPOST=0.9936;RSQ=0.9461;ERATE=0.0006;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 28015090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.902;LDAF=0.6632;AVGPOST=0.9094;RSQ=0.8570;ERATE=0.0097;THETA=0.0006;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 28015105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.925;LDAF=0.0830;AVGPOST=0.9926;RSQ=0.9667;ERATE=0.0005;THETA=0.0004;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 28015494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3066;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28015846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.4453;AVGPOST=0.9926;RSQ=0.9877;ERATE=0.0009;THETA=0.0003;AC=975;AN=2184 GT:DS:GL:BD 0.44642857 0
1 28015861 rs36061949 TC T 10598 PASS INDEL;BAVGPOST=0.792;BRSQ=0.686;LDAF=0.5325;AVGPOST=0.7454;RSQ=0.6558;ERATE=0.0359;THETA=0.0003;AC=1265;AN=2184 GT:DS:GL:BD 0.57921243 1
1 28015949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.830;LDAF=0.0645;AVGPOST=0.9684;RSQ=0.8296;ERATE=0.0008;THETA=0.0002;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 28015988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.327;LDAF=0.0061;AVGPOST=0.9931;RSQ=0.5676;ERATE=0.0008;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28015991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.957;LDAF=0.0883;AVGPOST=0.9887;RSQ=0.9510;ERATE=0.0043;THETA=0.0009;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 28016113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28016152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5086;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28016163 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28016164 . CCAAA C 793 PASS INDEL;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0061;AVGPOST=0.9991;RSQ=0.9309;ERATE=0.0005;THETA=0.0024;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28016182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0975;AVGPOST=0.9953;RSQ=0.9808;ERATE=0.0005;THETA=0.0003;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 28016184 . GC G 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4978;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28016223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0077;AVGPOST=0.9978;RSQ=0.8929;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28016243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7044;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28016290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.8117;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28016328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28016458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4459;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 28016476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.531;LDAF=0.0033;AVGPOST=0.9954;RSQ=0.4241;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28016554 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6219;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28016728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.9910;AVGPOST=0.9976;RSQ=0.9037;ERATE=0.0004;THETA=0.0005;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 28016797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7826;AVGPOST=0.9963;RSQ=0.9911;ERATE=0.0007;THETA=0.0004;AC=1709;AN=2184 GT:DS:GL:BD 0.78250915 1
1 28016802 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0293;AVGPOST=0.9989;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 28016805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28016825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.749;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8005;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28016934 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0271;AVGPOST=0.9988;RSQ=0.9805;ERATE=0.0005;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 28016983 . GA G 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4306;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28017006 . A AT 37 PASS INDEL;BAVGPOST=0.998;BRSQ=0.341;LDAF=0.0122;AVGPOST=0.9862;RSQ=0.5672;ERATE=0.0009;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28017007 . CTAAA C 172 PASS INDEL;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6650;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28017056 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0291;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 28017113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5770;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28017150 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4434;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28017151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28017179 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3798;AVGPOST=0.9962;RSQ=0.9940;ERATE=0.0006;THETA=0.0006;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 28017190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6439;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28017215 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0189;AVGPOST=0.9988;RSQ=0.9756;ERATE=0.0003;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 28017244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2968;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0006;THETA=0.0004;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 28017293 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4651;ERATE=0.0005;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28017344 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7919;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28017350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5568;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28017359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4279;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28017412 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0276;AVGPOST=0.9994;RSQ=0.9894;ERATE=0.0004;THETA=0.0035;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 28017425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7493;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28017582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3090;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 28017594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0373;AVGPOST=0.9977;RSQ=0.9738;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 28017662 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9316;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28017837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0084;AVGPOST=0.9980;RSQ=0.9185;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28017845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7230;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28017868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8842;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28017901 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8589;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28017955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7055;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28018020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5379;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28018033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28018170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3790;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 28018248 . A AT 1117 PASS INDEL;BAVGPOST=0.946;BRSQ=0.607;LDAF=0.1100;AVGPOST=0.8859;RSQ=0.5230;ERATE=0.0200;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 28018349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0046;AVGPOST=0.9951;RSQ=0.6462;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28018415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28018428 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9789;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28018508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3790;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0006;THETA=0.0004;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 28018542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9884;ERATE=0.0004;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 28018638 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0026;AVGPOST=0.9966;RSQ=0.4813;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28018656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4527;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28018659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8008;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=1748;AN=2184 GT:DS:GL:BD 0.80036628 1
1 28018726 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 28018735 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28018966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3818;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28019136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0285;AVGPOST=0.9989;RSQ=0.9881;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 28019199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9992;RSQ=0.9895;ERATE=0.0004;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 28019202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7108;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28019281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0266;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 28019362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3103;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0004;THETA=0.0005;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 28019411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3504;AVGPOST=0.9972;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 28019417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28019504 . T TATC 289 PASS INDEL;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4646;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28019554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28019615 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5957;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28019695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8361;ERATE=0.0006;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28019753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9060;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28019922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.6232;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28020007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7625;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28020089 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0057;AVGPOST=0.9904;RSQ=0.4145;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28020191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0154;AVGPOST=0.9987;RSQ=0.9618;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28020426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7117;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28020455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.2851;ERATE=0.0008;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28020488 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0157;AVGPOST=0.9939;RSQ=0.8718;ERATE=0.0006;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 28020591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8356;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28020642 . TA T 1977 PASS INDEL;BAVGPOST=0.980;BRSQ=0.679;LDAF=0.0252;AVGPOST=0.9895;RSQ=0.8265;ERATE=0.0008;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 28020689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0134;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28020704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0003;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 28020867 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5859;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28020909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28020911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3113;AVGPOST=0.9966;RSQ=0.9932;ERATE=0.0007;THETA=0.0004;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 28020960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5250;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28021327 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4742;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28021404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0288;AVGPOST=0.9972;RSQ=0.9663;ERATE=0.0005;THETA=0.0008;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 28021433 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0266;AVGPOST=0.9993;RSQ=0.9883;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 28021480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8731;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28021493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9239;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28021508 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3798;AVGPOST=0.9948;RSQ=0.9917;ERATE=0.0012;THETA=0.0007;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 28021535 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28021742 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28021769 . TATA T 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28021804 . ATAAT A 494 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0003;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28021805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28021847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28021922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0089;AVGPOST=0.9994;RSQ=0.9721;ERATE=0.0003;THETA=0.0082;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28021944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6944;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28021968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28022200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0053;AVGPOST=0.9973;RSQ=0.8018;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28022250 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0083;AVGPOST=0.9984;RSQ=0.9143;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28022254 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28022265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7429;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28022314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6977;AVGPOST=0.9962;RSQ=0.9922;ERATE=0.0005;THETA=0.0004;AC=1525;AN=2184 GT:DS:GL:BD 0.69826007 1
1 28022326 . CT C 195 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0056;AVGPOST=0.9973;RSQ=0.7907;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28022344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28022374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8348;ERATE=0.0005;THETA=0.0050;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28022567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4697;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28022615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0050;AVGPOST=0.9957;RSQ=0.6488;ERATE=0.0007;THETA=0.0056;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28022682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28022700 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0955;AVGPOST=0.9981;RSQ=0.9903;ERATE=0.0004;THETA=0.0017;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 28022757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8203;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28022792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28022793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28022937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6947;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28023026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8946;ERATE=0.0004;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28023102 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28023128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5744;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28023138 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0042;AVGPOST=0.9987;RSQ=0.8614;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28023186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28023236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7374;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28023273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.8072;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=1764;AN=2184 GT:DS:GL:BD 0.80769229 1
1 28023390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28023392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0967;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 28023443 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28023603 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6563;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28023658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8812;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28023682 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28023734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6894;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0006;AC=1506;AN=2184 GT:DS:GL:BD 0.68956041 1
1 28023749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28023757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8527;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28023764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28023956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28024098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28024177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28024178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5945;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28024203 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28024219 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0981;AVGPOST=0.9990;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 28024270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28024374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0274;AVGPOST=0.9974;RSQ=0.9664;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 28024446 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8066;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0011;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 28024450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9792;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 28024461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9994;RSQ=0.9892;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 28024500 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28024533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5060;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28024555 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28024611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0034;AVGPOST=0.9966;RSQ=0.6027;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28024666 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.477;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28024699 . G GA 191 PASS INDEL;BAVGPOST=0.998;BRSQ=0.702;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.6831;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28024728 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28024781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28024836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28025068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28025083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7875;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28025173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8040;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28025192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4468;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28025193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9551;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28025363 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7315;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28025382 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0238;AVGPOST=0.9985;RSQ=0.9729;ERATE=0.0003;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 28025399 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5514;AVGPOST=0.9956;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=1205;AN=2184 GT:DS:GL:BD 0.55173993 1
1 28025421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6841;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28025693 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1083;AVGPOST=0.9952;RSQ=0.9843;ERATE=0.0004;THETA=0.0006;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 28025773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1319;AVGPOST=0.9968;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 28025795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0060;AVGPOST=0.9962;RSQ=0.7561;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28025806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8796;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28025841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28025974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9357;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28026131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8465;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28026144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28026241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.6305;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28026265 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28026311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9193;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28026345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9225;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28026346 . G GA 308 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9321;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28026474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9580;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28026498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28026561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0955;AVGPOST=0.9983;RSQ=0.9923;ERATE=0.0003;THETA=0.0018;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 28026588 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28026609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28026621 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28026660 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 28026704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28026949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8483;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28026967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6777;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28027016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7540;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28027100 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28027311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28027312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.6318;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28027428 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5313;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28027442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.482;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5369;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28027455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28027500 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1292;AVGPOST=0.9971;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 28027506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28027522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28027594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6416;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28027658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6991;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28027912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8646;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28027919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7174;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28027985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1058;AVGPOST=0.9964;RSQ=0.9856;ERATE=0.0008;THETA=0.0016;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 28028096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1221;AVGPOST=0.9960;RSQ=0.9868;ERATE=0.0006;THETA=0.0006;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 28028214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8772;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28028215 . GTCTA G 135 PASS INDEL;BAVGPOST=0.994;BRSQ=0.654;LDAF=0.0098;AVGPOST=0.9989;RSQ=0.9452;ERATE=0.0005;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28028215 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5839;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28028427 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8904;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28028445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1259;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 28028453 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0097;AVGPOST=0.9995;RSQ=0.9755;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28028516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5062;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28028578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.705;LDAF=0.0071;AVGPOST=0.9926;RSQ=0.5718;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28028604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1244;AVGPOST=0.9977;RSQ=0.9911;ERATE=0.0004;THETA=0.0005;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 28028671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8223;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28028815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9678;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28028816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1264;AVGPOST=0.9954;RSQ=0.9838;ERATE=0.0007;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 28028821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.878;LDAF=0.0141;AVGPOST=0.9974;RSQ=0.9334;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 28028871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28028913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0099;AVGPOST=0.9976;RSQ=0.8963;ERATE=0.0006;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28029280 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28029315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9877;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 28029341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1280;AVGPOST=0.9851;RSQ=0.9544;ERATE=0.0029;THETA=0.0002;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 28029374 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.941;LDAF=0.1507;AVGPOST=0.9937;RSQ=0.9803;ERATE=0.0005;THETA=0.0004;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 28029558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28029593 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9232;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28029717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8812;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28029822 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7304;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28029835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28029881 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6684;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28030041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3188;ERATE=0.0009;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28030298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6268;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28030330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28030599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28030635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.904;LDAF=0.1028;AVGPOST=0.9916;RSQ=0.9656;ERATE=0.0004;THETA=0.0003;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 28030712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.951;LDAF=0.2548;AVGPOST=0.9829;RSQ=0.9679;ERATE=0.0015;THETA=0.0005;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 28030713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0183;AVGPOST=0.9935;RSQ=0.8430;ERATE=0.0008;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 28030721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28030812 . TG T 301 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6633;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28030824 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1265;AVGPOST=0.9974;RSQ=0.9908;ERATE=0.0006;THETA=0.0003;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 28031000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0089;AVGPOST=0.9976;RSQ=0.8928;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28031035 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5694;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28031121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4630;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28031189 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.5101;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28031218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0084;AVGPOST=0.9977;RSQ=0.8905;ERATE=0.0006;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28031425 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.963;LDAF=0.0973;AVGPOST=0.9882;RSQ=0.9508;ERATE=0.0011;THETA=0.0008;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 28031442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2254;AVGPOST=0.9921;RSQ=0.9825;ERATE=0.0007;THETA=0.0004;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 28031502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1285;AVGPOST=0.9923;RSQ=0.9728;ERATE=0.0015;THETA=0.0004;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 28031568 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.911;LDAF=0.8677;AVGPOST=0.9411;RSQ=0.8212;ERATE=0.0082;THETA=0.0002;AC=1933;AN=2184 GT:DS:GL:BD 0.88507324 1
1 28031601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6798;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=1487;AN=2184 GT:DS:GL:BD 0.68086082 1
1 28031753 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0033;AVGPOST=0.9975;RSQ=0.7476;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28031814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28031887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.958;LDAF=0.0780;AVGPOST=0.9970;RSQ=0.9827;ERATE=0.0006;THETA=0.0008;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 28032013 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6205;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28032029 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4223;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28032221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0151;AVGPOST=0.9940;RSQ=0.8441;ERATE=0.0007;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28032236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9017;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28032290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.840;LDAF=0.0125;AVGPOST=0.9974;RSQ=0.9229;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28032404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28032414 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28032515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.766;LDAF=0.0097;AVGPOST=0.9958;RSQ=0.8465;ERATE=0.0009;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28032727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0242;AVGPOST=0.9981;RSQ=0.9656;ERATE=0.0005;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 28032843 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8347;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28032868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7315;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28032926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.8800;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28033009 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28033159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9986;RSQ=0.9418;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28033357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7072;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28033574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7017;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28033630 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28033730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8696;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28033756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0763;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0004;THETA=0.0010;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 28033767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9979;RSQ=0.2831;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28033827 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28034252 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9636;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28034271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28034324 . ATTTTG A 226 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4905;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28034364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28034654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0437;AVGPOST=0.9990;RSQ=0.9895;ERATE=0.0004;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 28034692 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.941;LDAF=0.0456;AVGPOST=0.9936;RSQ=0.9469;ERATE=0.0005;THETA=0.0007;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 28034693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1127;AVGPOST=0.9986;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 28034757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7408;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28034793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0014;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 28034934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28034961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0019;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28034986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0244;AVGPOST=0.9985;RSQ=0.9738;ERATE=0.0004;THETA=0.0015;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28035109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5842;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28035302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28035339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.8078;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28035391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7863;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28035457 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28035548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28035744 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28035764 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28035797 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28035846 . T TG 326 PASS INDEL;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8290;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28035994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2534;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0004;THETA=0.0011;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 28036079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28036297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.6818;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28036417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4878;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28036418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8393;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28036448 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0179;AVGPOST=0.9973;RSQ=0.9448;ERATE=0.0004;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 28036462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0412;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 28036639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0676;AVGPOST=0.9978;RSQ=0.9868;ERATE=0.0005;THETA=0.0009;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 28036834 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28036910 MERGED_DEL_2_4674 C ADELA . . SV;BAVGPOST=0.998;BRSQ=0.512;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4479;ERATE=0.0011;THETA=0.0003;CIEND=-16;34;CIPOS=-25;18;END=110485801;SOURCE=EMBLdelly_110484124_110485800;GenomeStrip_11048412 GT:DS:GL:BD 0.00091575 0
