1092
10000
1 77779613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.968;LDAF=0.2548;AVGPOST=0.9927;RSQ=0.9859;ERATE=0.0006;THETA=0.0005;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 77779626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.694;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6741;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77779739 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5236;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77779760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.930;LDAF=0.0490;AVGPOST=0.9951;RSQ=0.9634;ERATE=0.0004;THETA=0.0011;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77779821 . A AG 579 PASS INDEL;BAVGPOST=0.997;BRSQ=0.948;LDAF=0.0187;AVGPOST=0.9945;RSQ=0.8970;ERATE=0.0008;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77779891 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0128;AVGPOST=0.9974;RSQ=0.9144;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77779916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77779943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8557;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77780043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0487;AVGPOST=0.9984;RSQ=0.9839;ERATE=0.0005;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77780271 . TG T 1700 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0409;AVGPOST=0.9972;RSQ=0.9733;ERATE=0.0004;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 77780330 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0964;AVGPOST=0.9980;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 77780413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0480;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77780579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6973;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77780622 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.629;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7106;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77780824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77780947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1007;AVGPOST=0.9970;RSQ=0.9896;ERATE=0.0006;THETA=0.0006;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 77780948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9987;RSQ=0.9641;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77780952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7462;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77780972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0096;AVGPOST=0.9982;RSQ=0.9205;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77780983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9191;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77781007 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0034;AVGPOST=0.9951;RSQ=0.4922;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77781095 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0223;AVGPOST=0.9993;RSQ=0.9876;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77781143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0440;AVGPOST=0.9947;RSQ=0.9543;ERATE=0.0003;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 77781251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6585;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77781267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9664;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77781309 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1265;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0003;THETA=0.0009;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 77781472 . AG A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5857;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77781557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0304;AVGPOST=0.9993;RSQ=0.9894;ERATE=0.0002;THETA=0.0002;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77781607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0934;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0002;THETA=0.0005;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 77781690 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0109;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77781815 . AG A 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4327;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77781884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9825;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77781911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77781933 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0478;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0002;THETA=0.0008;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77781995 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77782004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77782009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6094;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77782013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77782043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6519;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77782126 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77782139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7895;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77782149 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77782226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7466;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77782238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77782295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77782371 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0480;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0002;THETA=0.0006;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77782460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77782543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6443;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77782555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8910;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77782790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1101;AVGPOST=0.9966;RSQ=0.9870;ERATE=0.0003;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77783058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8652;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77783116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77783124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4271;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0006;THETA=0.0003;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 77783329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6855;AVGPOST=0.9961;RSQ=0.9932;ERATE=0.0004;THETA=0.0005;AC=1499;AN=2184 GT:DS:GL:BD 0.68635529 1
1 77783385 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0116;AVGPOST=0.9987;RSQ=0.9522;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77783411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.949;LDAF=0.9701;AVGPOST=0.9893;RSQ=0.8588;ERATE=0.0014;THETA=0.0004;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 77783476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77783629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0045;AVGPOST=0.9997;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77783656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6796;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77783720 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77783779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4840;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77783836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0137;AVGPOST=0.9991;RSQ=0.9727;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77783894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5995;AVGPOST=0.9967;RSQ=0.9944;ERATE=0.0004;THETA=0.0009;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 77783914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77784091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8166;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77784149 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4739;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77784254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8429;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77784470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.615;LDAF=0.0269;AVGPOST=0.9707;RSQ=0.5646;ERATE=0.0050;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77784572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0059;AVGPOST=0.9954;RSQ=0.6794;ERATE=0.0008;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77784584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77784604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5417;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77784613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.478;LDAF=0.0142;AVGPOST=0.9803;RSQ=0.4941;ERATE=0.0032;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77784696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0062;AVGPOST=0.9980;RSQ=0.8786;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77784731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.478;LDAF=0.0047;AVGPOST=0.9945;RSQ=0.5380;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77784760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77784797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6718;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77784863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4267;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77784955 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.840;LDAF=0.0090;AVGPOST=0.9972;RSQ=0.8782;ERATE=0.0005;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77785002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77785052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77785306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4354;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 77785541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77785576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0127;AVGPOST=0.9991;RSQ=0.9723;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77785686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9015;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77785799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8045;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77785802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0686;AVGPOST=0.9967;RSQ=0.9803;ERATE=0.0006;THETA=0.0008;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 77785809 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77786075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.882;LDAF=0.0168;AVGPOST=0.9967;RSQ=0.9202;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77786341 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6272;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77786342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0255;AVGPOST=0.9991;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 77786362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0473;AVGPOST=0.9971;RSQ=0.9789;ERATE=0.0003;THETA=0.0009;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77786576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7396;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77786621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77786750 . GGT G 356 PASS INDEL;BAVGPOST=0.983;BRSQ=0.628;LDAF=0.0358;AVGPOST=0.9633;RSQ=0.5757;ERATE=0.0166;THETA=0.0016;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77786789 . CGT C 225 PASS INDEL;BAVGPOST=0.981;BRSQ=0.650;LDAF=0.0467;AVGPOST=0.9494;RSQ=0.5385;ERATE=0.0214;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77786803 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4186;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0005;THETA=0.0072;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 77786986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77786998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0032;AVGPOST=0.9962;RSQ=0.5703;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77787105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.973;LDAF=0.3289;AVGPOST=0.9881;RSQ=0.9803;ERATE=0.0007;THETA=0.0009;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 77787227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8080;ERATE=0.0003;THETA=0.0077;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77787246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77787353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0081;AVGPOST=0.9979;RSQ=0.9059;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77787416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9282;ERATE=0.0003;THETA=0.0066;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77787432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0115;AVGPOST=0.9994;RSQ=0.9760;ERATE=0.0003;THETA=0.0034;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77787637 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.969;LDAF=0.2996;AVGPOST=0.9833;RSQ=0.9703;ERATE=0.0045;THETA=0.0086;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 77787692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77787739 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.964;LDAF=0.7211;AVGPOST=0.9815;RSQ=0.9645;ERATE=0.0099;THETA=0.0028;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 77787784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77787843 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8438;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77787867 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77787902 . GT G 139 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8846;ERATE=0.0008;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77788012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.803;LDAF=0.0113;AVGPOST=0.9955;RSQ=0.8553;ERATE=0.0003;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77788045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0185;AVGPOST=0.9979;RSQ=0.9606;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77788065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8474;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77788242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7345;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77788267 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0073;AVGPOST=0.9992;RSQ=0.9575;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77788292 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9820;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77788394 . AC A 7771 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1330;AVGPOST=0.9931;RSQ=0.9777;ERATE=0.0007;THETA=0.0002;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 77788406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2992;AVGPOST=0.9947;RSQ=0.9899;ERATE=0.0005;THETA=0.0005;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 77788413 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8912;AVGPOST=0.9984;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 77788530 . CT C 9720 PASS INDEL;BAVGPOST=0.984;BRSQ=0.310;LDAF=0.9749;AVGPOST=0.9622;RSQ=0.3960;ERATE=0.0036;THETA=0.0002;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 77788689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3622;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77788731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9782;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77788772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7077;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77788787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8483;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77788864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9752;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77789131 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77789173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77789222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77789225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77789586 . CT C 29374 PASS INDEL;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2735;AVGPOST=0.9949;RSQ=0.9895;ERATE=0.0005;THETA=0.0005;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 77789611 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77789636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77789653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1244;AVGPOST=0.9977;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 77789661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8874;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77789815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77789824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77789871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77789924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77789962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77790023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77790030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790033 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77790047 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77790050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77790083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790084 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77790176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790194 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790379 . TG T 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4097;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0050;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0002;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77790511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77790543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77790605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77790653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77790663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77790670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77790716 . GC G 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8289;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77790807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9731;ERATE=0.0002;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77790922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0009;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77790965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9558;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77791040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8132;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77791113 . CT C 171 PASS INDEL;BAVGPOST=0.889;BRSQ=0.367;LDAF=0.1188;AVGPOST=0.8763;RSQ=0.5555;ERATE=0.0046;THETA=0.0002;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 77791127 rs71772324 TC T 8453 PASS INDEL;BAVGPOST=0.991;BRSQ=0.970;LDAF=0.1657;AVGPOST=0.9954;RSQ=0.9856;ERATE=0.0008;THETA=0.0002;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 77791130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2963;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 77791199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77791255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77791285 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0133;AVGPOST=0.9993;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77791331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2965;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0002;THETA=0.0006;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 77791502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5918;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77791598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9533;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77791599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77791600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9561;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77791623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77791655 . TC T 143 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7246;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77791699 . TC T 3868 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0352;AVGPOST=0.9980;RSQ=0.9778;ERATE=0.0003;THETA=0.0013;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 77791716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77791721 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9991;RSQ=0.9747;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77791760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8976;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77791785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77791790 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77791832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77791838 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77791925 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4978;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77791926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1045;AVGPOST=0.9986;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 77792084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9993;RSQ=0.9732;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77792125 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8105;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77792168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0002;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77792197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77792241 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0002;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77792272 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77792450 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77792750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5195;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77792780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9447;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77792781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8792;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77792904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.696;LDAF=0.0261;AVGPOST=0.9773;RSQ=0.6700;ERATE=0.0083;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77792913 . GTTATGACCC G 747 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77792974 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9540;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77792985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77793040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8034;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77793041 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9303;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77793044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77793059 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0417;AVGPOST=0.9986;RSQ=0.9864;ERATE=0.0003;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 77793179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2691;AVGPOST=0.9945;RSQ=0.9882;ERATE=0.0004;THETA=0.0006;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 77793252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.619;LDAF=0.0110;AVGPOST=0.9876;RSQ=0.5621;ERATE=0.0032;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77793261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77793290 . A AC 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77793341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9852;ERATE=0.0002;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77793433 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9271;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77793441 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9982;RSQ=0.9685;ERATE=0.0002;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77793478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7122;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77793499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77793575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6509;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77793601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77793620 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5117;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 77793636 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7302;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77793738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8812;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77793802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0002;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77793816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.7932;AVGPOST=0.9957;RSQ=0.9904;ERATE=0.0009;THETA=0.0004;AC=1732;AN=2184 GT:DS:GL:BD 0.79304028 1
1 77793933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77794034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0076;AVGPOST=0.9986;RSQ=0.9257;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77794159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77794254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8779;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77794326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77794491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1275;AVGPOST=0.9991;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 77794504 . T TTTTG 148 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6397;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77794517 . GA G 1546 PASS INDEL;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0133;AVGPOST=0.9980;RSQ=0.9552;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77794576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0025;AVGPOST=0.9965;RSQ=0.5157;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77794630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.582;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5501;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77794675 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0125;AVGPOST=0.9970;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77794688 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.6156;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77794702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6900;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77794845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9261;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77794846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9760;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77794909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0356;AVGPOST=0.9985;RSQ=0.9848;ERATE=0.0002;THETA=0.0005;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 77795020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3515;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77795106 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77795157 . A AT 87 PASS INDEL;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0075;AVGPOST=0.9911;RSQ=0.5606;ERATE=0.0014;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77795253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9994;RSQ=0.9756;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77795282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0228;AVGPOST=0.9953;RSQ=0.9250;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77795326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8257;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77795508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6303;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77795563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6495;ERATE=0.0002;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77795930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77796301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1035;AVGPOST=0.9981;RSQ=0.9928;ERATE=0.0002;THETA=0.0004;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 77796332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7140;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77796373 . CAT C 1943 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9804;ERATE=0.0002;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77796412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77796611 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0002;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77796626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77796639 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77796869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0153;AVGPOST=0.9993;RSQ=0.9785;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77796979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0339;AVGPOST=0.9988;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 77796983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0140;AVGPOST=0.9969;RSQ=0.9063;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77797009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6529;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77797030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.6446;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77797620 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0105;AVGPOST=0.9995;RSQ=0.9810;ERATE=0.0003;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77797634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5488;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77797646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77797910 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77798018 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77798081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0404;AVGPOST=0.9989;RSQ=0.9889;ERATE=0.0005;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 77798135 . G GT 92 PASS INDEL;BAVGPOST=0.980;BRSQ=0.530;LDAF=0.0499;AVGPOST=0.9341;RSQ=0.4566;ERATE=0.0130;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77798135 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77798228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0002;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 77798247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0209;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77798464 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.8000;ERATE=0.0005;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77798476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8302;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77798477 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.7856;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77798523 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77798576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0934;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 77798649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77798723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.9035;ERATE=0.0003;THETA=0.0029;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77798796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0287;AVGPOST=0.9953;RSQ=0.9377;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 77798830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77798838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8620;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77798864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8208;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77798911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0058;AVGPOST=0.9987;RSQ=0.9104;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77798919 . C CT 125 PASS INDEL;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0063;AVGPOST=0.9926;RSQ=0.5721;ERATE=0.0009;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77798964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8715;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0004;THETA=0.0008;AC=1904;AN=2184 GT:DS:GL:BD 0.87179488 1
1 77799017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6718;AVGPOST=0.9942;RSQ=0.9897;ERATE=0.0006;THETA=0.0005;AC=1467;AN=2184 GT:DS:GL:BD 0.67170328 1
1 77799041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.918;LDAF=0.0283;AVGPOST=0.9962;RSQ=0.9425;ERATE=0.0003;THETA=0.0060;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77799047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.6679;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77799105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.4040;AVGPOST=0.9898;RSQ=0.9851;ERATE=0.0007;THETA=0.0094;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 77799134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1097;AVGPOST=0.9983;RSQ=0.9946;ERATE=0.0003;THETA=0.0014;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 77799285 . CA C 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5045;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77799366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77799391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.984;LDAF=0.4989;AVGPOST=0.9869;RSQ=0.9831;ERATE=0.0006;THETA=0.0206;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 77799510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0284;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77799942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.955;LDAF=0.3771;AVGPOST=0.9692;RSQ=0.9534;ERATE=0.0162;THETA=0.0128;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 77799962 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0005;THETA=0.0062;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77800104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7245;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77800420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6438;ERATE=0.0010;THETA=0.0084;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77800464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0043;AVGPOST=0.9980;RSQ=0.8180;ERATE=0.0004;THETA=0.0063;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77800527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77800553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4168;ERATE=0.0009;THETA=0.0062;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77800570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77800571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0385;AVGPOST=0.9990;RSQ=0.9896;ERATE=0.0003;THETA=0.0070;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 77800640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77800696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0042;AVGPOST=0.9984;RSQ=0.8454;ERATE=0.0005;THETA=0.0055;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77800731 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8037;AVGPOST=0.9938;RSQ=0.9847;ERATE=0.0005;THETA=0.0060;AC=1758;AN=2184 GT:DS:GL:BD 0.80494505 1
1 77800763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3568;AVGPOST=0.9899;RSQ=0.9848;ERATE=0.0006;THETA=0.0005;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 77800779 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77800873 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8665;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77801030 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8351;ERATE=0.0003;THETA=0.0059;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77801079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6636;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77801124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7043;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77801168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7255;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77801187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.918;LDAF=0.0344;AVGPOST=0.9923;RSQ=0.9139;ERATE=0.0006;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 77801260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3145;AVGPOST=0.9978;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 77801276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0402;AVGPOST=0.9990;RSQ=0.9910;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 77801302 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77801342 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8413;AVGPOST=0.9975;RSQ=0.9925;ERATE=0.0004;THETA=0.0009;AC=1840;AN=2184 GT:DS:GL:BD 0.84249085 1
1 77801373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4676;AVGPOST=0.9949;RSQ=0.9929;ERATE=0.0010;THETA=0.0002;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 77801473 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0006;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 77801506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0059;AVGPOST=0.9981;RSQ=0.8680;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77801550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8480;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77801666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.653;LDAF=0.0122;AVGPOST=0.9878;RSQ=0.6172;ERATE=0.0029;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77801687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0030;AVGPOST=0.9957;RSQ=0.4390;ERATE=0.0010;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77801697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.4963;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77801742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.4655;AVGPOST=0.9854;RSQ=0.9805;ERATE=0.0021;THETA=0.0003;AC=1019;AN=2184 GT:DS:GL:BD 0.46657509 0
1 77801745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4677;AVGPOST=0.9908;RSQ=0.9874;ERATE=0.0011;THETA=0.0004;AC=1024;AN=2184 GT:DS:GL:BD 0.46886447 0
1 77801831 rs71866892 G GA 28129 PASS INDEL;BAVGPOST=0.969;BRSQ=0.953;LDAF=0.4499;AVGPOST=0.9574;RSQ=0.9401;ERATE=0.0093;THETA=0.0002;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 77801938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6537;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77801957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4255;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0008;AC=929;AN=2184 GT:DS:GL:BD 0.42536631 0
1 77801964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0394;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77802098 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7882;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77802158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77802261 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0903;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0003;THETA=0.0027;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 77802272 rs35281244 TCA T 51448 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3624;AVGPOST=0.9932;RSQ=0.9888;ERATE=0.0018;THETA=0.0012;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 77802302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9637;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77802350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.8269;AVGPOST=0.9961;RSQ=0.9896;ERATE=0.0004;THETA=0.0003;AC=1808;AN=2184 GT:DS:GL:BD 0.82783884 1
1 77802355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.8275;AVGPOST=0.9925;RSQ=0.9800;ERATE=0.0014;THETA=0.0004;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 77802358 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3652;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 77802643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4658;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0007;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 77802659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77802716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77802733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7071;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77802803 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77802889 . T TG 20828 PASS INDEL;BAVGPOST=0.965;BRSQ=0.947;LDAF=0.3877;AVGPOST=0.9415;RSQ=0.9140;ERATE=0.0098;THETA=0.0006;AC=825;AN=2184 GT:DS:GL:BD 0.37774727 0
1 77802914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.970;LDAF=0.8275;AVGPOST=0.9807;RSQ=0.9523;ERATE=0.0083;THETA=0.0005;AC=1818;AN=2184 GT:DS:GL:BD 0.83241761 1
1 77802915 . AT A 12339 PASS INDEL;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.3543;AVGPOST=0.9877;RSQ=0.9823;ERATE=0.0008;THETA=0.0005;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 77802916 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.3569;AVGPOST=0.9897;RSQ=0.9857;ERATE=0.0003;THETA=0.0005;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 77802917 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77802977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.681;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8386;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77802978 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4737;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77803028 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77803069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77803077 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0146;AVGPOST=0.9984;RSQ=0.9603;ERATE=0.0004;THETA=0.0015;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77803165 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7750;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77803166 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5685;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77803173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77803317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77803344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7541;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77803376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7084;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77803458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77803468 . T TA 118 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77803539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77803575 . GCCATC G 169 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77803791 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0336;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77803809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2491;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0024;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 77803886 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5550;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77804083 . C CT 684 PASS INDEL;BAVGPOST=0.967;BRSQ=0.554;LDAF=0.0684;AVGPOST=0.9137;RSQ=0.4688;ERATE=0.0223;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77804210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0338;AVGPOST=0.9989;RSQ=0.9883;ERATE=0.0004;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77804292 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0422;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 77804582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77804707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77804789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77804908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.3037;AVGPOST=0.9840;RSQ=0.9744;ERATE=0.0003;THETA=0.0004;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 77804979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.3033;AVGPOST=0.9833;RSQ=0.9730;ERATE=0.0004;THETA=0.0003;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 77804980 . T TC 18897 PASS INDEL;BAVGPOST=0.983;BRSQ=0.965;LDAF=0.3020;AVGPOST=0.9721;RSQ=0.9536;ERATE=0.0039;THETA=0.0041;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 77804980 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77805003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2788;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 77805118 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7385;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77805195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.9001;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77805288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9547;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77805412 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3147;AVGPOST=0.9964;RSQ=0.9934;ERATE=0.0011;THETA=0.0006;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 77805532 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.9992;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0010;AC=2183;AN=2184 GT:DS:GL:BD 0.99954212 1
1 77805618 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0040;AVGPOST=0.9962;RSQ=0.6552;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77805624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77805668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77805886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77805927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77805928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77806024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0338;AVGPOST=0.9989;RSQ=0.9859;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77806120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4849;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77806194 . C CT 844 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8047;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77806198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0337;AVGPOST=0.9992;RSQ=0.9902;ERATE=0.0004;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77806379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77806423 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7958;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77806450 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5552;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77806595 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0038;AVGPOST=0.9956;RSQ=0.5963;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77806670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77806813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9988;RSQ=0.9326;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77806851 rs112294962 CT C 1439 PASS INDEL;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0174;AVGPOST=0.9982;RSQ=0.9561;ERATE=0.0006;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77806869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77806905 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7804;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77806961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.1829;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77807053 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0725;AVGPOST=0.9986;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 77807195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8439;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77807460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2492;AVGPOST=0.9966;RSQ=0.9935;ERATE=0.0004;THETA=0.0008;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 77807463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0048;AVGPOST=0.9957;RSQ=0.6321;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77807568 . G GA 2094 PASS INDEL;BAVGPOST=0.991;BRSQ=0.878;LDAF=0.0460;AVGPOST=0.9794;RSQ=0.8237;ERATE=0.0025;THETA=0.0005;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 77807609 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6051;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77807610 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.832;LDAF=0.0116;AVGPOST=0.9955;RSQ=0.8554;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77807642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77807678 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77807715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77807929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4780;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77807943 rs111616478 AG A 2456 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77807949 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77807964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77808046 . CG C 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5053;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77808077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77808095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9028;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77808113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77808306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7340;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77808330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0338;AVGPOST=0.9989;RSQ=0.9862;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77808351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6724;AVGPOST=0.9971;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 77808394 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2311;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 77808400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.925;LDAF=0.0926;AVGPOST=0.9764;RSQ=0.9025;ERATE=0.0041;THETA=0.0006;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 77808544 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0634;AVGPOST=0.9993;RSQ=0.9948;ERATE=0.0004;THETA=0.0009;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 77808620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.654;LDAF=0.0285;AVGPOST=0.9830;RSQ=0.7596;ERATE=0.0008;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77808732 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.6364;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77808766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0260;AVGPOST=0.9939;RSQ=0.8980;ERATE=0.0004;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77808786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4453;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77808834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0889;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0004;THETA=0.0008;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 77808851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9908;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77808859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3716;ERATE=0.0007;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77808921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0565;AVGPOST=0.9904;RSQ=0.9349;ERATE=0.0007;THETA=0.0008;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 77808962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0160;AVGPOST=0.9882;RSQ=0.7310;ERATE=0.0008;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77808980 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.795;LDAF=0.0074;AVGPOST=0.9944;RSQ=0.7147;ERATE=0.0006;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77808982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8786;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77809026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.883;LDAF=0.0263;AVGPOST=0.9871;RSQ=0.8031;ERATE=0.0011;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77809027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.874;LDAF=0.0360;AVGPOST=0.9859;RSQ=0.8413;ERATE=0.0010;THETA=0.0008;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77809088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0622;AVGPOST=0.9867;RSQ=0.9074;ERATE=0.0007;THETA=0.0011;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 77809125 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.753;LDAF=0.0104;AVGPOST=0.9928;RSQ=0.7305;ERATE=0.0008;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77809144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.512;LDAF=0.0042;AVGPOST=0.9940;RSQ=0.4601;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77809210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0036;AVGPOST=0.9957;RSQ=0.4747;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77809234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.440;LDAF=0.0057;AVGPOST=0.9941;RSQ=0.5824;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77809244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.875;LDAF=0.0178;AVGPOST=0.9887;RSQ=0.7856;ERATE=0.0010;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77809291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.431;LDAF=0.0060;AVGPOST=0.9917;RSQ=0.4315;ERATE=0.0019;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77809346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7072;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77809477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6397;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77809494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9700;ERATE=0.0004;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77809507 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0633;AVGPOST=0.9960;RSQ=0.9758;ERATE=0.0006;THETA=0.0010;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77809619 . GT G 141 PASS INDEL;BAVGPOST=0.997;BRSQ=0.632;LDAF=0.0051;AVGPOST=0.9954;RSQ=0.6668;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77809635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.650;LDAF=0.0055;AVGPOST=0.9919;RSQ=0.4372;ERATE=0.0014;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77809725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4691;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77809726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7168;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77809765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7687;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77809984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77809999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5287;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77810011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0250;AVGPOST=0.9979;RSQ=0.9701;ERATE=0.0006;THETA=0.0012;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 77810205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3841;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77810247 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4232;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77810257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0090;AVGPOST=0.9976;RSQ=0.9034;ERATE=0.0004;THETA=0.0017;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77810292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.764;LDAF=0.0314;AVGPOST=0.9814;RSQ=0.7826;ERATE=0.0010;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77810293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.830;LDAF=0.0313;AVGPOST=0.9864;RSQ=0.8236;ERATE=0.0006;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77810303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6745;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77810323 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4268;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77810324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.660;LDAF=0.0060;AVGPOST=0.9916;RSQ=0.4278;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77810349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.749;LDAF=0.0032;AVGPOST=0.9960;RSQ=0.5107;ERATE=0.0013;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77810381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5298;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77810385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0090;AVGPOST=0.9962;RSQ=0.8374;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77810530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6579;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77810835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.1189;AVGPOST=0.9857;RSQ=0.9472;ERATE=0.0007;THETA=0.0008;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 77810859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9517;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77810865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7541;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77810884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8504;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77810925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77811123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5437;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77811263 rs57149543 AT A 9244 PASS INDEL;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0527;AVGPOST=0.9963;RSQ=0.9729;ERATE=0.0005;THETA=0.0008;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 77811389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77811421 . AATG A 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7986;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77811427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8579;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77811462 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77811532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6494;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77811647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9780;ERATE=0.0004;THETA=0.0048;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77811670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8278;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77811724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77811934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6336;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77812009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9915;ERATE=0.0003;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77812039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77812043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0880;AVGPOST=0.9988;RSQ=0.9947;ERATE=0.0004;THETA=0.0009;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 77812048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77812071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9878;ERATE=0.0003;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77812174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6468;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77812532 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77812553 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77812574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6449;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77812624 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7527;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77812658 . T TA 79 PASS INDEL;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77812661 . AG A 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6599;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77812713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77812752 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77812819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6247;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77812835 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77812854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77812885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77812900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77812922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77812926 . AG A 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77812992 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.968;LDAF=0.0781;AVGPOST=0.9948;RSQ=0.9771;ERATE=0.0003;THETA=0.0006;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 77813005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8619;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77813012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4545;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77813136 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9507;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77813153 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4511;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77813154 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7930;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77813185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5038;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77813372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7110;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77813385 . C CG 599 PASS INDEL;BAVGPOST=0.989;BRSQ=0.823;LDAF=0.0324;AVGPOST=0.9873;RSQ=0.8538;ERATE=0.0020;THETA=0.0011;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77813386 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.1198;AVGPOST=0.9983;RSQ=0.9941;ERATE=0.0004;THETA=0.0006;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 77813387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7276;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=1591;AN=2184 GT:DS:GL:BD 0.72847986 1