1 28036989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0153;AVGPOST=0.9996;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28037081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1195;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 28037129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2699;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0006;THETA=0.0019;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 28037131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1246;AVGPOST=0.9982;RSQ=0.9937;ERATE=0.0006;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 28037274 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6035;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28037445 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6464;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28037462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8972;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28037560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6589;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28037572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0057;AVGPOST=0.9959;RSQ=0.6998;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28037789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8436;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28037866 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28037915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8078;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28038147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28038193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3088;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 28038242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3082;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0008;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 28038291 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28038441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8761;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28038499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5471;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28038500 . GAGAA G 1050 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28038514 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6017;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28038589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3083;AVGPOST=0.9961;RSQ=0.9936;ERATE=0.0009;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 28038694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28038775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28038786 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28038820 . TATTTA T 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7323;ERATE=0.0007;THETA=0.0080;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28038843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4468;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28038875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0039;AVGPOST=0.9970;RSQ=0.6944;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28039038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28039148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0062;AVGPOST=0.9942;RSQ=0.6206;ERATE=0.0008;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28039354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7875;AVGPOST=0.9973;RSQ=0.9930;ERATE=0.0006;THETA=0.0003;AC=1722;AN=2184 GT:DS:GL:BD 0.78846157 1
1 28039397 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1304;AVGPOST=0.9976;RSQ=0.9925;ERATE=0.0004;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 28039414 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.3050;AVGPOST=0.9911;RSQ=0.9848;ERATE=0.0014;THETA=0.0003;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 28039456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2280;AVGPOST=0.9950;RSQ=0.9893;ERATE=0.0008;THETA=0.0004;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 28039570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1320;AVGPOST=0.9948;RSQ=0.9832;ERATE=0.0014;THETA=0.0003;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 28039581 . AG A 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4321;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28039586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2277;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0006;THETA=0.0003;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 28039704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28039768 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9208;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28039907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4956;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28040286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0165;AVGPOST=0.9986;RSQ=0.9652;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 28040429 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28040450 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0251;AVGPOST=0.9992;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 28040488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3011;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0001;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 28040504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28040564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.9985;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 28040699 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7806;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0029;AC=1706;AN=2184 GT:DS:GL:BD 0.78113556 1
1 28040772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28040801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28040817 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28040830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7397;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28040851 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28040905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28040919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3494;AVGPOST=0.9947;RSQ=0.9896;ERATE=0.0015;THETA=0.0005;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 28040951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28041098 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.5788;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28041140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9111;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28041210 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3015;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 28041223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9983;AVGPOST=0.9992;RSQ=0.7918;ERATE=0.0004;THETA=0.0005;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 28041240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28041357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8530;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28041397 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3016;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0005;THETA=0.0004;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 28041424 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28041444 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28041518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28041743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9639;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28041774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7658;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28041792 rs76653743 TA T 22358 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2291;AVGPOST=0.9959;RSQ=0.9910;ERATE=0.0009;THETA=0.0002;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 28041827 . AG A 31460 PASS INDEL;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3004;AVGPOST=0.9935;RSQ=0.9884;ERATE=0.0021;THETA=0.0027;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 28041848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28041885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5016;AVGPOST=0.9959;RSQ=0.9936;ERATE=0.0006;THETA=0.0001;AC=1097;AN=2184 GT:DS:GL:BD 0.50228935 1
1 28042084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4909;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28042139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28042463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0106;AVGPOST=0.9974;RSQ=0.8983;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28042522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0005;AVGPOST=0.9989;RSQ=0.2700;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28042523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0192;AVGPOST=0.9973;RSQ=0.9530;ERATE=0.0004;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 28042524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.4989;AVGPOST=0.9941;RSQ=0.9915;ERATE=0.0009;THETA=0.0004;AC=1092;AN=2184 GT:DS:GL:BD 0.50000000 0
1 28042525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9726;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 28042549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8644;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28042563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.793;LDAF=0.0088;AVGPOST=0.9954;RSQ=0.7945;ERATE=0.0007;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28042596 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0419;AVGPOST=0.9986;RSQ=0.9838;ERATE=0.0003;THETA=0.0006;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 28042679 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28042697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1622;AVGPOST=0.9966;RSQ=0.9906;ERATE=0.0006;THETA=0.0004;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 28042706 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28042711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9323;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28042716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6706;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28042797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28042840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4992;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0009;THETA=0.0002;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 28042928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0554;AVGPOST=0.9983;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 28043081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.5681;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28043156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2809;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 28043284 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28043370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28043372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4999;AVGPOST=0.9957;RSQ=0.9933;ERATE=0.0006;THETA=0.0004;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 28043391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.4019;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28043555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0596;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 28043744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28043780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28043849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28043852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28043909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6393;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28043954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.893;LDAF=0.0636;AVGPOST=0.9696;RSQ=0.8046;ERATE=0.0085;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 28044152 . A AG 1310 PASS INDEL;BAVGPOST=0.993;BRSQ=0.930;LDAF=0.0477;AVGPOST=0.9826;RSQ=0.8562;ERATE=0.0025;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 28044152 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9608;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28044187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.691;LDAF=0.0057;AVGPOST=0.9932;RSQ=0.5407;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28044211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0537;AVGPOST=0.9989;RSQ=0.9924;ERATE=0.0004;THETA=0.0002;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 28044283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.728;LDAF=0.0046;AVGPOST=0.9979;RSQ=0.7944;ERATE=0.0010;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28044457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7742;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28044504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28044505 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6057;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0006;THETA=0.0001;AC=1325;AN=2184 GT:DS:GL:BD 0.60668498 1
1 28044574 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.6112;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28044838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0100;AVGPOST=0.9987;RSQ=0.9499;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28044877 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7236;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28045032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7987;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28045260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0431;AVGPOST=0.9991;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 28045265 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0544;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 28045285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0432;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 28045363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28045472 . TTA T 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4877;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28045653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28045668 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28045729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9354;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28045849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8498;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28045850 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8068;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28045881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28045955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9638;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28045958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28045966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7610;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28046016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9419;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28046099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28046202 . T TA 60 PASS INDEL;BAVGPOST=0.904;BRSQ=0.267;LDAF=0.0554;AVGPOST=0.9304;RSQ=0.5252;ERATE=0.0043;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 28046408 rs71580561 G GA 31703 PASS INDEL;BAVGPOST=0.976;BRSQ=0.964;LDAF=0.5898;AVGPOST=0.9570;RSQ=0.9363;ERATE=0.0064;THETA=0.0006;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 28046418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9606;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28046513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0214;AVGPOST=0.9989;RSQ=0.9803;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 28046637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28046652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8764;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28046746 . AT A 2542 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0369;AVGPOST=0.9992;RSQ=0.9895;ERATE=0.0004;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 28046747 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28046755 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2811;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 28046771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4993;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0001;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 28046833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2154;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 28046834 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28047046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28047077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7475;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28047216 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28047256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6231;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28047279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.4991;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28047466 . AAAGAG A 1587 PASS INDEL;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0092;AVGPOST=0.9975;RSQ=0.8736;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28047483 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.1958;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0003;THETA=0.0008;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 28047548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 28047617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28047797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3108;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0013;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 28047862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1745;AVGPOST=0.9986;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 28047953 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0039;AVGPOST=0.9972;RSQ=0.7069;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28048076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9043;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28048259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0122;AVGPOST=0.9984;RSQ=0.9460;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28048270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28048424 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28048561 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9076;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28048568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7784;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28048586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28048587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7087;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28048614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28048751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4655;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28048870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4959;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28048954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0191;AVGPOST=0.9985;RSQ=0.9718;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 28048955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0178;AVGPOST=0.9979;RSQ=0.9599;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 28048965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28048993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5070;AVGPOST=0.9982;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1108;AN=2184 GT:DS:GL:BD 0.50732601 1
1 28049107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8928;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28049113 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9995;RSQ=0.9828;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28049282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1871;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0006;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 28049308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28049356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28049463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2598;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 28049472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1953;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0004;THETA=0.0007;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 28049561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2608;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 28049603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28049609 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28049639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28049640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 28049741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9858;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 28049794 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28049817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0223;AVGPOST=0.9992;RSQ=0.9886;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 28049981 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28050006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9061;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28050022 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8685;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28050030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0777;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 28050045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.8994;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28050052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0187;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 28050097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28050117 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0464;AVGPOST=0.9994;RSQ=0.9942;ERATE=0.0004;THETA=0.0010;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 28050192 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0649;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 28050325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8677;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28050381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9996;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28050402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7822;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28050435 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8576;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28050527 rs112690168 AG A 13080 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0646;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 28050667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28050672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28050762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7363;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28050770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8414;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28050774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1517;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 28050830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8515;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28050894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8378;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28050934 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28050940 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0063;AVGPOST=0.9976;RSQ=0.8359;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28050946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28050969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3152;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 28050978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28051282 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28051371 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28051373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 28051532 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28051564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3563;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28051572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0651;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0009;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 28051612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28051680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7705;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28051711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0782;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0004;THETA=0.0017;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 28051729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0080;AVGPOST=0.9983;RSQ=0.9097;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28051853 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2755;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0005;THETA=0.0030;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 28051917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5283;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28052015 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28052129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28052590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0101;AVGPOST=0.9979;RSQ=0.9173;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28052617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28052692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9832;ERATE=0.0003;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 28052825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0183;AVGPOST=0.9986;RSQ=0.9701;ERATE=0.0004;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 28052876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0975;AVGPOST=0.9984;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 28052894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.695;LDAF=0.0069;AVGPOST=0.9968;RSQ=0.8242;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28053217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4616;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28053363 . G GTAAA 76344 PASS INDEL;BAVGPOST=0.990;BRSQ=0.959;LDAF=0.9088;AVGPOST=0.9913;RSQ=0.9667;ERATE=0.0009;THETA=0.0010;AC=1990;AN=2184 GT:DS:GL:BD 0.91117215 1
1 28053556 rs10627225 T TAAAG 140905 PASS INDEL;BAVGPOST=0.988;BRSQ=0.942;LDAF=0.9047;AVGPOST=0.9886;RSQ=0.9565;ERATE=0.0020;THETA=0.0005;AC=1982;AN=2184 GT:DS:GL:BD 0.90750915 1
1 28053561 . T TAGG 4448 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0191;AVGPOST=0.9993;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 28053608 rs34427040 TGG T 16419 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0985;AVGPOST=0.9948;RSQ=0.9758;ERATE=0.0012;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 28053799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0185;AVGPOST=0.9983;RSQ=0.9683;ERATE=0.0003;THETA=0.0026;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 28053818 . A AT 329 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8688;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28053856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28053857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0195;AVGPOST=0.9986;RSQ=0.9747;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 28053873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28053923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28054007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9702;AVGPOST=0.9996;RSQ=0.9943;ERATE=0.0003;THETA=0.0006;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 28054012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6302;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28054217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7131;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28054670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0133;AVGPOST=0.9960;RSQ=0.8942;ERATE=0.0007;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 28054730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9312;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28054751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.964;LDAF=0.0884;AVGPOST=0.9957;RSQ=0.9768;ERATE=0.0006;THETA=0.0008;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 28054803 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9135;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28054953 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6997;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28055004 . CA C 239 PASS INDEL;BAVGPOST=0.976;BRSQ=0.576;LDAF=0.0335;AVGPOST=0.9665;RSQ=0.5948;ERATE=0.0072;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 28055170 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0238;AVGPOST=0.9982;RSQ=0.9668;ERATE=0.0005;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 28055171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28055190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28055215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7512;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28055243 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0192;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 28055246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7314;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28055263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28055289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28055310 . C CT 422 PASS INDEL;BAVGPOST=0.975;BRSQ=0.451;LDAF=0.0374;AVGPOST=0.9558;RSQ=0.5301;ERATE=0.0088;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 28055519 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8688;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28055606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.844;LDAF=0.9657;AVGPOST=0.9914;RSQ=0.9042;ERATE=0.0010;THETA=0.0006;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 28055698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28055816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9833;ERATE=0.0003;THETA=0.0012;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 28055819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0972;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 28055826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9126;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28056420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0103;AVGPOST=0.9987;RSQ=0.9539;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28056553 rs11446387 T TC 104612 PASS INDEL;BAVGPOST=0.991;BRSQ=0.832;LDAF=0.9737;AVGPOST=0.9856;RSQ=0.7988;ERATE=0.0021;THETA=0.0007;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 28056586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0055;AVGPOST=0.9972;RSQ=0.7876;ERATE=0.0004;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28056603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0143;AVGPOST=0.9981;RSQ=0.9411;ERATE=0.0004;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 28056638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8857;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28056673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.5610;ERATE=0.0013;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28056701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.791;LDAF=0.0141;AVGPOST=0.9909;RSQ=0.7790;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28056716 . GT G 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8461;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28056748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28056969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6800;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28057047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7726;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28057246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28057345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6822;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28057414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1825;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 28057426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1805;AVGPOST=0.9984;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 28057521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5119;AVGPOST=0.9946;RSQ=0.9920;ERATE=0.0006;THETA=0.0008;AC=1122;AN=2184 GT:DS:GL:BD 0.51373625 1
1 28057534 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8976;AVGPOST=0.9987;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=1961;AN=2184 GT:DS:GL:BD 0.89789379 1
1 28057615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28057665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7718;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28057930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5306;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0006;THETA=0.0002;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 28058017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28058073 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28058119 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0100;AVGPOST=0.9984;RSQ=0.9388;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28058156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7508;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28058218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28058223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6528;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28058234 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28058435 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28058440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6668;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28058542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3460;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0007;THETA=0.0001;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 28058543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5310;AVGPOST=0.9978;RSQ=0.9966;ERATE=0.0005;THETA=0.0004;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 28058547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6530;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28058690 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6626;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28058722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3480;AVGPOST=0.9952;RSQ=0.9923;ERATE=0.0008;THETA=0.0002;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 28058764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0068;AVGPOST=0.9971;RSQ=0.8189;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28058792 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.910;LDAF=0.8973;AVGPOST=0.9834;RSQ=0.9438;ERATE=0.0011;THETA=0.0002;AC=1960;AN=2184 GT:DS:GL:BD 0.89743590 1