1 77813516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5415;AVGPOST=0.9837;RSQ=0.9770;ERATE=0.0045;THETA=0.0002;AC=1190;AN=2184 GT:DS:GL:BD 0.54487181 1
1 77813587 . ACAGT A 718 PASS INDEL;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0061;AVGPOST=0.9968;RSQ=0.7996;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77813663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9103;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77813713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9156;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77813790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3200;AVGPOST=0.9950;RSQ=0.9909;ERATE=0.0016;THETA=0.0002;AC=699;AN=2184 GT:DS:GL:BD 0.32005495 0
1 77813807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0661;AVGPOST=0.9987;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 77813824 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77813852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7520;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77813853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0177;AVGPOST=0.9980;RSQ=0.9531;ERATE=0.0003;THETA=0.0001;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77813893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0222;AVGPOST=0.9994;RSQ=0.9857;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77813917 . GCAGA G 352 PASS INDEL;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7118;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77814064 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1546;AVGPOST=0.9979;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 77814146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9646;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77814194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77814222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.7093;AVGPOST=0.9662;RSQ=0.9425;ERATE=0.0103;THETA=0.0004;AC=1552;AN=2184 GT:DS:GL:BD 0.71062273 1
1 77814294 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4213;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77814341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5924;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77814384 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77814631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0278;AVGPOST=0.9986;RSQ=0.9799;ERATE=0.0003;THETA=0.0002;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77814640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3195;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=698;AN=2184 GT:DS:GL:BD 0.31959707 0
1 77814700 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9305;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77814712 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8580;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77814798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3149;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 77814857 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7331;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77814945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5219;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77814949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8096;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77815077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7665;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77815108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0307;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 77815123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8931;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77815128 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9620;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77815281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5758;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77815424 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1501;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 77815432 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77815447 . TCA T 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8436;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77815459 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1979;AVGPOST=0.9959;RSQ=0.9900;ERATE=0.0007;THETA=0.0001;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 77815543 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77815577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8121;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77815617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1369;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 77815702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7883;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77815703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1102;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77815812 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77815934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77815975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.916;LDAF=0.0181;AVGPOST=0.9974;RSQ=0.9391;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77816005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77816047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5824;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77816064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77816150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0990;AVGPOST=0.9980;RSQ=0.9923;ERATE=0.0003;THETA=0.0010;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 77816172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77816335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0420;AVGPOST=0.9992;RSQ=0.9923;ERATE=0.0003;THETA=0.0007;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 77816352 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77816364 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77816382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0358;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 77816431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77816432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77816522 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0358;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 77816541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2016;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0029;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 77816600 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1734;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0003;THETA=0.0002;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 77816637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77816651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1731;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 77816674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7492;AVGPOST=0.9934;RSQ=0.9870;ERATE=0.0011;THETA=0.0002;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 77816728 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6151;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77816796 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9722;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77816890 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8865;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77816891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0187;AVGPOST=0.9979;RSQ=0.9561;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77816969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5220;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77817034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8031;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77817083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8567;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77817124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1170;AVGPOST=0.9988;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 77817196 . C CTACTCTGGA 53899 PASS INDEL;BAVGPOST=0.989;BRSQ=0.968;LDAF=0.1555;AVGPOST=0.9943;RSQ=0.9873;ERATE=0.0006;THETA=0.0003;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 77817239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7920;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77817268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2744;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 77817311 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8743;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77817327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9987;RSQ=0.9389;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77817395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7663;ERATE=0.0004;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77817428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77817646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0224;AVGPOST=0.9996;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77817705 . T TG 136 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6807;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77817733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2513;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 77817851 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8896;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77817931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77818013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2537;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 77818016 . TC T 220 PASS INDEL;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6777;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77818023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7587;AVGPOST=0.9961;RSQ=0.9923;ERATE=0.0009;THETA=0.0002;AC=1658;AN=2184 GT:DS:GL:BD 0.75915754 1
1 77818157 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0205;AVGPOST=0.9993;RSQ=0.9837;ERATE=0.0003;THETA=0.0001;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77818178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5189;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77818266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77818467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5861;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77818479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.5080;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77818641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1373;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0004;THETA=0.0007;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 77818746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77818778 . AAAAT A 2349 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0139;AVGPOST=0.9991;RSQ=0.9759;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77818833 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77818881 . G GA 4109 PASS INDEL;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0374;AVGPOST=0.9967;RSQ=0.9664;ERATE=0.0005;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77818904 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77819046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8569;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77819218 . GCA G 61 PASS INDEL;BAVGPOST=0.991;BRSQ=0.669;LDAF=0.0228;AVGPOST=0.9755;RSQ=0.5652;ERATE=0.0106;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77819287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9735;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77819383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0091;AVGPOST=0.9989;RSQ=0.9569;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77819429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8981;AVGPOST=0.9985;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=1961;AN=2184 GT:DS:GL:BD 0.89789379 1
1 77819569 rs58825880 ATT A 386 PASS INDEL;BAVGPOST=0.995;BRSQ=0.738;LDAF=0.0116;AVGPOST=0.9971;RSQ=0.9152;ERATE=0.0002;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77819630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6441;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77819707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77819764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77819801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.647;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6551;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77819871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0064;AVGPOST=0.9964;RSQ=0.7931;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77819898 . G GGGT 441 PASS INDEL;BAVGPOST=0.908;BRSQ=0.377;LDAF=0.1192;AVGPOST=0.8558;RSQ=0.4568;ERATE=0.0205;THETA=0.0013;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 77819898 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.0931;AVGPOST=0.9902;RSQ=0.9578;ERATE=0.0004;THETA=0.0005;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 77819905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1086;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 77819927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6443;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77820040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4058;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0002;THETA=0.0006;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 77820100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8338;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77820135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8282;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77820177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8736;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77820283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8465;ERATE=0.0005;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77820419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9810;ERATE=0.0002;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77820441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77820478 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1157;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 77820614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7581;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77820667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77820757 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9648;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77820911 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0129;AVGPOST=0.9993;RSQ=0.9730;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77820933 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1156;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 77821228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5399;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77821233 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77821305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8092;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77821380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7167;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77821381 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77821386 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4057;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 77821554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0255;AVGPOST=0.9984;RSQ=0.9783;ERATE=0.0004;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 77821582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6108;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77821619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77821674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0126;AVGPOST=0.9992;RSQ=0.9704;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77821679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8924;ERATE=0.0002;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77821703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9733;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77821725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77822001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4783;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77822037 . AAC A 239 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6161;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77822180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8643;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77822201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0814;AVGPOST=0.9946;RSQ=0.9744;ERATE=0.0004;THETA=0.0002;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 77822235 . A AT 142 PASS INDEL;BAVGPOST=0.988;BRSQ=0.547;LDAF=0.0247;AVGPOST=0.9710;RSQ=0.5269;ERATE=0.0066;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77822236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77822346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5487;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77822365 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0002;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77822425 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1146;AVGPOST=0.9989;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 77822434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0215;AVGPOST=0.9975;RSQ=0.9492;ERATE=0.0007;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77822541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2843;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0004;THETA=0.0001;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 77822641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7591;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77822648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5307;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77822805 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77822834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0002;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77822866 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6102;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77822953 . T TA 271 PASS INDEL;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0043;AVGPOST=0.9956;RSQ=0.5456;ERATE=0.0014;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77822954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0280;AVGPOST=0.9986;RSQ=0.9833;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 77823092 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9101;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77823121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2849;AVGPOST=0.9970;RSQ=0.9951;ERATE=0.0005;THETA=0.0008;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 77823135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8581;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77823183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77823322 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77823459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0187;AVGPOST=0.9992;RSQ=0.9838;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77823538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1425;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0005;THETA=0.0005;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 77823594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0200;AVGPOST=0.9984;RSQ=0.9680;ERATE=0.0004;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77823611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6515;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77823648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1425;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 77823656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77823743 . C CT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77823821 . T TC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.4204;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77823954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77823981 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77824047 . TTTAAAAAAA T 5259 PASS INDEL;BAVGPOST=0.901;BRSQ=0.607;LDAF=0.1592;AVGPOST=0.8813;RSQ=0.6701;ERATE=0.0074;THETA=0.0002;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 77824311 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0220;AVGPOST=0.9769;RSQ=0.5771;ERATE=0.0032;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77824342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0196;AVGPOST=0.9970;RSQ=0.9430;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77824389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2505;AVGPOST=0.9962;RSQ=0.9932;ERATE=0.0004;THETA=0.0006;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 77824592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1421;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0003;THETA=0.0012;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 77824643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0081;AVGPOST=0.9996;RSQ=0.9775;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77824814 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77824835 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0032;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77825028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0466;AVGPOST=0.9988;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77825044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77825086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5228;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77825110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1638;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 77825136 . A ATT 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77825142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77825169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9994;RSQ=0.9831;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77825171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.976;LDAF=0.1372;AVGPOST=0.9892;RSQ=0.9687;ERATE=0.0008;THETA=0.0007;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 77825241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3805;AVGPOST=0.9810;RSQ=0.9756;ERATE=0.0011;THETA=0.0002;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 77825319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0041;AVGPOST=0.9953;RSQ=0.5106;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77825332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.975;LDAF=0.1357;AVGPOST=0.9957;RSQ=0.9876;ERATE=0.0004;THETA=0.0051;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 77825340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77825372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8814;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77825404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77825452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.963;LDAF=0.2449;AVGPOST=0.9844;RSQ=0.9752;ERATE=0.0004;THETA=0.0002;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 77825492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.963;LDAF=0.2447;AVGPOST=0.9866;RSQ=0.9788;ERATE=0.0004;THETA=0.0004;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 77825493 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1537;AVGPOST=0.9949;RSQ=0.9867;ERATE=0.0005;THETA=0.0030;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 77825515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77825636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77825690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9092;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77825770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77825794 . G GT 3119 PASS INDEL;BAVGPOST=0.895;BRSQ=0.809;LDAF=0.3900;AVGPOST=0.8216;RSQ=0.7310;ERATE=0.0362;THETA=0.0005;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 77825794 rs35730335 T TA 35389 PASS INDEL;BAVGPOST=0.971;BRSQ=0.953;LDAF=0.3383;AVGPOST=0.9876;RSQ=0.9806;ERATE=0.0007;THETA=0.0004;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 77825797 . A AC 922 PASS INDEL;BAVGPOST=0.921;BRSQ=0.821;LDAF=0.2273;AVGPOST=0.9205;RSQ=0.8527;ERATE=0.0007;THETA=0.0003;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 77825799 . A AG 907 PASS INDEL;BAVGPOST=0.923;BRSQ=0.825;LDAF=0.2385;AVGPOST=0.9069;RSQ=0.8211;ERATE=0.0009;THETA=0.0005;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 77825801 . A AT 1958 PASS INDEL;BAVGPOST=0.927;BRSQ=0.834;LDAF=0.2322;AVGPOST=0.9224;RSQ=0.8618;ERATE=0.0008;THETA=0.0004;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 77825803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.2708;AVGPOST=0.9911;RSQ=0.9878;ERATE=0.0006;THETA=0.0011;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 77825910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.4527;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77825976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.8242;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77826005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8898;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77826075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1243;AVGPOST=0.9884;RSQ=0.9584;ERATE=0.0018;THETA=0.0004;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 77826094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.981;LDAF=0.3907;AVGPOST=0.9920;RSQ=0.9902;ERATE=0.0006;THETA=0.0005;AC=856;AN=2184 GT:DS:GL:BD 0.39194140 0
1 77826134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.2759;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0005;THETA=0.0011;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 77826143 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1189;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 77826195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0504;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 77826283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1173;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 77826289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2765;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 77826488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77826518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77826531 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77826532 rs10713847 TG T 12035 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1193;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0006;THETA=0.0004;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 77826545 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8600;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77826560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1185;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 77826576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1189;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 77826594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3968;AVGPOST=0.9972;RSQ=0.9967;ERATE=0.0018;THETA=0.0007;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 77826699 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2765;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 77826800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1192;AVGPOST=0.9979;RSQ=0.9927;ERATE=0.0004;THETA=0.0002;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 77826855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77826862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1190;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 77826865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9991;RSQ=0.9704;ERATE=0.0003;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77826874 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0503;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 77826909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1176;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 77826985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1758;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 77827074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77827088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77827103 . GTAATTATT G 1926 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0133;AVGPOST=0.9974;RSQ=0.9293;ERATE=0.0005;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77827105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7083;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77827356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6460;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77827370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4531;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1221;AVGPOST=0.9957;RSQ=0.9852;ERATE=0.0008;THETA=0.0004;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 77827544 rs71576429 C CAA 1575 PASS INDEL;BAVGPOST=0.656;BRSQ=0.380;LDAF=0.3976;AVGPOST=0.7164;RSQ=0.5224;ERATE=0.0209;THETA=0.0008;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 77827565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.839;LDAF=0.3071;AVGPOST=0.9253;RSQ=0.8701;ERATE=0.0141;THETA=0.0006;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 77827591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6008;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77827618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1190;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 77827666 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9558;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77827705 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7152;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=1563;AN=2184 GT:DS:GL:BD 0.71565932 1
1 77827816 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77827871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77827876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77827986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77828052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77828250 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77828430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0142;AVGPOST=0.9994;RSQ=0.9817;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77828493 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77828525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7996;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77828602 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.2982;AVGPOST=0.9931;RSQ=0.9892;ERATE=0.0008;THETA=0.0021;AC=650;AN=2184 GT:DS:GL:BD 0.29761904 0
1 77828706 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5708;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77828782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77828802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.5934;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77828915 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7002;AVGPOST=0.9958;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 77828925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6516;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77828998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77829033 rs6143681 CCCAT C 30200 PASS INDEL;BAVGPOST=0.986;BRSQ=0.978;LDAF=0.2598;AVGPOST=0.9807;RSQ=0.9620;ERATE=0.0016;THETA=0.0039;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 77829075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9100;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77829163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8328;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77829178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5696;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77829183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7279;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77829243 rs59520362 GAC G 1543 PASS INDEL;BAVGPOST=0.996;BRSQ=0.917;LDAF=0.0258;AVGPOST=0.9959;RSQ=0.9365;ERATE=0.0006;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77829258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77829372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6962;AVGPOST=0.9961;RSQ=0.9932;ERATE=0.0004;THETA=0.0007;AC=1519;AN=2184 GT:DS:GL:BD 0.69551283 1
1 77829379 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6925;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77829382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8960;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77829407 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0141;AVGPOST=0.9988;RSQ=0.9604;ERATE=0.0003;THETA=0.0056;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77829483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0051;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77829619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77829675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9989;RSQ=0.9646;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77829785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0144;AVGPOST=0.9977;RSQ=0.9438;ERATE=0.0005;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77829792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.6334;ERATE=0.0005;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77829834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9253;ERATE=0.0004;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77829928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0130;AVGPOST=0.9971;RSQ=0.9173;ERATE=0.0005;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77829954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5387;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77829963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77829980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77830029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77830030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5972;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77830139 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77830185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5520;AVGPOST=0.9955;RSQ=0.9938;ERATE=0.0004;THETA=0.0010;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 77830309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5628;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77830456 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0018;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77830555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77830602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6317;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77830674 . TA T 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5620;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77830699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1891;AVGPOST=0.9980;RSQ=0.9957;ERATE=0.0004;THETA=0.0009;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 77830732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7269;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77830793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77830834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77830836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8926;ERATE=0.0007;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77830859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0045;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77830910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77831078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77831320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1923;AVGPOST=0.9934;RSQ=0.9855;ERATE=0.0013;THETA=0.0019;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 77831394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5618;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77831409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6183;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77831484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6954;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77831561 . TC T 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3852;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77831593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77831617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77831756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9210;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77831811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8900;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77831986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7959;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77831991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77832023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8854;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77832084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0093;AVGPOST=0.9977;RSQ=0.9002;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77832192 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6054;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77832224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8410;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77832420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9144;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77832450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6070;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77832591 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7074;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77832610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6568;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77832885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0081;AVGPOST=0.9955;RSQ=0.8037;ERATE=0.0008;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77832915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.607;LDAF=0.0174;AVGPOST=0.9775;RSQ=0.5436;ERATE=0.0009;THETA=0.0020;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77833003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.650;LDAF=0.0265;AVGPOST=0.9886;RSQ=0.8367;ERATE=0.0011;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77833037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.340;LDAF=0.0027;AVGPOST=0.9956;RSQ=0.2767;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77833042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.977;LDAF=0.5497;AVGPOST=0.9870;RSQ=0.9804;ERATE=0.0014;THETA=0.0006;AC=1205;AN=2184 GT:DS:GL:BD 0.55173993 1
1 77833056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77833080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0051;AVGPOST=0.9931;RSQ=0.5003;ERATE=0.0011;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77833082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77833086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7190;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77833135 . CTT C 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6031;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77833155 . TCTA T 618 PASS INDEL;BAVGPOST=0.995;BRSQ=0.947;LDAF=0.0159;AVGPOST=0.9970;RSQ=0.9270;ERATE=0.0005;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77833188 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.989;LDAF=0.5847;AVGPOST=0.9921;RSQ=0.9883;ERATE=0.0007;THETA=0.0006;AC=1277;AN=2184 GT:DS:GL:BD 0.58470696 1
1 77833191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5034;AVGPOST=0.9954;RSQ=0.9938;ERATE=0.0005;THETA=0.0039;AC=1097;AN=2184 GT:DS:GL:BD 0.50228935 1
1 77833236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.467;LDAF=0.0035;AVGPOST=0.9941;RSQ=0.3921;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77833237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77833290 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8916;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77833418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0082;AVGPOST=0.9980;RSQ=0.8954;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77833466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0395;AVGPOST=0.9990;RSQ=0.9901;ERATE=0.0003;THETA=0.0008;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77833484 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77833592 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9477;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77833736 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8974;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77833778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6772;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77833794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77833799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8180;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77833826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5794;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77833891 . AG A 581 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9698;ERATE=0.0004;THETA=0.0028;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77834000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0283;AVGPOST=0.9981;RSQ=0.9738;ERATE=0.0004;THETA=0.0015;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77834066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0188;AVGPOST=0.9995;RSQ=0.9880;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77834112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7206;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77834128 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4827;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77834189 . CT C 127 PASS INDEL;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7404;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77834203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0262;AVGPOST=0.9992;RSQ=0.9875;ERATE=0.0004;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77834287 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0263;AVGPOST=0.9990;RSQ=0.9852;ERATE=0.0004;THETA=0.0047;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77834288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77834334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77834350 rs113059855 CT C 255 PASS INDEL;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.8029;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77834373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7772;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77834379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6401;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77834566 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77834693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0172;AVGPOST=0.9985;RSQ=0.9668;ERATE=0.0003;THETA=0.0017;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77834786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9475;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0004;THETA=0.0007;AC=2069;AN=2184 GT:DS:GL:BD 0.94734430 1
1 77834907 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0057;AVGPOST=0.9985;RSQ=0.8883;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77834913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0585;AVGPOST=0.9986;RSQ=0.9895;ERATE=0.0004;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 77835007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6337;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77835030 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8339;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77835172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5607;ERATE=0.0007;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77835236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.9318;AVGPOST=0.9958;RSQ=0.9759;ERATE=0.0010;THETA=0.0007;AC=2039;AN=2184 GT:DS:GL:BD 0.93360806 1
1 77835247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9612;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77835388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5924;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77835409 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0089;AVGPOST=0.9978;RSQ=0.8980;ERATE=0.0006;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77835414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9531;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0004;THETA=0.0014;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 77835441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9528;AVGPOST=0.9982;RSQ=0.9850;ERATE=0.0006;THETA=0.0005;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 77835491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0033;AVGPOST=0.9954;RSQ=0.5433;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77835509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0312;AVGPOST=0.9978;RSQ=0.9736;ERATE=0.0004;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 77835516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77835740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9493;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77835789 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.5976;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77835887 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.4664;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77835929 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8929;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77836017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.729;LDAF=0.0097;AVGPOST=0.9926;RSQ=0.6853;ERATE=0.0008;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77836044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.3760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77836045 . CCT C 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4616;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77836047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9533;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 77836109 rs11390377 C CT 105489 PASS INDEL;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.9840;AVGPOST=0.9965;RSQ=0.9251;ERATE=0.0004;THETA=0.0007;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 77836186 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0428;AVGPOST=0.9980;RSQ=0.9850;ERATE=0.0004;THETA=0.0007;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 77836222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9646;ERATE=0.0004;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77836279 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.523;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77836328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8968;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77836345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.9676;AVGPOST=0.9970;RSQ=0.9666;ERATE=0.0007;THETA=0.0008;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 77836368 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77836371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9472;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0008;AC=2069;AN=2184 GT:DS:GL:BD 0.94734430 1
1 77836411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77836467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4468;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77836473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5183;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77836485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4758;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77836649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0069;AVGPOST=0.9986;RSQ=0.9264;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77836701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4363;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77836717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4866;AVGPOST=0.9957;RSQ=0.9928;ERATE=0.0006;THETA=0.0003;AC=1064;AN=2184 GT:DS:GL:BD 0.48717949 0
1 77836829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0159;AVGPOST=0.9988;RSQ=0.9706;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77836920 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5836;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77836982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0048;AVGPOST=0.9963;RSQ=0.7042;ERATE=0.0010;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77837032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7672;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77837157 . TA T 687 PASS INDEL;BAVGPOST=0.950;BRSQ=0.395;LDAF=0.0599;AVGPOST=0.9290;RSQ=0.5050;ERATE=0.0028;THETA=0.0016;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77837323 . TA T 9974 PASS INDEL;BAVGPOST=0.940;BRSQ=0.897;LDAF=0.4508;AVGPOST=0.8760;RSQ=0.8236;ERATE=0.0184;THETA=0.0005;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 77837325 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.924;LDAF=0.4932;AVGPOST=0.9358;RSQ=0.9074;ERATE=0.0082;THETA=0.0005;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 77837326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77837526 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77837530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9771;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77837647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77837652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77837687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9533;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0019;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 77837695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77837788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77837793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9650;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77837870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9532;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0003;THETA=0.0009;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 77837897 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77837926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9685;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77837953 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5290;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77837959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77838068 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9518;AVGPOST=0.9968;RSQ=0.9758;ERATE=0.0007;THETA=0.0003;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 77838298 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3689;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0007;THETA=0.0004;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 77838396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.9542;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0004;THETA=0.0006;AC=2084;AN=2184 GT:DS:GL:BD 0.95421243 1