1 28058805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1806;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 28058851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0122;AVGPOST=0.9995;RSQ=0.9819;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 28059034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.958;LDAF=0.1115;AVGPOST=0.9955;RSQ=0.9841;ERATE=0.0004;THETA=0.0004;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 28059068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.7863;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28059079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28059081 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9010;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28059102 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5877;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28059106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9159;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28059118 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8304;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28059169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0116;AVGPOST=0.9973;RSQ=0.9186;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 28059171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9996;RSQ=0.9512;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28059217 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28059222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9150;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28059234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.925;LDAF=0.0308;AVGPOST=0.9964;RSQ=0.9464;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 28059246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9221;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28059518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28059620 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1859;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 28059665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6967;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28059733 . GGGA G 525 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9050;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28059858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3310;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 28059868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.8055;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28059929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3657;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0005;THETA=0.0002;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 28059982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1811;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 28059986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28060034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0136;AVGPOST=0.9979;RSQ=0.9495;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28060061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1862;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0005;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 28060062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28060080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8951;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28060105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0167;AVGPOST=0.9996;RSQ=0.9887;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 28060152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5508;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=1204;AN=2184 GT:DS:GL:BD 0.55128205 1
1 28060172 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28060288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7372;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28060290 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28060416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9469;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28060427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28060569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28060698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28060916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0900;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0004;THETA=0.0001;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 28060943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8625;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28060960 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0899;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 28060986 . CTT C 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28061017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28061032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6855;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28061068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8522;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28061098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5957;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28061122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28061172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8371;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28061231 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.6242;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28061333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28061356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28061423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4364;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 28061493 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3303;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 28061573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7761;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28061601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28061816 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9463;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28061819 . CT C 1474 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9615;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28061840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8971;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28062231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9213;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28062280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0236;AVGPOST=0.9995;RSQ=0.9905;ERATE=0.0003;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 28062405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28062460 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2567;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 28062695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2543;AVGPOST=0.9975;RSQ=0.9946;ERATE=0.0006;THETA=0.0004;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 28062732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0878;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28062975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7265;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28063002 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.7922;ERATE=0.0009;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28063068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28063070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28063071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28063077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7382;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28063109 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2067;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 28063215 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28063222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28063225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5278;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=1151;AN=2184 GT:DS:GL:BD 0.52701467 1
1 28063444 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28063462 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0220;AVGPOST=0.9982;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 28063469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9552;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28063578 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4807;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28063739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28063887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28063901 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28064166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5279;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0006;AC=1151;AN=2184 GT:DS:GL:BD 0.52701467 1
1 28064382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28064424 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7907;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28064427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4790;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28064430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28064607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.906;LDAF=0.0125;AVGPOST=0.9978;RSQ=0.9313;ERATE=0.0013;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28064678 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0174;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 28064683 . A AT 10896 PASS INDEL;BAVGPOST=0.980;BRSQ=0.965;LDAF=0.3211;AVGPOST=0.9924;RSQ=0.9871;ERATE=0.0010;THETA=0.0020;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 28064852 rs66483664 T TC 47845 PASS INDEL;BAVGPOST=0.987;BRSQ=0.976;LDAF=0.3236;AVGPOST=0.9945;RSQ=0.9908;ERATE=0.0003;THETA=0.0005;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 28064855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.5905;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28064880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0094;AVGPOST=0.9969;RSQ=0.8915;ERATE=0.0003;THETA=0.0001;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28064998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6439;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28065016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9116;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28065018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.959;LDAF=0.0403;AVGPOST=0.9988;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 28065073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28065114 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0358;AVGPOST=0.9992;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 28065196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0653;AVGPOST=0.9990;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 28065219 . AAG A 43 PASS INDEL;BAVGPOST=0.991;BRSQ=0.632;LDAF=0.0218;AVGPOST=0.9766;RSQ=0.5593;ERATE=0.0075;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28065334 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2546;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0006;THETA=0.0004;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 28065351 . CAG C 1909 PASS INDEL;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0137;AVGPOST=0.9958;RSQ=0.8831;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 28065410 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7607;ERATE=0.0011;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28065416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0057;AVGPOST=0.9983;RSQ=0.8936;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28065437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0678;AVGPOST=0.9968;RSQ=0.9824;ERATE=0.0003;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 28065491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8037;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28065507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9521;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28065624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7465;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28065717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8426;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28065718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0878;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28065767 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2563;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 28065778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28065798 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9842;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28065808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0243;AVGPOST=0.9989;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28065989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2591;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0005;THETA=0.0005;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 28066009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28066113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7103;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28066123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2591;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 28066209 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2600;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 28066257 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8390;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28066450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0186;AVGPOST=0.9976;RSQ=0.9542;ERATE=0.0004;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 28066539 . TA T 661 PASS INDEL;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0107;AVGPOST=0.9968;RSQ=0.8872;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28066592 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2584;AVGPOST=0.9976;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 28066651 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5045;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28066956 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6220;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28067090 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9996;RSQ=0.9907;ERATE=0.0003;THETA=0.0010;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 28067144 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5781;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28067224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0326;AVGPOST=0.9984;RSQ=0.9794;ERATE=0.0004;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 28067235 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9994;RSQ=0.0494;ERATE=0.0004;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 28067248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9305;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28067344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0132;AVGPOST=0.9977;RSQ=0.9312;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 28067431 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28067497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28067532 . C CA 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6073;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28067558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.4609;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28067631 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28067702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0055;AVGPOST=0.9979;RSQ=0.8329;ERATE=0.0007;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28067771 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.824;LDAF=0.0100;AVGPOST=0.9977;RSQ=0.9011;ERATE=0.0005;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28067789 . AATTTT A 146 PASS INDEL;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6353;ERATE=0.0005;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28067813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7678;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28067849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28067882 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0097;AVGPOST=0.9982;RSQ=0.9161;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28068000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9787;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28068107 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7110;AVGPOST=0.9948;RSQ=0.9901;ERATE=0.0005;THETA=0.0005;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 28068198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7200;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28068332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9367;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28068336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.799;LDAF=0.0090;AVGPOST=0.9970;RSQ=0.8606;ERATE=0.0007;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28068384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9038;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28068385 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28068414 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28068544 . C CGTA 104 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28068822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5701;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28068974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.847;LDAF=0.0083;AVGPOST=0.9974;RSQ=0.8828;ERATE=0.0003;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28069053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28069059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28069060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28069067 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8747;ERATE=0.0009;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28069112 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28069179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28069193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28069202 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28069217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7726;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28069218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28069266 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7274;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0006;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 28069377 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8753;ERATE=0.0006;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28069394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8614;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28069562 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0091;AVGPOST=0.9994;RSQ=0.9738;ERATE=0.0003;THETA=0.0014;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28069572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6802;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=1484;AN=2184 GT:DS:GL:BD 0.67948717 1
1 28069623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6789;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28069810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9576;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28069853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0061;AVGPOST=0.9976;RSQ=0.8577;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28069891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9398;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28070024 . ATCCTGCTCCTTCT A 724 PASS INDEL;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9011;ERATE=0.0005;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28070139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28070350 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7654;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28070563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0322;AVGPOST=0.9990;RSQ=0.9900;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 28070622 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0253;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 28070639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8493;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28070677 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7565;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28070706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28070711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9350;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28070731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.7365;ERATE=0.0015;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28070795 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7270;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0006;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 28070879 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9527;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28070930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8242;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28070949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28071026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8282;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28071028 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0188;AVGPOST=0.9988;RSQ=0.9809;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 28071194 . TTGA T 335 PASS INDEL;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8594;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28071220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.4136;AVGPOST=0.9804;RSQ=0.9748;ERATE=0.0012;THETA=0.0002;AC=907;AN=2184 GT:DS:GL:BD 0.41529304 0
1 28071224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28071234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28071334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0053;AVGPOST=0.9975;RSQ=0.8167;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28071459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28071460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28071476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28071514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9058;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28071584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8382;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28071708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6926;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28071806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5652;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28071818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 28071831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4936;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28071892 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7019;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=1533;AN=2184 GT:DS:GL:BD 0.70192307 1
1 28072076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28072185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28072191 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8036;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28072247 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28072280 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28072320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0060;AVGPOST=0.9971;RSQ=0.8250;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28072415 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7726;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28072419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8627;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28072460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.834;LDAF=0.0147;AVGPOST=0.9928;RSQ=0.8157;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 28072553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28072555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5202;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28072609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28072630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0080;AVGPOST=0.9985;RSQ=0.9345;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28072724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.910;LDAF=0.0574;AVGPOST=0.9915;RSQ=0.9503;ERATE=0.0004;THETA=0.0005;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 28072820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28072885 rs3835639 CTT C 1191 PASS INDEL;BAVGPOST=0.995;BRSQ=0.851;LDAF=0.0177;AVGPOST=0.9970;RSQ=0.9291;ERATE=0.0005;THETA=0.0032;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 28072899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7431;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28072918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9566;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28073033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9662;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28073056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9118;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28073156 rs3835640 A ATG 2765 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0177;AVGPOST=0.9986;RSQ=0.9662;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 28073197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0082;AVGPOST=0.9952;RSQ=0.7994;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28073332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4941;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28073356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0652;AVGPOST=0.9991;RSQ=0.9936;ERATE=0.0004;THETA=0.0010;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 28073681 . CAGA C 95 PASS INDEL;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7802;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28073690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.708;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.7908;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28073736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7639;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28073780 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7644;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28073877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7958;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28073883 . T TG 71 PASS INDEL;BAVGPOST=0.998;BRSQ=0.562;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6058;ERATE=0.0008;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28073932 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0053;AVGPOST=0.9958;RSQ=0.6970;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28074075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.748;LDAF=0.0743;AVGPOST=0.9806;RSQ=0.9020;ERATE=0.0006;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 28074131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8304;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28074225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9466;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28074260 . C CG 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5181;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28074265 . G GT 286 PASS INDEL;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7358;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28074335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0920;AVGPOST=0.9990;RSQ=0.9948;ERATE=0.0004;THETA=0.0007;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 28074410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0045;AVGPOST=0.9996;RSQ=0.9591;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28074506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9835;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28074555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28074577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28074592 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4232;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28074647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0057;AVGPOST=0.9981;RSQ=0.8576;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28074751 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5517;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28074767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28074813 . CTA C 179 PASS INDEL;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5307;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28074834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1209;AVGPOST=0.9974;RSQ=0.9918;ERATE=0.0006;THETA=0.0009;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 28074871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28074912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4248;AVGPOST=0.9969;RSQ=0.9954;ERATE=0.0006;THETA=0.0002;AC=926;AN=2184 GT:DS:GL:BD 0.42399266 0
1 28075094 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1192;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 28075142 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0123;AVGPOST=0.9986;RSQ=0.9582;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28075173 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9926;AVGPOST=0.9987;RSQ=0.9319;ERATE=0.0003;THETA=0.0008;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 28075338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0912;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0003;THETA=0.0049;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 28075424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1194;AVGPOST=0.9975;RSQ=0.9913;ERATE=0.0007;THETA=0.0003;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 28075443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6326;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28075466 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8630;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28075518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1205;AVGPOST=0.9976;RSQ=0.9916;ERATE=0.0004;THETA=0.0007;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 28075645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2414;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0003;THETA=0.0008;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 28075675 . T TTG 14008 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0904;AVGPOST=0.9979;RSQ=0.9910;ERATE=0.0004;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 28075703 . TG T 5079 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0910;AVGPOST=0.9963;RSQ=0.9841;ERATE=0.0006;THETA=0.0006;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 28075706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0907;AVGPOST=0.9967;RSQ=0.9845;ERATE=0.0007;THETA=0.0009;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 28075707 . T TG 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5652;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28075726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28075736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2885;AVGPOST=0.9958;RSQ=0.9923;ERATE=0.0006;THETA=0.0006;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 28075788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9063;ERATE=0.0004;THETA=0.0043;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28075900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5781;ERATE=0.0007;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28076076 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8212;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28076151 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7186;AVGPOST=0.9964;RSQ=0.9927;ERATE=0.0009;THETA=0.0007;AC=1571;AN=2184 GT:DS:GL:BD 0.71932232 1
1 28076435 . CA C 500 PASS INDEL;BAVGPOST=0.998;BRSQ=0.730;LDAF=0.0138;AVGPOST=0.9862;RSQ=0.6247;ERATE=0.0008;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28076650 . T TA 2037 PASS INDEL;BAVGPOST=0.794;BRSQ=0.659;LDAF=0.4448;AVGPOST=0.7539;RSQ=0.6238;ERATE=0.0564;THETA=0.0005;AC=960;AN=2184 GT:DS:GL:BD 0.43956044 0