1 77838501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4609;AVGPOST=0.9952;RSQ=0.9930;ERATE=0.0006;THETA=0.0005;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 77838520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.6776;ERATE=0.0004;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77838521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0525;AVGPOST=0.9958;RSQ=0.9668;ERATE=0.0004;THETA=0.0011;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 77838681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77838898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7279;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77838921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.912;LDAF=0.0282;AVGPOST=0.9962;RSQ=0.9514;ERATE=0.0003;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77839086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8476;ERATE=0.0013;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77839285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8366;ERATE=0.0013;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77839337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77839391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9360;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77839451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6935;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77839511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77839616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77839655 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0119;AVGPOST=0.9990;RSQ=0.9720;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77839702 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.1938;AVGPOST=0.9955;RSQ=0.9902;ERATE=0.0004;THETA=0.0004;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 77839800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9323;ERATE=0.0011;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77839846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77839982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2521;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0004;THETA=0.0014;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 77840044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9219;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77840045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77840053 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77840094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77840120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840135 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9774;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77840234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8202;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77840254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7518;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77840399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77840498 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7627;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77840523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77840537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840550 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77840572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77840853 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77841079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77841360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7288;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77841390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0244;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77841429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0179;AVGPOST=0.9993;RSQ=0.9808;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77841431 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77841434 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9675;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77841507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0245;AVGPOST=0.9994;RSQ=0.9885;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77841508 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6592;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77841581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77841608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5801;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77841618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.4146;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77841679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77841687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5833;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77841778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0136;AVGPOST=0.9990;RSQ=0.9688;ERATE=0.0003;THETA=0.0001;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77841818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3610;AVGPOST=0.9960;RSQ=0.9926;ERATE=0.0008;THETA=0.0004;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 77841833 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2628;AVGPOST=0.9925;RSQ=0.9869;ERATE=0.0009;THETA=0.0005;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 77841968 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0457;AVGPOST=0.9990;RSQ=0.9913;ERATE=0.0004;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 77842000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5838;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77842065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8977;ERATE=0.0004;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77842118 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5852;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77842200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0132;AVGPOST=0.9988;RSQ=0.9666;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77842215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7974;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77842301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.9815;AVGPOST=0.9976;RSQ=0.9559;ERATE=0.0004;THETA=0.0003;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 77842302 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77842315 . TG T 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.7054;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77842341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7973;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77842358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7644;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77842380 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0397;AVGPOST=0.9975;RSQ=0.9721;ERATE=0.0004;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77842468 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6413;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77842519 . CA C 149 PASS INDEL;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7022;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77842563 . AT A 685 PASS INDEL;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0132;AVGPOST=0.9987;RSQ=0.9584;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77842657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9991;RSQ=0.9677;ERATE=0.0005;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77842691 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9991;RSQ=0.9378;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77842800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2755;AVGPOST=0.9890;RSQ=0.9799;ERATE=0.0048;THETA=0.0009;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 77842816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9226;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77842894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.4868;AVGPOST=0.9893;RSQ=0.9841;ERATE=0.0018;THETA=0.0006;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 77842938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9758;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77842962 . AG A 122 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8910;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77842981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1239;AVGPOST=0.9966;RSQ=0.9897;ERATE=0.0004;THETA=0.0006;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 77842989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7136;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77843146 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77843207 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3550;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77843339 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9857;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77843370 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77843431 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0062;AVGPOST=0.9960;RSQ=0.7658;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77843434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.8007;ERATE=0.0004;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77843443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4512;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77843579 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77843843 rs72515960 A AT 26537 PASS INDEL;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.3681;AVGPOST=0.9801;RSQ=0.9655;ERATE=0.0037;THETA=0.0010;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 77843872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6561;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77843986 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3683;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0005;THETA=0.0006;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 77844112 . GC G 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4267;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77844157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6099;ERATE=0.0008;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77844189 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7403;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77844295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.5874;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77844441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5525;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77844480 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3686;AVGPOST=0.9975;RSQ=0.9962;ERATE=0.0006;THETA=0.0007;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 77844599 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77844609 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8263;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77844653 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0195;AVGPOST=0.9968;RSQ=0.9475;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77844741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77844743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0097;AVGPOST=0.9980;RSQ=0.9224;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77844847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.951;LDAF=0.0311;AVGPOST=0.9971;RSQ=0.9612;ERATE=0.0004;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77844860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77844872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6189;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77844933 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1101;AVGPOST=0.9970;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77844988 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0079;AVGPOST=0.9985;RSQ=0.9200;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77845099 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0083;AVGPOST=0.9992;RSQ=0.9671;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77845134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77845163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0133;AVGPOST=0.9970;RSQ=0.9057;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77845201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7760;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77845217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3693;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0010;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 77845292 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0226;AVGPOST=0.9988;RSQ=0.9794;ERATE=0.0004;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77845355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5784;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77845401 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845402 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.593;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9173;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77845455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3411;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 77845549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0056;AVGPOST=0.9982;RSQ=0.8711;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77845558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4769;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6203;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77845589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2880;AVGPOST=0.9973;RSQ=0.9949;ERATE=0.0004;THETA=0.0009;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 77845617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3663;AVGPOST=0.9958;RSQ=0.9932;ERATE=0.0006;THETA=0.0003;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 77845695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1108;AVGPOST=0.9964;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77845713 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4824;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5661;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845794 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0287;AVGPOST=0.9988;RSQ=0.9802;ERATE=0.0005;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77845833 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5023;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845838 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3689;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 77845880 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77845891 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77846009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77846092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5019;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77846236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0289;AVGPOST=0.9988;RSQ=0.9823;ERATE=0.0005;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77846262 . T TA 396 PASS INDEL;BAVGPOST=0.993;BRSQ=0.902;LDAF=0.0371;AVGPOST=0.9851;RSQ=0.8431;ERATE=0.0022;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 77846314 . A AT 3906 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0286;AVGPOST=0.9989;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77846322 rs36062038 C CA 1276 PASS INDEL;BAVGPOST=0.984;BRSQ=0.745;LDAF=0.0417;AVGPOST=0.9639;RSQ=0.6319;ERATE=0.0051;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77846361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7849;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77846390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0097;AVGPOST=0.9956;RSQ=0.8158;ERATE=0.0004;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77846473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5550;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77846491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2900;AVGPOST=0.9947;RSQ=0.9903;ERATE=0.0006;THETA=0.0011;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 77846509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0109;AVGPOST=0.9988;RSQ=0.9519;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77846537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0258;AVGPOST=0.9972;RSQ=0.9601;ERATE=0.0003;THETA=0.0011;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 77846547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77846629 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77846680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0378;AVGPOST=0.9989;RSQ=0.9883;ERATE=0.0004;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 77846871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77846872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.895;LDAF=0.0309;AVGPOST=0.9939;RSQ=0.9307;ERATE=0.0006;THETA=0.0013;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 77847168 . A AAATTT 5696 PASS INDEL;BAVGPOST=0.994;BRSQ=0.887;LDAF=0.0274;AVGPOST=0.9972;RSQ=0.9592;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77847172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0039;AVGPOST=0.9949;RSQ=0.4843;ERATE=0.0009;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77847223 . TA T 79 PASS INDEL;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4978;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77847227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0059;AVGPOST=0.9968;RSQ=0.7668;ERATE=0.0014;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77847237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0531;AVGPOST=0.9992;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77847283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8612;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77847405 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0251;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0003;THETA=0.0012;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 77847461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0271;AVGPOST=0.9968;RSQ=0.9515;ERATE=0.0005;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 77847546 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2877;AVGPOST=0.9970;RSQ=0.9940;ERATE=0.0008;THETA=0.0024;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 77847589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0244;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77847701 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8010;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77847706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9913;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77847709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6473;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77847726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6029;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847758 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3461;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0005;THETA=0.0008;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 77847766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0101;AVGPOST=0.9994;RSQ=0.9703;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77847774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5168;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847822 . CA C 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4157;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77847830 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0253;AVGPOST=0.9984;RSQ=0.9754;ERATE=0.0006;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77847917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0243;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77847925 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8865;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77848034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9606;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77848050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7443;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77848092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0333;AVGPOST=0.9919;RSQ=0.9034;ERATE=0.0006;THETA=0.0006;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77848128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3462;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0006;THETA=0.0005;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 77848150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0047;AVGPOST=0.9963;RSQ=0.6782;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77848162 rs35014430 TTC T 30430 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3460;AVGPOST=0.9941;RSQ=0.9892;ERATE=0.0013;THETA=0.0008;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 77848295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3691;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 77848414 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77848452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3460;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0005;THETA=0.0006;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 77848454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0030;AVGPOST=0.9963;RSQ=0.5646;ERATE=0.0007;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77848462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77848476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77848592 . TAAA T 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5254;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77848650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77848717 rs10653836 A ATTG 41877 PASS INDEL;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3436;AVGPOST=0.9831;RSQ=0.9715;ERATE=0.0044;THETA=0.0006;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 77848764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3446;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0005;THETA=0.0008;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 77848887 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7652;ERATE=0.0004;THETA=0.0210;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77849122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849129 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.928;LDAF=0.7376;AVGPOST=0.9596;RSQ=0.9190;ERATE=0.0011;THETA=0.0030;AC=1615;AN=2184 GT:DS:GL:BD 0.73946887 1
1 77849213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9202;ERATE=0.0003;THETA=0.0053;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77849269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5574;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.940;LDAF=0.3079;AVGPOST=0.9649;RSQ=0.9409;ERATE=0.0005;THETA=0.0004;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 77849416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0292;AVGPOST=0.9978;RSQ=0.9674;ERATE=0.0003;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77849603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9092;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77849715 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.9298;ERATE=0.0003;THETA=0.0023;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77849844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5335;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77849955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8777;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77849956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77850020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6671;ERATE=0.0007;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77850039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0153;AVGPOST=0.9996;RSQ=0.9891;ERATE=0.0003;THETA=0.0018;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77850129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.600;LDAF=0.0080;AVGPOST=0.9918;RSQ=0.6100;ERATE=0.0011;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77850160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7128;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77850334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9838;ERATE=0.0003;THETA=0.0043;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77850342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0163;AVGPOST=0.9982;RSQ=0.9545;ERATE=0.0005;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77850366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77850481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9474;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77850501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0074;AVGPOST=0.9972;RSQ=0.8421;ERATE=0.0015;THETA=0.0024;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77850528 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6355;ERATE=0.0004;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77850598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8422;ERATE=0.0003;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77850720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6106;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77850829 . CTT C 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7403;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77850842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.896;LDAF=0.0211;AVGPOST=0.9963;RSQ=0.9347;ERATE=0.0003;THETA=0.0021;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77850871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77850899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77850918 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77850980 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77851145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9358;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77851210 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7576;ERATE=0.0004;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77851228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77851278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77851304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0110;AVGPOST=0.9996;RSQ=0.9832;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77851326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77851368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3160;ERATE=0.0004;THETA=0.0021;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77851655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5745;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77851687 rs111355268 T TA 2374 PASS INDEL;BAVGPOST=0.955;BRSQ=0.499;LDAF=0.0789;AVGPOST=0.9069;RSQ=0.5025;ERATE=0.0083;THETA=0.0012;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 77851756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.9720;AVGPOST=0.9956;RSQ=0.9443;ERATE=0.0004;THETA=0.0056;AC=2121;AN=2184 GT:DS:GL:BD 0.97115386 1
1 77851819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5926;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77851978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.876;LDAF=0.0156;AVGPOST=0.9949;RSQ=0.8690;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77852075 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.941;LDAF=0.2261;AVGPOST=0.9758;RSQ=0.9499;ERATE=0.0006;THETA=0.0023;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 77852096 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.959;LDAF=0.4535;AVGPOST=0.9684;RSQ=0.9528;ERATE=0.0008;THETA=0.0098;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 77852125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9233;ERATE=0.0003;THETA=0.0041;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77852145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8687;ERATE=0.0003;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77852146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77852186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6234;ERATE=0.0005;THETA=0.0101;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77852199 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7437;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77852203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77852248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9989;RSQ=0.3624;ERATE=0.0004;THETA=0.0082;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77852262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5907;ERATE=0.0003;THETA=0.0104;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77852431 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0117;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77852496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77852630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0104;AVGPOST=0.9985;RSQ=0.9513;ERATE=0.0003;THETA=0.0093;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77852642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.940;LDAF=0.0421;AVGPOST=0.9945;RSQ=0.9435;ERATE=0.0009;THETA=0.0023;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 77852719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0104;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77852805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77852823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9177;ERATE=0.0003;THETA=0.0100;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77852830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.912;LDAF=0.0406;AVGPOST=0.9889;RSQ=0.8979;ERATE=0.0006;THETA=0.0025;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 77852943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7462;ERATE=0.0005;THETA=0.0149;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77852975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.941;LDAF=0.1037;AVGPOST=0.9883;RSQ=0.9553;ERATE=0.0005;THETA=0.0107;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 77853149 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.839;LDAF=0.0108;AVGPOST=0.9963;RSQ=0.8681;ERATE=0.0004;THETA=0.0023;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77853150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8016;ERATE=0.0005;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77853224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77853406 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0108;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77853467 . TC T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5810;ERATE=0.0004;THETA=0.0217;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77853502 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0140;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77853565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6048;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77853641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6312;ERATE=0.0011;THETA=0.0144;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77853701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0343;AVGPOST=0.9979;RSQ=0.9794;ERATE=0.0003;THETA=0.0046;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77853738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77853781 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.925;LDAF=0.4090;AVGPOST=0.9365;RSQ=0.9038;ERATE=0.0359;THETA=0.0064;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 77853850 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77853880 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77853894 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2060;AVGPOST=0.9959;RSQ=0.9907;ERATE=0.0004;THETA=0.0007;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 77853948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8305;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77853990 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0047;AVGPOST=0.9985;RSQ=0.8730;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77854084 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5647;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77854116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0052;AVGPOST=0.9978;RSQ=0.8162;ERATE=0.0004;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77854177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9603;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77854330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8029;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77854358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0073;AVGPOST=0.9994;RSQ=0.9668;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77854495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5682;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77854610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9339;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77854616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.8749;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77854694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77854765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0107;AVGPOST=0.9977;RSQ=0.9145;ERATE=0.0007;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77854830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9975;RSQ=0.9280;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77854872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9123;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77854900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9621;ERATE=0.0003;THETA=0.0041;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77854943 . AG A 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77855000 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9618;ERATE=0.0003;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77855101 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0004;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77855126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77855143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77855177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7050;ERATE=0.0004;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77855322 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0003;THETA=0.0022;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77855444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77855523 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8103;ERATE=0.0005;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77855566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7554;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77855588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0229;AVGPOST=0.9988;RSQ=0.9789;ERATE=0.0003;THETA=0.0027;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 77855761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6937;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77855948 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77856006 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77856106 . A AT 40 PASS INDEL;BAVGPOST=0.989;BRSQ=0.466;LDAF=0.0180;AVGPOST=0.9753;RSQ=0.4532;ERATE=0.0041;THETA=0.0033;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77856153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9187;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77856168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.652;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7491;ERATE=0.0003;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77856208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7913;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77856246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0230;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0059;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 77856272 . TA T 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6274;ERATE=0.0006;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77856280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7880;ERATE=0.0003;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77856296 . T TA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.6970;ERATE=0.0006;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77856359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77856371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77856410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0080;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77856476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.771;LDAF=0.0044;AVGPOST=0.9972;RSQ=0.7555;ERATE=0.0003;THETA=0.0080;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77856488 . A AG 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0026;AVGPOST=0.9959;RSQ=0.4104;ERATE=0.0008;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77856577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6634;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77856725 rs57344139 GATAGTGATTGCTTC G 2671 PASS INDEL;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0172;AVGPOST=0.9984;RSQ=0.9652;ERATE=0.0004;THETA=0.0010;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77856819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9295;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77856860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0177;AVGPOST=0.9994;RSQ=0.9848;ERATE=0.0003;THETA=0.0028;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77857156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0183;AVGPOST=0.9963;RSQ=0.9179;ERATE=0.0007;THETA=0.0026;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77857323 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0039;AVGPOST=0.9967;RSQ=0.6479;ERATE=0.0008;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77857340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77857464 rs113199119 T TA 151 PASS INDEL;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7044;ERATE=0.0004;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77857478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7217;ERATE=0.0003;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77857659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77857727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.904;LDAF=0.7064;AVGPOST=0.9299;RSQ=0.8774;ERATE=0.0050;THETA=0.0009;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 77857762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8204;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77857774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6607;ERATE=0.0004;THETA=0.0150;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77857953 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6402;ERATE=0.0003;THETA=0.0150;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77858016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6881;ERATE=0.0003;THETA=0.0185;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77858042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0062;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77858153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9659;ERATE=0.0003;THETA=0.0114;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77858155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0003;THETA=0.0075;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77858189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0062;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77858264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77858321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.8974;ERATE=0.0004;THETA=0.0042;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77858322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.7604;AVGPOST=0.9798;RSQ=0.9611;ERATE=0.0008;THETA=0.0016;AC=1666;AN=2184 GT:DS:GL:BD 0.76282054 1
1 77858446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1168;AVGPOST=0.9916;RSQ=0.9723;ERATE=0.0004;THETA=0.0043;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 77858465 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77858468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77858583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77858611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77858765 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7043;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77858813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77858835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77858923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.952;LDAF=0.1404;AVGPOST=0.9914;RSQ=0.9752;ERATE=0.0007;THETA=0.0020;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 77859010 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5591;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77859124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2772;AVGPOST=0.9964;RSQ=0.9935;ERATE=0.0005;THETA=0.0026;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 77859224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3815;AVGPOST=0.9931;RSQ=0.9896;ERATE=0.0007;THETA=0.0011;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 77859244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9506;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77859293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0286;AVGPOST=0.9940;RSQ=0.9168;ERATE=0.0009;THETA=0.0012;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77859325 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.765;LDAF=0.0149;AVGPOST=0.9917;RSQ=0.8276;ERATE=0.0005;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77859379 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.765;LDAF=0.0148;AVGPOST=0.9916;RSQ=0.8208;ERATE=0.0005;THETA=0.0064;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77859380 . AT A 118 PASS INDEL;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0071;AVGPOST=0.9943;RSQ=0.6528;ERATE=0.0009;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77859398 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3789;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77859412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4464;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77859422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77859431 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0045;AVGPOST=0.9956;RSQ=0.6020;ERATE=0.0007;THETA=0.0049;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77859437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6192;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77859510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.827;LDAF=0.0154;AVGPOST=0.9921;RSQ=0.7923;ERATE=0.0007;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77859521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.734;LDAF=0.0130;AVGPOST=0.9899;RSQ=0.6884;ERATE=0.0010;THETA=0.0015;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77859523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6128;ERATE=0.0005;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77859526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2560;AVGPOST=0.9920;RSQ=0.9840;ERATE=0.0006;THETA=0.0055;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 77859531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0114;AVGPOST=0.9995;RSQ=0.9820;ERATE=0.0003;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77859769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0905;AVGPOST=0.9974;RSQ=0.9866;ERATE=0.0004;THETA=0.0011;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 77859825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9635;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77859851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3641;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 77859860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.937;LDAF=0.1042;AVGPOST=0.9926;RSQ=0.9740;ERATE=0.0004;THETA=0.0005;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 77859919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.9906;AVGPOST=0.9992;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 77859920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.4776;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77859939 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0062;AVGPOST=0.9992;RSQ=0.9605;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77859957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0347;AVGPOST=0.9991;RSQ=0.9923;ERATE=0.0005;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 77859965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7244;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77859998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8768;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77860040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77860187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4890;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77860244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3604;AVGPOST=0.9945;RSQ=0.9909;ERATE=0.0008;THETA=0.0004;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 77860309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6188;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77860353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9148;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77860388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77860469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.936;LDAF=0.1153;AVGPOST=0.9823;RSQ=0.9414;ERATE=0.0007;THETA=0.0006;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 77860570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.967;LDAF=0.3640;AVGPOST=0.9872;RSQ=0.9807;ERATE=0.0006;THETA=0.0008;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 77860571 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4029;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77860702 . TAC T 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4831;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77860758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6548;ERATE=0.0006;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77860781 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77860834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9803;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77860835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1986;AVGPOST=0.9948;RSQ=0.9894;ERATE=0.0003;THETA=0.0008;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 77860863 . AGC A 764 PASS INDEL;BAVGPOST=0.925;BRSQ=0.668;LDAF=0.0916;AVGPOST=0.9277;RSQ=0.7091;ERATE=0.0045;THETA=0.0003;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 77860863 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1983;AVGPOST=0.9962;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 77860865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3939;AVGPOST=0.9941;RSQ=0.9913;ERATE=0.0005;THETA=0.0025;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 77860881 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77860884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77860954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77860980 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0323;AVGPOST=0.9979;RSQ=0.9769;ERATE=0.0004;THETA=0.0009;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77860988 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9094;ERATE=0.0003;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77861003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7102;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77861034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1909;AVGPOST=0.9952;RSQ=0.9888;ERATE=0.0006;THETA=0.0036;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 77861038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0143;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77861077 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0128;AVGPOST=0.9991;RSQ=0.9706;ERATE=0.0006;THETA=0.0122;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77861232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9237;ERATE=0.0004;THETA=0.0059;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77861240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9268;ERATE=0.0004;THETA=0.0146;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77861241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9828;ERATE=0.0003;THETA=0.0141;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77861248 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9775;ERATE=0.0003;THETA=0.0092;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77861259 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0113;AVGPOST=0.9988;RSQ=0.9662;ERATE=0.0003;THETA=0.0061;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77861260 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77861288 . C CA 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5135;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77861312 . ATAT A 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5195;ERATE=0.0004;THETA=0.0115;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77861357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4345;ERATE=0.0005;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77861402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77861585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.929;LDAF=0.0910;AVGPOST=0.9848;RSQ=0.9345;ERATE=0.0016;THETA=0.0026;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 77861727 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9188;ERATE=0.0004;THETA=0.0134;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77861783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0249;AVGPOST=0.9969;RSQ=0.9562;ERATE=0.0005;THETA=0.0046;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 77861786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.907;LDAF=0.7261;AVGPOST=0.9469;RSQ=0.9105;ERATE=0.0077;THETA=0.0024;AC=1601;AN=2184 GT:DS:GL:BD 0.73305863 1
1 77861791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.895;LDAF=0.5926;AVGPOST=0.9362;RSQ=0.9117;ERATE=0.0059;THETA=0.0186;AC=1297;AN=2184 GT:DS:GL:BD 0.59386444 1
1 77861806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0121;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77861816 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.485;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77861873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.7943;ERATE=0.0004;THETA=0.0111;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77861893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9092;ERATE=0.0003;THETA=0.0143;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77861909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.947;LDAF=0.2757;AVGPOST=0.9575;RSQ=0.9240;ERATE=0.0028;THETA=0.0020;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 77861997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.939;LDAF=0.6489;AVGPOST=0.9553;RSQ=0.9319;ERATE=0.0017;THETA=0.0112;AC=1420;AN=2184 GT:DS:GL:BD 0.65018314 1
1 77862015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77862156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.925;LDAF=0.1801;AVGPOST=0.9687;RSQ=0.9228;ERATE=0.0010;THETA=0.0021;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 77862204 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0021;AVGPOST=0.9965;RSQ=0.3593;ERATE=0.0006;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77862304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6534;ERATE=0.0006;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77862306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.511;LDAF=0.0027;AVGPOST=0.9960;RSQ=0.4495;ERATE=0.0004;THETA=0.0069;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77862317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.954;LDAF=0.1081;AVGPOST=0.9870;RSQ=0.9518;ERATE=0.0011;THETA=0.0013;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 77862414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0046;AVGPOST=0.9965;RSQ=0.7620;ERATE=0.0006;THETA=0.0035;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77862418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0003;THETA=0.0062;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77862422 . AGAAAGGAAG A 4133 PASS INDEL;BAVGPOST=0.994;BRSQ=0.808;LDAF=0.0160;AVGPOST=0.9919;RSQ=0.8080;ERATE=0.0005;THETA=0.0034;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77862520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.915;LDAF=0.2893;AVGPOST=0.9631;RSQ=0.9198;ERATE=0.0161;THETA=0.0004;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 77862534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0599;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0026;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 77862579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77862580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8010;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77862610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9330;ERATE=0.0003;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77862668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3537;AVGPOST=0.9941;RSQ=0.9904;ERATE=0.0014;THETA=0.0010;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 77862678 rs61435656 GT G 20184 PASS INDEL;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3495;AVGPOST=0.9937;RSQ=0.9891;ERATE=0.0009;THETA=0.0003;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 77862697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77862704 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3528;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0009;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 77862730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2777;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 77862739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77862740 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77862765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.941;LDAF=0.3341;AVGPOST=0.9587;RSQ=0.9321;ERATE=0.0054;THETA=0.0009;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 77862880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.737;LDAF=0.0049;AVGPOST=0.9979;RSQ=0.8149;ERATE=0.0005;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77862912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1119;AVGPOST=0.9948;RSQ=0.9782;ERATE=0.0005;THETA=0.0009;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 77862974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0642;AVGPOST=0.9984;RSQ=0.9897;ERATE=0.0003;THETA=0.0010;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77863050 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0710;AVGPOST=0.9942;RSQ=0.9695;ERATE=0.0013;THETA=0.0002;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 77863087 . G GA 531 PASS INDEL;BAVGPOST=0.877;BRSQ=0.343;LDAF=0.1551;AVGPOST=0.8206;RSQ=0.4520;ERATE=0.0320;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 77863115 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.831;LDAF=0.2945;AVGPOST=0.9410;RSQ=0.8913;ERATE=0.0054;THETA=0.0004;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 77863133 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.651;LDAF=0.0188;AVGPOST=0.9847;RSQ=0.6923;ERATE=0.0010;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77863172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1152;AVGPOST=0.9915;RSQ=0.9689;ERATE=0.0013;THETA=0.0004;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 77863243 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3521;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0011;THETA=0.0003;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 77863282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0625;AVGPOST=0.9983;RSQ=0.9906;ERATE=0.0004;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 77863312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.3518;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 77863338 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5927;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77863340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.3378;AVGPOST=0.9915;RSQ=0.9851;ERATE=0.0011;THETA=0.0004;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 77863363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.462;LDAF=0.0043;AVGPOST=0.9941;RSQ=0.4520;ERATE=0.0008;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77863427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.3531;AVGPOST=0.9865;RSQ=0.9790;ERATE=0.0008;THETA=0.0005;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 77863451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.725;LDAF=0.0080;AVGPOST=0.9935;RSQ=0.6804;ERATE=0.0004;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77863456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9648;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77863478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0045;AVGPOST=0.9985;RSQ=0.8584;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77863489 . A AAT 59 PASS INDEL;BAVGPOST=0.998;BRSQ=0.382;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4482;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77863513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0096;AVGPOST=0.9981;RSQ=0.9391;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77863579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1112;AVGPOST=0.9967;RSQ=0.9865;ERATE=0.0007;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77863585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3502;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0007;THETA=0.0005;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 77863629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0600;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 77863648 rs10592269 G GT 1675 PASS INDEL;BAVGPOST=0.625;BRSQ=0.230;LDAF=0.7265;AVGPOST=0.7293;RSQ=0.4320;ERATE=0.0199;THETA=0.0006;AC=1766;AN=2184 GT:DS:GL:BD 0.80860806 1
1 77863712 . T TTG 919 PASS INDEL;BAVGPOST=0.892;BRSQ=0.705;LDAF=0.2161;AVGPOST=0.8956;RSQ=0.7740;ERATE=0.0018;THETA=0.0012;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 77863721 . T TG 2411 PASS INDEL;BAVGPOST=0.892;BRSQ=0.705;LDAF=0.2140;AVGPOST=0.9051;RSQ=0.7968;ERATE=0.0010;THETA=0.0005;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 77863722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.900;LDAF=0.0633;AVGPOST=0.9951;RSQ=0.9671;ERATE=0.0005;THETA=0.0009;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 77863752 rs71801325 CTG C 19130 PASS INDEL;BAVGPOST=0.980;BRSQ=0.961;LDAF=0.3466;AVGPOST=0.9909;RSQ=0.9864;ERATE=0.0005;THETA=0.0009;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 77863858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.935;LDAF=0.3409;AVGPOST=0.9850;RSQ=0.9752;ERATE=0.0007;THETA=0.0002;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 77863941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.932;LDAF=0.3417;AVGPOST=0.9867;RSQ=0.9773;ERATE=0.0005;THETA=0.0002;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 77863968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.0635;AVGPOST=0.9969;RSQ=0.9801;ERATE=0.0004;THETA=0.0006;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 77863998 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9426;ERATE=0.0003;THETA=0.0073;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77864410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.893;BRSQ=0.673;LDAF=0.1737;AVGPOST=0.9017;RSQ=0.7836;ERATE=0.0103;THETA=0.0009;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 77864622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.548;LDAF=0.0037;AVGPOST=0.9955;RSQ=0.5120;ERATE=0.0005;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77864646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.613;LDAF=0.0047;AVGPOST=0.9977;RSQ=0.7860;ERATE=0.0006;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77864889 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.1725;AVGPOST=0.9938;RSQ=0.9864;ERATE=0.0004;THETA=0.0040;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 77865052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4579;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77865112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.971;LDAF=0.1809;AVGPOST=0.9864;RSQ=0.9665;ERATE=0.0005;THETA=0.0032;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 77865117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0353;AVGPOST=0.9985;RSQ=0.9835;ERATE=0.0004;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77865195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8696;ERATE=0.0004;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77865208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.875;LDAF=0.0199;AVGPOST=0.9965;RSQ=0.9254;ERATE=0.0006;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77865276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0351;AVGPOST=0.9990;RSQ=0.9864;ERATE=0.0004;THETA=0.0011;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77865334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.862;LDAF=0.1581;AVGPOST=0.9693;RSQ=0.9284;ERATE=0.0005;THETA=0.0006;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 77865392 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.932;LDAF=0.2614;AVGPOST=0.9794;RSQ=0.9647;ERATE=0.0009;THETA=0.0005;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 77865439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.9616;AVGPOST=0.9977;RSQ=0.9781;ERATE=0.0004;THETA=0.0009;AC=2102;AN=2184 GT:DS:GL:BD 0.96245420 1
1 77865480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77865487 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6602;ERATE=0.0008;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77865508 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9572;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77865555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0350;AVGPOST=0.9990;RSQ=0.9864;ERATE=0.0004;THETA=0.0021;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77865588 . CTG C 272 PASS INDEL;BAVGPOST=0.988;BRSQ=0.768;LDAF=0.0255;AVGPOST=0.9832;RSQ=0.7341;ERATE=0.0038;THETA=0.0035;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77865607 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0221;AVGPOST=0.9987;RSQ=0.9742;ERATE=0.0004;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77865803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4322;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77865824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.630;LDAF=0.0051;AVGPOST=0.9965;RSQ=0.7068;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77865892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.1939;AVGPOST=0.9906;RSQ=0.9780;ERATE=0.0007;THETA=0.0032;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 77865943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.638;LDAF=0.0388;AVGPOST=0.9781;RSQ=0.7805;ERATE=0.0028;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77865946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.416;LDAF=0.0345;AVGPOST=0.9802;RSQ=0.7858;ERATE=0.0004;THETA=0.0012;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 77865992 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.617;LDAF=0.0183;AVGPOST=0.9817;RSQ=0.6005;ERATE=0.0016;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77866005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2298;AVGPOST=0.9876;RSQ=0.9743;ERATE=0.0007;THETA=0.0006;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 77866120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.967;LDAF=0.4962;AVGPOST=0.9772;RSQ=0.9659;ERATE=0.0014;THETA=0.0009;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 77866126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.810;LDAF=0.0383;AVGPOST=0.9790;RSQ=0.7880;ERATE=0.0054;THETA=0.0056;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77866193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5131;ERATE=0.0003;THETA=0.0069;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77866285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.8031;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77866317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4965;AVGPOST=0.9900;RSQ=0.9857;ERATE=0.0008;THETA=0.0005;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 77866501 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4325;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77866510 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.955;LDAF=0.2010;AVGPOST=0.9878;RSQ=0.9721;ERATE=0.0010;THETA=0.0003;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 77866567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.980;LDAF=0.5040;AVGPOST=0.9915;RSQ=0.9881;ERATE=0.0005;THETA=0.0006;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 77866623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.661;LDAF=0.0155;AVGPOST=0.9809;RSQ=0.5544;ERATE=0.0024;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77866691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.620;LDAF=0.0048;AVGPOST=0.9937;RSQ=0.5405;ERATE=0.0007;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77866718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.960;LDAF=0.5045;AVGPOST=0.9874;RSQ=0.9814;ERATE=0.0006;THETA=0.0048;AC=1106;AN=2184 GT:DS:GL:BD 0.50641024 1