1 28076659 . T TG 1882 PASS INDEL;BAVGPOST=0.792;BRSQ=0.658;LDAF=0.4318;AVGPOST=0.7593;RSQ=0.6370;ERATE=0.0548;THETA=0.0005;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 28076669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28076679 rs66509778 CTTAT C 18448 PASS INDEL;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1505;AVGPOST=0.9948;RSQ=0.9847;ERATE=0.0007;THETA=0.0013;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 28076908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6053;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28077065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0048;AVGPOST=0.9967;RSQ=0.7427;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28077120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28077150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1211;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 28077267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0903;AVGPOST=0.9984;RSQ=0.9932;ERATE=0.0004;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 28077397 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0655;AVGPOST=0.9985;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 28077406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5527;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28077492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28077557 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28077741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28077809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4766;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28077938 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4526;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28078079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0124;AVGPOST=0.9990;RSQ=0.9677;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28078148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28078174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.832;LDAF=0.0074;AVGPOST=0.9986;RSQ=0.9105;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28078239 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8728;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28078352 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28078375 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28078437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.789;LDAF=0.1381;AVGPOST=0.9252;RSQ=0.7492;ERATE=0.0172;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 28078476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28078554 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0312;AVGPOST=0.9991;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 28078556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1309;AVGPOST=0.9976;RSQ=0.9908;ERATE=0.0004;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 28078576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.407;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28078579 . A AT 4148 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0302;AVGPOST=0.9991;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 28078584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6702;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28078612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28078670 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0072;AVGPOST=0.9963;RSQ=0.8216;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28078841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 28078926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28079060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.938;LDAF=0.0390;AVGPOST=0.9913;RSQ=0.9098;ERATE=0.0005;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 28079130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28079214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28079319 . C CT 230 PASS INDEL;BAVGPOST=0.986;BRSQ=0.556;LDAF=0.0360;AVGPOST=0.9564;RSQ=0.5353;ERATE=0.0057;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 28079354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0296;AVGPOST=0.9983;RSQ=0.9780;ERATE=0.0004;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 28079489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6651;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28079542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3398;AVGPOST=0.9943;RSQ=0.9892;ERATE=0.0007;THETA=0.0003;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 28079687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2244;AVGPOST=0.9942;RSQ=0.9857;ERATE=0.0007;THETA=0.0003;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 28079801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.3405;AVGPOST=0.9949;RSQ=0.9899;ERATE=0.0005;THETA=0.0002;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 28079828 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7399;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28079871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0072;AVGPOST=0.9912;RSQ=0.5164;ERATE=0.0009;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28079888 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9753;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28079908 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6463;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28079922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9068;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28080162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9413;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28080297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9350;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28080309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28080326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9625;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28080348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28080356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28080362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28080401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1585;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 28080403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7096;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28080470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28080579 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8629;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28080654 . A AG 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4146;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28080670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28080683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9701;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28080859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28080860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7594;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28080900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6183;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28080931 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6707;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28080977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9365;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28081070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28081076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7499;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28081229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9903;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28081274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5202;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28081493 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.9373;AVGPOST=0.9989;RSQ=0.9924;ERATE=0.0004;THETA=0.0002;AC=2047;AN=2184 GT:DS:GL:BD 0.93727106 1
1 28081537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9753;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28081539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9504;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28081622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28081639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2270;AVGPOST=0.9948;RSQ=0.9895;ERATE=0.0008;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 28081640 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28081661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 28081771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9396;AVGPOST=0.9989;RSQ=0.9917;ERATE=0.0004;THETA=0.0003;AC=2052;AN=2184 GT:DS:GL:BD 0.93956041 1
1 28081915 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6939;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28082049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9563;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28082115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7803;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28082176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2191;AVGPOST=0.9975;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 28082205 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28082209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28082235 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28082307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28082311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7771;AVGPOST=0.9965;RSQ=0.9924;ERATE=0.0004;THETA=0.0012;AC=1698;AN=2184 GT:DS:GL:BD 0.77747256 1
1 28082401 MERGED_DEL_2_4821 T ADELA . . SV;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0006;CIEND=-63;90;CIPOS=-72;85;END=118986234;SOURCE=BreakDancer_118983690_118986242;GenomeStrip_118983 GT:DS:GL:BD 0.00045788 0
1 28082407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28082471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0089;AVGPOST=0.9969;RSQ=0.8452;ERATE=0.0007;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28082539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0080;AVGPOST=0.9973;RSQ=0.8679;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28082546 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4332;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28082579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9860;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28082580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9494;ERATE=0.0003;THETA=0.0024;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28082726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.741;LDAF=0.0076;AVGPOST=0.9975;RSQ=0.8593;ERATE=0.0007;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28082823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8788;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28082869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.1235;AVGPOST=0.9947;RSQ=0.9859;ERATE=0.0006;THETA=0.0005;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 28082907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.937;LDAF=0.1269;AVGPOST=0.9926;RSQ=0.9802;ERATE=0.0007;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 28082990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.883;LDAF=0.1026;AVGPOST=0.9699;RSQ=0.9118;ERATE=0.0020;THETA=0.0009;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 28083039 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9210;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28083047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.869;LDAF=0.0932;AVGPOST=0.9778;RSQ=0.9239;ERATE=0.0008;THETA=0.0005;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 28083052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6767;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28083063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.928;LDAF=0.7658;AVGPOST=0.9734;RSQ=0.9440;ERATE=0.0021;THETA=0.0013;AC=1686;AN=2184 GT:DS:GL:BD 0.77197802 1
1 28083079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0069;AVGPOST=0.9991;RSQ=0.9446;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28083124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8467;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28083141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1294;AVGPOST=0.9974;RSQ=0.9931;ERATE=0.0005;THETA=0.0005;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 28083170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.781;LDAF=0.0965;AVGPOST=0.9565;RSQ=0.8640;ERATE=0.0025;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 28083404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.911;LDAF=0.1290;AVGPOST=0.9904;RSQ=0.9759;ERATE=0.0007;THETA=0.0006;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 28083464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9551;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28083487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3674;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28083492 . GGACA G 152 PASS INDEL;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0026;AVGPOST=0.9958;RSQ=0.3368;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28083522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8990;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28083569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5562;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28083577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28083679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6610;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28083714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.926;LDAF=0.7848;AVGPOST=0.9804;RSQ=0.9551;ERATE=0.0008;THETA=0.0014;AC=1728;AN=2184 GT:DS:GL:BD 0.79120880 1
1 28083809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.481;LDAF=0.0043;AVGPOST=0.9950;RSQ=0.4809;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28083810 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5224;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28083872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4851;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28083897 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8351;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28083954 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28083959 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0195;AVGPOST=0.9984;RSQ=0.9649;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 28084001 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.526;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6107;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28084030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7530;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28084071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8940;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28084100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8684;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28084308 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8291;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28084407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.945;LDAF=0.1320;AVGPOST=0.9864;RSQ=0.9675;ERATE=0.0006;THETA=0.0011;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 28084426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.947;LDAF=0.1158;AVGPOST=0.9921;RSQ=0.9774;ERATE=0.0003;THETA=0.0005;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 28084443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0112;AVGPOST=0.9988;RSQ=0.9607;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28084453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28084523 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9631;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28084542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4978;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28084564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8156;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28084693 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.507;LDAF=0.0104;AVGPOST=0.9875;RSQ=0.5470;ERATE=0.0031;THETA=0.0026;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28084695 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0185;AVGPOST=0.9986;RSQ=0.9675;ERATE=0.0003;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 28084719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0118;AVGPOST=0.9973;RSQ=0.9117;ERATE=0.0005;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28084747 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7557;ERATE=0.0003;THETA=0.0043;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28084796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28084803 . TC T 683 PASS INDEL;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0108;AVGPOST=0.9993;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 28084807 rs59838958 G GAGCT 2458 PASS INDEL;BAVGPOST=0.942;BRSQ=0.713;LDAF=0.0912;AVGPOST=0.9637;RSQ=0.8818;ERATE=0.0045;THETA=0.0008;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 28084822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.870;LDAF=0.1058;AVGPOST=0.9783;RSQ=0.9403;ERATE=0.0010;THETA=0.0007;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 28084843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.671;LDAF=0.0160;AVGPOST=0.9871;RSQ=0.7141;ERATE=0.0006;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 28084966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6649;ERATE=0.0004;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28084987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.556;LDAF=0.0223;AVGPOST=0.9858;RSQ=0.7784;ERATE=0.0004;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 28084991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.926;LDAF=0.1252;AVGPOST=0.9879;RSQ=0.9701;ERATE=0.0009;THETA=0.0006;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 28085171 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.948;LDAF=0.6171;AVGPOST=0.9648;RSQ=0.9488;ERATE=0.0087;THETA=0.0035;AC=1356;AN=2184 GT:DS:GL:BD 0.62087911 1
1 28085186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28085194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.626;LDAF=0.0065;AVGPOST=0.9927;RSQ=0.5243;ERATE=0.0010;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28085212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8375;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28085280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7495;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28085284 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.1290;AVGPOST=0.9957;RSQ=0.9896;ERATE=0.0003;THETA=0.0006;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 28085296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.960;LDAF=0.6128;AVGPOST=0.9625;RSQ=0.9457;ERATE=0.0077;THETA=0.0012;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 28085297 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.605;LDAF=0.0101;AVGPOST=0.9966;RSQ=0.8826;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28085412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.833;LDAF=0.0168;AVGPOST=0.9966;RSQ=0.9301;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 28085467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9428;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28085545 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.567;LDAF=0.0219;AVGPOST=0.9837;RSQ=0.6990;ERATE=0.0007;THETA=0.0039;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 28085629 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.718;LDAF=0.0112;AVGPOST=0.9903;RSQ=0.6590;ERATE=0.0007;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28086039 . GA G 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4134;ERATE=0.0007;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28086079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6083;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28086146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6409;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28086227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9666;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28086252 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.975;LDAF=0.4011;AVGPOST=0.9714;RSQ=0.9592;ERATE=0.0017;THETA=0.0006;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 28086280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0118;AVGPOST=0.9967;RSQ=0.8940;ERATE=0.0007;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28086308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.621;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8611;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28086337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0035;AVGPOST=0.9951;RSQ=0.5142;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28086470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0041;AVGPOST=0.9978;RSQ=0.8001;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28086509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0123;AVGPOST=0.9972;RSQ=0.9130;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28086635 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.730;LDAF=0.0978;AVGPOST=0.9794;RSQ=0.9281;ERATE=0.0010;THETA=0.0006;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 28086725 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.488;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.6265;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28086782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0242;AVGPOST=0.9973;RSQ=0.9601;ERATE=0.0004;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28087032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4664;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28087149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5048;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28087153 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.644;LDAF=0.0841;AVGPOST=0.9583;RSQ=0.8171;ERATE=0.0043;THETA=0.0005;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 28087208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.938;LDAF=0.1261;AVGPOST=0.9877;RSQ=0.9653;ERATE=0.0011;THETA=0.0004;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 28087518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.571;BRSQ=0.345;LDAF=0.6617;AVGPOST=0.7276;RSQ=0.5587;ERATE=0.0073;THETA=0.0195;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 28095039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.349;LDAF=0.0900;AVGPOST=0.8882;RSQ=0.4368;ERATE=0.0050;THETA=0.0082;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 28095042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.815;BRSQ=0.336;LDAF=0.1465;AVGPOST=0.8516;RSQ=0.5589;ERATE=0.0023;THETA=0.0073;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 28095056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.623;BRSQ=0.367;LDAF=0.4227;AVGPOST=0.7175;RSQ=0.4674;ERATE=0.0217;THETA=0.0185;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 28095061 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.549;BRSQ=0.265;LDAF=0.5660;AVGPOST=0.6620;RSQ=0.4887;ERATE=0.0040;THETA=0.0046;AC=1335;AN=2184 GT:DS:GL:BD 0.61126375 1
1 28095241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.535;BRSQ=0.333;LDAF=0.6219;AVGPOST=0.6756;RSQ=0.4924;ERATE=0.0093;THETA=0.0057;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 28095244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.157;LDAF=0.0106;AVGPOST=0.9799;RSQ=0.1589;ERATE=0.0015;THETA=0.0085;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28095247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.318;LDAF=0.0469;AVGPOST=0.9320;RSQ=0.3388;ERATE=0.0048;THETA=0.0026;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 28095256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.486;LDAF=0.0434;AVGPOST=0.9465;RSQ=0.5061;ERATE=0.0010;THETA=0.0063;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 28095449 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.454;LDAF=0.0715;AVGPOST=0.9155;RSQ=0.5124;ERATE=0.0016;THETA=0.0077;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 28095456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.437;BRSQ=0.334;LDAF=0.8788;AVGPOST=0.8489;RSQ=0.4945;ERATE=0.0019;THETA=0.0094;AC=2022;AN=2184 GT:DS:GL:BD 0.92582417 1
1 28095475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.792;BRSQ=0.365;LDAF=0.2006;AVGPOST=0.8144;RSQ=0.5431;ERATE=0.0040;THETA=0.0145;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 28095487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.274;LDAF=0.0738;AVGPOST=0.9023;RSQ=0.4142;ERATE=0.0049;THETA=0.0138;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 28095498 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.526;LDAF=0.0339;AVGPOST=0.9669;RSQ=0.5951;ERATE=0.0004;THETA=0.0187;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 28095506 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.669;LDAF=0.0477;AVGPOST=0.9817;RSQ=0.8513;ERATE=0.0009;THETA=0.0191;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 28095972 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.666;LDAF=0.0439;AVGPOST=0.9798;RSQ=0.8237;ERATE=0.0010;THETA=0.0185;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 28095985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.488;LDAF=0.0138;AVGPOST=0.9834;RSQ=0.5016;ERATE=0.0010;THETA=0.0031;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28096003 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.672;BRSQ=0.439;LDAF=0.3658;AVGPOST=0.7655;RSQ=0.6216;ERATE=0.0024;THETA=0.0032;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 28096004 . AC A 135 PASS INDEL;BAVGPOST=0.613;BRSQ=0.003;LDAF=0.8461;AVGPOST=0.7367;RSQ=0.1508;ERATE=0.0114;THETA=0.0119;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 28096308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.519;BRSQ=0.142;LDAF=0.4000;AVGPOST=0.6481;RSQ=0.2850;ERATE=0.0272;THETA=0.0132;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 28096952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.833;BRSQ=0.164;LDAF=0.1632;AVGPOST=0.7532;RSQ=0.2294;ERATE=0.0199;THETA=0.0042;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 28096987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.568;BRSQ=0.204;LDAF=0.5581;AVGPOST=0.6708;RSQ=0.4197;ERATE=0.0048;THETA=0.0057;AC=1329;AN=2184 GT:DS:GL:BD 0.60851645 1
1 28097009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.546;BRSQ=0.335;LDAF=0.7235;AVGPOST=0.7920;RSQ=0.5328;ERATE=0.0062;THETA=0.0210;AC=1698;AN=2184 GT:DS:GL:BD 0.77747256 1
1 28097037 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.781;BRSQ=0.352;LDAF=0.2763;AVGPOST=0.7887;RSQ=0.5042;ERATE=0.0195;THETA=0.0135;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 28097051 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.424;LDAF=0.0564;AVGPOST=0.9400;RSQ=0.5563;ERATE=0.0033;THETA=0.0078;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 28097062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.472;BRSQ=0.140;LDAF=0.3385;AVGPOST=0.6590;RSQ=0.3602;ERATE=0.0122;THETA=0.0196;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 28097128 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.594;BRSQ=0.131;LDAF=0.3615;AVGPOST=0.6594;RSQ=0.3511;ERATE=0.0133;THETA=0.0153;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 28097148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.747;BRSQ=0.301;LDAF=0.2269;AVGPOST=0.7851;RSQ=0.4678;ERATE=0.0071;THETA=0.0122;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 28097157 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.337;LDAF=0.0168;AVGPOST=0.9779;RSQ=0.4320;ERATE=0.0015;THETA=0.0075;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28097159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.870;BRSQ=0.360;LDAF=0.1329;AVGPOST=0.8509;RSQ=0.4715;ERATE=0.0018;THETA=0.0114;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 28097162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.893;BRSQ=0.318;LDAF=0.1128;AVGPOST=0.8525;RSQ=0.3845;ERATE=0.0146;THETA=0.0165;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 28097308 . AT A 241 PASS INDEL;BAVGPOST=0.945;BRSQ=0.401;LDAF=0.0673;AVGPOST=0.9153;RSQ=0.4259;ERATE=0.0040;THETA=0.0263;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 28097323 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.165;LDAF=0.0539;AVGPOST=0.9054;RSQ=0.2018;ERATE=0.0048;THETA=0.0176;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28097371 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.412;BRSQ=0.085;LDAF=0.3709;AVGPOST=0.6011;RSQ=0.2560;ERATE=0.0149;THETA=0.0119;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 28097383 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.424;BRSQ=0.073;LDAF=0.3103;AVGPOST=0.6432;RSQ=0.3146;ERATE=0.0024;THETA=0.0103;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 28097388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.769;BRSQ=0.116;LDAF=0.2058;AVGPOST=0.6937;RSQ=0.2225;ERATE=0.0151;THETA=0.0029;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 28097390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.903;BRSQ=0.119;LDAF=0.1031;AVGPOST=0.8271;RSQ=0.2116;ERATE=0.0077;THETA=0.0138;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 28097394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.699;BRSQ=0.189;LDAF=0.2456;AVGPOST=0.7217;RSQ=0.3696;ERATE=0.0160;THETA=0.0052;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 28097474 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.802;BRSQ=0.229;LDAF=0.1759;AVGPOST=0.7606;RSQ=0.3251;ERATE=0.0109;THETA=0.0069;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 28097622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.204;LDAF=0.0310;AVGPOST=0.9531;RSQ=0.3332;ERATE=0.0017;THETA=0.0237;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28097629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.757;BRSQ=0.207;LDAF=0.2031;AVGPOST=0.7488;RSQ=0.3796;ERATE=0.0040;THETA=0.0165;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 28097631 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.045;LDAF=0.0328;AVGPOST=0.9374;RSQ=0.1366;ERATE=0.0034;THETA=0.0125;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28097669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.880;BRSQ=0.372;LDAF=0.0957;AVGPOST=0.9073;RSQ=0.6129;ERATE=0.0022;THETA=0.0107;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 28097737 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.713;BRSQ=0.457;LDAF=0.3459;AVGPOST=0.7843;RSQ=0.5940;ERATE=0.0010;THETA=0.0027;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 28097748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.731;BRSQ=0.390;LDAF=0.2543;AVGPOST=0.7904;RSQ=0.5640;ERATE=0.0012;THETA=0.0044;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 28097761 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.713;BRSQ=0.460;LDAF=0.3435;AVGPOST=0.7849;RSQ=0.5968;ERATE=0.0020;THETA=0.0220;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 28097765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.663;BRSQ=0.316;LDAF=0.3737;AVGPOST=0.7147;RSQ=0.4774;ERATE=0.0101;THETA=0.0144;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 28097779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.280;LDAF=0.0534;AVGPOST=0.9266;RSQ=0.3991;ERATE=0.0014;THETA=0.0127;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 28097794 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.607;BRSQ=0.393;LDAF=0.3590;AVGPOST=0.6777;RSQ=0.4666;ERATE=0.0141;THETA=0.0174;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 28097829 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.599;BRSQ=0.456;LDAF=0.5019;AVGPOST=0.6630;RSQ=0.5051;ERATE=0.0099;THETA=0.0080;AC=1047;AN=2184 GT:DS:GL:BD 0.47939560 0
1 28097854 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.304;LDAF=0.0105;AVGPOST=0.9832;RSQ=0.3270;ERATE=0.0012;THETA=0.0072;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28097869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.433;LDAF=0.0109;AVGPOST=0.9859;RSQ=0.4425;ERATE=0.0007;THETA=0.0073;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28097897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.482;LDAF=0.0217;AVGPOST=0.9699;RSQ=0.3886;ERATE=0.0014;THETA=0.0181;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28097912 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.237;LDAF=0.0674;AVGPOST=0.9063;RSQ=0.3972;ERATE=0.0035;THETA=0.0107;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 28097913 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.198;LDAF=0.0076;AVGPOST=0.9860;RSQ=0.1810;ERATE=0.0010;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28097914 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.883;BRSQ=0.238;LDAF=0.0859;AVGPOST=0.8860;RSQ=0.4273;ERATE=0.0020;THETA=0.0174;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 28097916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.811;BRSQ=0.286;LDAF=0.1476;AVGPOST=0.8318;RSQ=0.5168;ERATE=0.0021;THETA=0.0101;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 28097932 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.292;LDAF=0.0227;AVGPOST=0.9640;RSQ=0.3273;ERATE=0.0006;THETA=0.0096;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28097933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.766;BRSQ=0.371;LDAF=0.2127;AVGPOST=0.7936;RSQ=0.5608;ERATE=0.0038;THETA=0.0050;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 28097962 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.291;LDAF=0.0063;AVGPOST=0.9887;RSQ=0.1866;ERATE=0.0011;THETA=0.0111;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28097975 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.169;LDAF=0.0468;AVGPOST=0.9251;RSQ=0.3083;ERATE=0.0041;THETA=0.0032;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 28097979 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.253;LDAF=0.0080;AVGPOST=0.9873;RSQ=0.2711;ERATE=0.0015;THETA=0.0094;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28098000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.217;LDAF=0.0068;AVGPOST=0.9873;RSQ=0.1740;ERATE=0.0014;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28098002 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.516;LDAF=0.0108;AVGPOST=0.9875;RSQ=0.4828;ERATE=0.0008;THETA=0.0077;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28098288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.563;BRSQ=0.292;LDAF=0.8515;AVGPOST=0.8202;RSQ=0.4658;ERATE=0.0047;THETA=0.0142;AC=1994;AN=2184 GT:DS:GL:BD 0.91300368 1
1 28098327 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0099;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28098566 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.657;LDAF=0.0260;AVGPOST=0.9804;RSQ=0.6840;ERATE=0.0008;THETA=0.0110;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 28098596 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.656;LDAF=0.0258;AVGPOST=0.9817;RSQ=0.6953;ERATE=0.0011;THETA=0.0058;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 28098601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.619;LDAF=0.0073;AVGPOST=0.9945;RSQ=0.6681;ERATE=0.0008;THETA=0.0089;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28098607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.734;BRSQ=0.419;LDAF=0.3475;AVGPOST=0.7795;RSQ=0.5563;ERATE=0.0244;THETA=0.0058;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 28098639 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.579;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4281;ERATE=0.0006;THETA=0.0118;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28098644 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3756;ERATE=0.0005;THETA=0.0089;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28098659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.347;LDAF=0.0228;AVGPOST=0.9711;RSQ=0.4541;ERATE=0.0014;THETA=0.0169;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 28098663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0043;AVGPOST=0.9959;RSQ=0.5569;ERATE=0.0006;THETA=0.0141;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28098667 . A AT 297 PASS INDEL;BAVGPOST=0.880;BRSQ=0.330;LDAF=0.1141;AVGPOST=0.8651;RSQ=0.4836;ERATE=0.0015;THETA=0.0040;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 28098667 . C CT 512 PASS INDEL;BAVGPOST=0.872;BRSQ=0.324;LDAF=0.1040;AVGPOST=0.8745;RSQ=0.4621;ERATE=0.0043;THETA=0.0040;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 28098672 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.843;BRSQ=0.589;LDAF=0.2999;AVGPOST=0.8522;RSQ=0.6694;ERATE=0.0174;THETA=0.0051;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 28098938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.651;BRSQ=0.338;LDAF=0.3969;AVGPOST=0.7205;RSQ=0.4923;ERATE=0.0175;THETA=0.0125;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 28099068 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.431;LDAF=0.0064;AVGPOST=0.9910;RSQ=0.3951;ERATE=0.0006;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28099069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.432;LDAF=0.0521;AVGPOST=0.9336;RSQ=0.4570;ERATE=0.0041;THETA=0.0107;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 28099338 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.467;LDAF=0.0114;AVGPOST=0.9915;RSQ=0.6927;ERATE=0.0008;THETA=0.0094;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28099376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.807;BRSQ=0.203;LDAF=0.1754;AVGPOST=0.7594;RSQ=0.3197;ERATE=0.0167;THETA=0.0129;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 28099512 . AG A 13 PASS INDEL;BAVGPOST=0.986;BRSQ=0.325;LDAF=0.0128;AVGPOST=0.9807;RSQ=0.3287;ERATE=0.0014;THETA=0.0139;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28099527 . GT G 37 PASS INDEL;BAVGPOST=0.961;BRSQ=0.187;LDAF=0.0274;AVGPOST=0.9542;RSQ=0.2524;ERATE=0.0033;THETA=0.0108;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28099528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.457;LDAF=0.0490;AVGPOST=0.9543;RSQ=0.6337;ERATE=0.0012;THETA=0.0096;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 28099589 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.661;BRSQ=0.569;LDAF=0.4240;AVGPOST=0.7656;RSQ=0.6823;ERATE=0.0024;THETA=0.0051;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 28099592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.504;LDAF=0.0555;AVGPOST=0.9576;RSQ=0.6948;ERATE=0.0017;THETA=0.0068;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 28099601 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.813;BRSQ=0.389;LDAF=0.1791;AVGPOST=0.8270;RSQ=0.5473;ERATE=0.0034;THETA=0.0136;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 28099603 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.711;BRSQ=0.557;LDAF=0.3480;AVGPOST=0.8104;RSQ=0.7157;ERATE=0.0007;THETA=0.0104;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 28099687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.388;LDAF=0.0839;AVGPOST=0.8953;RSQ=0.4588;ERATE=0.0040;THETA=0.0058;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 28099696 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.315;LDAF=0.0370;AVGPOST=0.9467;RSQ=0.3771;ERATE=0.0043;THETA=0.0072;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 28099697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.833;BRSQ=0.380;LDAF=0.1399;AVGPOST=0.8549;RSQ=0.5431;ERATE=0.0011;THETA=0.0168;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 28099698 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0195;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28101620 . CACCTT C 1272 PASS INDEL;BAVGPOST=0.974;BRSQ=0.315;LDAF=0.0318;AVGPOST=0.9527;RSQ=0.3227;ERATE=0.0049;THETA=0.0082;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28103110 . TCTTA T 718 PASS INDEL;BAVGPOST=0.826;BRSQ=0.061;LDAF=0.1216;AVGPOST=0.7931;RSQ=0.1896;ERATE=0.0062;THETA=0.0132;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 28106044 . G GA 298 PASS INDEL;BAVGPOST=0.912;BRSQ=0.164;LDAF=0.1201;AVGPOST=0.8047;RSQ=0.2231;ERATE=0.0152;THETA=0.0146;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 28107850 rs56998788 G GC 397 PASS INDEL;BAVGPOST=0.971;BRSQ=0.290;LDAF=0.0282;AVGPOST=0.9590;RSQ=0.3368;ERATE=0.0032;THETA=0.0315;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28108010 . T TG 72 PASS INDEL;BAVGPOST=0.984;BRSQ=0.205;LDAF=0.0831;AVGPOST=0.8573;RSQ=0.2293;ERATE=0.0060;THETA=0.0166;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 28108084 . T TG 15 PASS INDEL;BAVGPOST=0.994;BRSQ=0.137;LDAF=0.0476;AVGPOST=0.9103;RSQ=0.1314;ERATE=0.0055;THETA=0.0227;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28109124 . T TTG 309 PASS INDEL;BAVGPOST=0.997;BRSQ=0.500;LDAF=0.0131;AVGPOST=0.9788;RSQ=0.2828;ERATE=0.0012;THETA=0.0068;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28109205 . AG A 1244 PASS INDEL;BAVGPOST=0.933;BRSQ=0.199;LDAF=0.0973;AVGPOST=0.8378;RSQ=0.2169;ERATE=0.0066;THETA=0.0182;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28110524 rs112339236 TA T 1696 PASS INDEL;BAVGPOST=0.987;BRSQ=0.673;LDAF=0.0194;AVGPOST=0.9881;RSQ=0.7302;ERATE=0.0032;THETA=0.0136;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 28112854 rs112339236 A AT 12906 PASS INDEL;BAVGPOST=0.957;BRSQ=0.826;LDAF=0.1849;AVGPOST=0.9589;RSQ=0.8709;ERATE=0.0069;THETA=0.0310;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 28112855 rs11461263 A AT 9613 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1166;AVGPOST=0.9943;RSQ=0.9798;ERATE=0.0004;THETA=0.0008;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 28113096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6273;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28113118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.9647;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0002;THETA=0.0005;AC=2107;AN=2184 GT:DS:GL:BD 0.96474361 1
1 28113129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0251;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0001;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 28113146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8540;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28113158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9682;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28113179 . TG T 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28113292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6493;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28113380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5704;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28113412 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7286;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28113487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28113582 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1382;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 28113650 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0890;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0002;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 28113664 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8676;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28113712 . G GA 120 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6011;ERATE=0.0008;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28113723 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1136;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0002;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 28113797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28113847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28113889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28113898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28113940 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28114007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28114023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28114074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28114174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28114247 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28114256 rs61140207 AG A 10877 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1137;AVGPOST=0.9983;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 28114414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7766;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28114418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28114524 . TG T 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5856;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28114608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6860;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28114783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6921;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28114814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28114907 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5016;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28115002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28115046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1375;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 28115050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0002;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 28115143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28115288 . GTCTC G 1415 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0130;AVGPOST=0.9979;RSQ=0.9338;ERATE=0.0004;THETA=0.0016;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 28115365 . TCTC T 613 PASS INDEL;BAVGPOST=0.947;BRSQ=0.273;LDAF=0.0967;AVGPOST=0.9047;RSQ=0.5786;ERATE=0.0017;THETA=0.0006;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 28115370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1957;AVGPOST=0.9973;RSQ=0.9947;ERATE=0.0020;THETA=0.0002;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 28115375 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28115382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28115499 . T TC 157 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7683;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28115501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28115502 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28115578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5833;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 28115584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9104;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28115678 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28115711 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28115777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9399;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28115787 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28115788 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3698;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 28115847 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28115937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9478;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28116042 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28116075 . CT C 206 PASS INDEL;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7078;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28116147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28116163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8616;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28116240 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8522;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28116273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8105;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28116319 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1007;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 28116329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28116333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8842;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28116347 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28116504 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28116582 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28116662 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1380;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0002;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 28116809 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28116861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7363;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1607;AN=2184 GT:DS:GL:BD 0.73580587 1
1 28116883 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9165;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28116938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7340;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28116988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28116999 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0002;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 28117046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9913;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0002;THETA=0.0003;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 28117134 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9328;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28117258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0090;AVGPOST=0.9961;RSQ=0.8189;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28117271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3486;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 28117293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0085;AVGPOST=0.9979;RSQ=0.9010;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28117346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0055;AVGPOST=0.9968;RSQ=0.7854;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28117413 . CAA C 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5298;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28117425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6397;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28117493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0039;AVGPOST=0.9955;RSQ=0.5927;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28117599 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28117752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7926;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28117833 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1387;AVGPOST=0.9968;RSQ=0.9905;ERATE=0.0009;THETA=0.0003;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 28117844 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28117870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0842;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 28117905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8396;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28117971 . T TTA 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7109;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28117991 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28118043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0218;AVGPOST=0.9982;RSQ=0.9674;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 28118076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28118084 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.839;LDAF=0.0185;AVGPOST=0.9958;RSQ=0.9173;ERATE=0.0007;THETA=0.0029;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 28120898 . A AT 156 PASS INDEL;BAVGPOST=0.989;BRSQ=0.508;LDAF=0.0194;AVGPOST=0.9846;RSQ=0.6947;ERATE=0.0013;THETA=0.0073;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 28120898 . A ATAG 1276 PASS INDEL;BAVGPOST=0.997;BRSQ=0.807;LDAF=0.0088;AVGPOST=0.9976;RSQ=0.8810;ERATE=0.0005;THETA=0.0056;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28120900 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.723;LDAF=0.0260;AVGPOST=0.9908;RSQ=0.8763;ERATE=0.0007;THETA=0.0074;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 28120901 . A AGAGT 377 PASS INDEL;BAVGPOST=0.452;BRSQ=0.009;LDAF=0.1523;AVGPOST=0.7415;RSQ=0.1391;ERATE=0.0046;THETA=0.0124;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 28122486 . CT C 706 PASS INDEL;BAVGPOST=0.967;BRSQ=0.288;LDAF=0.0441;AVGPOST=0.9333;RSQ=0.3346;ERATE=0.0075;THETA=0.0199;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 28123436 . G GTA 179 PASS INDEL;BAVGPOST=0.986;BRSQ=0.469;LDAF=0.0239;AVGPOST=0.9674;RSQ=0.3959;ERATE=0.0046;THETA=0.0150;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28128402 . GA G 5644 PASS INDEL;BAVGPOST=0.436;BRSQ=0.114;LDAF=0.6016;AVGPOST=0.6025;RSQ=0.2835;ERATE=0.0202;THETA=0.0020;AC=1559;AN=2184 GT:DS:GL:BD 0.71382785 1
1 28128458 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.520;LDAF=0.0208;AVGPOST=0.9781;RSQ=0.6144;ERATE=0.0041;THETA=0.0058;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28132235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.8130;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28132247 . CA C 560 PASS INDEL;BAVGPOST=0.993;BRSQ=0.499;LDAF=0.0091;AVGPOST=0.9899;RSQ=0.5560;ERATE=0.0008;THETA=0.0073;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28132627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28132644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0002;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 28132645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8613;ERATE=0.0015;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28132656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28132784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0006;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28132882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28132974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28132990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28133049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28133066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28133172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7343;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28133183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0002;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 28133196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28133285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4189;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28133380 . A AGGG 368 PASS INDEL;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4990;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28133383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28133562 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1810;AVGPOST=0.9961;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 28133592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28133601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0730;AVGPOST=0.9991;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 28133627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28133640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0741;AVGPOST=0.9957;RSQ=0.9765;ERATE=0.0008;THETA=0.0006;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 28133733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7992;ERATE=0.0003;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28133740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9569;ERATE=0.0004;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28133861 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0089;AVGPOST=0.9994;RSQ=0.9718;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28133901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0734;AVGPOST=0.9983;RSQ=0.9903;ERATE=0.0004;THETA=0.0006;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 28133930 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8654;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28134100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0002;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28134113 . CCT C 304 PASS INDEL;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.8068;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28134185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28134192 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28134258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0002;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28134262 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0231;AVGPOST=0.9994;RSQ=0.9878;ERATE=0.0004;THETA=0.0009;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 28134480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8138;ERATE=0.0004;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28134516 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1229;AVGPOST=0.9983;RSQ=0.9935;ERATE=0.0008;THETA=0.0009;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 28134626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9475;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28134665 . TGGG T 526 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9289;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28134711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28134766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6582;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28134798 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0360;AVGPOST=0.9979;RSQ=0.9786;ERATE=0.0003;THETA=0.0009;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 28134810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0727;AVGPOST=0.9991;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 28134866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0316;AVGPOST=0.9996;RSQ=0.9946;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 28134977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0315;AVGPOST=0.9997;RSQ=0.9952;ERATE=0.0002;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 28135004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28135007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28135139 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8726;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28135141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.711;LDAF=0.0067;AVGPOST=0.9938;RSQ=0.6460;ERATE=0.0022;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28135149 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9996;RSQ=0.9306;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28135303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 28135317 . TC T 2372 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9977;RSQ=0.9424;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28135383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.757;LDAF=0.0108;AVGPOST=0.9915;RSQ=0.6756;ERATE=0.0075;THETA=0.0035;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28135445 . G GT 175 PASS INDEL;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6453;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28135472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8278;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28135511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28135515 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0727;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0002;THETA=0.0008;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 28135524 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0054;AVGPOST=0.9981;RSQ=0.8378;ERATE=0.0008;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28135528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.896;LDAF=0.0165;AVGPOST=0.9960;RSQ=0.9061;ERATE=0.0004;THETA=0.0017;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 28135612 . ACT A 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6905;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28135627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 28135644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28135652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9617;ERATE=0.0002;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28135685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28135948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.8786;AVGPOST=0.9968;RSQ=0.9911;ERATE=0.0008;THETA=0.0005;AC=1918;AN=2184 GT:DS:GL:BD 0.87820512 1
1 28135962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9699;ERATE=0.0003;THETA=0.0033;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28136023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6672;ERATE=0.0004;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28136024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.960;LDAF=0.6226;AVGPOST=0.9631;RSQ=0.9456;ERATE=0.0186;THETA=0.0009;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 28136038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0204;AVGPOST=0.9994;RSQ=0.9888;ERATE=0.0002;THETA=0.0013;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 28136047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28136093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0260;AVGPOST=0.9990;RSQ=0.9828;ERATE=0.0004;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 28136137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9097;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28136182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.0765;AVGPOST=0.9923;RSQ=0.9669;ERATE=0.0024;THETA=0.0029;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 28136198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5787;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28136286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.743;LDAF=0.0050;AVGPOST=0.9954;RSQ=0.6289;ERATE=0.0013;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28136389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0228;AVGPOST=0.9949;RSQ=0.9137;ERATE=0.0006;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 28136395 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28136516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28136546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0729;AVGPOST=0.9985;RSQ=0.9913;ERATE=0.0002;THETA=0.0005;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 28136594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28136645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28136670 . A AC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6584;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28136736 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0132;AVGPOST=0.9952;RSQ=0.8607;ERATE=0.0006;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28136776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8452;ERATE=0.0008;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28136848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8248;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28136868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8150;ERATE=0.0002;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28136936 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6280;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28137126 . A AC 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3862;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28137135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7236;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28137165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28137169 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28137209 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28137247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0047;AVGPOST=0.9971;RSQ=0.7476;ERATE=0.0004;THETA=0.0051;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28137323 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28137335 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6291;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28137347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9758;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28137375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28137471 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0186;AVGPOST=0.9985;RSQ=0.9707;ERATE=0.0003;THETA=0.0016;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 28137517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9729;ERATE=0.0012;THETA=0.0049;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28137544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6874;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28137720 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8662;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28137743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28137969 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7960;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0004;THETA=0.0008;AC=1739;AN=2184 GT:DS:GL:BD 0.79624540 1
1 28138033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6382;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28138119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5546;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28138174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.620;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6589;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28138254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6754;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28138294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0154;AVGPOST=0.9988;RSQ=0.9708;ERATE=0.0004;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 28138333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6868;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28138397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7998;AVGPOST=0.9951;RSQ=0.9873;ERATE=0.0007;THETA=0.0015;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 28138465 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0061;AVGPOST=0.9977;RSQ=0.8544;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28138500 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0178;AVGPOST=0.9957;RSQ=0.9017;ERATE=0.0007;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 28138502 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5500;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28138517 . C CA 277 PASS INDEL;BAVGPOST=0.906;BRSQ=0.290;LDAF=0.1410;AVGPOST=0.8122;RSQ=0.3619;ERATE=0.0210;THETA=0.0007;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 28138525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0068;AVGPOST=0.9944;RSQ=0.6449;ERATE=0.0012;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28138638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5031;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28138666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9982;RSQ=0.9050;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28138977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4684;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28139039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28139124 . C CA 356 PASS INDEL;BAVGPOST=0.996;BRSQ=0.725;LDAF=0.0115;AVGPOST=0.9892;RSQ=0.6216;ERATE=0.0020;THETA=0.0044;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28139144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0014;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28139409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0027;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28139410 . TC T 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28139537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28139565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28139574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28139749 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9820;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 28139855 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9686;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28139862 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28139875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28139925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0003;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28139962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28140054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9568;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28140117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6767;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28140221 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9649;ERATE=0.0003;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28140228 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5467;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28140309 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28140495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28140522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9771;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28140632 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28140683 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9987;RSQ=0.9222;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28140818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9363;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28140819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4216;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28140888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.701;LDAF=0.0077;AVGPOST=0.9977;RSQ=0.8690;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28140904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28140922 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5636;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28141015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6230;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28141193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5738;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28141232 . C CT 633 PASS INDEL;BAVGPOST=0.853;BRSQ=0.287;LDAF=0.1976;AVGPOST=0.7500;RSQ=0.3289;ERATE=0.0380;THETA=0.0007;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 28141267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.708;LDAF=0.0102;AVGPOST=0.9903;RSQ=0.6210;ERATE=0.0011;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28141295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.947;LDAF=0.1404;AVGPOST=0.9883;RSQ=0.9586;ERATE=0.0007;THETA=0.0006;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 28141300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6136;ERATE=0.0006;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28141336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0207;AVGPOST=0.9929;RSQ=0.8660;ERATE=0.0006;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 28141505 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6527;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28141622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5354;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28141687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7166;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28141740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28141748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0045;AVGPOST=0.9929;RSQ=0.4384;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28141814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0072;AVGPOST=0.9971;RSQ=0.8394;ERATE=0.0005;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28141821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6521;ERATE=0.0004;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28141845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3959;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28141946 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0070;AVGPOST=0.9981;RSQ=0.8811;ERATE=0.0005;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28142059 . ACT A 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.4221;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28142195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.937;LDAF=0.2289;AVGPOST=0.9875;RSQ=0.9751;ERATE=0.0004;THETA=0.0004;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 28142215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28142253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28142595 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0056;AVGPOST=0.9923;RSQ=0.4851;ERATE=0.0007;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28142716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8151;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28142739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28142872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5945;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0007;THETA=0.0010;AC=1300;AN=2184 GT:DS:GL:BD 0.59523809 1
1 28142903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.866;LDAF=0.8848;AVGPOST=0.9742;RSQ=0.9196;ERATE=0.0012;THETA=0.0007;AC=1937;AN=2184 GT:DS:GL:BD 0.88690478 1
1 28143024 rs57897298 G GTA 30510 PASS INDEL;BAVGPOST=0.962;BRSQ=0.925;LDAF=0.2752;AVGPOST=0.9598;RSQ=0.9335;ERATE=0.0079;THETA=0.0003;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 28143042 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28143094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28143337 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5827;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0004;THETA=0.0007;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 28143358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28143438 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9456;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28143540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9896;AVGPOST=0.9992;RSQ=0.9670;ERATE=0.0003;THETA=0.0006;AC=2162;AN=2184 GT:DS:GL:BD 0.98992676 1
1 28143545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28143722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9634;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28143745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28143762 . T TG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0027;AVGPOST=0.9957;RSQ=0.3807;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28143851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 28143922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6923;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28143998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28144024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5964;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=1302;AN=2184 GT:DS:GL:BD 0.59615386 1