1 77866879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.716;LDAF=0.0445;AVGPOST=0.9819;RSQ=0.8424;ERATE=0.0006;THETA=0.0011;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 77866880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5484;ERATE=0.0005;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77866900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.460;LDAF=0.0354;AVGPOST=0.9805;RSQ=0.7901;ERATE=0.0004;THETA=0.0040;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 77866936 rs58348201 C CA 14340 PASS INDEL;BAVGPOST=0.884;BRSQ=0.737;LDAF=0.3443;AVGPOST=0.8528;RSQ=0.7327;ERATE=0.0346;THETA=0.0009;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 77866963 . A AC 110 PASS INDEL;BAVGPOST=0.993;BRSQ=0.318;LDAF=0.0041;AVGPOST=0.9967;RSQ=0.6421;ERATE=0.0007;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77866971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0050;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0003;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77867117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0233;AVGPOST=0.9984;RSQ=0.9715;ERATE=0.0004;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 77867288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6181;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77867348 . G GA 37 PASS INDEL;BAVGPOST=0.991;BRSQ=0.455;LDAF=0.0073;AVGPOST=0.9940;RSQ=0.6902;ERATE=0.0006;THETA=0.0029;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77867520 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4843;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77867717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.946;LDAF=0.3111;AVGPOST=0.9809;RSQ=0.9680;ERATE=0.0009;THETA=0.0008;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 77867766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.643;LDAF=0.0346;AVGPOST=0.9780;RSQ=0.7694;ERATE=0.0009;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77867770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5016;ERATE=0.0004;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77867775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.585;LDAF=0.0088;AVGPOST=0.9894;RSQ=0.5693;ERATE=0.0007;THETA=0.0031;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77867866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.634;LDAF=0.0046;AVGPOST=0.9952;RSQ=0.6178;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77867896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.9066;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77867923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0352;AVGPOST=0.9987;RSQ=0.9839;ERATE=0.0003;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 77867924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.755;LDAF=0.0204;AVGPOST=0.9840;RSQ=0.7180;ERATE=0.0007;THETA=0.0044;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77867943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0015;AVGPOST=0.9975;RSQ=0.3511;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77868242 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9448;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77868245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.820;LDAF=0.0116;AVGPOST=0.9931;RSQ=0.7793;ERATE=0.0006;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77868262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7967;ERATE=0.0004;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77868453 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1734;AVGPOST=0.9901;RSQ=0.9781;ERATE=0.0006;THETA=0.0013;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 77868813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.655;LDAF=0.0298;AVGPOST=0.9788;RSQ=0.7373;ERATE=0.0006;THETA=0.0010;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 77869013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0029;AVGPOST=0.9957;RSQ=0.4122;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77869139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.953;LDAF=0.2399;AVGPOST=0.9799;RSQ=0.9596;ERATE=0.0010;THETA=0.0026;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 77869209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0370;AVGPOST=0.9952;RSQ=0.9462;ERATE=0.0005;THETA=0.0032;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 77869378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8377;ERATE=0.0003;THETA=0.0070;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77869452 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0174;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0004;THETA=0.0015;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77869461 rs3041868 GTTCAT G 7248 PASS INDEL;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0488;AVGPOST=0.9957;RSQ=0.9644;ERATE=0.0005;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 77869478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.5498;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77869515 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5267;AVGPOST=0.9914;RSQ=0.9886;ERATE=0.0005;THETA=0.0006;AC=1151;AN=2184 GT:DS:GL:BD 0.52701467 1
1 77869606 . A AC 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6108;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77869798 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0034;AVGPOST=0.9959;RSQ=0.5549;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77869820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.6963;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77869823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9371;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77870193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7536;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77870196 . CCTGT C 156 PASS INDEL;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77870254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77870257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7739;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77870301 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.954;LDAF=0.1024;AVGPOST=0.9885;RSQ=0.9619;ERATE=0.0005;THETA=0.0005;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 77870492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9391;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77870593 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77870643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.6665;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77870683 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8317;ERATE=0.0004;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77870684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.4105;AVGPOST=0.9885;RSQ=0.9853;ERATE=0.0006;THETA=0.0010;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 77870704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5240;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77870855 rs67349976 TCTAAG T 71135 PASS INDEL;BAVGPOST=0.966;BRSQ=0.943;LDAF=0.3890;AVGPOST=0.9519;RSQ=0.9346;ERATE=0.0129;THETA=0.0005;AC=857;AN=2184 GT:DS:GL:BD 0.39239928 0
1 77870910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77870997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77871081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77871101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.9668;AVGPOST=0.9960;RSQ=0.9547;ERATE=0.0005;THETA=0.0010;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 77871152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9253;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77871153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77871161 . CTAAG C 1110 PASS INDEL;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.9028;ERATE=0.0005;THETA=0.0037;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77871172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6996;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77871209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8422;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77871319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.2591;ERATE=0.0004;THETA=0.0023;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77871491 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6915;ERATE=0.0004;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77871494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7536;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77871542 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8156;ERATE=0.0007;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77871801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0176;AVGPOST=0.9983;RSQ=0.9602;ERATE=0.0005;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77871912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8091;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77871971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8076;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77872025 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77872039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9172;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77872043 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0172;AVGPOST=0.9980;RSQ=0.9537;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77872078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77872328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0297;AVGPOST=0.9956;RSQ=0.9468;ERATE=0.0004;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 77872418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77872465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77872510 . CCTT C 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77872620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9030;ERATE=0.0006;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77872670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0275;AVGPOST=0.9974;RSQ=0.9634;ERATE=0.0003;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77872674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77872783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7222;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77872920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77872921 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0167;AVGPOST=0.9984;RSQ=0.9650;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 77872977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77873021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5826;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0073;AVGPOST=0.9988;RSQ=0.9312;ERATE=0.0005;THETA=0.0023;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77873108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4197;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8053;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77873162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.7042;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77873278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6200;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6712;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77873418 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.788;LDAF=0.0055;AVGPOST=0.9980;RSQ=0.8370;ERATE=0.0005;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77873447 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873455 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9106;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77873585 . CATG C 165 PASS INDEL;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.7687;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77873654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.527;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.3607;ERATE=0.0008;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77873700 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0063;AVGPOST=0.9956;RSQ=0.7099;ERATE=0.0007;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77873863 rs67675093 A AG 27 PASS INDEL;BAVGPOST=0.973;BRSQ=0.292;LDAF=0.0568;AVGPOST=0.9177;RSQ=0.3751;ERATE=0.0074;THETA=0.0034;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77874129 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77874314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.710;LDAF=0.0130;AVGPOST=0.9922;RSQ=0.7613;ERATE=0.0007;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77874316 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77874437 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0069;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77874442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77874466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9194;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77874562 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0816;AVGPOST=0.9931;RSQ=0.9682;ERATE=0.0032;THETA=0.0013;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 77874620 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77874647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7461;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77874682 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0083;AVGPOST=0.9987;RSQ=0.9391;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77874753 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0089;AVGPOST=0.9994;RSQ=0.9668;ERATE=0.0004;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77874763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4687;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77874809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0109;AVGPOST=0.9979;RSQ=0.9258;ERATE=0.0005;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77874933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77874950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3900;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77874955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5647;ERATE=0.0006;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77874956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0022;AVGPOST=0.9968;RSQ=0.4931;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77874959 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.669;LDAF=0.0103;AVGPOST=0.9929;RSQ=0.6895;ERATE=0.0009;THETA=0.0083;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77875073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.934;LDAF=0.2970;AVGPOST=0.9644;RSQ=0.9349;ERATE=0.0120;THETA=0.0010;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 77875159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.1584;AVGPOST=0.9920;RSQ=0.9759;ERATE=0.0029;THETA=0.0006;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 77875191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77875222 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77875248 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.2697;AVGPOST=0.9903;RSQ=0.9826;ERATE=0.0013;THETA=0.0007;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 77875300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9753;AVGPOST=0.9996;RSQ=0.9938;ERATE=0.0004;THETA=0.0009;AC=2130;AN=2184 GT:DS:GL:BD 0.97527474 1
1 77875353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77875418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77875483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8864;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77875524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77875588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6236;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77875589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7070;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77875659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0005;THETA=0.0054;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77875686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77875687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.950;LDAF=0.9014;AVGPOST=0.9877;RSQ=0.9483;ERATE=0.0004;THETA=0.0008;AC=1975;AN=2184 GT:DS:GL:BD 0.90430403 1
1 77875693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6105;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77875725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7430;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77875870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8542;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77875915 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0259;AVGPOST=0.9978;RSQ=0.9686;ERATE=0.0005;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77875934 . T TA 902 PASS INDEL;BAVGPOST=0.992;BRSQ=0.859;LDAF=0.0281;AVGPOST=0.9977;RSQ=0.9715;ERATE=0.0005;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 77875934 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0103;AVGPOST=0.9974;RSQ=0.9046;ERATE=0.0005;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77875935 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0112;AVGPOST=0.9987;RSQ=0.9516;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77876008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.595;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.6753;ERATE=0.0005;THETA=0.0022;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77876045 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0112;AVGPOST=0.9981;RSQ=0.9308;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77876054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6353;ERATE=0.0007;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77876058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6554;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77876170 . A AC 1807 PASS INDEL;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0286;AVGPOST=0.9889;RSQ=0.8486;ERATE=0.0019;THETA=0.0010;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77876215 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.903;LDAF=0.0521;AVGPOST=0.9908;RSQ=0.9321;ERATE=0.0007;THETA=0.0025;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 77876221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77876263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5285;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77876397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0594;AVGPOST=0.9979;RSQ=0.9873;ERATE=0.0004;THETA=0.0011;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 77876407 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0157;AVGPOST=0.9963;RSQ=0.9292;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77876450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.819;LDAF=0.0114;AVGPOST=0.9974;RSQ=0.9206;ERATE=0.0006;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77876535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0094;AVGPOST=0.9990;RSQ=0.9575;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77876562 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0275;AVGPOST=0.9987;RSQ=0.9819;ERATE=0.0004;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77876614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77876646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77876734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9749;ERATE=0.0004;THETA=0.0025;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77876743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9366;ERATE=0.0005;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77876937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6848;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77877022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4520;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77877050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0095;AVGPOST=0.9938;RSQ=0.7461;ERATE=0.0008;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77877077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0005;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77877207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6108;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77877208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0627;AVGPOST=0.9951;RSQ=0.9699;ERATE=0.0008;THETA=0.0010;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 77877519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.884;LDAF=0.0192;AVGPOST=0.9949;RSQ=0.9027;ERATE=0.0009;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77877541 . ACT A 126 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0031;AVGPOST=0.9977;RSQ=0.7154;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77877618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6364;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0029;AC=1389;AN=2184 GT:DS:GL:BD 0.63598901 1
1 77877722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6440;AVGPOST=0.9965;RSQ=0.9940;ERATE=0.0008;THETA=0.0005;AC=1406;AN=2184 GT:DS:GL:BD 0.64377290 1
1 77877804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.947;LDAF=0.9647;AVGPOST=0.9927;RSQ=0.9300;ERATE=0.0026;THETA=0.0008;AC=2111;AN=2184 GT:DS:GL:BD 0.96657509 1
1 77877894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4555;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878006 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9241;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77878007 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.5888;AVGPOST=0.9914;RSQ=0.9873;ERATE=0.0026;THETA=0.0007;AC=1284;AN=2184 GT:DS:GL:BD 0.58791208 1
1 77878008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6823;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77878080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0153;AVGPOST=0.9978;RSQ=0.9412;ERATE=0.0006;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77878146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.9877;AVGPOST=0.9983;RSQ=0.9499;ERATE=0.0004;THETA=0.0014;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 77878433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9442;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77878486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7401;ERATE=0.0008;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77878501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77878504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77878548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6221;AVGPOST=0.9946;RSQ=0.9913;ERATE=0.0044;THETA=0.0007;AC=1357;AN=2184 GT:DS:GL:BD 0.62133700 1
1 77878699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1665;AVGPOST=0.9947;RSQ=0.9866;ERATE=0.0016;THETA=0.0008;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 77878817 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0657;AVGPOST=0.9982;RSQ=0.9881;ERATE=0.0010;THETA=0.0005;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 77878821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0028;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77879051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77879134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77879205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77879263 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7590;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77879274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6122;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77879417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.886;LDAF=0.0123;AVGPOST=0.9973;RSQ=0.9273;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77879484 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7646;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77879506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8888;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77879544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5038;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77879620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4441;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77879787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6008;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77879868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77879888 rs111227936 TG T 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6620;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77879922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8475;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77879946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77879976 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6713;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77879998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0335;AVGPOST=0.9997;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77880023 . C CT 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77880065 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0598;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 77880191 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77880192 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7261;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77880335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77880451 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0602;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 77880454 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77880516 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8588;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77880549 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77880564 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9604;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77880587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77880596 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77880599 . GAAGT G 233 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8902;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0075;AVGPOST=0.9993;RSQ=0.9699;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77880624 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77880679 . TCTTC T 205 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8460;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3673;AVGPOST=0.9964;RSQ=0.9941;ERATE=0.0006;THETA=0.0006;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 77880785 . A AAAT 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77880790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77880848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0056;AVGPOST=0.9972;RSQ=0.8276;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77880924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0415;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 77880931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8709;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77880941 rs113783690 AGTC A 179 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5423;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77880950 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5962;ERATE=0.0013;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7817;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77880994 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7440;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77881066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3695;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0007;THETA=0.0004;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 77881088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7355;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77881094 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8614;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77881099 rs35960780 TAA T 21151 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1903;AVGPOST=0.9977;RSQ=0.9935;ERATE=0.0008;THETA=0.0004;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 77881125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0037;AVGPOST=0.9974;RSQ=0.7760;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77881236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6343;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77881259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0870;AVGPOST=0.9968;RSQ=0.9863;ERATE=0.0004;THETA=0.0005;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 77881346 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.7951;AVGPOST=0.9823;RSQ=0.9595;ERATE=0.0053;THETA=0.0003;AC=1747;AN=2184 GT:DS:GL:BD 0.79990840 1
1 77881459 . CT C 520 PASS INDEL;BAVGPOST=0.975;BRSQ=0.681;LDAF=0.0473;AVGPOST=0.9777;RSQ=0.8240;ERATE=0.0008;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77881470 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.880;LDAF=0.0832;AVGPOST=0.9685;RSQ=0.8419;ERATE=0.0072;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77881476 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.611;LDAF=0.0054;AVGPOST=0.9953;RSQ=0.6445;ERATE=0.0009;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77881477 . A AG 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5673;ERATE=0.0009;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77881484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77881587 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9996;RSQ=0.9745;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77881611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8005;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77881621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8770;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77881657 . G GATGC 186 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7927;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77881707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77881741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7196;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=1572;AN=2184 GT:DS:GL:BD 0.71978021 1
1 77881945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7199;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77882048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7335;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77882075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8460;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77882100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7306;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77882135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1888;AVGPOST=0.9973;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 77882136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0193;AVGPOST=0.9994;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77882155 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5994;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7392;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77882212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3398;AVGPOST=0.9974;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 77882250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77882284 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0636;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 77882308 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8726;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77882351 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9230;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77882378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882419 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77882420 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77882422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77882448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0609;AVGPOST=0.9991;RSQ=0.9945;ERATE=0.0003;THETA=0.0007;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 77882459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6336;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7461;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882566 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0128;AVGPOST=0.9992;RSQ=0.9714;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77882665 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9285;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77882706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5826;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77882774 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0416;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 77882808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0623;AVGPOST=0.9993;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 77882874 . G GT 78 PASS INDEL;BAVGPOST=0.981;BRSQ=0.506;LDAF=0.0352;AVGPOST=0.9550;RSQ=0.4889;ERATE=0.0077;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77882878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8678;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77882892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0045;AVGPOST=0.9958;RSQ=0.6613;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77882909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0050;AVGPOST=0.9953;RSQ=0.6434;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77882948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7097;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77882990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.491;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5932;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77883005 . T TTTAC 668 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4839;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77883027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7308;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77883047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77883049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5745;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77883076 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5018;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77883130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.5877;ERATE=0.0021;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77883179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6669;ERATE=0.0011;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77883183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8897;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77883294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6439;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77883385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6971;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77883394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77883395 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9440;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77883407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8451;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77883496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77883602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8703;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77883623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0613;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 77883683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8292;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77883762 . C CATA 221 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6475;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77883777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9497;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77883803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7289;ERATE=0.0013;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77883887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77883904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0622;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 77883906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8296;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77883916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77883972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0610;AVGPOST=0.9994;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 77884084 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7712;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77884085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7283;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77884101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8201;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77884107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.3906;AVGPOST=0.9940;RSQ=0.9910;ERATE=0.0008;THETA=0.0004;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 77884147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77884234 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9382;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77884270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77884280 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5685;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77884290 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77884310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77884368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7880;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77884477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0476;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0010;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77884508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77884598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9538;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77884613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77884676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77884722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0083;AVGPOST=0.9981;RSQ=0.9148;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77884832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5360;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77884923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6535;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77884959 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1490;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 77885057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77885059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0146;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77885169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7013;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77885309 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1616;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 77885356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3973;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0013;THETA=0.0004;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 77885405 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0478;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77885452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0030;AVGPOST=0.9962;RSQ=0.5985;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77885551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77885604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77885618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.866;LDAF=0.0115;AVGPOST=0.9977;RSQ=0.9234;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77885781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77885822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5169;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77886061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77886067 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77886099 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3919;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0005;THETA=0.0004;AC=858;AN=2184 GT:DS:GL:BD 0.39285713 0
1 77886157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0977;AVGPOST=0.9982;RSQ=0.9916;ERATE=0.0005;THETA=0.0005;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 77886189 . CAT C 391 PASS INDEL;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7748;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77886307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1284;AVGPOST=0.9973;RSQ=0.9912;ERATE=0.0005;THETA=0.0003;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 77886362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77886600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5107;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77886687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8688;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77886703 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9503;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77886770 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0453;AVGPOST=0.9985;RSQ=0.9870;ERATE=0.0004;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 77886888 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77886988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6781;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77886989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1292;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 77887071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0145;AVGPOST=0.9992;RSQ=0.9773;ERATE=0.0003;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77887101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7396;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77887236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0273;AVGPOST=0.9991;RSQ=0.9847;ERATE=0.0004;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77887290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.426;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.4971;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77887297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.536;LDAF=0.0034;AVGPOST=0.9941;RSQ=0.2646;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77887399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4685;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77887456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8362;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77887463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0979;AVGPOST=0.9980;RSQ=0.9907;ERATE=0.0005;THETA=0.0003;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 77887489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77887500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77887548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7461;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77887589 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77887594 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77887641 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1490;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 77887825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.848;LDAF=0.0191;AVGPOST=0.9983;RSQ=0.9636;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77887924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8384;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77887926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77887998 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0325;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0009;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77888016 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77888087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9727;ERATE=0.0005;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77888171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.882;LDAF=0.0112;AVGPOST=0.9973;RSQ=0.9121;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77888325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0961;AVGPOST=0.9989;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 77888420 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77888637 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77888703 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9440;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77888709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9999;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77888716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0003;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77888758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0429;AVGPOST=0.9992;RSQ=0.9927;ERATE=0.0004;THETA=0.0008;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 77888813 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8819;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77888921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0102;AVGPOST=0.9987;RSQ=0.9403;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77888939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7711;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77888947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.2095;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77889064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0087;AVGPOST=0.9974;RSQ=0.8897;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77889093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0710;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0009;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 77889323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77889351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7547;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77889386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0193;AVGPOST=0.9980;RSQ=0.9554;ERATE=0.0005;THETA=0.0015;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77889391 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7800;AVGPOST=0.9939;RSQ=0.9852;ERATE=0.0010;THETA=0.0004;AC=1707;AN=2184 GT:DS:GL:BD 0.78159338 1
1 77889435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7167;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77889645 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5950;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77889714 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0005;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77889765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7666;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77889777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7437;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77889817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9525;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77889865 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9388;ERATE=0.0007;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77889870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5550;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77889888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77890007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7227;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77890020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77890027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1941;AVGPOST=0.9949;RSQ=0.9871;ERATE=0.0004;THETA=0.0004;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 77890035 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7649;AVGPOST=0.9987;RSQ=0.9967;ERATE=0.0005;THETA=0.0007;AC=1671;AN=2184 GT:DS:GL:BD 0.76510990 1
1 77890180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77890250 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0050;AVGPOST=0.9964;RSQ=0.7208;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77890337 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0267;AVGPOST=0.9980;RSQ=0.9651;ERATE=0.0007;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77890356 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77890418 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6227;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77890419 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0179;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77890473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77890570 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7528;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77890610 . CAGAG C 1728 PASS INDEL;BAVGPOST=0.996;BRSQ=0.883;LDAF=0.0136;AVGPOST=0.9970;RSQ=0.9113;ERATE=0.0007;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77890619 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77890853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77890873 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.943;LDAF=0.7921;AVGPOST=0.9819;RSQ=0.9585;ERATE=0.0016;THETA=0.0003;AC=1740;AN=2184 GT:DS:GL:BD 0.79670328 1
1 77890993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.5346;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77891030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0106;AVGPOST=0.9974;RSQ=0.9112;ERATE=0.0006;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77891083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9592;ERATE=0.0004;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77891109 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6335;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77891203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77891219 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0197;AVGPOST=0.9992;RSQ=0.9823;ERATE=0.0004;THETA=0.0014;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77891233 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77891281 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.954;LDAF=0.7459;AVGPOST=0.9734;RSQ=0.9478;ERATE=0.0029;THETA=0.0005;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 77891308 . A AAAAC 216 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0041;AVGPOST=0.9971;RSQ=0.7085;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77891350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7398;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77891368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6504;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77891411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0183;AVGPOST=0.9990;RSQ=0.9768;ERATE=0.0005;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77891448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0009;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77891507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0711;AVGPOST=0.9993;RSQ=0.9954;ERATE=0.0004;THETA=0.0008;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 77891518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1942;AVGPOST=0.9966;RSQ=0.9918;ERATE=0.0005;THETA=0.0004;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 77891525 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0125;AVGPOST=0.9987;RSQ=0.9601;ERATE=0.0005;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77891624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9285;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77891649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77891699 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7641;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0004;THETA=0.0008;AC=1669;AN=2184 GT:DS:GL:BD 0.76419413 1
1 77891782 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7637;AVGPOST=0.9971;RSQ=0.9928;ERATE=0.0009;THETA=0.0007;AC=1669;AN=2184 GT:DS:GL:BD 0.76419413 1
1 77891889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7819;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=1708;AN=2184 GT:DS:GL:BD 0.78205127 1
1 77892040 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6674;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77892063 . T TG 442 PASS INDEL;BAVGPOST=0.934;BRSQ=0.476;LDAF=0.0520;AVGPOST=0.9442;RSQ=0.6047;ERATE=0.0007;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77892088 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4676;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77892154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4523;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77892258 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77892296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7166;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77892338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77892634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8039;ERATE=0.0008;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77892695 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8069;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=1763;AN=2184 GT:DS:GL:BD 0.80723441 1
1 77892839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9990;RSQ=0.9715;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77892876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0142;AVGPOST=0.9982;RSQ=0.9541;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77892878 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8060;AVGPOST=0.9973;RSQ=0.9930;ERATE=0.0007;THETA=0.0007;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 77892889 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77892934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77892949 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77893073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77893107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0260;AVGPOST=0.9982;RSQ=0.9720;ERATE=0.0005;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 77893111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7803;AVGPOST=0.9952;RSQ=0.9880;ERATE=0.0009;THETA=0.0006;AC=1707;AN=2184 GT:DS:GL:BD 0.78159338 1
1 77893193 rs74163850 CT C 58933 PASS INDEL;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.7590;AVGPOST=0.9899;RSQ=0.9788;ERATE=0.0019;THETA=0.0005;AC=1659;AN=2184 GT:DS:GL:BD 0.75961536 1
1 77893211 . AC A 651 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9977;RSQ=0.8710;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77893407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7804;AVGPOST=0.9970;RSQ=0.9928;ERATE=0.0005;THETA=0.0004;AC=1707;AN=2184 GT:DS:GL:BD 0.78159338 1
1 77893439 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8059;AVGPOST=0.9967;RSQ=0.9918;ERATE=0.0005;THETA=0.0008;AC=1763;AN=2184 GT:DS:GL:BD 0.80723441 1
1 77893487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0289;AVGPOST=0.9989;RSQ=0.9851;ERATE=0.0004;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77893494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77893650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77893662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77893671 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77893677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0252;AVGPOST=0.9989;RSQ=0.9842;ERATE=0.0003;THETA=0.0083;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 77893694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9999;RSQ=0.9945;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77893747 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0139;AVGPOST=0.9977;RSQ=0.9332;ERATE=0.0004;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77893762 . T TA 247 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6342;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77893911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77893926 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7662;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0004;AC=1674;AN=2184 GT:DS:GL:BD 0.76648355 1
1 77893992 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1937;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0011;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 77894006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6930;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77894042 . TAA T 1304 PASS INDEL;BAVGPOST=0.992;BRSQ=0.753;LDAF=0.0185;AVGPOST=0.9882;RSQ=0.7577;ERATE=0.0006;THETA=0.0011;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77894145 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77894202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5490;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77894308 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77894390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0025;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77894397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9673;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77894403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77894432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0284;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77894475 . G GT 39 PASS INDEL;BAVGPOST=0.996;BRSQ=0.747;LDAF=0.0106;AVGPOST=0.9907;RSQ=0.6294;ERATE=0.0051;THETA=0.0017;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77894527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77894531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77894573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1429;AVGPOST=0.9973;RSQ=0.9919;ERATE=0.0003;THETA=0.0045;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 77894651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77894680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.385;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3883;ERATE=0.0010;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77894702 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5990;ERATE=0.0004;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77894775 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77894788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0138;AVGPOST=0.9951;RSQ=0.8725;ERATE=0.0005;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77894804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0139;AVGPOST=0.9977;RSQ=0.9458;ERATE=0.0003;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77895055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.2910;AVGPOST=0.9884;RSQ=0.9803;ERATE=0.0006;THETA=0.0016;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 77895061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8856;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77895065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.647;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7244;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77895095 . TTGTG T 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77895112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77895164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77895190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5326;ERATE=0.0007;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77895233 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7045;ERATE=0.0006;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77895245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7544;ERATE=0.0004;THETA=0.0078;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77895255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7442;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77895275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.502;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7540;ERATE=0.0004;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77895352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0145;AVGPOST=0.9988;RSQ=0.9679;ERATE=0.0004;THETA=0.0026;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77895423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0144;AVGPOST=0.9989;RSQ=0.9712;ERATE=0.0003;THETA=0.0026;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77895447 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0145;AVGPOST=0.9987;RSQ=0.9653;ERATE=0.0003;THETA=0.0052;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77895514 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.679;LDAF=0.0104;AVGPOST=0.9916;RSQ=0.6752;ERATE=0.0008;THETA=0.0075;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77895552 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.941;LDAF=0.1643;AVGPOST=0.9806;RSQ=0.9483;ERATE=0.0004;THETA=0.0072;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 77895555 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.336;LDAF=0.0126;AVGPOST=0.9819;RSQ=0.4417;ERATE=0.0010;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77895572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.792;LDAF=0.0160;AVGPOST=0.9960;RSQ=0.8922;ERATE=0.0005;THETA=0.0089;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77895574 . GTTC G 1319 PASS INDEL;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0160;AVGPOST=0.9987;RSQ=0.9686;ERATE=0.0004;THETA=0.0053;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77895672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6732;ERATE=0.0005;THETA=0.0055;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77895787 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.900;LDAF=0.0247;AVGPOST=0.9950;RSQ=0.9247;ERATE=0.0005;THETA=0.0035;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77895911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.487;LDAF=0.0092;AVGPOST=0.9927;RSQ=0.6685;ERATE=0.0008;THETA=0.0019;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77896011 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.553;BRSQ=0.288;LDAF=0.2526;AVGPOST=0.7670;RSQ=0.4600;ERATE=0.0016;THETA=0.0065;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 77896045 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.514;BRSQ=0.238;LDAF=0.3764;AVGPOST=0.6777;RSQ=0.3802;ERATE=0.0145;THETA=0.0074;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 77896065 . GCTC G 2821 PASS INDEL;BAVGPOST=0.453;BRSQ=0.221;LDAF=0.5207;AVGPOST=0.6521;RSQ=0.4004;ERATE=0.0088;THETA=0.0061;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 77896071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.615;BRSQ=0.123;LDAF=0.3102;AVGPOST=0.6453;RSQ=0.3144;ERATE=0.0080;THETA=0.0025;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 77896084 . T TCC 158 PASS INDEL;BAVGPOST=0.787;BRSQ=0.074;LDAF=0.1799;AVGPOST=0.7289;RSQ=0.2405;ERATE=0.0143;THETA=0.0016;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 77896088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.903;BRSQ=0.113;LDAF=0.0955;AVGPOST=0.8450;RSQ=0.2719;ERATE=0.0046;THETA=0.0055;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 77896103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.660;BRSQ=0.062;LDAF=0.2673;AVGPOST=0.6364;RSQ=0.1928;ERATE=0.0253;THETA=0.0069;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77896156 . CT C 1056 PASS INDEL;BAVGPOST=0.579;BRSQ=0.031;LDAF=0.7598;AVGPOST=0.6494;RSQ=0.1993;ERATE=0.0166;THETA=0.0049;AC=1962;AN=2184 GT:DS:GL:BD 0.89835167 1