1 28144122 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28144178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28144209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7429;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28144243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5580;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28144252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4063;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 28144253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7116;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28144345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5816;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28144374 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2596;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0006;THETA=0.0010;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 28144427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5045;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28144465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28144611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0112;AVGPOST=0.9991;RSQ=0.9705;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28144632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4034;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0010;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 28144785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7660;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28144882 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28144926 rs35237098 C CT 40181 PASS INDEL;BAVGPOST=0.985;BRSQ=0.976;LDAF=0.4013;AVGPOST=0.9908;RSQ=0.9866;ERATE=0.0016;THETA=0.0006;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 28145020 . T TC 7497 PASS INDEL;BAVGPOST=0.956;BRSQ=0.919;LDAF=0.3584;AVGPOST=0.9421;RSQ=0.9161;ERATE=0.0054;THETA=0.0005;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 28145023 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28145037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0216;AVGPOST=0.9994;RSQ=0.9886;ERATE=0.0003;THETA=0.0044;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 28145165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.3496;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28145181 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28145193 . AG A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6359;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28145204 . AAGAG A 586 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9463;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28145208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0055;AVGPOST=0.9995;RSQ=0.9549;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28145231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28145315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5678;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28145373 . CT C 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4653;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28145708 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7238;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28145796 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0176;AVGPOST=0.9991;RSQ=0.9789;ERATE=0.0003;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 28145833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9980;RSQ=0.9568;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28145877 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4061;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0005;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 28146029 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6031;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28146098 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28146102 . TC T 400 PASS INDEL;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7764;ERATE=0.0007;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28146120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 28146318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0058;AVGPOST=0.9971;RSQ=0.8063;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28146346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3232;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 28146350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0110;AVGPOST=0.9992;RSQ=0.9747;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28146365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2590;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 28146406 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28146429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.963;LDAF=0.1858;AVGPOST=0.9827;RSQ=0.9592;ERATE=0.0005;THETA=0.0005;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 28146484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28146508 . GA G 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28146527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28146643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7563;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28146690 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28146705 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5260;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28146715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28146806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9154;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28146939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4037;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 28147070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8435;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28147127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28147216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 28147332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0800;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 28147342 . TAAAC T 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5064;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28147420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3025;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 28147431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8909;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28147443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4053;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 28147493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0163;AVGPOST=0.9982;RSQ=0.9594;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 28147520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3240;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0003;THETA=0.0010;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 28147615 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28147654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28147734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7865;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0005;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 28147753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28147887 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28147954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28147967 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8478;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1851;AN=2184 GT:DS:GL:BD 0.84752744 1
1 28147994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28148024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7865;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0004;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 28148188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28148255 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7865;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 28148375 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0117;AVGPOST=0.9980;RSQ=0.9358;ERATE=0.0008;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28148412 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8489;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0004;THETA=0.0007;AC=1853;AN=2184 GT:DS:GL:BD 0.84844321 1
1 28148459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8211;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28148599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.9816;AVGPOST=0.9979;RSQ=0.9568;ERATE=0.0005;THETA=0.0005;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 28148623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28148635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7866;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0010;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 28148663 . CCTT C 189 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28148684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28148702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0004;THETA=0.0011;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 28148712 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8484;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=1853;AN=2184 GT:DS:GL:BD 0.84844321 1
1 28148773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28148813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28148831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 28148832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7864;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 28148840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28149100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7865;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0004;THETA=0.0007;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 28149135 rs5777858 T TAAG 162417 PASS INDEL;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.9230;AVGPOST=0.9941;RSQ=0.9691;ERATE=0.0012;THETA=0.0011;AC=2017;AN=2184 GT:DS:GL:BD 0.92353481 1
1 28149308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9237;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0007;AC=2017;AN=2184 GT:DS:GL:BD 0.92353481 1
1 28149420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9237;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2017;AN=2184 GT:DS:GL:BD 0.92353481 1
1 28149625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28149713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28149731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7867;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0005;THETA=0.0008;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 28149850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8687;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28149934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0713;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0009;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 28149941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7864;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0004;THETA=0.0008;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 28149985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7844;AVGPOST=0.9968;RSQ=0.9929;ERATE=0.0010;THETA=0.0009;AC=1714;AN=2184 GT:DS:GL:BD 0.78479856 1
1 28150101 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7538;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28150256 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9473;ERATE=0.0003;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28150540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7375;ERATE=0.0013;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28150795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28150856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 28150882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.931;LDAF=0.0216;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0004;THETA=0.0025;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 28150900 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0713;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0007;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 28150993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28150997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0313;AVGPOST=0.9995;RSQ=0.9932;ERATE=0.0004;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 28151043 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0009;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 28151105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0624;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 28151202 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7865;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 28151211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28151220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28151347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9775;ERATE=0.0003;THETA=0.0021;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28151356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151453 . CTGT C 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3512;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151507 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0242;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0008;THETA=0.0011;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 28151564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28151569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 28151709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28151715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9254;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28151739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9389;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28151749 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2322;AVGPOST=0.9974;RSQ=0.9937;ERATE=0.0007;THETA=0.0007;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 28151849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6947;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28151892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9005;ERATE=0.0012;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28152068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28152077 . CT C 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3913;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28152185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0713;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 28152292 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0562;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0008;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 28152657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7058;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28152967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8179;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28153052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9986;RSQ=0.1922;ERATE=0.0004;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28153119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9639;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0010;AC=2105;AN=2184 GT:DS:GL:BD 0.96382785 1
1 28153205 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0177;AVGPOST=0.9968;RSQ=0.9300;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 28153212 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.762;LDAF=0.0086;AVGPOST=0.9950;RSQ=0.7829;ERATE=0.0005;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28153275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.968;LDAF=0.3742;AVGPOST=0.9489;RSQ=0.9130;ERATE=0.0033;THETA=0.0006;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 28153534 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.427;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.4682;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28153730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0155;AVGPOST=0.9977;RSQ=0.9376;ERATE=0.0005;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28153972 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.590;LDAF=0.0033;AVGPOST=0.9958;RSQ=0.4935;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28154248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.468;LDAF=0.0034;AVGPOST=0.9966;RSQ=0.5881;ERATE=0.0007;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28154298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7949;ERATE=0.0003;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28154392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28154540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9991;RSQ=0.9719;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28154607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28154647 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0471;AVGPOST=0.9988;RSQ=0.9879;ERATE=0.0003;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 28155005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8850;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28155204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8441;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28155294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0257;AVGPOST=0.9992;RSQ=0.9880;ERATE=0.0004;THETA=0.0009;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 28155385 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.855;LDAF=0.0090;AVGPOST=0.9970;RSQ=0.8571;ERATE=0.0003;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28155502 . AT A 1407 PASS INDEL;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0130;AVGPOST=0.9981;RSQ=0.9345;ERATE=0.0006;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 28155523 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5695;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28155557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9586;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28155663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9052;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28155669 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8840;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28155763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0208;AVGPOST=0.9991;RSQ=0.9845;ERATE=0.0003;THETA=0.0014;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 28155997 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9084;ERATE=0.0003;THETA=0.0067;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28156011 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2128;AVGPOST=0.9940;RSQ=0.9865;ERATE=0.0004;THETA=0.0019;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 28156055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5115;AVGPOST=0.9913;RSQ=0.9867;ERATE=0.0020;THETA=0.0056;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 28156122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0003;THETA=0.0044;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28156223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0776;AVGPOST=0.9966;RSQ=0.9869;ERATE=0.0003;THETA=0.0006;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 28156420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0274;AVGPOST=0.9984;RSQ=0.9772;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 28156570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4484;ERATE=0.0006;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28156585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28156609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9516;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28156657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28156721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28156732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1806;AVGPOST=0.9949;RSQ=0.9879;ERATE=0.0007;THETA=0.0005;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 28156739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28156805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8006;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28156829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5320;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28156923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7394;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28157023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8267;ERATE=0.0005;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28157192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28157403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0542;AVGPOST=0.9989;RSQ=0.9911;ERATE=0.0005;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 28157417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9157;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28157520 . TTGGGC T 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28157579 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1156;AVGPOST=0.9977;RSQ=0.9908;ERATE=0.0003;THETA=0.0005;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 28157685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28157766 . A AAC 48 PASS INDEL;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8755;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28157780 . A ACAC 532 PASS INDEL;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7171;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28157781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0193;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 28157824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5590;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28157844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28158224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0467;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0010;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 28158317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28158388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28158497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28158544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4262;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28158586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28158651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5261;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28158875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28159110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7656;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28159111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6071;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28159127 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0004;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28159208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9025;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28159390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7801;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28159410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28159443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.8071;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28159541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0117;AVGPOST=0.9986;RSQ=0.9680;ERATE=0.0003;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28159626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28159652 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7853;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28159687 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0005;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28159718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28159730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9336;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28159773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6265;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28159867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0114;AVGPOST=0.9987;RSQ=0.9555;ERATE=0.0004;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28160056 . ACT A 1314 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0115;AVGPOST=0.9988;RSQ=0.9590;ERATE=0.0004;THETA=0.0013;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28160328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28160428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28160515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8868;ERATE=0.0004;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28160530 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28160658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7048;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28160815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28160848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0160;AVGPOST=0.9997;RSQ=0.9902;ERATE=0.0003;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 28161056 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4908;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28161068 . G GA 1811 PASS INDEL;BAVGPOST=0.946;BRSQ=0.619;LDAF=0.1025;AVGPOST=0.9064;RSQ=0.5799;ERATE=0.0419;THETA=0.0010;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 28161176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2684;ERATE=0.0004;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28161251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7621;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28161308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0004;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28161314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9225;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28161382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.959;LDAF=0.0275;AVGPOST=0.9955;RSQ=0.9365;ERATE=0.0006;THETA=0.0012;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 28161383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.581;LDAF=0.0051;AVGPOST=0.9923;RSQ=0.4324;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28161707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0078;AVGPOST=0.9963;RSQ=0.8077;ERATE=0.0006;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28161765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0075;AVGPOST=0.9978;RSQ=0.8692;ERATE=0.0005;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28161804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.586;LDAF=0.0038;AVGPOST=0.9960;RSQ=0.5707;ERATE=0.0006;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28161893 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28162003 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9753;ERATE=0.0007;THETA=0.0015;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 28162134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28162156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9680;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28162186 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28162228 . CTATTA C 981 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9038;ERATE=0.0004;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28162436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7458;ERATE=0.0005;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28162440 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0771;AVGPOST=0.9977;RSQ=0.9875;ERATE=0.0003;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 28162518 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 28162592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6068;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28162673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0168;AVGPOST=0.9984;RSQ=0.9549;ERATE=0.0005;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 28162695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.7981;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28163002 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28163056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28163142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0183;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 28163195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28163237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28163598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9783;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28163634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9085;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28163672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9729;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28163719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0600;AVGPOST=0.9989;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 28163840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0374;AVGPOST=0.9944;RSQ=0.9417;ERATE=0.0005;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 28163874 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28163906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5548;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28164014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0086;AVGPOST=0.9949;RSQ=0.7743;ERATE=0.0007;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28164091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.975;LDAF=0.5016;AVGPOST=0.9707;RSQ=0.9621;ERATE=0.0035;THETA=0.0007;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 28164167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0046;AVGPOST=0.9950;RSQ=0.5708;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28164187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.662;LDAF=0.0042;AVGPOST=0.9959;RSQ=0.5854;ERATE=0.0013;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28164273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9902;ERATE=0.0004;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 28164514 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28164543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5170;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=1130;AN=2184 GT:DS:GL:BD 0.51739925 1
1 28164647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28164761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28164837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28164860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0017;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28164962 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28165071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 28165101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8437;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28165190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28165234 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28165298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28165299 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28165391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28165570 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28165718 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9886;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 28165722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28165736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28165789 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28165869 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28166069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28166107 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28166181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28166344 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6626;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28166410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28166416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28166426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28166499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0091;AVGPOST=0.9958;RSQ=0.8288;ERATE=0.0013;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28166934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0481;AVGPOST=0.9989;RSQ=0.9905;ERATE=0.0004;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 28166947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9873;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28166948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0160;AVGPOST=0.9992;RSQ=0.9812;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 28166976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7875;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28167200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28167235 . G GCTC 2149 PASS INDEL;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0214;AVGPOST=0.9967;RSQ=0.9346;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 28167255 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6791;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28167546 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0121;AVGPOST=0.9962;RSQ=0.8975;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28167634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3127;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 28167916 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4562;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28167918 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0136;AVGPOST=0.9990;RSQ=0.9740;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28167971 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9878;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28168183 . TG T 6 PASS INDEL;BAVGPOST=0.998;BRSQ=0.449;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5588;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28168221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28168247 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2550;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0005;THETA=0.0014;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 28168443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28168448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9996;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 28168486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8843;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28168489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28168564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28168603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0150;AVGPOST=0.9987;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28168635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4629;AVGPOST=0.9963;RSQ=0.9946;ERATE=0.0007;THETA=0.0002;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28168705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.598;LDAF=0.0060;AVGPOST=0.9954;RSQ=0.7035;ERATE=0.0006;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28168757 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8558;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28168844 rs72203944 TATAA T 23377 PASS INDEL;BAVGPOST=0.891;BRSQ=0.642;LDAF=0.8154;AVGPOST=0.8931;RSQ=0.7305;ERATE=0.0082;THETA=0.0006;AC=1801;AN=2184 GT:DS:GL:BD 0.82463372 1
1 28168996 rs72203944 TAA T 24193 PASS INDEL;BAVGPOST=0.936;BRSQ=0.743;LDAF=0.8541;AVGPOST=0.9342;RSQ=0.8158;ERATE=0.0028;THETA=0.0002;AC=1869;AN=2184 GT:DS:GL:BD 0.85576922 1
1 28168998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8812;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28169078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8138;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28169246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4630;AVGPOST=0.9965;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 28169266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28169287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28169415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9679;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28169416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9717;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28169668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9291;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28169845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28169857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8040;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=1756;AN=2184 GT:DS:GL:BD 0.80402929 1
1 28169883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4614;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0004;THETA=0.0008;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28169894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 28169929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0338;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 28169959 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0445;AVGPOST=0.9992;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 28169996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28170070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0095;AVGPOST=0.9955;RSQ=0.8388;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28170079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0537;AVGPOST=0.9976;RSQ=0.9794;ERATE=0.0003;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 28170101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4615;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28170148 . CAGA C 38974 PASS INDEL;BAVGPOST=0.948;BRSQ=0.919;LDAF=0.4255;AVGPOST=0.9624;RSQ=0.9508;ERATE=0.0015;THETA=0.0005;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 28170259 . AATAT A 17958 PASS INDEL;BAVGPOST=0.947;BRSQ=0.919;LDAF=0.4258;AVGPOST=0.9662;RSQ=0.9561;ERATE=0.0005;THETA=0.0003;AC=937;AN=2184 GT:DS:GL:BD 0.42902932 0
1 28170263 rs66638411 AT A 26617 PASS INDEL;BAVGPOST=0.947;BRSQ=0.919;LDAF=0.4265;AVGPOST=0.9617;RSQ=0.9498;ERATE=0.0013;THETA=0.0007;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 28170266 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4599;AVGPOST=0.9957;RSQ=0.9936;ERATE=0.0009;THETA=0.0003;AC=1004;AN=2184 GT:DS:GL:BD 0.45970696 0
1 28170437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4144;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 28170500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7761;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28170610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4616;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0005;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28170623 rs59771823 GT G 38 PASS INDEL;BAVGPOST=0.985;BRSQ=0.443;LDAF=0.0276;AVGPOST=0.9605;RSQ=0.4165;ERATE=0.0050;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28170809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28170911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0057;AVGPOST=0.9971;RSQ=0.8116;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28170942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28170944 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.4584;AVGPOST=0.9927;RSQ=0.9903;ERATE=0.0018;THETA=0.0004;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 28170969 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9410;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28171014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.980;LDAF=0.4593;AVGPOST=0.9960;RSQ=0.9942;ERATE=0.0004;THETA=0.0009;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 28171021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5033;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28171037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28171077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28171095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4619;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0011;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28171099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4613;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28171123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4615;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28171171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5713;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28171294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6813;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28171306 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4615;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0007;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28171489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4606;AVGPOST=0.9971;RSQ=0.9957;ERATE=0.0008;THETA=0.0004;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28171570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2553;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 28171793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28171830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4614;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28171895 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4605;AVGPOST=0.9972;RSQ=0.9964;ERATE=0.0005;THETA=0.0007;AC=1007;AN=2184 GT:DS:GL:BD 0.46108058 0
1 28171903 . ATC A 11082 PASS INDEL;BAVGPOST=0.965;BRSQ=0.939;LDAF=0.4402;AVGPOST=0.9597;RSQ=0.9435;ERATE=0.0080;THETA=0.0002;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 28172085 rs72504023 TCTC T 54945 PASS INDEL;BAVGPOST=0.974;BRSQ=0.958;LDAF=0.4565;AVGPOST=0.9904;RSQ=0.9868;ERATE=0.0011;THETA=0.0005;AC=1002;AN=2184 GT:DS:GL:BD 0.45879120 0
1 28172086 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4601;AVGPOST=0.9973;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 28172101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7397;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28172190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5922;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28172256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9444;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28172372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4614;AVGPOST=0.9985;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 28172377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4620;AVGPOST=0.9912;RSQ=0.9875;ERATE=0.0040;THETA=0.0033;AC=1009;AN=2184 GT:DS:GL:BD 0.46199635 0
1 28172763 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.951;LDAF=0.4425;AVGPOST=0.9754;RSQ=0.9678;ERATE=0.0010;THETA=0.0003;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 28172853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.947;LDAF=0.4404;AVGPOST=0.9787;RSQ=0.9714;ERATE=0.0008;THETA=0.0015;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 28172877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.445;LDAF=0.0201;AVGPOST=0.9846;RSQ=0.7190;ERATE=0.0006;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 28172938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.963;LDAF=0.4562;AVGPOST=0.9893;RSQ=0.9853;ERATE=0.0008;THETA=0.0034;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 28172975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.4592;AVGPOST=0.9905;RSQ=0.9869;ERATE=0.0008;THETA=0.0041;AC=1000;AN=2184 GT:DS:GL:BD 0.45787546 0
1 28173043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8494;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28173071 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9236;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28173081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9461;ERATE=0.0003;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28173117 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0032;AVGPOST=0.9959;RSQ=0.5464;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28173270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7597;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28173325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0121;AVGPOST=0.9981;RSQ=0.9385;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28173348 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9600;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28173359 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28173367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0878;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28173549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28173557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28173558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28173578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0878;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0006;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28173648 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28173710 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28173725 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28173740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8824;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28173752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28173797 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9998;RSQ=0.7669;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28173805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28173832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28173840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8920;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28174156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8877;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28174231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28174247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0362;AVGPOST=0.9988;RSQ=0.9878;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 28174249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9811;ERATE=0.0002;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28174285 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4239;AVGPOST=0.9967;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=925;AN=2184 GT:DS:GL:BD 0.42353481 0
1 28174347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9094;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28174359 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28174450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28174471 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28174474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0677;AVGPOST=0.9981;RSQ=0.9904;ERATE=0.0002;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 28174569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.0829;AVGPOST=0.9946;RSQ=0.9726;ERATE=0.0005;THETA=0.0005;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 28174681 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0879;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28174718 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0878;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0002;THETA=0.0005;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28174786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28174805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9650;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28174870 . GA G 325 PASS INDEL;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0054;AVGPOST=0.9944;RSQ=0.5795;ERATE=0.0010;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28174874 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0262;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0004;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 28174902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1002;AVGPOST=0.9974;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 28174960 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28175020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.9023;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28175105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0881;AVGPOST=0.9985;RSQ=0.9943;ERATE=0.0005;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28175177 . AC A 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6960;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28175253 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28175304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4105;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28175451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0885;AVGPOST=0.9954;RSQ=0.9823;ERATE=0.0006;THETA=0.0015;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 28175459 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0238;AVGPOST=0.9988;RSQ=0.9798;ERATE=0.0004;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28175549 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0239;AVGPOST=0.9990;RSQ=0.9830;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28175550 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28175604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0881;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0006;THETA=0.0007;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28175712 . ATTTTT A 552 PASS INDEL;BAVGPOST=0.831;BRSQ=0.205;LDAF=0.1084;AVGPOST=0.8920;RSQ=0.5715;ERATE=0.0021;THETA=0.0004;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 28175718 . T TGAAAA 598 PASS INDEL;BAVGPOST=0.905;BRSQ=0.392;LDAF=0.1065;AVGPOST=0.9018;RSQ=0.6103;ERATE=0.0061;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 28175722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.961;LDAF=0.0883;AVGPOST=0.9978;RSQ=0.9911;ERATE=0.0005;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28176040 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0128;AVGPOST=0.9979;RSQ=0.9332;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28176087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28176111 . TAC T 90 PASS INDEL;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7682;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28176147 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28176215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0881;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28176248 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0907;AVGPOST=0.9964;RSQ=0.9875;ERATE=0.0005;THETA=0.0006;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 28176338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0878;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0009;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28176421 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9996;RSQ=0.9840;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28176461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5272;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28176490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28176496 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28176627 . GAAAC G 2922 PASS INDEL;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0157;AVGPOST=0.9983;RSQ=0.9569;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28176643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0210;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0002;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 28176718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0673;AVGPOST=0.9982;RSQ=0.9910;ERATE=0.0004;THETA=0.0005;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 28176794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28176812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0880;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28176924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0297;AVGPOST=0.9989;RSQ=0.9859;ERATE=0.0004;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 28177098 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0035;AVGPOST=0.9997;RSQ=0.9665;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28177141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28177156 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9623;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28177216 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28177256 . G GA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5070;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28177339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28177404 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28177416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0878;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0002;THETA=0.0006;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 28177439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0002;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28177477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2682;AVGPOST=0.9980;RSQ=0.9955;ERATE=0.0004;THETA=0.0009;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 28177504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0002;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28177525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28177574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0776;AVGPOST=0.9969;RSQ=0.9836;ERATE=0.0004;THETA=0.0004;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 28177590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0873;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0025;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 28177707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0153;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0002;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28177719 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0874;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0002;THETA=0.0005;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 28177763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0094;AVGPOST=0.9992;RSQ=0.9668;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28177947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28177958 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5980;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28178003 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28178245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28178401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28178424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28178563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0426;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 28178850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2018;AVGPOST=0.9977;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 28178881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2007;AVGPOST=0.9982;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 28178891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9983;RSQ=0.3935;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28178905 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9336;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28178922 . T TTC 213 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0107;AVGPOST=0.9986;RSQ=0.9446;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28178935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0140;AVGPOST=0.9962;RSQ=0.8797;ERATE=0.0008;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 28178937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28179081 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0085;AVGPOST=0.9967;RSQ=0.8551;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28179158 rs17860488 CAT C 41246 PASS INDEL;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3812;AVGPOST=0.9843;RSQ=0.9777;ERATE=0.0041;THETA=0.0005;AC=834;AN=2184 GT:DS:GL:BD 0.38186812 0
1 28179384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28179577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0049;AVGPOST=0.9986;RSQ=0.9027;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28179598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28179599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8794;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28179615 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28179636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2007;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 28179644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4356;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28179650 . AG A 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6649;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28179714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0094;AVGPOST=0.9985;RSQ=0.9475;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28179719 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7920;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 28179771 . CAGG C 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6489;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28179801 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28179833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8218;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28179941 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6725;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28180126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0427;AVGPOST=0.9992;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 28180370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5347;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28180430 . CCTGTGTGCCAGCTG C 8906 PASS INDEL;BAVGPOST=0.987;BRSQ=0.839;LDAF=0.0292;AVGPOST=0.9953;RSQ=0.9454;ERATE=0.0004;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 28180457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.8054;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28180669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.957;LDAF=0.0751;AVGPOST=0.9981;RSQ=0.9883;ERATE=0.0004;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 28180794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.7889;AVGPOST=0.9968;RSQ=0.9920;ERATE=0.0004;THETA=0.0002;AC=1725;AN=2184 GT:DS:GL:BD 0.78983516 1
1 28180809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1574;AVGPOST=0.9965;RSQ=0.9909;ERATE=0.0004;THETA=0.0001;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 28180839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7774;AVGPOST=0.9978;RSQ=0.9945;ERATE=0.0007;THETA=0.0001;AC=1700;AN=2184 GT:DS:GL:BD 0.77838826 1
1 28180873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9395;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28180897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28180924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28180960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28181041 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28181096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6574;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28181099 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28181317 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9739;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28181375 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28181430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7661;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28181506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2015;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0001;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 28181721 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3811;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 28181786 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28181823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9562;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28181996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7473;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28182099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8316;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28182101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28182148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 28182363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28182369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28182418 . CGAA C 406 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8848;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28182516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8148;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28182563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28182582 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0289;AVGPOST=0.9958;RSQ=0.9536;ERATE=0.0003;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 28182804 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0635;AVGPOST=0.9987;RSQ=0.9937;ERATE=0.0002;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 28182864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28183196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5858;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 28183210 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0002;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28183212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28183239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8907;ERATE=0.0003;THETA=0.0035;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28183329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28183361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5229;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28183483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7099;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28183587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5112;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28183619 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9486;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28183851 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.930;LDAF=0.0923;AVGPOST=0.9879;RSQ=0.9530;ERATE=0.0004;THETA=0.0006;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 28183853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.9326;AVGPOST=0.9986;RSQ=0.9914;ERATE=0.0006;THETA=0.0119;AC=2037;AN=2184 GT:DS:GL:BD 0.93269229 1
1 28183916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9769;ERATE=0.0003;THETA=0.0061;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28183950 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.5450;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28184077 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.6711;ERATE=0.0004;THETA=0.0103;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28184209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0099;AVGPOST=0.9989;RSQ=0.9558;ERATE=0.0004;THETA=0.0085;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28184237 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9717;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28184286 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8492;ERATE=0.0004;THETA=0.0093;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28184327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28184880 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28184914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0241;AVGPOST=0.9992;RSQ=0.9883;ERATE=0.0004;THETA=0.0050;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28184978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28185035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0046;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28185172 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.6697;AVGPOST=0.9851;RSQ=0.9744;ERATE=0.0016;THETA=0.0078;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 28185221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7380;ERATE=0.0004;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28185406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0030;AVGPOST=0.9963;RSQ=0.5976;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28185409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.2255;AVGPOST=0.9932;RSQ=0.9853;ERATE=0.0005;THETA=0.0022;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 28185455 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9558;ERATE=0.0003;THETA=0.0034;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28185456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0253;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 28185525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.9729;AVGPOST=0.9985;RSQ=0.9807;ERATE=0.0005;THETA=0.0007;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 28185558 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0004;THETA=0.0046;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28185647 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0086;AVGPOST=0.9989;RSQ=0.9410;ERATE=0.0007;THETA=0.0019;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28185660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6273;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28185681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7384;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28185723 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9417;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28185734 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7467;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28185755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4685;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28185826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6930;AVGPOST=0.9950;RSQ=0.9921;ERATE=0.0008;THETA=0.0007;AC=1513;AN=2184 GT:DS:GL:BD 0.69276559 1
1 28185881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9806;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28185894 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28185985 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0256;AVGPOST=0.9991;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 28186026 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7855;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28186096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5640;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28186134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0259;AVGPOST=0.9994;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 28186182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0275;AVGPOST=0.9986;RSQ=0.9814;ERATE=0.0003;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 28186315 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28186460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28186540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0177;AVGPOST=0.9991;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 28186740 . G GC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4958;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28186810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28186837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28186929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9123;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28187005 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28187021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6703;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=1463;AN=2184 GT:DS:GL:BD 0.66987181 1
1 28187043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2277;AVGPOST=0.9983;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 28187045 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0509;AVGPOST=0.9984;RSQ=0.9868;ERATE=0.0006;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 28187068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28187114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0091;AVGPOST=0.9969;RSQ=0.8719;ERATE=0.0007;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28187172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5032;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28187285 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0510;AVGPOST=0.9993;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 28187332 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28187576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9006;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28187616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0054;AVGPOST=0.9978;RSQ=0.8183;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28187647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5595;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28187876 . CAGA C 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7184;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28187951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9492;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28187978 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9559;AVGPOST=0.9993;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 28188053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0127;AVGPOST=0.9984;RSQ=0.9546;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 28188155 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2106;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 28188319 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5234;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28188374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28188404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0133;AVGPOST=0.9983;RSQ=0.9486;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28188477 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28188518 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7633;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28188614 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1673;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 28188739 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28188798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9096;AVGPOST=0.9990;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 28188953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2092;AVGPOST=0.9980;RSQ=0.9952;ERATE=0.0006;THETA=0.0006;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 28189028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28189099 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5066;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28189196 . TGAA T 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6773;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28189498 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28189535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6461;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28189541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28189712 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8634;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28189784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9089;AVGPOST=0.9991;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=1986;AN=2184 GT:DS:GL:BD 0.90934068 1
1 28189853 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28189888 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28189920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5335;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28190007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28190016 . CCTA C 122 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6225;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28190050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28190100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2131;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 28190129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28190227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8429;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28190257 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4383;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 28190334 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28190383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9794;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28190445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9092;AVGPOST=0.9984;RSQ=0.9925;ERATE=0.0006;THETA=0.0005;AC=1986;AN=2184 GT:DS:GL:BD 0.90934068 1