1 77896168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.805;BRSQ=0.116;LDAF=0.1969;AVGPOST=0.7116;RSQ=0.2217;ERATE=0.0157;THETA=0.0023;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 77896186 . ACTC A 42 PASS INDEL;BAVGPOST=0.982;BRSQ=0.046;LDAF=0.0332;AVGPOST=0.9429;RSQ=0.2423;ERATE=0.0029;THETA=0.0124;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77896227 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.760;BRSQ=0.098;LDAF=0.1540;AVGPOST=0.7797;RSQ=0.2898;ERATE=0.0049;THETA=0.0036;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 77896298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.753;BRSQ=0.106;LDAF=0.2204;AVGPOST=0.6946;RSQ=0.2593;ERATE=0.0179;THETA=0.0049;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 77896303 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.735;BRSQ=0.100;LDAF=0.2240;AVGPOST=0.6933;RSQ=0.2329;ERATE=0.0164;THETA=0.0012;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 77896345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.895;BRSQ=0.135;LDAF=0.1331;AVGPOST=0.7832;RSQ=0.2092;ERATE=0.0157;THETA=0.0070;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 77896354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.843;BRSQ=0.141;LDAF=0.1593;AVGPOST=0.7541;RSQ=0.2322;ERATE=0.0146;THETA=0.0033;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77896355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.679;BRSQ=0.123;LDAF=0.2775;AVGPOST=0.6656;RSQ=0.2642;ERATE=0.0216;THETA=0.0023;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 77896365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.808;BRSQ=0.217;LDAF=0.1683;AVGPOST=0.7829;RSQ=0.3503;ERATE=0.0107;THETA=0.0014;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 77896391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.602;BRSQ=0.114;LDAF=0.3605;AVGPOST=0.6699;RSQ=0.3061;ERATE=0.0308;THETA=0.0045;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 77896405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.233;LDAF=0.0564;AVGPOST=0.9072;RSQ=0.2765;ERATE=0.0077;THETA=0.0059;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77896421 . GCCCACACTCC G 22082 PASS INDEL;BAVGPOST=0.904;BRSQ=0.157;LDAF=0.8798;AVGPOST=0.8135;RSQ=0.2932;ERATE=0.0133;THETA=0.0047;AC=2084;AN=2184 GT:DS:GL:BD 0.95421243 1
1 77896445 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.242;LDAF=0.1194;AVGPOST=0.8466;RSQ=0.4141;ERATE=0.0092;THETA=0.0021;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 77896468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.775;BRSQ=0.254;LDAF=0.1934;AVGPOST=0.7895;RSQ=0.4233;ERATE=0.0066;THETA=0.0034;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 77896491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.697;BRSQ=0.213;LDAF=0.2966;AVGPOST=0.7314;RSQ=0.3956;ERATE=0.0093;THETA=0.0012;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 77896510 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.221;LDAF=0.1265;AVGPOST=0.8266;RSQ=0.3734;ERATE=0.0148;THETA=0.0048;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 77896515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.576;BRSQ=0.228;LDAF=0.4202;AVGPOST=0.7084;RSQ=0.4414;ERATE=0.0195;THETA=0.0015;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 77896540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0070;AVGPOST=0.9982;RSQ=0.9122;ERATE=0.0003;THETA=0.0026;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77896838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7783;ERATE=0.0010;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77896911 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0113;AVGPOST=0.9975;RSQ=0.9204;ERATE=0.0003;THETA=0.0017;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77896997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.626;LDAF=0.9622;AVGPOST=0.9786;RSQ=0.7721;ERATE=0.0010;THETA=0.0022;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 77897042 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.574;LDAF=0.9136;AVGPOST=0.9174;RSQ=0.5803;ERATE=0.0154;THETA=0.0039;AC=2043;AN=2184 GT:DS:GL:BD 0.93543959 1
1 77897059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7428;ERATE=0.0004;THETA=0.0049;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77897164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6589;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77897168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77897212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.676;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8958;ERATE=0.0004;THETA=0.0045;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77897251 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0111;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77897327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0060;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77897329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0004;THETA=0.0148;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77897360 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.698;LDAF=0.0096;AVGPOST=0.9947;RSQ=0.7621;ERATE=0.0007;THETA=0.0016;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77897445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0003;THETA=0.0109;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77897454 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.393;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6005;ERATE=0.0005;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77897492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.890;LDAF=0.2030;AVGPOST=0.9768;RSQ=0.9497;ERATE=0.0007;THETA=0.0034;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 77897518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.899;LDAF=0.9302;AVGPOST=0.9912;RSQ=0.9538;ERATE=0.0004;THETA=0.0038;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 77897526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5697;ERATE=0.0006;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77897535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0299;AVGPOST=0.9977;RSQ=0.9678;ERATE=0.0004;THETA=0.0054;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77897751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.857;LDAF=0.0063;AVGPOST=0.9982;RSQ=0.8848;ERATE=0.0003;THETA=0.0060;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77897805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.699;LDAF=0.0755;AVGPOST=0.9499;RSQ=0.7224;ERATE=0.0157;THETA=0.0030;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 77897809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.909;LDAF=0.0100;AVGPOST=0.9981;RSQ=0.9215;ERATE=0.0005;THETA=0.0061;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77897943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0121;AVGPOST=0.9989;RSQ=0.9603;ERATE=0.0003;THETA=0.0060;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77897987 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0107;AVGPOST=0.9990;RSQ=0.9646;ERATE=0.0003;THETA=0.0036;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77898109 . TG T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77898110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.675;LDAF=0.0989;AVGPOST=0.9319;RSQ=0.6875;ERATE=0.0332;THETA=0.0053;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 77898115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3143;ERATE=0.0009;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77898377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.949;LDAF=0.7113;AVGPOST=0.9809;RSQ=0.9723;ERATE=0.0008;THETA=0.0029;AC=1557;AN=2184 GT:DS:GL:BD 0.71291208 1
1 77898415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.956;LDAF=0.7121;AVGPOST=0.9732;RSQ=0.9626;ERATE=0.0048;THETA=0.0088;AC=1560;AN=2184 GT:DS:GL:BD 0.71428573 1
1 77898522 . A AT 161 PASS INDEL;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7477;ERATE=0.0004;THETA=0.0071;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77898579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8254;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77898612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8504;ERATE=0.0003;THETA=0.0093;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77898691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0125;AVGPOST=0.9987;RSQ=0.9609;ERATE=0.0004;THETA=0.0040;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77898738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8972;ERATE=0.0003;THETA=0.0049;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77898831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.825;LDAF=0.1588;AVGPOST=0.9475;RSQ=0.8504;ERATE=0.0069;THETA=0.0037;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 77898852 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.901;BRSQ=0.752;LDAF=0.2811;AVGPOST=0.9048;RSQ=0.7999;ERATE=0.0274;THETA=0.0028;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 77899005 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0052;AVGPOST=0.9977;RSQ=0.8057;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77899141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.960;LDAF=0.4088;AVGPOST=0.9859;RSQ=0.9768;ERATE=0.0012;THETA=0.0006;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 77899257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.4124;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77899333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0061;AVGPOST=0.9968;RSQ=0.7698;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77899411 . AG A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3656;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77899471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0021;AVGPOST=0.9972;RSQ=0.4833;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77899487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0098;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77899521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.516;LDAF=0.0040;AVGPOST=0.9952;RSQ=0.5458;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77899729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.493;LDAF=0.0128;AVGPOST=0.9892;RSQ=0.6529;ERATE=0.0013;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77899738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0224;AVGPOST=0.9988;RSQ=0.9821;ERATE=0.0004;THETA=0.0020;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77899836 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.8441;AVGPOST=0.9947;RSQ=0.9842;ERATE=0.0004;THETA=0.0004;AC=1846;AN=2184 GT:DS:GL:BD 0.84523809 1
1 77899935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.959;LDAF=0.8208;AVGPOST=0.9809;RSQ=0.9480;ERATE=0.0041;THETA=0.0009;AC=1804;AN=2184 GT:DS:GL:BD 0.82600731 1
1 77900049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9080;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77900072 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0034;AVGPOST=0.9980;RSQ=0.7771;ERATE=0.0008;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77900080 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.561;LDAF=0.0065;AVGPOST=0.9916;RSQ=0.4923;ERATE=0.0016;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77900082 . GT G 674 PASS INDEL;BAVGPOST=0.902;BRSQ=0.432;LDAF=0.0962;AVGPOST=0.8935;RSQ=0.5323;ERATE=0.0042;THETA=0.0008;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 77900110 rs111778819 TG T 36217 PASS INDEL;BAVGPOST=0.972;BRSQ=0.946;LDAF=0.4312;AVGPOST=0.9591;RSQ=0.9340;ERATE=0.0093;THETA=0.0009;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 77900111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4181;AVGPOST=0.9889;RSQ=0.9835;ERATE=0.0019;THETA=0.0003;AC=911;AN=2184 GT:DS:GL:BD 0.41712454 0
1 77900149 . GTGTGTGCA G 367 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77900183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4141;AVGPOST=0.9963;RSQ=0.9941;ERATE=0.0005;THETA=0.0010;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 77900194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.723;LDAF=0.0379;AVGPOST=0.9663;RSQ=0.6566;ERATE=0.0162;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77900206 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.664;LDAF=0.0303;AVGPOST=0.9777;RSQ=0.7034;ERATE=0.0122;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 77900217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77900235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.744;LDAF=0.0073;AVGPOST=0.9972;RSQ=0.8411;ERATE=0.0006;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77900275 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.659;LDAF=0.0237;AVGPOST=0.9791;RSQ=0.6536;ERATE=0.0091;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77900288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77900516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0115;AVGPOST=0.9983;RSQ=0.9385;ERATE=0.0013;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77900600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.4102;AVGPOST=0.9908;RSQ=0.9852;ERATE=0.0012;THETA=0.0005;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 77900768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.800;LDAF=0.0409;AVGPOST=0.9761;RSQ=0.8011;ERATE=0.0062;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 77900817 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0077;AVGPOST=0.9944;RSQ=0.7454;ERATE=0.0013;THETA=0.0019;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77900841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.901;LDAF=0.0113;AVGPOST=0.9975;RSQ=0.9057;ERATE=0.0009;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77900848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0335;AVGPOST=0.9983;RSQ=0.9787;ERATE=0.0004;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77901028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0331;AVGPOST=0.9980;RSQ=0.9755;ERATE=0.0004;THETA=0.0020;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77901031 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0044;AVGPOST=0.9986;RSQ=0.8714;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77901039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7017;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77901092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77901144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9986;RSQ=0.3251;ERATE=0.0004;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77901262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4164;AVGPOST=0.9912;RSQ=0.9863;ERATE=0.0006;THETA=0.0109;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 77901325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9982;RSQ=0.9626;ERATE=0.0007;THETA=0.0019;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77901359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4213;ERATE=0.0005;THETA=0.0115;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77901377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6213;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77901384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.943;LDAF=0.0316;AVGPOST=0.9947;RSQ=0.9321;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77901461 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0221;AVGPOST=0.9991;RSQ=0.9823;ERATE=0.0004;THETA=0.0041;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77901623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0063;AVGPOST=0.9965;RSQ=0.7901;ERATE=0.0012;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77901679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.929;LDAF=0.0149;AVGPOST=0.9951;RSQ=0.8738;ERATE=0.0004;THETA=0.0052;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77901724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77901777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.968;LDAF=0.4198;AVGPOST=0.9755;RSQ=0.9645;ERATE=0.0005;THETA=0.0025;AC=917;AN=2184 GT:DS:GL:BD 0.41987181 0
1 77901781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.973;LDAF=0.2040;AVGPOST=0.9828;RSQ=0.9577;ERATE=0.0007;THETA=0.0287;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 77901784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6177;ERATE=0.0004;THETA=0.0119;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77901823 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.562;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0004;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77901887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0126;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77901911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0140;AVGPOST=0.9968;RSQ=0.9051;ERATE=0.0004;THETA=0.0175;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77901939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77901950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7315;ERATE=0.0006;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77901965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7944;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77901997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.657;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8046;ERATE=0.0004;THETA=0.0058;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77902133 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5570;ERATE=0.0006;THETA=0.0135;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77902151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.772;LDAF=0.0070;AVGPOST=0.9955;RSQ=0.7372;ERATE=0.0006;THETA=0.0047;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77902165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.836;LDAF=0.1624;AVGPOST=0.9444;RSQ=0.8452;ERATE=0.0043;THETA=0.0090;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 77902173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.730;LDAF=0.0359;AVGPOST=0.9830;RSQ=0.8088;ERATE=0.0021;THETA=0.0115;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 77902220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6580;ERATE=0.0004;THETA=0.0312;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77902221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.422;LDAF=0.0044;AVGPOST=0.9928;RSQ=0.3200;ERATE=0.0015;THETA=0.0147;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77902229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.858;BRSQ=0.709;LDAF=0.3165;AVGPOST=0.8677;RSQ=0.7690;ERATE=0.0096;THETA=0.0049;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 77902257 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.749;LDAF=0.1866;AVGPOST=0.9049;RSQ=0.7660;ERATE=0.0040;THETA=0.0096;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 77902260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3935;ERATE=0.0004;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77902287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.763;LDAF=0.0162;AVGPOST=0.9937;RSQ=0.8594;ERATE=0.0006;THETA=0.0065;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77902298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.673;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.6947;ERATE=0.0004;THETA=0.0051;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77902317 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.785;LDAF=0.0933;AVGPOST=0.9628;RSQ=0.8400;ERATE=0.0020;THETA=0.0168;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 77902436 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.459;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.3295;ERATE=0.0007;THETA=0.0163;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77902461 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0063;AVGPOST=0.9935;RSQ=0.6079;ERATE=0.0007;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77902478 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0044;AVGPOST=0.9969;RSQ=0.7096;ERATE=0.0005;THETA=0.0057;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77902481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4815;ERATE=0.0003;THETA=0.0113;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77902616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9143;ERATE=0.0003;THETA=0.0044;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77902645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.971;LDAF=0.4049;AVGPOST=0.9721;RSQ=0.9621;ERATE=0.0005;THETA=0.0039;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 77902651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.969;LDAF=0.4066;AVGPOST=0.9713;RSQ=0.9611;ERATE=0.0006;THETA=0.0020;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 77902655 . T TTG 681 PASS INDEL;BAVGPOST=0.655;BRSQ=0.258;LDAF=0.3104;AVGPOST=0.7103;RSQ=0.3936;ERATE=0.0298;THETA=0.0109;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 77902743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0038;AVGPOST=0.9972;RSQ=0.6895;ERATE=0.0006;THETA=0.0073;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77902787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6079;ERATE=0.0004;THETA=0.0067;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77902836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6306;ERATE=0.0005;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77902853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0123;AVGPOST=0.9992;RSQ=0.9724;ERATE=0.0003;THETA=0.0053;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77902869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0231;AVGPOST=0.9971;RSQ=0.9565;ERATE=0.0004;THETA=0.0045;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 77902882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0119;AVGPOST=0.9987;RSQ=0.9633;ERATE=0.0003;THETA=0.0046;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77902981 . ATTCC A 964 PASS INDEL;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0130;AVGPOST=0.9965;RSQ=0.9066;ERATE=0.0006;THETA=0.0102;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77903010 . TC T 938 PASS INDEL;BAVGPOST=0.940;BRSQ=0.533;LDAF=0.0872;AVGPOST=0.9149;RSQ=0.5501;ERATE=0.0171;THETA=0.0065;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 77903153 rs79427785 TTTCC T 20326 PASS INDEL;BAVGPOST=0.968;BRSQ=0.922;LDAF=0.2613;AVGPOST=0.9381;RSQ=0.8755;ERATE=0.0058;THETA=0.0088;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 77903188 . CCTTT C 1195 PASS INDEL;BAVGPOST=0.941;BRSQ=0.547;LDAF=0.0952;AVGPOST=0.8968;RSQ=0.5027;ERATE=0.0182;THETA=0.0028;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 77903245 . T TTCCC 4285 PASS INDEL;BAVGPOST=0.841;BRSQ=0.594;LDAF=0.2766;AVGPOST=0.8409;RSQ=0.6727;ERATE=0.0092;THETA=0.0056;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 77903261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0132;AVGPOST=0.9975;RSQ=0.9230;ERATE=0.0006;THETA=0.0044;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77903384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8433;ERATE=0.0004;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77903437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0635;AVGPOST=0.9934;RSQ=0.9592;ERATE=0.0005;THETA=0.0011;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 77903441 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8297;ERATE=0.0004;THETA=0.0038;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77903548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7087;ERATE=0.0008;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77903549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8559;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77903669 . C CT 34201 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8187;AVGPOST=0.9942;RSQ=0.9837;ERATE=0.0005;THETA=0.0015;AC=1790;AN=2184 GT:DS:GL:BD 0.81959707 1
1 77903699 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1349;AVGPOST=0.9982;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 77903716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1347;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0003;THETA=0.0006;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 77903767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1347;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 77903782 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0084;AVGPOST=0.9993;RSQ=0.9613;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77903855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77903876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9894;ERATE=0.0003;THETA=0.0011;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77903919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8745;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77904007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0691;AVGPOST=0.9964;RSQ=0.9808;ERATE=0.0015;THETA=0.0009;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 77904058 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77904075 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.3921;ERATE=0.0008;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77904135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4358;ERATE=0.0013;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77904157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5808;AVGPOST=0.9902;RSQ=0.9850;ERATE=0.0006;THETA=0.0023;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 77904186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5703;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77904216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0271;AVGPOST=0.9973;RSQ=0.9594;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77904239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.5807;AVGPOST=0.9910;RSQ=0.9862;ERATE=0.0010;THETA=0.0005;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 77904243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5819;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77904253 . T TC 8803 PASS INDEL;BAVGPOST=0.918;BRSQ=0.878;LDAF=0.5177;AVGPOST=0.9165;RSQ=0.8909;ERATE=0.0042;THETA=0.0005;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 77904334 rs34727240 C CA 43518 PASS INDEL;BAVGPOST=0.957;BRSQ=0.933;LDAF=0.5795;AVGPOST=0.9795;RSQ=0.9698;ERATE=0.0006;THETA=0.0002;AC=1274;AN=2184 GT:DS:GL:BD 0.58333331 1
1 77904336 . A AC 9857 PASS INDEL;BAVGPOST=0.926;BRSQ=0.886;LDAF=0.5090;AVGPOST=0.9147;RSQ=0.8862;ERATE=0.0056;THETA=0.0012;AC=1138;AN=2184 GT:DS:GL:BD 0.52106225 1
1 77904338 . A AC 9816 PASS INDEL;BAVGPOST=0.924;BRSQ=0.880;LDAF=0.4956;AVGPOST=0.9047;RSQ=0.8701;ERATE=0.0087;THETA=0.0004;AC=1115;AN=2184 GT:DS:GL:BD 0.51053113 1
1 77904339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9247;ERATE=0.0004;THETA=0.0040;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77904381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0271;AVGPOST=0.9979;RSQ=0.9688;ERATE=0.0005;THETA=0.0011;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77904423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.6431;AVGPOST=0.9941;RSQ=0.9907;ERATE=0.0004;THETA=0.0025;AC=1406;AN=2184 GT:DS:GL:BD 0.64377290 1
1 77904471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5814;AVGPOST=0.9910;RSQ=0.9862;ERATE=0.0011;THETA=0.0007;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 77904588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.991;LDAF=0.5734;AVGPOST=0.9925;RSQ=0.9885;ERATE=0.0008;THETA=0.0020;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 77904643 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9860;ERATE=0.0003;THETA=0.0020;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77904658 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0003;THETA=0.0026;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77904672 . ATTC A 7572 PASS INDEL;BAVGPOST=0.972;BRSQ=0.865;LDAF=0.0902;AVGPOST=0.9640;RSQ=0.8444;ERATE=0.0007;THETA=0.0013;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 77904673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6379;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77904687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.954;LDAF=0.0621;AVGPOST=0.9944;RSQ=0.9641;ERATE=0.0004;THETA=0.0028;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 77904797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0611;AVGPOST=0.9959;RSQ=0.9738;ERATE=0.0005;THETA=0.0032;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 77904811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.725;LDAF=0.0108;AVGPOST=0.9947;RSQ=0.8045;ERATE=0.0004;THETA=0.0066;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77904918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0676;AVGPOST=0.9973;RSQ=0.9832;ERATE=0.0004;THETA=0.0016;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 77904947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7484;ERATE=0.0004;THETA=0.0073;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77904976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77904983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0117;AVGPOST=0.9985;RSQ=0.9436;ERATE=0.0005;THETA=0.0027;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77905017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7618;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77905055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.953;LDAF=0.1137;AVGPOST=0.9910;RSQ=0.9633;ERATE=0.0007;THETA=0.0079;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 77905246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5183;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77905304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0228;AVGPOST=0.9976;RSQ=0.9578;ERATE=0.0006;THETA=0.0043;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77905346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.916;LDAF=0.3819;AVGPOST=0.9436;RSQ=0.9149;ERATE=0.0064;THETA=0.0062;AC=822;AN=2184 GT:DS:GL:BD 0.37637362 0
1 77905386 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4332;ERATE=0.0005;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77905441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.7118;ERATE=0.0005;THETA=0.0094;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77905453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.744;LDAF=0.0076;AVGPOST=0.9932;RSQ=0.6531;ERATE=0.0016;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77905490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0100;AVGPOST=0.9976;RSQ=0.9046;ERATE=0.0005;THETA=0.0022;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77905573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.788;LDAF=0.0085;AVGPOST=0.9960;RSQ=0.7941;ERATE=0.0016;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77905649 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9991;RSQ=0.9830;ERATE=0.0003;THETA=0.0085;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77905653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.956;LDAF=0.0483;AVGPOST=0.9939;RSQ=0.9539;ERATE=0.0006;THETA=0.0106;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77905688 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.863;LDAF=0.2958;AVGPOST=0.9223;RSQ=0.8542;ERATE=0.0256;THETA=0.0049;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 77905911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0152;AVGPOST=0.9963;RSQ=0.9002;ERATE=0.0009;THETA=0.0019;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77905939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0188;AVGPOST=0.9988;RSQ=0.9708;ERATE=0.0004;THETA=0.0017;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77906019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8517;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77906032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77906060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0047;AVGPOST=0.9983;RSQ=0.8604;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77906061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.927;LDAF=0.1969;AVGPOST=0.9652;RSQ=0.9206;ERATE=0.0042;THETA=0.0071;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 77906076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9220;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77906108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0497;AVGPOST=0.9956;RSQ=0.9654;ERATE=0.0004;THETA=0.0016;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77906145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0130;AVGPOST=0.9989;RSQ=0.9640;ERATE=0.0003;THETA=0.0048;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77906197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77906372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0475;AVGPOST=0.9978;RSQ=0.9801;ERATE=0.0004;THETA=0.0021;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 77906395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0055;AVGPOST=0.9948;RSQ=0.6490;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77906495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.780;LDAF=0.0095;AVGPOST=0.9933;RSQ=0.7438;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77906539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0071;AVGPOST=0.9963;RSQ=0.7742;ERATE=0.0005;THETA=0.0098;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77906549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0666;AVGPOST=0.9975;RSQ=0.9828;ERATE=0.0005;THETA=0.0006;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 77906640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0666;AVGPOST=0.9981;RSQ=0.9879;ERATE=0.0004;THETA=0.0065;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 77906670 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4230;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77906745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7145;ERATE=0.0004;THETA=0.0042;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77906753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.2255;AVGPOST=0.9909;RSQ=0.9797;ERATE=0.0004;THETA=0.0011;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 77906836 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9653;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77906907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9637;ERATE=0.0005;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77906908 . C CGA 206 PASS INDEL;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77906949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0044;AVGPOST=0.9981;RSQ=0.8368;ERATE=0.0006;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77907052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0129;AVGPOST=0.9978;RSQ=0.9349;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77907132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.526;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3607;ERATE=0.0008;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77907138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6564;ERATE=0.0007;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77907394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0126;AVGPOST=0.9977;RSQ=0.9161;ERATE=0.0009;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77907507 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0107;AVGPOST=0.9958;RSQ=0.8532;ERATE=0.0006;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77907551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7692;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77907623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0480;AVGPOST=0.9984;RSQ=0.9844;ERATE=0.0005;THETA=0.0013;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77907711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0826;AVGPOST=0.9945;RSQ=0.9750;ERATE=0.0006;THETA=0.0010;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 77907789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6859;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77907816 rs59850823 CGTG C 1348 PASS INDEL;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0172;AVGPOST=0.9954;RSQ=0.9012;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77907816 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0074;AVGPOST=0.9959;RSQ=0.7927;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77907817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0072;AVGPOST=0.9989;RSQ=0.9332;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77907843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.580;LDAF=0.0531;AVGPOST=0.9438;RSQ=0.5417;ERATE=0.0229;THETA=0.0018;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77907844 . TC T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3207;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77907863 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.568;LDAF=0.0072;AVGPOST=0.9945;RSQ=0.7019;ERATE=0.0008;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77907926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.5775;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77907937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0102;AVGPOST=0.9960;RSQ=0.8445;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77908005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5730;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77908038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0078;AVGPOST=0.9949;RSQ=0.7632;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77908157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5205;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77908256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0205;AVGPOST=0.9925;RSQ=0.8622;ERATE=0.0004;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77908304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0186;AVGPOST=0.9966;RSQ=0.9275;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77908317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77908326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5070;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77908588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.867;LDAF=0.0095;AVGPOST=0.9968;RSQ=0.8527;ERATE=0.0007;THETA=0.0041;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77908620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0215;AVGPOST=0.9984;RSQ=0.9683;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77908639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.980;LDAF=0.2159;AVGPOST=0.9932;RSQ=0.9843;ERATE=0.0006;THETA=0.0004;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 77908779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5645;ERATE=0.0006;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77908886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6366;ERATE=0.0013;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77908902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77909129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77909152 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77909197 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0663;AVGPOST=0.9981;RSQ=0.9893;ERATE=0.0003;THETA=0.0007;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 77909216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5410;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77909392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1173;AVGPOST=0.9990;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 77909393 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0936;AVGPOST=0.9973;RSQ=0.9870;ERATE=0.0004;THETA=0.0009;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 77909493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7547;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77909508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0039;AVGPOST=0.9971;RSQ=0.7199;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77909631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1260;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0005;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 77909730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0079;AVGPOST=0.9994;RSQ=0.9624;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77909789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0061;AVGPOST=0.9969;RSQ=0.8316;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77909826 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0076;AVGPOST=0.9980;RSQ=0.8933;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77909941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0104;AVGPOST=0.9986;RSQ=0.9429;ERATE=0.0004;THETA=0.0030;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77910026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.1950;AVGPOST=0.9909;RSQ=0.9777;ERATE=0.0012;THETA=0.0002;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 77910108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5189;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77910120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9990;RSQ=0.9838;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 77910130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0927;AVGPOST=0.9985;RSQ=0.9933;ERATE=0.0003;THETA=0.0027;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 77910145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6343;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77910194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.6710;AVGPOST=0.9943;RSQ=0.9913;ERATE=0.0004;THETA=0.0002;AC=1466;AN=2184 GT:DS:GL:BD 0.67124540 1
1 77910405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1931;AVGPOST=0.9941;RSQ=0.9869;ERATE=0.0004;THETA=0.0003;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 77910442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.959;LDAF=0.1892;AVGPOST=0.9920;RSQ=0.9823;ERATE=0.0002;THETA=0.0003;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 77910443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7356;ERATE=0.0003;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77910449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7427;ERATE=0.0002;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77910595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8799;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77910631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1936;AVGPOST=0.9969;RSQ=0.9925;ERATE=0.0004;THETA=0.0003;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 77910636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0771;AVGPOST=0.9979;RSQ=0.9895;ERATE=0.0005;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77910672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4468;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77910756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8101;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77910766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7490;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77910782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5193;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77910804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0558;AVGPOST=0.9950;RSQ=0.9683;ERATE=0.0004;THETA=0.0001;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 77911059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.665;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8676;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77911075 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7063;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1544;AN=2184 GT:DS:GL:BD 0.70695972 1
1 77911084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0394;AVGPOST=0.9987;RSQ=0.9862;ERATE=0.0003;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77911096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77911140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77911150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0062;AVGPOST=0.9957;RSQ=0.7301;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77911337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2911;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0007;THETA=0.0004;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 77911345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0295;AVGPOST=0.9972;RSQ=0.9587;ERATE=0.0005;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77911358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0033;AVGPOST=0.9967;RSQ=0.5994;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77911368 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.846;LDAF=0.0457;AVGPOST=0.9820;RSQ=0.8572;ERATE=0.0009;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 77911444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0153;AVGPOST=0.9975;RSQ=0.9356;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77911448 rs35640419 TC T 892 PASS INDEL;BAVGPOST=0.969;BRSQ=0.896;LDAF=0.1635;AVGPOST=0.9756;RSQ=0.9390;ERATE=0.0009;THETA=0.0007;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 77911500 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.935;LDAF=0.1749;AVGPOST=0.9822;RSQ=0.9576;ERATE=0.0005;THETA=0.0004;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 77911504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.937;LDAF=0.1767;AVGPOST=0.9818;RSQ=0.9570;ERATE=0.0007;THETA=0.0004;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 77911505 rs34553632 A AG 4402 PASS INDEL;BAVGPOST=0.976;BRSQ=0.926;LDAF=0.1777;AVGPOST=0.9840;RSQ=0.9626;ERATE=0.0003;THETA=0.0007;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 77911505 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0148;AVGPOST=0.9958;RSQ=0.8806;ERATE=0.0008;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77911537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.431;LDAF=0.0056;AVGPOST=0.9918;RSQ=0.3847;ERATE=0.0014;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77911549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.720;LDAF=0.0123;AVGPOST=0.9985;RSQ=0.9442;ERATE=0.0002;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77911574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.914;LDAF=0.0846;AVGPOST=0.9952;RSQ=0.9760;ERATE=0.0005;THETA=0.0002;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 77911578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.894;LDAF=0.0858;AVGPOST=0.9945;RSQ=0.9719;ERATE=0.0005;THETA=0.0003;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77911604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.897;LDAF=0.0876;AVGPOST=0.9934;RSQ=0.9657;ERATE=0.0008;THETA=0.0014;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 77911609 . A AG 1238 PASS INDEL;BAVGPOST=0.983;BRSQ=0.898;LDAF=0.0922;AVGPOST=0.9936;RSQ=0.9667;ERATE=0.0011;THETA=0.0005;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 77911629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2461;AVGPOST=0.9935;RSQ=0.9868;ERATE=0.0006;THETA=0.0003;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 77911650 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.966;LDAF=0.0915;AVGPOST=0.9976;RSQ=0.9890;ERATE=0.0005;THETA=0.0005;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 77911658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.967;LDAF=0.0910;AVGPOST=0.9984;RSQ=0.9920;ERATE=0.0004;THETA=0.0020;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 77911663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7049;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 77911760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.845;LDAF=0.0136;AVGPOST=0.9908;RSQ=0.7449;ERATE=0.0040;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77911761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0758;AVGPOST=0.9977;RSQ=0.9878;ERATE=0.0004;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77911808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0945;AVGPOST=0.9971;RSQ=0.9871;ERATE=0.0004;THETA=0.0006;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 77911849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0928;AVGPOST=0.9989;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 77911893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77911995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5538;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77911998 . CAG C 70 PASS INDEL;BAVGPOST=0.994;BRSQ=0.636;LDAF=0.0170;AVGPOST=0.9803;RSQ=0.5395;ERATE=0.0041;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77912021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0927;AVGPOST=0.9988;RSQ=0.9940;ERATE=0.0003;THETA=0.0012;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 77912150 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0924;AVGPOST=0.9985;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 77912224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0928;AVGPOST=0.9976;RSQ=0.9886;ERATE=0.0004;THETA=0.0002;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 77912239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0923;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0002;THETA=0.0002;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 77912277 . GA G 2089 PASS INDEL;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1190;AVGPOST=0.9924;RSQ=0.9715;ERATE=0.0011;THETA=0.0056;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 77912314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.764;LDAF=0.1002;AVGPOST=0.9707;RSQ=0.8733;ERATE=0.0020;THETA=0.0003;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 77912355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.679;LDAF=0.0768;AVGPOST=0.9832;RSQ=0.9192;ERATE=0.0004;THETA=0.0063;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 77912401 rs35136183 A AT 1207 PASS INDEL;BAVGPOST=0.979;BRSQ=0.813;LDAF=0.0723;AVGPOST=0.9834;RSQ=0.9094;ERATE=0.0007;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 77912483 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.6993;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77912541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5955;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77912611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0945;AVGPOST=0.9952;RSQ=0.9772;ERATE=0.0008;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 77912650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0265;AVGPOST=0.9969;RSQ=0.9549;ERATE=0.0004;THETA=0.0012;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 77912667 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0111;AVGPOST=0.9971;RSQ=0.8813;ERATE=0.0005;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77912680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2890;AVGPOST=0.9914;RSQ=0.9834;ERATE=0.0007;THETA=0.0006;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 77912784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0042;AVGPOST=0.9928;RSQ=0.3562;ERATE=0.0006;THETA=0.0088;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77912791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0708;AVGPOST=0.9957;RSQ=0.9730;ERATE=0.0005;THETA=0.0005;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 77912920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.944;LDAF=0.5850;AVGPOST=0.9653;RSQ=0.9506;ERATE=0.0024;THETA=0.0056;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 77912948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.932;LDAF=0.1193;AVGPOST=0.9679;RSQ=0.8748;ERATE=0.0018;THETA=0.0011;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 77913100 rs113392155 TGACA T 138 PASS INDEL;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0078;AVGPOST=0.9899;RSQ=0.4886;ERATE=0.0008;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77913224 . ATG A 238 PASS INDEL;BAVGPOST=0.984;BRSQ=0.654;LDAF=0.0415;AVGPOST=0.9524;RSQ=0.5019;ERATE=0.0158;THETA=0.0031;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 77913291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4899;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77913489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0041;AVGPOST=0.9967;RSQ=0.6443;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77913530 . G GTCTC 233 PASS INDEL;BAVGPOST=0.997;BRSQ=0.720;LDAF=0.0082;AVGPOST=0.9928;RSQ=0.6798;ERATE=0.0003;THETA=0.0030;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77913561 . CTA C 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5281;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77913579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4247;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77913612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8582;ERATE=0.0003;THETA=0.0045;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77913624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8690;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77913675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77913686 . CAG C 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4034;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77913693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2780;AVGPOST=0.9917;RSQ=0.9842;ERATE=0.0012;THETA=0.0005;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 77913755 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.926;LDAF=0.0364;AVGPOST=0.9950;RSQ=0.9485;ERATE=0.0005;THETA=0.0030;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 77913790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.1842;AVGPOST=0.9945;RSQ=0.9861;ERATE=0.0006;THETA=0.0034;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 77913791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77913893 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77913983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0559;AVGPOST=0.9979;RSQ=0.9838;ERATE=0.0003;THETA=0.0005;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 77914033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0044;AVGPOST=0.9971;RSQ=0.7572;ERATE=0.0005;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77914035 . A AG 8900 PASS INDEL;BAVGPOST=0.959;BRSQ=0.404;LDAF=0.9254;AVGPOST=0.8993;RSQ=0.4100;ERATE=0.0129;THETA=0.0051;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 77914098 rs74312750 G GT 47745 PASS INDEL;BAVGPOST=0.997;BRSQ=0.468;LDAF=0.9984;AVGPOST=0.9968;RSQ=0.1716;ERATE=0.0006;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 77914100 . C CT 1015 PASS INDEL;BAVGPOST=0.472;BRSQ=0.079;LDAF=0.3795;AVGPOST=0.5948;RSQ=0.2360;ERATE=0.0437;THETA=0.0013;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 77914129 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6061;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77914522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4061;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77914523 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.7713;ERATE=0.0007;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77914529 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7499;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77914676 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9194;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77914817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7278;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77914905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4362;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77914910 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.741;LDAF=0.0156;AVGPOST=0.9903;RSQ=0.7723;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77914939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2671;AVGPOST=0.9942;RSQ=0.9882;ERATE=0.0008;THETA=0.0002;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 77914999 . CAT C 11604 PASS INDEL;BAVGPOST=0.934;BRSQ=0.885;LDAF=0.6365;AVGPOST=0.8412;RSQ=0.7383;ERATE=0.0195;THETA=0.0009;AC=1462;AN=2184 GT:DS:GL:BD 0.66941392 1
1 77915039 . ATT A 125 PASS INDEL;BAVGPOST=0.814;BRSQ=0.086;LDAF=0.2138;AVGPOST=0.7071;RSQ=0.2695;ERATE=0.0322;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 77915089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.186;LDAF=0.0556;AVGPOST=0.9255;RSQ=0.4350;ERATE=0.0040;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77915105 . TTA T 1484 PASS INDEL;BAVGPOST=0.717;BRSQ=0.108;LDAF=0.2918;AVGPOST=0.6483;RSQ=0.2646;ERATE=0.0460;THETA=0.0004;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 77915162 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.131;LDAF=0.0409;AVGPOST=0.9409;RSQ=0.4129;ERATE=0.0028;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77915171 rs3066883 T TTA 5017 PASS INDEL;BAVGPOST=0.633;BRSQ=0.231;LDAF=0.3378;AVGPOST=0.6919;RSQ=0.4163;ERATE=0.0315;THETA=0.0002;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 77915179 . T TAC 1004 PASS INDEL;BAVGPOST=0.656;BRSQ=0.190;LDAF=0.2940;AVGPOST=0.7447;RSQ=0.4948;ERATE=0.0205;THETA=0.0010;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 77915188 rs36161296 T TTA 267 PASS INDEL;BAVGPOST=0.941;BRSQ=0.162;LDAF=0.0939;AVGPOST=0.8621;RSQ=0.3466;ERATE=0.0097;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 77915211 . TTA T 331 PASS INDEL;BAVGPOST=0.915;BRSQ=0.200;LDAF=0.1277;AVGPOST=0.8281;RSQ=0.4002;ERATE=0.0106;THETA=0.0006;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 77915241 . A AT 633 PASS INDEL;BAVGPOST=0.874;BRSQ=0.202;LDAF=0.1560;AVGPOST=0.7936;RSQ=0.3643;ERATE=0.0174;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 77915257 . TTA T 567 PASS INDEL;BAVGPOST=0.924;BRSQ=0.201;LDAF=0.0954;AVGPOST=0.8763;RSQ=0.4448;ERATE=0.0099;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 77915272 . A ATT 82 PASS INDEL;BAVGPOST=0.985;BRSQ=0.237;LDAF=0.0312;AVGPOST=0.9590;RSQ=0.4575;ERATE=0.0036;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77915300 . TTA T 8685 PASS INDEL;BAVGPOST=0.761;BRSQ=0.598;LDAF=0.5541;AVGPOST=0.7615;RSQ=0.6074;ERATE=0.0240;THETA=0.0004;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 77915301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.844;BRSQ=0.314;LDAF=0.1932;AVGPOST=0.8011;RSQ=0.4864;ERATE=0.0184;THETA=0.0004;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 77915321 . T TAC 640 PASS INDEL;BAVGPOST=0.918;BRSQ=0.416;LDAF=0.0718;AVGPOST=0.9750;RSQ=0.8572;ERATE=0.0015;THETA=0.0002;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 77915331 . TA T 502 PASS INDEL;BAVGPOST=0.977;BRSQ=0.728;LDAF=0.0449;AVGPOST=0.9816;RSQ=0.8418;ERATE=0.0018;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 77915342 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.783;BRSQ=0.334;LDAF=0.2565;AVGPOST=0.7276;RSQ=0.4101;ERATE=0.0464;THETA=0.0005;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 77915343 . TA T 489 PASS INDEL;BAVGPOST=0.979;BRSQ=0.751;LDAF=0.0395;AVGPOST=0.9853;RSQ=0.8570;ERATE=0.0010;THETA=0.0008;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 77915344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.405;LDAF=0.0391;AVGPOST=0.9599;RSQ=0.5846;ERATE=0.0023;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77915364 . T TAC 551 PASS INDEL;BAVGPOST=0.921;BRSQ=0.305;LDAF=0.1553;AVGPOST=0.8062;RSQ=0.4302;ERATE=0.0190;THETA=0.0004;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 77915364 . C CAT 134 PASS INDEL;BAVGPOST=0.987;BRSQ=0.316;LDAF=0.0271;AVGPOST=0.9708;RSQ=0.5466;ERATE=0.0024;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77915369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3769;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77915497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8611;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77915508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7487;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77915585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6449;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77915646 . TG T 346 PASS INDEL;BAVGPOST=0.926;BRSQ=0.422;LDAF=0.1054;AVGPOST=0.8745;RSQ=0.4860;ERATE=0.0198;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 77915675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77915694 . G GT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77915705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0928;AVGPOST=0.9983;RSQ=0.9920;ERATE=0.0004;THETA=0.0002;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 77915769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.8047;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77915794 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4895;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77915838 . G GA 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6743;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77915858 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7418;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77915872 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2893;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 77915907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77915947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0205;AVGPOST=0.9948;RSQ=0.9013;ERATE=0.0005;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77915948 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77915968 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77916072 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0934;AVGPOST=0.9976;RSQ=0.9890;ERATE=0.0006;THETA=0.0003;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 77916207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2691;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 77916231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77916235 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77916339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7707;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77916424 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0941;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 77916524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77916582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0371;AVGPOST=0.9976;RSQ=0.9776;ERATE=0.0004;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77916638 . GT G 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6408;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77916758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7002;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77916838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77916889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3705;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77917117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77917168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77917200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8771;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77917227 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9688;ERATE=0.0003;THETA=0.0012;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77917323 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0045;AVGPOST=0.9953;RSQ=0.6077;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77917326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0036;AVGPOST=0.9965;RSQ=0.6455;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77917327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8612;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77917363 . TGAGTA T 7486 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0271;AVGPOST=0.9991;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77917436 . GTA G 328 PASS INDEL;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8307;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77917479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9328;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77917498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77917504 . ATGTGTGTG A 211 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77917519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0108;AVGPOST=0.9973;RSQ=0.9165;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77917736 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0206;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77917864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77917893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2696;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0007;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 77917947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1179;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 77917949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77918089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1380;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 77918140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7907;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77918168 . GC G 6648 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0514;AVGPOST=0.9977;RSQ=0.9845;ERATE=0.0005;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 77918253 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1362;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 77918256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77918259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9519;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77918283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0096;AVGPOST=0.9977;RSQ=0.9162;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77918315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.7476;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77918380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77918407 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77918487 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77918509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0479;AVGPOST=0.9994;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77918519 . CA C 459 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0071;AVGPOST=0.9975;RSQ=0.8564;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77918568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77918629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0022;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77918752 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5779;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77918810 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7297;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77918840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7945;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77918879 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0057;AVGPOST=0.9980;RSQ=0.8422;ERATE=0.0008;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77918933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0107;AVGPOST=0.9983;RSQ=0.9364;ERATE=0.0005;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77919055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0093;AVGPOST=0.9970;RSQ=0.8775;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77919074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0458;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 77919119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6572;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0006;THETA=0.0007;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 77919145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9102;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77919266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0448;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 77919336 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77919341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77919420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7165;ERATE=0.0004;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77919579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.5868;ERATE=0.0008;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77919623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5355;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77919673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77919847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5229;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77919860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.740;LDAF=0.0044;AVGPOST=0.9974;RSQ=0.7867;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77919989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77920108 . G GGAT 292 PASS INDEL;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.6434;ERATE=0.0004;THETA=0.0034;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77920236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0355;AVGPOST=0.9977;RSQ=0.9751;ERATE=0.0006;THETA=0.0028;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 77920335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8934;ERATE=0.0004;THETA=0.0070;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77920437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9590;ERATE=0.0003;THETA=0.0028;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77920527 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6327;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77920587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.797;LDAF=0.9937;AVGPOST=0.9980;RSQ=0.8819;ERATE=0.0006;THETA=0.0057;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 77920604 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0004;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77920669 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77920803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4157;ERATE=0.0005;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77920839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.954;LDAF=0.0604;AVGPOST=0.9914;RSQ=0.9424;ERATE=0.0005;THETA=0.0091;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 77920844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0155;AVGPOST=0.9984;RSQ=0.9606;ERATE=0.0004;THETA=0.0031;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77920859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6112;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77920882 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8064;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77921002 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.683;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7981;ERATE=0.0005;THETA=0.0040;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77921349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6288;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77921368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6161;ERATE=0.0005;THETA=0.0080;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77921448 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0604;AVGPOST=0.9974;RSQ=0.9840;ERATE=0.0004;THETA=0.0009;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 77921562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77921570 rs59496054 G GT 25883 PASS INDEL;BAVGPOST=0.990;BRSQ=0.977;LDAF=0.2093;AVGPOST=0.9689;RSQ=0.9368;ERATE=0.0045;THETA=0.0008;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 77921636 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77921670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77921746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.809;LDAF=0.0132;AVGPOST=0.9948;RSQ=0.8497;ERATE=0.0006;THETA=0.0018;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77921756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.824;LDAF=0.0063;AVGPOST=0.9981;RSQ=0.8657;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77921928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8378;ERATE=0.0004;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77921939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9822;ERATE=0.0003;THETA=0.0038;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77921975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6819;ERATE=0.0004;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77922020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.5893;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77922028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0039;AVGPOST=0.9981;RSQ=0.7775;ERATE=0.0006;THETA=0.0044;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77922046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6780;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77922052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77922151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0120;AVGPOST=0.9990;RSQ=0.9608;ERATE=0.0004;THETA=0.0017;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77922195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.870;LDAF=0.0101;AVGPOST=0.9977;RSQ=0.9055;ERATE=0.0004;THETA=0.0023;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77922236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7134;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77922253 . TC T 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7494;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77922410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0100;AVGPOST=0.9983;RSQ=0.9250;ERATE=0.0006;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77922476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0143;AVGPOST=0.9984;RSQ=0.9522;ERATE=0.0004;THETA=0.0014;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77922521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7980;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77922552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0156;AVGPOST=0.9982;RSQ=0.9552;ERATE=0.0004;THETA=0.0016;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77922619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77922636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7159;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77922820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.732;LDAF=0.0075;AVGPOST=0.9969;RSQ=0.8414;ERATE=0.0004;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77922833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0984;AVGPOST=0.9939;RSQ=0.9734;ERATE=0.0007;THETA=0.0010;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 77923215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.7903;ERATE=0.0005;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77923248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.736;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8033;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77923346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9252;ERATE=0.0003;THETA=0.0021;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77923392 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0003;THETA=0.0024;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77923438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0294;AVGPOST=0.9964;RSQ=0.9514;ERATE=0.0006;THETA=0.0010;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 77923494 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.713;LDAF=0.0057;AVGPOST=0.9973;RSQ=0.8071;ERATE=0.0014;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77923520 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0614;AVGPOST=0.9982;RSQ=0.9859;ERATE=0.0005;THETA=0.0013;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 77923618 rs78827921 C CA 1103 PASS INDEL;BAVGPOST=0.479;BRSQ=0.109;LDAF=0.5889;AVGPOST=0.6309;RSQ=0.3276;ERATE=0.0137;THETA=0.0012;AC=1409;AN=2184 GT:DS:GL:BD 0.64514655 1
1 77923711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6736;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77923752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7092;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77923791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77923811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9486;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77923835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6280;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77923950 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.578;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5593;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77923969 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.491;LDAF=0.0126;AVGPOST=0.9807;RSQ=0.3898;ERATE=0.0032;THETA=0.0043;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77924023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.602;LDAF=0.0238;AVGPOST=0.9801;RSQ=0.6431;ERATE=0.0008;THETA=0.0012;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77924067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.493;LDAF=0.9887;AVGPOST=0.9873;RSQ=0.5770;ERATE=0.0020;THETA=0.0018;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 77924068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7501;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77924085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6322;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77924174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9256;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77924208 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77924217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.6946;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77924263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0275;AVGPOST=0.9986;RSQ=0.9785;ERATE=0.0005;THETA=0.0009;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77924390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9820;ERATE=0.0004;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77924429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0138;AVGPOST=0.9985;RSQ=0.9533;ERATE=0.0006;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77924459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.3294;AVGPOST=0.9872;RSQ=0.9811;ERATE=0.0005;THETA=0.0012;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 77924492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8588;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77924512 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0498;AVGPOST=0.9948;RSQ=0.9620;ERATE=0.0004;THETA=0.0013;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 77924536 . CA C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4820;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77924614 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77924641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77924847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.7931;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77924853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0042;AVGPOST=0.9981;RSQ=0.8055;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77924881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77924972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9795;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77925038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77925138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6079;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77925243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5694;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77925272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8258;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77925347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77925532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77925541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0636;AVGPOST=0.9987;RSQ=0.9925;ERATE=0.0004;THETA=0.0024;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 77925702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6796;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77925716 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77925805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77925867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9815;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77925885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0585;AVGPOST=0.9991;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 77925950 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9806;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77925993 . GA G 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4307;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77926006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77926021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77926074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5561;AVGPOST=0.9968;RSQ=0.9954;ERATE=0.0006;THETA=0.0004;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 77926561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0088;AVGPOST=0.9968;RSQ=0.8372;ERATE=0.0009;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77926743 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4792;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=1047;AN=2184 GT:DS:GL:BD 0.47939560 0
1 77926749 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4570;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77926938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0243;AVGPOST=0.9980;RSQ=0.9669;ERATE=0.0004;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 77926963 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77927000 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77927070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9713;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77927132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1809;AVGPOST=0.9969;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 77927287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1103;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0008;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77927307 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9760;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77927353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9633;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77927380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77927402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77927449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9413;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77927520 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5764;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77927566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1103;AVGPOST=0.9994;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 77927608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7255;ERATE=0.0010;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77927714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3408;AVGPOST=0.9906;RSQ=0.9857;ERATE=0.0029;THETA=0.0002;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 77927740 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8674;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77927793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77927820 . TA T 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5088;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77927877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6293;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77928159 . GA G 72 PASS INDEL;BAVGPOST=0.998;BRSQ=0.585;LDAF=0.0035;AVGPOST=0.9957;RSQ=0.4632;ERATE=0.0010;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77928261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77928264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8085;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77928462 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7560;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77928470 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7501;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77928504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9877;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77928587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3745;AVGPOST=0.9944;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 77928695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6917;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77928701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4070;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77928747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1753;AVGPOST=0.9974;RSQ=0.9929;ERATE=0.0007;THETA=0.0002;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 77928785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9394;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77928790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.629;LDAF=0.0112;AVGPOST=0.9879;RSQ=0.5590;ERATE=0.0041;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77928828 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77928913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4714;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77928923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6627;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77928992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77928993 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.614;LDAF=0.0130;AVGPOST=0.9842;RSQ=0.5088;ERATE=0.0024;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77929153 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77929306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9300;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77929343 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9992;RSQ=0.9718;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 77929413 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5746;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77929495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9987;RSQ=0.9290;ERATE=0.0004;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77929775 . CAT C 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77929845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77929855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0238;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0009;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 77930145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0137;AVGPOST=0.9995;RSQ=0.9839;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77930259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0239;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 77930263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6036;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77930276 . AAAAAGGTC A 721 PASS INDEL;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0059;AVGPOST=0.9954;RSQ=0.6822;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77930300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6670;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77930329 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77930417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8106;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77930449 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77930598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77930609 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7225;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77930868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77930914 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77931023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9243;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77931108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1760;AVGPOST=0.9941;RSQ=0.9854;ERATE=0.0004;THETA=0.0003;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 77931131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9702;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77931188 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6815;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77931190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7395;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77931196 . TA T 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3713;ERATE=0.0006;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77931231 . CCAAA C 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0035;AVGPOST=0.9964;RSQ=0.6070;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77931312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0115;AVGPOST=0.9987;RSQ=0.9582;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77931355 rs35106965 A AT 63907 PASS INDEL;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7848;AVGPOST=0.9935;RSQ=0.9864;ERATE=0.0005;THETA=0.0005;AC=1719;AN=2184 GT:DS:GL:BD 0.78708792 1
1 77931390 . A AT 1864 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0143;AVGPOST=0.9979;RSQ=0.9502;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77931415 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77931501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.7047;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77931551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7390;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77931623 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9598;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77931676 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77931726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7386;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77931775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77931828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77931936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9997;RSQ=0.9810;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77931997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9919;ERATE=0.0004;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77932015 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77932054 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7052;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77932294 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0681;AVGPOST=0.9982;RSQ=0.9888;ERATE=0.0004;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 77932326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8245;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77932396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0400;AVGPOST=0.9978;RSQ=0.9784;ERATE=0.0004;THETA=0.0009;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 77932402 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0136;AVGPOST=0.9994;RSQ=0.9806;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77932410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5693;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77932467 . AG A 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5333;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77932540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.926;LDAF=0.0836;AVGPOST=0.9819;RSQ=0.9285;ERATE=0.0006;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 77932606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5988;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77932725 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9771;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77932765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77932777 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6419;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77932813 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0245;AVGPOST=0.9989;RSQ=0.9788;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77933097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9369;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77933139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4604;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77933157 . ATC A 104 PASS INDEL;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6475;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77933159 . CTCTG C 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6230;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77933163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9188;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77933204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77933211 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77933223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.999;LDAF=0.7871;AVGPOST=0.9969;RSQ=0.9930;ERATE=0.0006;THETA=0.0007;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 77933408 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77933519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6198;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77933571 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6092;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77933576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8863;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77933704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77933727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77933733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8330;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77933819 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77933847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.9029;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77933850 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77933872 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8371;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77934220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8535;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77934344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5861;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77934409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77934439 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77934545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7229;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77934640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9725;ERATE=0.0003;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77934706 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6936;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77934763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5320;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77934969 . CA C 85 PASS INDEL;BAVGPOST=0.998;BRSQ=0.544;LDAF=0.0031;AVGPOST=0.9977;RSQ=0.6776;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77935069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77935074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0006;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77935075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6582;ERATE=0.0010;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77935208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0198;AVGPOST=0.9983;RSQ=0.9641;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 77935267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4856;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77935332 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7834;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77935409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4834;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77935423 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5170;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77935487 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8039;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77935547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1675;AVGPOST=0.9925;RSQ=0.9807;ERATE=0.0007;THETA=0.0005;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 77935555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1153;AVGPOST=0.9941;RSQ=0.9786;ERATE=0.0004;THETA=0.0014;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 77935890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.962;LDAF=0.1826;AVGPOST=0.9717;RSQ=0.9355;ERATE=0.0016;THETA=0.0006;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 77936028 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.935;LDAF=0.0293;AVGPOST=0.9928;RSQ=0.9025;ERATE=0.0007;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77936034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5819;ERATE=0.0004;THETA=0.0054;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77936071 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8717;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77936231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77936381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.6817;AVGPOST=0.9811;RSQ=0.9674;ERATE=0.0046;THETA=0.0007;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 77936382 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8313;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0005;THETA=0.0007;AC=1816;AN=2184 GT:DS:GL:BD 0.83150184 1
1 77936421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2812;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77936433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5121;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77936534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.740;LDAF=0.0098;AVGPOST=0.9937;RSQ=0.7429;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77936574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8295;AVGPOST=0.9941;RSQ=0.9831;ERATE=0.0011;THETA=0.0006;AC=1816;AN=2184 GT:DS:GL:BD 0.83150184 1
1 77936577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.8468;AVGPOST=0.9918;RSQ=0.9741;ERATE=0.0018;THETA=0.0002;AC=1856;AN=2184 GT:DS:GL:BD 0.84981686 1
1 77936620 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77936678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8812;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77936687 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.7046;AVGPOST=0.9940;RSQ=0.9886;ERATE=0.0004;THETA=0.0003;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 77936688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4831;AVGPOST=0.9899;RSQ=0.9866;ERATE=0.0005;THETA=0.0007;AC=1053;AN=2184 GT:DS:GL:BD 0.48214287 0
1 77936750 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7318;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77936778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0104;AVGPOST=0.9993;RSQ=0.9761;ERATE=0.0004;THETA=0.0016;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77936838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1024;AVGPOST=0.9980;RSQ=0.9909;ERATE=0.0004;THETA=0.0024;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 77936846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77936956 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0220;AVGPOST=0.9994;RSQ=0.9888;ERATE=0.0003;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77936960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0003;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77936984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9310;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77937004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.8508;AVGPOST=0.9943;RSQ=0.9829;ERATE=0.0003;THETA=0.0091;AC=1859;AN=2184 GT:DS:GL:BD 0.85119045 1
1 77937126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0044;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77937149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8262;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77937151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5961;ERATE=0.0004;THETA=0.0100;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77937178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9191;ERATE=0.0003;THETA=0.0077;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77937367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0110;AVGPOST=0.9987;RSQ=0.9516;ERATE=0.0003;THETA=0.0095;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77937392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.730;LDAF=0.0078;AVGPOST=0.9941;RSQ=0.7195;ERATE=0.0007;THETA=0.0115;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77937457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.719;LDAF=0.0054;AVGPOST=0.9955;RSQ=0.6721;ERATE=0.0006;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77937520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.896;LDAF=0.6524;AVGPOST=0.9362;RSQ=0.8934;ERATE=0.0099;THETA=0.0227;AC=1442;AN=2184 GT:DS:GL:BD 0.66025639 1
1 77937528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0156;AVGPOST=0.9955;RSQ=0.8777;ERATE=0.0004;THETA=0.0110;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77937651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9390;ERATE=0.0004;THETA=0.0079;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77937654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77937715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0052;AVGPOST=0.9993;RSQ=0.9420;ERATE=0.0004;THETA=0.0192;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77937718 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.4087;ERATE=0.0003;THETA=0.0093;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77937808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.783;LDAF=0.0065;AVGPOST=0.9968;RSQ=0.8066;ERATE=0.0003;THETA=0.0026;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77937931 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.922;LDAF=0.0910;AVGPOST=0.9820;RSQ=0.9187;ERATE=0.0021;THETA=0.0169;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 77937992 . C CA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.4256;ERATE=0.0005;THETA=0.0270;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77938003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7340;ERATE=0.0003;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77938110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.955;LDAF=0.8408;AVGPOST=0.9845;RSQ=0.9581;ERATE=0.0004;THETA=0.0071;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 77938169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8568;ERATE=0.0003;THETA=0.0104;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77938277 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9720;ERATE=0.0004;THETA=0.0040;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77938320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0110;AVGPOST=0.9971;RSQ=0.9022;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77938436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0173;AVGPOST=0.9986;RSQ=0.9670;ERATE=0.0003;THETA=0.0054;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77938445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8697;ERATE=0.0004;THETA=0.0032;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77938547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77938578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8996;ERATE=0.0003;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77938613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7388;ERATE=0.0009;THETA=0.0044;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77938680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8764;ERATE=0.0004;THETA=0.0039;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77938740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.685;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.7122;ERATE=0.0005;THETA=0.0078;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77938743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0240;AVGPOST=0.9961;RSQ=0.9392;ERATE=0.0005;THETA=0.0049;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77938755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0191;AVGPOST=0.9966;RSQ=0.9249;ERATE=0.0004;THETA=0.0025;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77938829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6593;ERATE=0.0005;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77938880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0177;AVGPOST=0.9994;RSQ=0.9842;ERATE=0.0003;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77938941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.3968;AVGPOST=0.9849;RSQ=0.9747;ERATE=0.0013;THETA=0.0033;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 77938971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8441;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77939002 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7880;ERATE=0.0003;THETA=0.0067;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77939003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77939084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77939112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7764;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77939223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8835;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77939240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8625;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77939246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3995;AVGPOST=0.9953;RSQ=0.9921;ERATE=0.0005;THETA=0.0007;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 77939301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8871;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77939565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0169;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77939592 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77939594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77939596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77939662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8932;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77939727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3992;AVGPOST=0.9962;RSQ=0.9934;ERATE=0.0005;THETA=0.0012;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 77939766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77939807 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0541;AVGPOST=0.9991;RSQ=0.9931;ERATE=0.0003;THETA=0.0002;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 77939834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77939918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.8265;AVGPOST=0.9982;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=1806;AN=2184 GT:DS:GL:BD 0.82692307 1
1 77940063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3788;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0005;THETA=0.0011;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 77940116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77940204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9682;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77940205 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9549;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77940225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9979;RSQ=0.2559;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77940245 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5229;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77940254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0078;AVGPOST=0.9968;RSQ=0.8459;ERATE=0.0005;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77940545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0034;AVGPOST=0.9974;RSQ=0.6997;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77940567 . G GT 61 PASS INDEL;BAVGPOST=0.972;BRSQ=0.410;LDAF=0.0482;AVGPOST=0.9312;RSQ=0.4090;ERATE=0.0103;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 77940676 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.971;LDAF=0.2789;AVGPOST=0.9896;RSQ=0.9806;ERATE=0.0006;THETA=0.0004;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 77940682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0104;AVGPOST=0.9977;RSQ=0.9124;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77940723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0377;AVGPOST=0.9947;RSQ=0.9498;ERATE=0.0005;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 77940867 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0362;AVGPOST=0.9984;RSQ=0.9834;ERATE=0.0004;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 77941041 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0106;AVGPOST=0.9990;RSQ=0.9676;ERATE=0.0005;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77941043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8565;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77941132 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77941196 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77941276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6042;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77941437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0159;AVGPOST=0.9946;RSQ=0.8735;ERATE=0.0009;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77941517 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.520;LDAF=0.0149;AVGPOST=0.9861;RSQ=0.6206;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77941518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.650;LDAF=0.0080;AVGPOST=0.9977;RSQ=0.8701;ERATE=0.0005;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77941528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0119;AVGPOST=0.9965;RSQ=0.8796;ERATE=0.0007;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77941555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0042;AVGPOST=0.9956;RSQ=0.6045;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77941559 . A AT 347 PASS INDEL;BAVGPOST=0.990;BRSQ=0.559;LDAF=0.0161;AVGPOST=0.9789;RSQ=0.4534;ERATE=0.0033;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77941576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2813;AVGPOST=0.9941;RSQ=0.9879;ERATE=0.0006;THETA=0.0008;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 77941663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6296;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77941689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4928;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77941705 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6169;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77941736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77941798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77942058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.5799;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77942061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.731;LDAF=0.0051;AVGPOST=0.9950;RSQ=0.6113;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77942108 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0135;AVGPOST=0.9989;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77942177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0997;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 77942335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9657;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77942346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77942390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9686;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77942403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77942619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77942629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0121;AVGPOST=0.9987;RSQ=0.9548;ERATE=0.0004;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77942634 . T TA 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77942694 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77942714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77942791 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77942792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77942812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8106;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77942824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9712;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77942895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9106;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77942964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9856;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77942966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0909;AVGPOST=0.9989;RSQ=0.9945;ERATE=0.0003;THETA=0.0017;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 77943126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5598;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77943155 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77943336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.7556;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77943338 . CATT C 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77943375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9821;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77943449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77943538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9996;RSQ=0.9652;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77943687 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77943736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.8062;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77943773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77943845 . AC A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5127;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77944054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77944076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9065;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77944110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9594;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77944121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77944130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1067;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 77944246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9996;RSQ=0.9666;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77944250 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5427;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77944394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6209;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77944483 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.771;LDAF=0.0128;AVGPOST=0.9936;RSQ=0.7907;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77944488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9386;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77944547 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6599;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77944739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77944755 . CTG C 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.5568;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77944791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77944808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0088;AVGPOST=0.9979;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77944928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77944945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0272;AVGPOST=0.9980;RSQ=0.9720;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77945243 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77945288 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8361;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77945352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9992;RSQ=0.9468;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77945526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.964;LDAF=0.0910;AVGPOST=0.9948;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 77945651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.964;LDAF=0.0910;AVGPOST=0.9951;RSQ=0.9811;ERATE=0.0003;THETA=0.0006;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 77945652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9389;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77945686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5758;AVGPOST=0.9979;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 77945720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0988;AVGPOST=0.9987;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 77945763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0453;AVGPOST=0.9994;RSQ=0.9938;ERATE=0.0004;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 77945811 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77945815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.844;LDAF=0.0102;AVGPOST=0.9954;RSQ=0.8302;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77945818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0064;AVGPOST=0.9968;RSQ=0.8103;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77945819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0443;AVGPOST=0.9989;RSQ=0.9892;ERATE=0.0004;THETA=0.0010;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 77945840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8699;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77946077 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77946086 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0456;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 77946131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0540;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 77946145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77946154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77946291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9994;RSQ=0.9565;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77946315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77946478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8883;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77946552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0981;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 77946553 . GGCCCAC G 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77946553 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1432;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 77946584 rs57118742 TGCC T 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7771;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77946684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77946744 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0034;AVGPOST=0.9952;RSQ=0.4733;ERATE=0.0023;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77946781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77946798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4239;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77946806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9989;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 77946871 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8463;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77946885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.977;LDAF=0.4796;AVGPOST=0.9819;RSQ=0.9751;ERATE=0.0047;THETA=0.0005;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 77946911 rs111777444 G GTGCGA 7189 PASS INDEL;BAVGPOST=0.973;BRSQ=0.779;LDAF=0.0716;AVGPOST=0.9751;RSQ=0.8739;ERATE=0.0042;THETA=0.0028;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 77946951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.940;LDAF=0.1344;AVGPOST=0.9883;RSQ=0.9627;ERATE=0.0007;THETA=0.0005;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 77947077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0801;AVGPOST=0.9937;RSQ=0.9736;ERATE=0.0007;THETA=0.0006;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 77947177 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0770;AVGPOST=0.9987;RSQ=0.9928;ERATE=0.0005;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 77947187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0770;AVGPOST=0.9991;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 77947194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4984;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 77947240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0043;AVGPOST=0.9980;RSQ=0.8103;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77947257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4919;AVGPOST=0.9974;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 77947384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2892;AVGPOST=0.9941;RSQ=0.9897;ERATE=0.0005;THETA=0.0005;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 77947479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8028;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77947504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6511;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77947527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.853;LDAF=0.0056;AVGPOST=0.9986;RSQ=0.8918;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77947610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1822;AVGPOST=0.9960;RSQ=0.9908;ERATE=0.0005;THETA=0.0005;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 77947694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7839;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77947695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9545;ERATE=0.0004;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77947721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0375;AVGPOST=0.9982;RSQ=0.9821;ERATE=0.0004;THETA=0.0007;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 77947742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77947772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77947921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7049;ERATE=0.0008;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77947996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0095;AVGPOST=0.9963;RSQ=0.8295;ERATE=0.0004;THETA=0.0025;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77948141 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3233;AVGPOST=0.9952;RSQ=0.9927;ERATE=0.0005;THETA=0.0062;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 77948243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0118;AVGPOST=0.9969;RSQ=0.8974;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77948272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8082;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77948468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0618;AVGPOST=0.9994;RSQ=0.9950;ERATE=0.0003;THETA=0.0011;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 77948519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0077;AVGPOST=0.9999;RSQ=0.9917;ERATE=0.0009;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77948522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77948559 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1824;AVGPOST=0.9977;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 77948593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8340;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77948624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4900;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77948837 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5481;ERATE=0.0004;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77948861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1463;AVGPOST=0.9964;RSQ=0.9892;ERATE=0.0006;THETA=0.0006;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 77948984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77949072 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.5446;AVGPOST=0.9954;RSQ=0.9951;ERATE=0.0007;THETA=0.0015;AC=1190;AN=2184 GT:DS:GL:BD 0.54487181 1