1 28190518 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2086;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0005;THETA=0.0005;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 28191019 . GTA G 526 PASS INDEL;BAVGPOST=0.953;BRSQ=0.495;LDAF=0.0705;AVGPOST=0.9158;RSQ=0.5433;ERATE=0.0086;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 28191065 rs35225571 GT G 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6210;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28191069 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28191103 rs60650843 ATCTT A 32896 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2586;AVGPOST=0.9880;RSQ=0.9814;ERATE=0.0013;THETA=0.0019;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 28191219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28191236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9466;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28191270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28191307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28191314 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2130;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0004;THETA=0.0004;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 28191348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28191426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2132;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 28191485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28191513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5747;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28191518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28191526 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8956;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28191602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4395;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28191620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2132;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 28191631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28191691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0187;AVGPOST=0.9994;RSQ=0.9865;ERATE=0.0003;THETA=0.0017;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 28191874 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28191893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28191934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9257;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28191959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28191961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28192175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28192176 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28192483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28192503 . T TC 141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28192527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0050;AVGPOST=0.9970;RSQ=0.7512;ERATE=0.0007;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28192576 . C CT 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6004;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28192586 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0185;AVGPOST=0.9988;RSQ=0.9699;ERATE=0.0004;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 28192597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7577;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28192598 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6158;ERATE=0.0013;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28192637 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28192670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9534;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28192735 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0181;AVGPOST=0.9993;RSQ=0.9820;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 28192859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9095;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0004;THETA=0.0007;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 28193006 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6267;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28193087 . AAG A 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6785;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28193128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8276;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28193166 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1675;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 28193302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0263;AVGPOST=0.9976;RSQ=0.9604;ERATE=0.0005;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 28193426 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6702;AVGPOST=0.9957;RSQ=0.9918;ERATE=0.0006;THETA=0.0003;AC=1466;AN=2184 GT:DS:GL:BD 0.67124540 1
1 28193459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28193484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7108;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28193517 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6586;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28193670 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0239;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28193717 . ATTTG A 683 PASS INDEL;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8355;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28193912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0381;AVGPOST=0.9980;RSQ=0.9795;ERATE=0.0003;THETA=0.0014;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 28193960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8752;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28194047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8900;ERATE=0.0003;THETA=0.0037;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28194086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0003;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28194212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9757;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28194238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7029;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28194312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0255;AVGPOST=0.9994;RSQ=0.9902;ERATE=0.0003;THETA=0.0010;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 28194425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28194451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0246;AVGPOST=0.9980;RSQ=0.9729;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 28194460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28194478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28194559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6571;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28194641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28194741 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4728;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28194745 . TGATCCCA T 479 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9753;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28194808 rs78173179 G GCT 7508 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0308;AVGPOST=0.9994;RSQ=0.9911;ERATE=0.0003;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 28194818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4539;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 28194825 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0702;AVGPOST=0.9970;RSQ=0.9815;ERATE=0.0003;THETA=0.0003;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 28195028 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5595;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28195076 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6080;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28195193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28195276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1203;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 28195470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6348;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28195566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8131;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28195600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28195632 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8861;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28195639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0256;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 28195786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9107;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28195879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3702;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=810;AN=2184 GT:DS:GL:BD 0.37087911 0
1 28195885 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28196066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.7037;AVGPOST=0.9971;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 28196141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.970;LDAF=0.1411;AVGPOST=0.9905;RSQ=0.9704;ERATE=0.0006;THETA=0.0003;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 28196183 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1203;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 28196184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28196248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5762;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28196250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9470;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28196434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28196485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28196593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8561;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28196709 . AT A 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6070;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28196850 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7384;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28196927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0241;AVGPOST=0.9993;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 28196998 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8795;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28197079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28197094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9472;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28197227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28197289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5718;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28197671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28197672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28197702 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28197964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28198177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8726;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28198287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8231;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28198304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0054;AVGPOST=0.9973;RSQ=0.7844;ERATE=0.0006;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28198447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.860;LDAF=0.0135;AVGPOST=0.9936;RSQ=0.8226;ERATE=0.0006;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 28198495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0056;AVGPOST=0.9968;RSQ=0.7480;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28198512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8631;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28198515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.821;LDAF=0.0126;AVGPOST=0.9929;RSQ=0.8144;ERATE=0.0007;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28198517 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0097;AVGPOST=0.9941;RSQ=0.7958;ERATE=0.0004;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 28198529 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0135;AVGPOST=0.9923;RSQ=0.7647;ERATE=0.0019;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 28198530 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.889;LDAF=0.3988;AVGPOST=0.8969;RSQ=0.8372;ERATE=0.0274;THETA=0.0062;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 28198548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.550;LDAF=0.0090;AVGPOST=0.9909;RSQ=0.5925;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 28198593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0048;AVGPOST=0.9963;RSQ=0.6852;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28198668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.3196;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28198709 rs71759994 TCA T 3818 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0192;AVGPOST=0.9993;RSQ=0.9846;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 28198866 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7453;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28198919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.7978;ERATE=0.0004;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28199069 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 28199082 . AT A 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.471;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0070;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28199121 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28199133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28199295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.3378;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28199327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7140;ERATE=0.0005;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28199332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5109;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28199420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28199507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28199528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1869;AVGPOST=0.9939;RSQ=0.9859;ERATE=0.0004;THETA=0.0011;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 28199568 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8707;AVGPOST=0.9976;RSQ=0.9903;ERATE=0.0003;THETA=0.0007;AC=1902;AN=2184 GT:DS:GL:BD 0.87087911 1
1 28199735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 28199775 . CT C 424 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9390;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28199859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8031;ERATE=0.0009;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28199884 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28199896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0312;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 28199926 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6681;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28200028 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28200072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.5865;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28200081 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0069;AVGPOST=0.9992;RSQ=0.9624;ERATE=0.0003;THETA=0.0019;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28200108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8432;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28200259 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28200279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0228;AVGPOST=0.9984;RSQ=0.9774;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 28200291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3816;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28200464 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8017;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28200481 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0409;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 28200535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28200546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28200564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0080;AVGPOST=0.9989;RSQ=0.9382;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28200609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0030;AVGPOST=0.9953;RSQ=0.3774;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28200760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.5761;AVGPOST=0.9937;RSQ=0.9884;ERATE=0.0006;THETA=0.0006;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 28200907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9683;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28200914 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.6852;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28200915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6091;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28200964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9819;ERATE=0.0003;THETA=0.0025;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28200966 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28201052 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6332;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28201350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28201371 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6956;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28201535 . AC A 7260 PASS INDEL;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0516;AVGPOST=0.9982;RSQ=0.9870;ERATE=0.0004;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 28201615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5313;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28201631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5290;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28201686 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0314;AVGPOST=0.9993;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 28201713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.810;LDAF=0.0086;AVGPOST=0.9950;RSQ=0.7660;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28201866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6447;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28201902 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28202054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6345;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28202094 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6834;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28202141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28202174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.6408;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28202203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6237;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28202271 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28202388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28202431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28202504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5741;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28202538 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.5798;AVGPOST=0.9974;RSQ=0.9950;ERATE=0.0007;THETA=0.0010;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 28202607 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7883;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28202653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4837;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28202711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8531;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28202774 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28202807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5909;AVGPOST=0.9957;RSQ=0.9925;ERATE=0.0008;THETA=0.0003;AC=1291;AN=2184 GT:DS:GL:BD 0.59111720 1
1 28202909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28203008 . AAAC A 133 PASS INDEL;BAVGPOST=0.996;BRSQ=0.723;LDAF=0.0162;AVGPOST=0.9796;RSQ=0.4943;ERATE=0.0049;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28203023 . A AAAAC 2740 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28203040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28203063 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7280;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28203153 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0126;AVGPOST=0.9990;RSQ=0.9662;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 28203193 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28203199 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5917;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0005;THETA=0.0002;AC=1294;AN=2184 GT:DS:GL:BD 0.59249085 1
1 28203204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28203287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5542;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28203360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9992;RSQ=0.9556;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 28203420 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28203680 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28203700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5724;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28203716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.363;LDAF=0.0145;AVGPOST=0.9837;RSQ=0.5687;ERATE=0.0020;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 28203752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0155;AVGPOST=0.9992;RSQ=0.9750;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 28203756 . T TC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4274;ERATE=0.0005;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28203821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0442;AVGPOST=0.9987;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 28203895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.9113;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 28203943 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1563;AVGPOST=0.9979;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 28203948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6501;AVGPOST=0.9975;RSQ=0.9965;ERATE=0.0004;THETA=0.0011;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 28203994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9996;RSQ=0.9810;ERATE=0.0003;THETA=0.0016;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28203996 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7980;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28204089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8188;ERATE=0.0003;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28204144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28204228 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28204312 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 28204326 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0131;AVGPOST=0.9996;RSQ=0.9902;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 28204331 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0470;AVGPOST=0.9992;RSQ=0.9926;ERATE=0.0003;THETA=0.0009;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 28204458 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28204509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28204583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 28204927 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28204951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28205052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7917;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28205258 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9351;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 28205284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7040;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28205300 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28205309 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5228;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28205380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5289;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28205388 . CAATT C 353 PASS INDEL;BAVGPOST=0.997;BRSQ=0.818;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7637;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28205450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8656;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28205473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0468;AVGPOST=0.9993;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 28205528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7636;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28205561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28205738 . C CA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6462;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28205835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28205894 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5300;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28206121 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28206156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2403;AVGPOST=0.9838;RSQ=0.9665;ERATE=0.0009;THETA=0.0003;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 28206187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0102;AVGPOST=0.9973;RSQ=0.9053;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 28206218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8781;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28206272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 28206301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28206332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8337;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28206370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7295;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28206412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8298;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28206457 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8742;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28206475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0113;AVGPOST=0.9988;RSQ=0.9606;ERATE=0.0003;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28206582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28206601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28206669 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28206671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28206746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8809;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28206751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5009;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28206754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6402;ERATE=0.0006;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28206793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0098;AVGPOST=0.9992;RSQ=0.9639;ERATE=0.0003;THETA=0.0016;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 28206847 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9437;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28206861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28206877 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8374;ERATE=0.0003;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28206938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8889;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28207009 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28207032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0226;AVGPOST=0.9987;RSQ=0.9798;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 28207046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9676;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 28207081 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7350;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28207141 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7747;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28207188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7746;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28207202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28207227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9731;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 28207256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9801;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28207257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28207390 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0044;AVGPOST=0.9976;RSQ=0.7862;ERATE=0.0009;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28207391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28207399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6292;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28207440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28207501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 28207514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 28207544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28207547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28207586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6231;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28207644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28207693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9382;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 28207753 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0496;AVGPOST=0.9978;RSQ=0.9804;ERATE=0.0005;THETA=0.0007;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 28207852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.4043;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28207857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7074;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28207873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8554;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28207947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0196;AVGPOST=0.9968;RSQ=0.9378;ERATE=0.0006;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 28207980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28208023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.0733;AVGPOST=0.9972;RSQ=0.9833;ERATE=0.0003;THETA=0.0016;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 28208067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9642;ERATE=0.0003;THETA=0.0069;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 28208143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8586;ERATE=0.0004;THETA=0.0083;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28208185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0584;AVGPOST=0.9957;RSQ=0.9725;ERATE=0.0005;THETA=0.0061;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 28208229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9994;RSQ=0.9770;ERATE=0.0003;THETA=0.0118;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 28208295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0074;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28208376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0139;AVGPOST=0.9978;RSQ=0.9339;ERATE=0.0006;THETA=0.0112;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 28208525 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0121;AVGPOST=0.9970;RSQ=0.9087;ERATE=0.0003;THETA=0.0108;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 28208576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.541;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7642;ERATE=0.0004;THETA=0.0072;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28208588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.928;LDAF=0.9714;AVGPOST=0.9942;RSQ=0.9274;ERATE=0.0006;THETA=0.0160;AC=2126;AN=2184 GT:DS:GL:BD 0.97344321 1
1 28208622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28208669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4843;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28208689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5855;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28209076 . TA T 83 PASS INDEL;BAVGPOST=0.998;BRSQ=0.506;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4963;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28209107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9272;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28209136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8620;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28209137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8108;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 28209307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28209409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28209418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28209482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5758;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28209521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0102;AVGPOST=0.9993;RSQ=0.9667;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 28209596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7174;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28209672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 28209699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9996;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 28209878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28210025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28210026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8759;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 28210042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.6807;AVGPOST=0.9938;RSQ=0.9890;ERATE=0.0010;THETA=0.0006;AC=1485;AN=2184 GT:DS:GL:BD 0.67994505 1
1 28210076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28210100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1966;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0003;THETA=0.0007;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 28210119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 28210191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28210227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 28210268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6455;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28210351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9953;AVGPOST=0.9990;RSQ=0.9170;ERATE=0.0004;THETA=0.0003;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 28210352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28210427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28210452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 28210483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9557;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28210545 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8909;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28210645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28210646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28210648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28210672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.922;LDAF=0.0789;AVGPOST=0.9774;RSQ=0.8874;ERATE=0.0054;THETA=0.0004;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 28210720 . GGA G 376 PASS INDEL;BAVGPOST=0.976;BRSQ=0.660;LDAF=0.0597;AVGPOST=0.9380;RSQ=0.5543;ERATE=0.0236;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 28210808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28210848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 28210902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5563;AVGPOST=0.9967;RSQ=0.9951;ERATE=0.0006;THETA=0.0010;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 28210903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0179;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 28210925 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7264;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28211026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7215;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28211113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8330;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 28211133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6106;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28211134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8682;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 28211142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 28211263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7230;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 28211310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 28211351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 28211466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5554;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0006;THETA=0.0006;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 28211509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0573;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0