1 77949092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77949115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77949122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1616;AVGPOST=0.9942;RSQ=0.9855;ERATE=0.0005;THETA=0.0006;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 77949181 . AG A 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.6235;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77949239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0004;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77949312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9799;ERATE=0.0003;THETA=0.0019;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77949421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0176;AVGPOST=0.9982;RSQ=0.9595;ERATE=0.0003;THETA=0.0011;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77949510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8393;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77949535 rs34634157 A AC 8211 PASS INDEL;BAVGPOST=0.985;BRSQ=0.956;LDAF=0.1510;AVGPOST=0.9842;RSQ=0.9606;ERATE=0.0007;THETA=0.0012;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 77949542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.961;LDAF=0.1499;AVGPOST=0.9859;RSQ=0.9658;ERATE=0.0003;THETA=0.0004;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 77949544 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.961;LDAF=0.1500;AVGPOST=0.9861;RSQ=0.9659;ERATE=0.0003;THETA=0.0005;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 77949545 . T TAC 2037 PASS INDEL;BAVGPOST=0.986;BRSQ=0.757;LDAF=0.0319;AVGPOST=0.9787;RSQ=0.7653;ERATE=0.0005;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77949566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.970;LDAF=0.1741;AVGPOST=0.9839;RSQ=0.9621;ERATE=0.0038;THETA=0.0026;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 77949573 . G GCA 1974 PASS INDEL;BAVGPOST=0.987;BRSQ=0.773;LDAF=0.0300;AVGPOST=0.9827;RSQ=0.7929;ERATE=0.0008;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 77949573 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0055;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77949641 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77949658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77949696 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9996;RSQ=0.9908;ERATE=0.0003;THETA=0.0047;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77949761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0067;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77949834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8449;ERATE=0.0004;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77949850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0081;AVGPOST=0.9991;RSQ=0.9518;ERATE=0.0004;THETA=0.0029;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77949864 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0162;AVGPOST=0.9986;RSQ=0.9683;ERATE=0.0004;THETA=0.0065;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77950083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950141 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77950199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77950202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9177;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77950227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3159;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0007;THETA=0.0003;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 77950238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8041;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77950261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0004;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77950380 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77950416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77950426 . AC A 220 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.9031;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77950486 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1534;AVGPOST=0.9966;RSQ=0.9903;ERATE=0.0005;THETA=0.0004;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 77950502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77950583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5479;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=1199;AN=2184 GT:DS:GL:BD 0.54899269 1
1 77950601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7247;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77950602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.512;LDAF=0.0033;AVGPOST=0.9957;RSQ=0.5015;ERATE=0.0013;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77950619 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0489;AVGPOST=0.9989;RSQ=0.9898;ERATE=0.0004;THETA=0.0013;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 77950658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4056;AVGPOST=0.9959;RSQ=0.9935;ERATE=0.0007;THETA=0.0008;AC=887;AN=2184 GT:DS:GL:BD 0.40613553 0
1 77950761 . TC T 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950844 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4051;AVGPOST=0.9952;RSQ=0.9927;ERATE=0.0011;THETA=0.0006;AC=886;AN=2184 GT:DS:GL:BD 0.40567765 0
1 77950845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4553;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.794;LDAF=0.0329;AVGPOST=0.9867;RSQ=0.8418;ERATE=0.0004;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 77950932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77950994 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5209;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77951062 . A AGC 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7013;ERATE=0.0004;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77951133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77951148 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77951199 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.875;LDAF=0.0160;AVGPOST=0.9957;RSQ=0.8892;ERATE=0.0004;THETA=0.0023;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77951216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9668;ERATE=0.0004;THETA=0.0048;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77951392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0618;AVGPOST=0.9976;RSQ=0.9871;ERATE=0.0004;THETA=0.0088;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 77951598 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8686;ERATE=0.0011;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77951690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.8035;AVGPOST=0.9908;RSQ=0.9787;ERATE=0.0005;THETA=0.0069;AC=1752;AN=2184 GT:DS:GL:BD 0.80219781 1
1 77951832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.546;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5426;ERATE=0.0006;THETA=0.0121;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77951900 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7828;ERATE=0.0011;THETA=0.0162;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77951914 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6144;ERATE=0.0006;THETA=0.0155;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77951940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4912;ERATE=0.0004;THETA=0.0175;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77952045 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.8950;ERATE=0.0006;THETA=0.0035;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77952123 . A AT 779 PASS INDEL;BAVGPOST=0.986;BRSQ=0.634;LDAF=0.0271;AVGPOST=0.9717;RSQ=0.5724;ERATE=0.0059;THETA=0.0139;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77952583 . C CT 7 PASS INDEL;BAVGPOST=0.995;BRSQ=0.484;LDAF=0.0082;AVGPOST=0.9888;RSQ=0.4556;ERATE=0.0017;THETA=0.0338;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77952593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0040;AVGPOST=0.9947;RSQ=0.4637;ERATE=0.0017;THETA=0.0098;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77952614 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.456;LDAF=0.0053;AVGPOST=0.9926;RSQ=0.4602;ERATE=0.0008;THETA=0.0232;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77952615 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.805;LDAF=0.0173;AVGPOST=0.9891;RSQ=0.7447;ERATE=0.0011;THETA=0.0136;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77952644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.663;LDAF=0.1370;AVGPOST=0.8975;RSQ=0.6689;ERATE=0.0022;THETA=0.0128;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 77952708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.595;LDAF=0.0080;AVGPOST=0.9921;RSQ=0.6101;ERATE=0.0008;THETA=0.0177;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77952732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.829;BRSQ=0.638;LDAF=0.2751;AVGPOST=0.8270;RSQ=0.6613;ERATE=0.0156;THETA=0.0044;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 77952733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.289;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.2985;ERATE=0.0008;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77952740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.638;LDAF=0.0112;AVGPOST=0.9917;RSQ=0.7128;ERATE=0.0005;THETA=0.0066;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77952741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.618;LDAF=0.0065;AVGPOST=0.9932;RSQ=0.6057;ERATE=0.0006;THETA=0.0218;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77952745 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.791;LDAF=0.0288;AVGPOST=0.9842;RSQ=0.7839;ERATE=0.0006;THETA=0.0091;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77952760 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.889;BRSQ=0.743;LDAF=0.2284;AVGPOST=0.8919;RSQ=0.7736;ERATE=0.0018;THETA=0.0164;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 77952761 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.586;LDAF=0.0130;AVGPOST=0.9931;RSQ=0.8016;ERATE=0.0006;THETA=0.0206;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77952762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.685;LDAF=0.0195;AVGPOST=0.9837;RSQ=0.6523;ERATE=0.0013;THETA=0.0068;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77952781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.741;BRSQ=0.581;LDAF=0.5669;AVGPOST=0.7761;RSQ=0.6559;ERATE=0.0310;THETA=0.0066;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 77952782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0064;AVGPOST=0.9934;RSQ=0.5858;ERATE=0.0009;THETA=0.0163;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77952797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.689;LDAF=0.0092;AVGPOST=0.9926;RSQ=0.6608;ERATE=0.0008;THETA=0.0093;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77952811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.575;LDAF=0.0061;AVGPOST=0.9943;RSQ=0.6149;ERATE=0.0018;THETA=0.0048;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77952823 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.860;LDAF=0.0105;AVGPOST=0.9957;RSQ=0.8245;ERATE=0.0007;THETA=0.0109;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77952851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.776;LDAF=0.0100;AVGPOST=0.9961;RSQ=0.8402;ERATE=0.0013;THETA=0.0130;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77952880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.858;LDAF=0.0196;AVGPOST=0.9931;RSQ=0.8636;ERATE=0.0004;THETA=0.0137;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77952881 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6447;ERATE=0.0004;THETA=0.0147;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77952893 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0004;THETA=0.0099;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77953057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.798;LDAF=0.0066;AVGPOST=0.9964;RSQ=0.7620;ERATE=0.0010;THETA=0.0176;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77953106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0063;AVGPOST=0.9981;RSQ=0.8801;ERATE=0.0004;THETA=0.0082;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77953396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0095;AVGPOST=0.9967;RSQ=0.8589;ERATE=0.0005;THETA=0.0077;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77953438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4853;ERATE=0.0004;THETA=0.0160;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77953590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0293;AVGPOST=0.9851;RSQ=0.8168;ERATE=0.0006;THETA=0.0118;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 77953812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.619;LDAF=0.0050;AVGPOST=0.9957;RSQ=0.6390;ERATE=0.0008;THETA=0.0068;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77953813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.955;LDAF=0.1175;AVGPOST=0.9675;RSQ=0.9012;ERATE=0.0007;THETA=0.0083;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 77953834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.844;LDAF=0.0200;AVGPOST=0.9908;RSQ=0.8263;ERATE=0.0007;THETA=0.0067;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77953844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0015;AVGPOST=0.9975;RSQ=0.3196;ERATE=0.0007;THETA=0.0106;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77953845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.956;LDAF=0.1283;AVGPOST=0.9827;RSQ=0.9511;ERATE=0.0006;THETA=0.0015;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 77953895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.973;LDAF=0.0848;AVGPOST=0.9871;RSQ=0.9430;ERATE=0.0005;THETA=0.0028;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 77953905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.684;LDAF=0.0204;AVGPOST=0.9860;RSQ=0.7217;ERATE=0.0012;THETA=0.0017;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 77953913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.781;LDAF=0.0223;AVGPOST=0.9885;RSQ=0.7815;ERATE=0.0039;THETA=0.0119;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77953948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0032;AVGPOST=0.9960;RSQ=0.4623;ERATE=0.0007;THETA=0.0093;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77953985 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0323;AVGPOST=0.9953;RSQ=0.9447;ERATE=0.0006;THETA=0.0011;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77953988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5299;ERATE=0.0004;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77953990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6085;ERATE=0.0008;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77954025 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0005;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77954104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77954130 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5669;ERATE=0.0004;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77954155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0052;AVGPOST=0.9973;RSQ=0.7979;ERATE=0.0005;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77954200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0286;AVGPOST=0.9994;RSQ=0.9901;ERATE=0.0005;THETA=0.0034;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77954268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77954282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77954322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1348;AVGPOST=0.9972;RSQ=0.9916;ERATE=0.0006;THETA=0.0012;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 77954612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6782;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77954733 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9261;ERATE=0.0004;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77954850 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77954895 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0287;AVGPOST=0.9993;RSQ=0.9906;ERATE=0.0003;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77954948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9628;ERATE=0.0004;THETA=0.0034;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77955039 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0015;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 77955084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0005;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77955107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0339;AVGPOST=0.9960;RSQ=0.9548;ERATE=0.0011;THETA=0.0017;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77955180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.303;LDAF=0.0296;AVGPOST=0.9598;RSQ=0.4786;ERATE=0.0015;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77955397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6043;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77955487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7816;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77955591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7435;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77955706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0458;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 77955881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.927;LDAF=0.9131;AVGPOST=0.9901;RSQ=0.9536;ERATE=0.0005;THETA=0.0003;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 77955937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0075;AVGPOST=0.9990;RSQ=0.9437;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77956043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9183;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77956059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6530;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77956068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77956372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9993;RSQ=0.9858;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77956582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1321;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 77956606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9990;RSQ=0.9580;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77956694 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1272;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 77956812 . G GAAGA 5951 PASS INDEL;BAVGPOST=0.992;BRSQ=0.949;LDAF=0.0929;AVGPOST=0.9937;RSQ=0.9716;ERATE=0.0003;THETA=0.0005;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 77956845 . A AAAGT 17272 PASS INDEL;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0940;AVGPOST=0.9955;RSQ=0.9815;ERATE=0.0004;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 77956853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1322;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 77956887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8716;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77957021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1267;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0009;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 77957027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6236;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77957028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4892;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77957050 . T TC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.5855;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77957088 . G GC 782 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9993;RSQ=0.9746;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77957148 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6016;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77957240 . TGTG T 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6869;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77957242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8497;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77957281 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6935;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=1515;AN=2184 GT:DS:GL:BD 0.69368130 1
1 77957357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8416;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0003;THETA=0.0002;AC=1840;AN=2184 GT:DS:GL:BD 0.84249085 1
1 77957401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77957419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1270;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0011;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 77957466 . G GA 98 PASS INDEL;BAVGPOST=0.970;BRSQ=0.506;LDAF=0.0425;AVGPOST=0.9625;RSQ=0.6619;ERATE=0.0026;THETA=0.0010;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 77957521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9111;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77957544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77957613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77957653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1318;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 77957685 . AT A 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4304;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77957697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1202;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 77957702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77957801 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4046;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0009;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 77957885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8488;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=1855;AN=2184 GT:DS:GL:BD 0.84935898 1
1 77957912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5654;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77958068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4160;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77958084 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7839;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77958120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77958134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1325;AVGPOST=0.9983;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 77958140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77958274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9210;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77958309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9436;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77958346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9701;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77958356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0056;AVGPOST=0.9975;RSQ=0.8213;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77958444 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1449;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 77958473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4989;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77958483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77958578 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77958584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9475;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77958622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5260;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77958696 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9987;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77958798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77958810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9873;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77958811 . CA C 6874 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 77958847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7568;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77958955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77958973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1204;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 77959016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1317;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 77959025 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9996;RSQ=0.9856;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77959068 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0103;AVGPOST=0.9984;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77959118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6451;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77959182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77959211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77959236 rs34985580 GCATT G 12026 PASS INDEL;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1176;AVGPOST=0.9963;RSQ=0.9858;ERATE=0.0018;THETA=0.0005;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 77959399 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0031;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77959431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7981;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77959695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77959868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5729;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77959893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7386;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77960151 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8140;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77960155 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9562;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77960276 rs74526325 G GA 71667 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8479;AVGPOST=0.9958;RSQ=0.9882;ERATE=0.0005;THETA=0.0004;AC=1854;AN=2184 GT:DS:GL:BD 0.84890109 1
1 77960318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77960337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4567;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77960434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0222;AVGPOST=0.9991;RSQ=0.9857;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 77960446 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0106;AVGPOST=0.9991;RSQ=0.9661;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77960462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77960464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1147;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0027;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 77960485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77960549 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1115;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0003;THETA=0.0007;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 77960583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7056;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77960597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4882;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77960677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0136;AVGPOST=0.9994;RSQ=0.9786;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77960762 . GTC G 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8290;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77960762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4899;ERATE=0.0006;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77960807 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0175;AVGPOST=0.9987;RSQ=0.9672;ERATE=0.0004;THETA=0.0016;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77960856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0162;AVGPOST=0.9904;RSQ=0.7524;ERATE=0.0010;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77960915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0141;AVGPOST=0.9989;RSQ=0.9639;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77961085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0701;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0019;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 77961202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8436;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77961242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77961243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77961252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0005;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77961327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0021;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77961333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2027;AVGPOST=0.9947;RSQ=0.9878;ERATE=0.0007;THETA=0.0004;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 77961499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4506;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77961543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1575;AVGPOST=0.9957;RSQ=0.9882;ERATE=0.0005;THETA=0.0008;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 77961702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4361;AVGPOST=0.9939;RSQ=0.9912;ERATE=0.0006;THETA=0.0008;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 77961752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1111;AVGPOST=0.9976;RSQ=0.9913;ERATE=0.0003;THETA=0.0012;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 77961855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0209;AVGPOST=0.9987;RSQ=0.9738;ERATE=0.0003;THETA=0.0011;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77961866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0172;AVGPOST=0.9974;RSQ=0.9451;ERATE=0.0005;THETA=0.0025;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77961916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.962;LDAF=0.2050;AVGPOST=0.9946;RSQ=0.9871;ERATE=0.0005;THETA=0.0004;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 77961952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.614;LDAF=0.0140;AVGPOST=0.9869;RSQ=0.6256;ERATE=0.0007;THETA=0.0019;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77961958 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.767;LDAF=0.0062;AVGPOST=0.9964;RSQ=0.7855;ERATE=0.0011;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77961998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0807;AVGPOST=0.9965;RSQ=0.9843;ERATE=0.0004;THETA=0.0007;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 77962076 . CTTTG C 1268 PASS INDEL;BAVGPOST=0.994;BRSQ=0.762;LDAF=0.0122;AVGPOST=0.9953;RSQ=0.8405;ERATE=0.0004;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77962106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77962210 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9266;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77962231 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6600;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77962251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0081;AVGPOST=0.9991;RSQ=0.9523;ERATE=0.0005;THETA=0.0025;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77962277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77962289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4574;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77962348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77962355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5400;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77962356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.7920;AVGPOST=0.9896;RSQ=0.9767;ERATE=0.0004;THETA=0.0006;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 77962468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77962525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.934;LDAF=0.0686;AVGPOST=0.9925;RSQ=0.9609;ERATE=0.0005;THETA=0.0023;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 77962526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77962649 . TA T 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8470;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77962685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.966;LDAF=0.0943;AVGPOST=0.9933;RSQ=0.9697;ERATE=0.0005;THETA=0.0015;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 77962694 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.0977;AVGPOST=0.9941;RSQ=0.9746;ERATE=0.0003;THETA=0.0045;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 77962705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.3748;AVGPOST=0.9814;RSQ=0.9726;ERATE=0.0004;THETA=0.0332;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 77962717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0114;AVGPOST=0.9975;RSQ=0.9178;ERATE=0.0003;THETA=0.0165;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77962753 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8287;ERATE=0.0006;THETA=0.0268;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77962781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8618;ERATE=0.0004;THETA=0.0206;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77962824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0139;AVGPOST=0.9975;RSQ=0.9409;ERATE=0.0003;THETA=0.0200;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77962924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.958;LDAF=0.0714;AVGPOST=0.9887;RSQ=0.9345;ERATE=0.0009;THETA=0.0416;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 77963015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7080;ERATE=0.0013;THETA=0.0462;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77963059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0234;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77963081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.954;LDAF=0.0353;AVGPOST=0.9962;RSQ=0.9584;ERATE=0.0005;THETA=0.0594;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 77963091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0356;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77963285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0615;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77963381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.683;LDAF=0.1444;AVGPOST=0.9084;RSQ=0.6974;ERATE=0.0185;THETA=0.0524;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 77963497 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.847;LDAF=0.0234;AVGPOST=0.9905;RSQ=0.8393;ERATE=0.0044;THETA=0.0227;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77963583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7573;ERATE=0.0004;THETA=0.0281;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77963626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8106;ERATE=0.0005;THETA=0.0235;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77963695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5975;ERATE=0.0003;THETA=0.0521;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77963717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0228;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77963726 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.919;LDAF=0.0934;AVGPOST=0.9781;RSQ=0.9293;ERATE=0.0014;THETA=0.0347;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 77963730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0003;THETA=0.0377;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77963775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.903;BRSQ=0.837;LDAF=0.4428;AVGPOST=0.9078;RSQ=0.8686;ERATE=0.0441;THETA=0.0218;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 77963782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0073;AVGPOST=0.9961;RSQ=0.8072;ERATE=0.0006;THETA=0.0298;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77963833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.795;LDAF=0.0129;AVGPOST=0.9934;RSQ=0.7858;ERATE=0.0009;THETA=0.0477;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77963852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0053;AVGPOST=0.9970;RSQ=0.7608;ERATE=0.0012;THETA=0.0410;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77963865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.5086;ERATE=0.0007;THETA=0.0296;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77963889 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.785;LDAF=0.0858;AVGPOST=0.9608;RSQ=0.8133;ERATE=0.0092;THETA=0.0209;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 77963917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.891;LDAF=0.0195;AVGPOST=0.9940;RSQ=0.8720;ERATE=0.0006;THETA=0.0180;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77964061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4597;ERATE=0.0004;THETA=0.0132;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964062 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.882;LDAF=0.2737;AVGPOST=0.9434;RSQ=0.9010;ERATE=0.0090;THETA=0.0061;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 77964122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0200;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0178;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8075;ERATE=0.0008;THETA=0.0388;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77964273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.907;LDAF=0.1132;AVGPOST=0.9782;RSQ=0.9154;ERATE=0.0043;THETA=0.0165;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 77964277 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0184;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6571;ERATE=0.0005;THETA=0.0126;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77964344 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0108;AVGPOST=0.9973;RSQ=0.9142;ERATE=0.0013;THETA=0.0145;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77964392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0003;THETA=0.0296;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77964396 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0005;THETA=0.0094;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77964431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9194;ERATE=0.0003;THETA=0.0180;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77964477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964480 . C CAA 449 PASS INDEL;BAVGPOST=0.997;BRSQ=0.739;LDAF=0.0064;AVGPOST=0.9951;RSQ=0.6631;ERATE=0.0006;THETA=0.0099;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77964564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0005;THETA=0.0259;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.909;LDAF=0.4472;AVGPOST=0.9390;RSQ=0.9227;ERATE=0.0019;THETA=0.0068;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 77964624 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7930;ERATE=0.0005;THETA=0.0034;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77964694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7236;ERATE=0.0003;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77964737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964753 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.973;LDAF=0.4121;AVGPOST=0.9680;RSQ=0.9616;ERATE=0.0009;THETA=0.0012;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 77964863 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0085;AVGPOST=0.9975;RSQ=0.8713;ERATE=0.0009;THETA=0.0042;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77964885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77964900 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9384;ERATE=0.0003;THETA=0.0028;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77964953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0079;AVGPOST=0.9984;RSQ=0.9043;ERATE=0.0004;THETA=0.0024;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77964965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0079;AVGPOST=0.9983;RSQ=0.8969;ERATE=0.0006;THETA=0.0026;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77964997 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.272;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.3194;ERATE=0.0007;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77965067 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0077;AVGPOST=0.9988;RSQ=0.9279;ERATE=0.0004;THETA=0.0056;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77965074 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0019;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77965096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0074;AVGPOST=0.9975;RSQ=0.8904;ERATE=0.0004;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77965122 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9541;ERATE=0.0005;THETA=0.0026;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77965124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77965152 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7305;ERATE=0.0005;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77965156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.974;LDAF=0.3811;AVGPOST=0.9723;RSQ=0.9652;ERATE=0.0005;THETA=0.0016;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 77965227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.975;LDAF=0.4221;AVGPOST=0.9676;RSQ=0.9604;ERATE=0.0005;THETA=0.0014;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 77965233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7316;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77965265 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7290;ERATE=0.0006;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77965329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6297;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77965356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9679;ERATE=0.0004;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77965360 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9541;ERATE=0.0005;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77965384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9678;ERATE=0.0004;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77965389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8601;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77965567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9975;RSQ=0.9056;ERATE=0.0004;THETA=0.0001;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77965608 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8248;ERATE=0.0005;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77965637 . A AT 7737 PASS INDEL;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0472;AVGPOST=0.9966;RSQ=0.9774;ERATE=0.0005;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77965694 . CTA C 167 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5544;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77965701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0144;AVGPOST=0.9971;RSQ=0.9125;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 77965703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.1842;AVGPOST=0.9973;RSQ=0.9931;ERATE=0.0005;THETA=0.0004;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 77965753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7632;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77965841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4261;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77965923 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77966011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.965;LDAF=0.4465;AVGPOST=0.9915;RSQ=0.9888;ERATE=0.0007;THETA=0.0006;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 77966035 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4532;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77966036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.951;LDAF=0.1689;AVGPOST=0.9828;RSQ=0.9613;ERATE=0.0006;THETA=0.0006;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 77966101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.946;LDAF=0.1731;AVGPOST=0.9736;RSQ=0.9406;ERATE=0.0013;THETA=0.0003;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 77966103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.951;LDAF=0.1682;AVGPOST=0.9823;RSQ=0.9589;ERATE=0.0007;THETA=0.0005;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 77966117 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0039;AVGPOST=0.9979;RSQ=0.7658;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77966121 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6111;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77966282 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7376;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77966307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9124;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77966318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.4492;AVGPOST=0.9953;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 77966415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1847;AVGPOST=0.9975;RSQ=0.9941;ERATE=0.0004;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 77966450 . TG T 564 PASS INDEL;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77966460 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0064;AVGPOST=0.9978;RSQ=0.8625;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77966543 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77966600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.939;LDAF=0.1822;AVGPOST=0.9929;RSQ=0.9832;ERATE=0.0005;THETA=0.0006;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 77966633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0460;AVGPOST=0.9972;RSQ=0.9783;ERATE=0.0005;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 77966655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1841;AVGPOST=0.9961;RSQ=0.9919;ERATE=0.0005;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 77966728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.674;LDAF=0.0256;AVGPOST=0.9746;RSQ=0.6152;ERATE=0.0077;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77966730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5504;AVGPOST=0.9962;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 77966772 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1854;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 77967072 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9002;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77967098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1938;AVGPOST=0.9857;RSQ=0.9693;ERATE=0.0050;THETA=0.0006;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 77967167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1866;AVGPOST=0.9971;RSQ=0.9929;ERATE=0.0006;THETA=0.0004;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 77967288 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9044;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77967476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6841;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77967550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4905;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77967552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.727;LDAF=0.0155;AVGPOST=0.9883;RSQ=0.6929;ERATE=0.0020;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77967591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0048;AVGPOST=0.9950;RSQ=0.6010;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77967619 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0462;AVGPOST=0.9976;RSQ=0.9835;ERATE=0.0004;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 77967837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1851;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 77967907 . C CTA 311 PASS INDEL;BAVGPOST=0.994;BRSQ=0.674;LDAF=0.0127;AVGPOST=0.9902;RSQ=0.6915;ERATE=0.0006;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77967909 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0211;AVGPOST=0.9966;RSQ=0.9396;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77967986 . T TC 286 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77968082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.969;LDAF=0.0551;AVGPOST=0.9956;RSQ=0.9700;ERATE=0.0004;THETA=0.0002;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 77968118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6960;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77968147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4483;AVGPOST=0.9949;RSQ=0.9931;ERATE=0.0007;THETA=0.0003;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 77968223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.972;LDAF=0.0715;AVGPOST=0.9965;RSQ=0.9805;ERATE=0.0003;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 77968241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77968242 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0457;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 77968254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8908;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77968258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0084;AVGPOST=0.9992;RSQ=0.9674;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77968283 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4480;AVGPOST=0.9972;RSQ=0.9962;ERATE=0.0003;THETA=0.0030;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 77968312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0457;AVGPOST=0.9966;RSQ=0.9754;ERATE=0.0004;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 77968467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4033;AVGPOST=0.9957;RSQ=0.9936;ERATE=0.0005;THETA=0.0005;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 77968505 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1077;AVGPOST=0.9973;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 77968510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5647;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77968545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4029;AVGPOST=0.9962;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 77968634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0460;AVGPOST=0.9986;RSQ=0.9870;ERATE=0.0005;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 77968673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5621;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77968678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0067;AVGPOST=0.9977;RSQ=0.8646;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77968693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0455;AVGPOST=0.9992;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 77968810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0102;AVGPOST=0.9969;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77968814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6666;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77968843 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5443;AVGPOST=0.9910;RSQ=0.9888;ERATE=0.0009;THETA=0.0005;AC=1194;AN=2184 GT:DS:GL:BD 0.54670328 1
1 77969006 . C CA 100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7090;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77969269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6749;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77969302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.946;LDAF=0.2266;AVGPOST=0.9903;RSQ=0.9816;ERATE=0.0008;THETA=0.0008;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 77969547 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8213;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77969549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.9016;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77969592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0476;AVGPOST=0.9963;RSQ=0.9757;ERATE=0.0005;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77969602 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9441;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77969606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8639;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77969623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5205;ERATE=0.0004;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77969677 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77969690 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9056;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77969930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7039;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77969994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0441;AVGPOST=0.9979;RSQ=0.9853;ERATE=0.0003;THETA=0.0008;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 77970014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0288;AVGPOST=0.9981;RSQ=0.9789;ERATE=0.0004;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 77970033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1854;AVGPOST=0.9964;RSQ=0.9914;ERATE=0.0005;THETA=0.0007;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 77970039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.7170;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77970155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5768;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77970164 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0442;AVGPOST=0.9979;RSQ=0.9859;ERATE=0.0004;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 77970232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.5986;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77970419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.571;LDAF=0.0160;AVGPOST=0.9836;RSQ=0.5917;ERATE=0.0044;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77970463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5650;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77970472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7556;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77970563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.9689;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 77970732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.4853;ERATE=0.0009;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77970734 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1293;AVGPOST=0.9983;RSQ=0.9934;ERATE=0.0005;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 77970940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.5766;AVGPOST=0.9949;RSQ=0.9915;ERATE=0.0013;THETA=0.0004;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 77970974 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.964;LDAF=0.1663;AVGPOST=0.9968;RSQ=0.9901;ERATE=0.0007;THETA=0.0003;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 77970982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.729;LDAF=0.0080;AVGPOST=0.9972;RSQ=0.8577;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77971107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.964;LDAF=0.3772;AVGPOST=0.9830;RSQ=0.9756;ERATE=0.0007;THETA=0.0006;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 77971108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4058;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77971116 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.658;LDAF=0.9097;AVGPOST=0.9272;RSQ=0.6574;ERATE=0.0106;THETA=0.0002;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 77971148 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.976;LDAF=0.5684;AVGPOST=0.9637;RSQ=0.9474;ERATE=0.0084;THETA=0.0003;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 77971167 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77971258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7332;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77971301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77971311 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5749;AVGPOST=0.9963;RSQ=0.9944;ERATE=0.0009;THETA=0.0003;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 77971332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5759;AVGPOST=0.9954;RSQ=0.9928;ERATE=0.0007;THETA=0.0004;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 77971338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77971352 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1682;AVGPOST=0.9966;RSQ=0.9893;ERATE=0.0012;THETA=0.0002;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 77971359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9382;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77971372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5777;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0007;THETA=0.0005;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 77971387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5783;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=1264;AN=2184 GT:DS:GL:BD 0.57875460 1
1 77971598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0206;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0004;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77971634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77971654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0208;AVGPOST=0.9994;RSQ=0.9864;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77971673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7142;ERATE=0.0004;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77971684 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8465;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77971738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1599;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0004;THETA=0.0006;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 77971756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5753;AVGPOST=0.9943;RSQ=0.9915;ERATE=0.0009;THETA=0.0008;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 77971820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.944;LDAF=0.5697;AVGPOST=0.9849;RSQ=0.9780;ERATE=0.0017;THETA=0.0004;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 77971864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77971966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0033;AVGPOST=0.9964;RSQ=0.5603;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77971978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.755;BRSQ=0.609;LDAF=0.3899;AVGPOST=0.7806;RSQ=0.6837;ERATE=0.0272;THETA=0.0005;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 77972047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.839;BRSQ=0.754;LDAF=0.4704;AVGPOST=0.8302;RSQ=0.7654;ERATE=0.0142;THETA=0.0008;AC=1053;AN=2184 GT:DS:GL:BD 0.48214287 0
1 77972089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.598;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.5503;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77972123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.922;LDAF=0.5460;AVGPOST=0.9483;RSQ=0.9230;ERATE=0.0087;THETA=0.0005;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 77972128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.965;LDAF=0.5621;AVGPOST=0.9773;RSQ=0.9693;ERATE=0.0012;THETA=0.0004;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 77972171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.971;LDAF=0.5657;AVGPOST=0.9850;RSQ=0.9792;ERATE=0.0006;THETA=0.0006;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 77972187 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.971;LDAF=0.5661;AVGPOST=0.9831;RSQ=0.9757;ERATE=0.0010;THETA=0.0005;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 77972200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1929;AVGPOST=0.9987;RSQ=0.9962;ERATE=0.0005;THETA=0.0009;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 77972273 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8812;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77972302 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3408;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0006;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 77972359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0509;AVGPOST=0.9989;RSQ=0.9888;ERATE=0.0004;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77972501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77972678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6646;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77972684 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5692;AVGPOST=0.9961;RSQ=0.9937;ERATE=0.0010;THETA=0.0006;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 77972718 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9672;AVGPOST=0.9968;RSQ=0.9640;ERATE=0.0005;THETA=0.0002;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 77972737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8037;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77972738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5136;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77972760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0818;AVGPOST=0.9990;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 77972808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8175;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77972827 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77972843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77972897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3433;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77972923 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5772;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0005;THETA=0.0006;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 77972940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5781;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0005;THETA=0.0003;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 77972980 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0111;AVGPOST=0.9993;RSQ=0.9741;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 77973011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5778;AVGPOST=0.9974;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=1264;AN=2184 GT:DS:GL:BD 0.57875460 1
1 77973021 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973352 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77973375 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77973468 . AC A 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4622;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5779;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0005;THETA=0.0006;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 77973506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8806;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77973689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77973725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.437;LDAF=0.0143;AVGPOST=0.9786;RSQ=0.4056;ERATE=0.0020;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77973742 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.3860;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77973788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6504;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77973789 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0217;AVGPOST=0.9993;RSQ=0.9863;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77973801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2228;AVGPOST=0.9963;RSQ=0.9916;ERATE=0.0006;THETA=0.0002;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 77973874 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5743;AVGPOST=0.9921;RSQ=0.9890;ERATE=0.0010;THETA=0.0006;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 77973888 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77973913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6653;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77973925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3697;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 77973956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5777;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0007;AC=1262;AN=2184 GT:DS:GL:BD 0.57783884 1
1 77974091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77974119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5169;AVGPOST=0.9969;RSQ=0.9951;ERATE=0.0007;THETA=0.0004;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 77974169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3850;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 77974173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5797;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0005;THETA=0.0011;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 77974187 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9735;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77974214 rs113358264 C CTCCTCTGAG 127940 PASS INDEL;BAVGPOST=0.951;BRSQ=0.923;LDAF=0.5572;AVGPOST=0.9550;RSQ=0.9386;ERATE=0.0074;THETA=0.0002;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 77974232 rs71684555 C CCTCTGAGTA 126160 PASS INDEL;BAVGPOST=0.944;BRSQ=0.910;LDAF=0.5283;AVGPOST=0.9235;RSQ=0.8921;ERATE=0.0280;THETA=0.0002;AC=1166;AN=2184 GT:DS:GL:BD 0.53388280 1
1 77974234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.797;LDAF=0.0095;AVGPOST=0.9960;RSQ=0.8243;ERATE=0.0006;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77974236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0411;AVGPOST=0.9983;RSQ=0.9817;ERATE=0.0003;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 77974245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5795;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0005;THETA=0.0005;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 77974256 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5689;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 77974281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7405;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77974284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5698;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0009;THETA=0.0005;AC=1244;AN=2184 GT:DS:GL:BD 0.56959707 1
1 77974348 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0097;AVGPOST=0.9994;RSQ=0.9747;ERATE=0.0004;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77974376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9787;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77974402 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8913;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77974514 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1947;AVGPOST=0.9986;RSQ=0.9962;ERATE=0.0005;THETA=0.0007;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 77974581 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77974604 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77974625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9435;ERATE=0.0018;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77974679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5781;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 77974703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77974713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0754;AVGPOST=0.9988;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 77974755 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5306;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77974767 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1821;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 77974814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5787;AVGPOST=0.9966;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 77974833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5786;AVGPOST=0.9967;RSQ=0.9954;ERATE=0.0004;THETA=0.0019;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 77974854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5783;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0006;THETA=0.0004;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 77974897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5785;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 77974919 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0965;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 77974940 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6696;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77974963 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.5711;AVGPOST=0.9919;RSQ=0.9893;ERATE=0.0004;THETA=0.0005;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 77974998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.958;LDAF=0.1580;AVGPOST=0.9927;RSQ=0.9801;ERATE=0.0006;THETA=0.0004;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 77974999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9574;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77975011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77975031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9786;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 77975088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1824;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0006;THETA=0.0006;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 77975094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0857;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 77975212 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6442;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77975309 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5792;AVGPOST=0.9974;RSQ=0.9962;ERATE=0.0006;THETA=0.0004;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 77975329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.930;LDAF=0.0280;AVGPOST=0.9966;RSQ=0.9493;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 77975382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0396;AVGPOST=0.9994;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 77975405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5791;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0004;AC=1265;AN=2184 GT:DS:GL:BD 0.57921243 1
1 77975421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0064;AVGPOST=0.9968;RSQ=0.7856;ERATE=0.0006;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77975476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7095;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77975557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77975569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9947;RSQ=0.5831;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77975598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1794;AVGPOST=0.9988;RSQ=0.9965;ERATE=0.0005;THETA=0.0013;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 77975628 rs59625190 TGA T 39668 PASS INDEL;BAVGPOST=0.933;BRSQ=0.867;LDAF=0.5398;AVGPOST=0.8945;RSQ=0.8303;ERATE=0.0497;THETA=0.0003;AC=1197;AN=2184 GT:DS:GL:BD 0.54807693 1
1 77975639 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77975876 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77975947 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6162;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77975965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8832;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77975972 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8362;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77976038 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8350;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77976042 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6648;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77976084 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3090;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0009;THETA=0.0003;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 77976131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4643;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77976222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0082;AVGPOST=0.9994;RSQ=0.9663;ERATE=0.0003;THETA=0.0024;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77976241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77976269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4885;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77976289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0161;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77976300 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5243;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=1146;AN=2184 GT:DS:GL:BD 0.52472526 1
1 77976346 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9832;ERATE=0.0003;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77976359 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9992;AVGPOST=0.9985;RSQ=0.0971;ERATE=0.0005;THETA=0.0002;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 77976533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.712;LDAF=0.1696;AVGPOST=0.9080;RSQ=0.7550;ERATE=0.0056;THETA=0.0003;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 77976547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.642;LDAF=0.0994;AVGPOST=0.9292;RSQ=0.6913;ERATE=0.0073;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 77976549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.764;LDAF=0.2324;AVGPOST=0.8852;RSQ=0.7596;ERATE=0.0147;THETA=0.0010;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 77976555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.615;LDAF=0.0645;AVGPOST=0.9484;RSQ=0.6757;ERATE=0.0003;THETA=0.0003;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 77976556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0092;AVGPOST=0.9977;RSQ=0.9029;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77976713 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 77976775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6937;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77976822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77976989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5154;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1125;AN=2184 GT:DS:GL:BD 0.51510990 1
1 77977032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77977063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9675;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77977092 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.863;LDAF=0.3593;AVGPOST=0.9343;RSQ=0.8486;ERATE=0.0671;THETA=0.0005;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 77977130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2829;AVGPOST=0.9961;RSQ=0.9922;ERATE=0.0005;THETA=0.0003;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 77977177 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77977194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9835;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77977269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9465;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77977337 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8631;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77977442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4903;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77977467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77977496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8626;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77977499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77977565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0048;AVGPOST=0.9960;RSQ=0.7118;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77977575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5291;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 77977604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7442;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77977650 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9809;ERATE=0.0003;THETA=0.0026;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77977762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1792;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0005;THETA=0.0006;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 77977792 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7183;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77977895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3094;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 77978024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8899;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77978110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9813;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77978136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1794;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 77978258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77978259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8568;AVGPOST=0.9947;RSQ=0.9818;ERATE=0.0008;THETA=0.0003;AC=1875;AN=2184 GT:DS:GL:BD 0.85851645 1
1 77978303 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.3056;AVGPOST=0.9958;RSQ=0.9913;ERATE=0.0006;THETA=0.0002;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 77978323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.974;LDAF=0.3069;AVGPOST=0.9914;RSQ=0.9840;ERATE=0.0020;THETA=0.0002;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 77978348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0394;AVGPOST=0.9966;RSQ=0.9652;ERATE=0.0005;THETA=0.0006;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 77978349 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8571;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77978406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.829;LDAF=0.4167;AVGPOST=0.8880;RSQ=0.8215;ERATE=0.0269;THETA=0.0004;AC=932;AN=2184 GT:DS:GL:BD 0.42673993 0
1 77978422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.700;LDAF=0.1093;AVGPOST=0.9382;RSQ=0.7524;ERATE=0.0038;THETA=0.0002;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 77978447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.622;LDAF=0.1027;AVGPOST=0.9206;RSQ=0.6690;ERATE=0.0101;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 77978455 . GGAA G 809 PASS INDEL;BAVGPOST=0.968;BRSQ=0.486;LDAF=0.0692;AVGPOST=0.9140;RSQ=0.4649;ERATE=0.0140;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 77978470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3102;AVGPOST=0.9878;RSQ=0.9776;ERATE=0.0037;THETA=0.0003;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 77978592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77978607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77978633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1796;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0008;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 77978759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77979057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7297;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77979257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77979290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77979305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0354;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 77979444 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77979461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6828;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77979507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77979516 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77979538 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9456;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77979541 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77979629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9416;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77979630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77979803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0475;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77979865 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77979928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0476;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0007;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77979966 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77980048 rs59494715 G GC 19949 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2197;AVGPOST=0.9968;RSQ=0.9926;ERATE=0.0004;THETA=0.0043;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 77980053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5134;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77980068 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.3275;AVGPOST=0.9913;RSQ=0.9852;ERATE=0.0007;THETA=0.0008;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 77980199 rs56944734 ACT A 1468 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0094;AVGPOST=0.9979;RSQ=0.9134;ERATE=0.0005;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77980260 . CTG C 128 PASS INDEL;BAVGPOST=0.985;BRSQ=0.510;LDAF=0.0469;AVGPOST=0.9395;RSQ=0.4823;ERATE=0.0014;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 77980263 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1631;AVGPOST=0.9979;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 77980365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2667;AVGPOST=0.9964;RSQ=0.9926;ERATE=0.0004;THETA=0.0005;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 77980473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8475;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=1850;AN=2184 GT:DS:GL:BD 0.84706962 1
1 77980502 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77980535 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5885;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77980605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5810;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77980614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4772;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77980646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0483;AVGPOST=0.9977;RSQ=0.9803;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77980668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0110;AVGPOST=0.9984;RSQ=0.9378;ERATE=0.0003;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 77980875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9164;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77981156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77981240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9340;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77981241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77981283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77981290 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0141;AVGPOST=0.9982;RSQ=0.9476;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 77981402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1388;AVGPOST=0.9977;RSQ=0.9929;ERATE=0.0004;THETA=0.0009;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 77981440 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6218;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77981601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0481;AVGPOST=0.9978;RSQ=0.9838;ERATE=0.0004;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 77981676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0472;AVGPOST=0.9984;RSQ=0.9902;ERATE=0.0003;THETA=0.0012;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77981695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0471;AVGPOST=0.9986;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77981698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4915;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77981775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7377;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77981776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.4793;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77981846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9266;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77981847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6582;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77982006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77982069 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8284;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77982209 rs112671091 TG T 821 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9735;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77982253 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77982288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7396;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77982400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77982403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6809;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77982442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7365;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77982505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.7161;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77982591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77982595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5879;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77982749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5930;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77982834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0178;AVGPOST=0.9989;RSQ=0.9754;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 77982881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0090;AVGPOST=0.9978;RSQ=0.9134;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 77983082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8169;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77983159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1390;AVGPOST=0.9981;RSQ=0.9940;ERATE=0.0003;THETA=0.0022;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 77983177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7285;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77983178 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0508;AVGPOST=0.9991;RSQ=0.9934;ERATE=0.0003;THETA=0.0013;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 77983180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77983367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8190;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77983402 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6825;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77983467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0003;THETA=0.0008;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 77983580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0100;AVGPOST=0.9973;RSQ=0.8940;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77983831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8811;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77984078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8665;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77984299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0323;AVGPOST=0.9980;RSQ=0.9770;ERATE=0.0004;THETA=0.0021;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 77984453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0053;AVGPOST=0.9981;RSQ=0.8748;ERATE=0.0004;THETA=0.0033;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77984570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77984583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8359;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77984600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77984606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0087;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77984739 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.788;LDAF=0.0067;AVGPOST=0.9971;RSQ=0.8510;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77984993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7932;AVGPOST=0.9964;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 77985100 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9369;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77985165 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77985208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8055;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77985285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0085;AVGPOST=0.9982;RSQ=0.9045;ERATE=0.0010;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77985308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77985323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77985348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77985416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77985451 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77985480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77985585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77985592 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1104;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 77985632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9197;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77985649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5247;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77985667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.834;LDAF=0.0146;AVGPOST=0.9931;RSQ=0.8208;ERATE=0.0006;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77985675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5590;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77985702 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77985788 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1358;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0004;THETA=0.0009;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 77985827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7946;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0003;THETA=0.0007;AC=1736;AN=2184 GT:DS:GL:BD 0.79487181 1
1 77985899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4214;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77985935 . TA T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5541;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77985939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77986031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77986057 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77986088 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0366;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0004;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 77986163 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77986329 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4498;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77986609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9327;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77986676 . CT C 236 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0048;AVGPOST=0.9974;RSQ=0.8004;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77986860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6234;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0006;THETA=0.0004;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 77986872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9318;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77986950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0194;AVGPOST=0.9968;RSQ=0.9461;ERATE=0.0009;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77987034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8439;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77987067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0178;AVGPOST=0.9958;RSQ=0.9032;ERATE=0.0003;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77987157 . GT G 146 PASS INDEL;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0068;AVGPOST=0.9984;RSQ=0.8867;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 77987183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0077;AVGPOST=0.9938;RSQ=0.6727;ERATE=0.0005;THETA=0.0035;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77987189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.973;LDAF=0.6067;AVGPOST=0.9743;RSQ=0.9629;ERATE=0.0026;THETA=0.0007;AC=1341;AN=2184 GT:DS:GL:BD 0.61401099 1
1 77987309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.8989;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77987313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3702;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77987403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.9048;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77987560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77987594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0005;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77987659 . G GA 1295 PASS INDEL;BAVGPOST=0.996;BRSQ=0.871;LDAF=0.0176;AVGPOST=0.9886;RSQ=0.7530;ERATE=0.0026;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 77987721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77987779 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.722;LDAF=0.0117;AVGPOST=0.9952;RSQ=0.8280;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77988064 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0034;AVGPOST=0.9977;RSQ=0.7189;ERATE=0.0004;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77988099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.872;LDAF=0.0126;AVGPOST=0.9960;RSQ=0.8841;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77988336 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0039;AVGPOST=0.9950;RSQ=0.4747;ERATE=0.0007;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77988389 . T TA 349 PASS INDEL;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8580;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77988464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6217;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77988561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77988580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0035;AVGPOST=0.9949;RSQ=0.5435;ERATE=0.0004;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77988724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9447;ERATE=0.0004;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77988834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77988867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0065;AVGPOST=0.9980;RSQ=0.8714;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77988870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0105;AVGPOST=0.9973;RSQ=0.9123;ERATE=0.0004;THETA=0.0122;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77988898 . GCCCACCCAAC G 2833 PASS INDEL;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0154;AVGPOST=0.9956;RSQ=0.8859;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 77988920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3137;AVGPOST=0.9808;RSQ=0.9674;ERATE=0.0031;THETA=0.0005;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 77989054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.712;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7406;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77989183 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5521;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77989228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6794;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77989347 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.7329;AVGPOST=0.9855;RSQ=0.9727;ERATE=0.0026;THETA=0.0003;AC=1605;AN=2184 GT:DS:GL:BD 0.73489010 1
1 77989348 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0005;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77989403 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6861;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77989467 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7437;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77989470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.6942;ERATE=0.0004;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77989544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77989558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0167;AVGPOST=0.9986;RSQ=0.9672;ERATE=0.0005;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 77989660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.776;LDAF=0.0101;AVGPOST=0.9922;RSQ=0.7110;ERATE=0.0022;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 77989738 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1097;AVGPOST=0.9957;RSQ=0.9829;ERATE=0.0010;THETA=0.0007;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 77989905 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8551;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77989938 . A AT 1209 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0077;AVGPOST=0.9982;RSQ=0.8982;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77989942 rs113336401 T TC 240 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0098;AVGPOST=0.9975;RSQ=0.9004;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77989945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8326;ERATE=0.0006;THETA=0.0062;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77989946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8328;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77989947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8407;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77990104 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0070;AVGPOST=0.9995;RSQ=0.9708;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77990105 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0055;AVGPOST=0.9985;RSQ=0.8874;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77990109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9099;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77990263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5928;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990270 . G GA 2052 PASS INDEL;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0166;AVGPOST=0.9977;RSQ=0.9490;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 77990352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77990438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7353;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77990690 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77990732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9234;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77990769 rs112839338 T TG 39 PASS INDEL;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5046;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77990808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9731;ERATE=0.0003;THETA=0.0021;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 77990850 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77991068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6612;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77991089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77991123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0108;AVGPOST=0.9983;RSQ=0.9426;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 77991150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77991358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0072;AVGPOST=0.9995;RSQ=0.9732;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77991407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77991428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77991762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77991805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0037;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77991806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.6967;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77991987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8756;ERATE=0.0003;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77992145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2416;AVGPOST=0.9954;RSQ=0.9909;ERATE=0.0005;THETA=0.0003;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 77992164 . C CCA 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.2510;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77992319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2199;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0004;THETA=0.0028;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 77992353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.634;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.7968;ERATE=0.0007;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77992356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=0.9982;RSQ=0.9373;ERATE=0.0005;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77992403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5419;AVGPOST=0.9923;RSQ=0.9882;ERATE=0.0024;THETA=0.0004;AC=1182;AN=2184 GT:DS:GL:BD 0.54120880 1
1 77992476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0124;AVGPOST=0.9987;RSQ=0.9569;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77992516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2191;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 77992537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7228;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77992658 rs11463187 T TG 25894 PASS INDEL;BAVGPOST=0.991;BRSQ=0.975;LDAF=0.2303;AVGPOST=0.9861;RSQ=0.9671;ERATE=0.0019;THETA=0.0028;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 77992727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.2284;AVGPOST=0.9968;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 77992741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77992797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6686;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77992848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77992876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7221;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77992950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77993061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77993308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77993355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0241;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 77993403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2351;AVGPOST=0.9961;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 77993512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6413;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0004;THETA=0.0007;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 77993514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77993729 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9064;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77993764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.833;LDAF=0.0109;AVGPOST=0.9955;RSQ=0.8385;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 77993794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.8955;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 77993922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.6431;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=1405;AN=2184 GT:DS:GL:BD 0.64331502 1
1 77994071 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6120;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77994107 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7449;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77994227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8934;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77994276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6689;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77994291 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5052;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77994307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77994367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6365;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77994436 . G GC 648 PASS INDEL;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0189;AVGPOST=0.9920;RSQ=0.8449;ERATE=0.0008;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77994635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.533;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7123;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77994644 rs35924229 CA C 122 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8136;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77994882 . G GA 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4544;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77994936 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77995017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0079;AVGPOST=0.9940;RSQ=0.7230;ERATE=0.0009;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77995101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8492;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 77995247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0753;AVGPOST=0.9963;RSQ=0.9825;ERATE=0.0005;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 77995287 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7791;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77995478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4265;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77995500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0080;AVGPOST=0.9980;RSQ=0.9065;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77995523 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9489;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77995557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0201;AVGPOST=0.9959;RSQ=0.9296;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 77995615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5533;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=1209;AN=2184 GT:DS:GL:BD 0.55357140 1
1 77995685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6173;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77995783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77995809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6297;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0002;AC=1376;AN=2184 GT:DS:GL:BD 0.63003665 1
1 77995830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2651;AVGPOST=0.9980;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 77996125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0180;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 77996212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6401;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77996268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7760;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77996314 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 77996354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0264;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 77996378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 77996426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77996810 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0041;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 77996863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9691;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77996866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9525;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77996888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77996895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77996926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77996969 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77996976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77997025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 77997039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77997051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0028;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 77997084 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9240;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77997126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0013;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77997164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2550;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0005;THETA=0.0005;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 77997184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0325;AVGPOST=0.9992;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 77997219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0279;AVGPOST=0.9986;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 77997335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77997387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2738;AVGPOST=0.9933;RSQ=0.9860;ERATE=0.0011;THETA=0.0076;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 77997592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.879;LDAF=0.3441;AVGPOST=0.9081;RSQ=0.8502;ERATE=0.0199;THETA=0.0015;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 77997686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.726;LDAF=0.0637;AVGPOST=0.9595;RSQ=0.7673;ERATE=0.0031;THETA=0.0070;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 77997699 . AG A 320 PASS INDEL;BAVGPOST=0.938;BRSQ=0.503;LDAF=0.0587;AVGPOST=0.9495;RSQ=0.6718;ERATE=0.0014;THETA=0.0061;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77997708 . G GGGA 1643 PASS INDEL;BAVGPOST=0.931;BRSQ=0.596;LDAF=0.1003;AVGPOST=0.9215;RSQ=0.6697;ERATE=0.0059;THETA=0.0005;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 77997709 . GA G 930 PASS INDEL;BAVGPOST=0.932;BRSQ=0.594;LDAF=0.0976;AVGPOST=0.9215;RSQ=0.6667;ERATE=0.0051;THETA=0.0016;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 77997711 . AAAGG A 526 PASS INDEL;BAVGPOST=0.920;BRSQ=0.371;LDAF=0.1266;AVGPOST=0.8440;RSQ=0.4251;ERATE=0.0203;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 77997720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.482;LDAF=0.0755;AVGPOST=0.9254;RSQ=0.5967;ERATE=0.0044;THETA=0.0007;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 77997724 . AAGGAAAGG A 2484 PASS INDEL;BAVGPOST=0.904;BRSQ=0.365;LDAF=0.1550;AVGPOST=0.8270;RSQ=0.4809;ERATE=0.0196;THETA=0.0009;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 77997748 . GGAA G 160 PASS INDEL;BAVGPOST=0.972;BRSQ=0.291;LDAF=0.0666;AVGPOST=0.9175;RSQ=0.5017;ERATE=0.0053;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 77997766 . GA G 90 PASS INDEL;BAVGPOST=0.973;BRSQ=0.386;LDAF=0.0706;AVGPOST=0.9153;RSQ=0.5217;ERATE=0.0050;THETA=0.0017;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 77997775 . AG A 119 PASS INDEL;BAVGPOST=0.967;BRSQ=0.366;LDAF=0.0586;AVGPOST=0.9376;RSQ=0.5767;ERATE=0.0026;THETA=0.0041;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77997781 . AG A 892 PASS INDEL;BAVGPOST=0.883;BRSQ=0.412;LDAF=0.1668;AVGPOST=0.8396;RSQ=0.5549;ERATE=0.0125;THETA=0.0006;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 77997789 . GA G 748 PASS INDEL;BAVGPOST=0.870;BRSQ=0.378;LDAF=0.1794;AVGPOST=0.8060;RSQ=0.4676;ERATE=0.0202;THETA=0.0025;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 77997792 . GAA G 70 PASS INDEL;BAVGPOST=0.930;BRSQ=0.226;LDAF=0.1109;AVGPOST=0.8668;RSQ=0.4775;ERATE=0.0081;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 77997796 . A AG 10743 PASS INDEL;BAVGPOST=0.876;BRSQ=0.267;LDAF=0.8485;AVGPOST=0.8110;RSQ=0.4037;ERATE=0.0173;THETA=0.0023;AC=1973;AN=2184 GT:DS:GL:BD 0.90338826 1
1 77997798 . A AAG 562 PASS INDEL;BAVGPOST=0.981;BRSQ=0.546;LDAF=0.0365;AVGPOST=0.9596;RSQ=0.5422;ERATE=0.0058;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 77997852 . G GA 40228 PASS INDEL;BAVGPOST=0.998;BRSQ=0;LDAF=0.9817;AVGPOST=0.9774;RSQ=0.5067;ERATE=0.0018;THETA=0.0006;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 77997891 . A AG 14036 PASS INDEL;BAVGPOST=0.965;BRSQ=0.283;LDAF=0.9332;AVGPOST=0.9044;RSQ=0.3823;ERATE=0.0101;THETA=0.0011;AC=2108;AN=2184 GT:DS:GL:BD 0.96520144 1
1 77997892 . GA G 194 PASS INDEL;BAVGPOST=0.969;BRSQ=0.424;LDAF=0.0395;AVGPOST=0.9802;RSQ=0.7871;ERATE=0.0017;THETA=0.0022;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 77997928 . AAGG A 546 PASS INDEL;BAVGPOST=0.960;BRSQ=0.388;LDAF=0.0697;AVGPOST=0.9201;RSQ=0.5068;ERATE=0.0070;THETA=0.0020;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 77997929 . GGGGA G 816 PASS INDEL;BAVGPOST=0.932;BRSQ=0.294;LDAF=0.1273;AVGPOST=0.8294;RSQ=0.3853;ERATE=0.0132;THETA=0.0006;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 77998002 . GAGGA G 623 PASS INDEL;BAVGPOST=0.952;BRSQ=0.612;LDAF=0.0864;AVGPOST=0.9293;RSQ=0.6596;ERATE=0.0036;THETA=0.0014;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 77998021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.719;LDAF=0.0521;AVGPOST=0.9697;RSQ=0.7620;ERATE=0.0012;THETA=0.0012;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 77998025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0206;AVGPOST=0.9955;RSQ=0.9110;ERATE=0.0005;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77998098 . AGGG A 18 PASS INDEL;BAVGPOST=0.998;BRSQ=0.371;LDAF=0.0047;AVGPOST=0.9935;RSQ=0.4371;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77998123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.873;LDAF=0.2151;AVGPOST=0.9511;RSQ=0.8913;ERATE=0.0106;THETA=0.0021;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 77998131 . TGGAG T 2565 PASS INDEL;BAVGPOST=0.991;BRSQ=0.917;LDAF=0.0521;AVGPOST=0.9713;RSQ=0.8199;ERATE=0.0017;THETA=0.0106;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 77998131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.783;LDAF=0.0356;AVGPOST=0.9702;RSQ=0.6500;ERATE=0.0059;THETA=0.0026;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 77998137 . AG A 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0066;AVGPOST=0.9924;RSQ=0.5620;ERATE=0.0009;THETA=0.0053;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 77998170 . A AGGGG 1811 PASS INDEL;BAVGPOST=0.953;BRSQ=0.568;LDAF=0.0727;AVGPOST=0.9498;RSQ=0.7232;ERATE=0.0053;THETA=0.0007;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 77998219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.710;LDAF=0.0266;AVGPOST=0.9809;RSQ=0.7254;ERATE=0.0010;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 77998224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3630;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77998240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.725;LDAF=0.0136;AVGPOST=0.9896;RSQ=0.7255;ERATE=0.0005;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77998252 . G GA 10 PASS INDEL;BAVGPOST=0.992;BRSQ=0.769;LDAF=0.0161;AVGPOST=0.9874;RSQ=0.7080;ERATE=0.0013;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 77998270 . A AG 392 PASS INDEL;BAVGPOST=0.992;BRSQ=0.774;LDAF=0.0230;AVGPOST=0.9851;RSQ=0.7503;ERATE=0.0009;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 77998271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.885;LDAF=0.0225;AVGPOST=0.9904;RSQ=0.8400;ERATE=0.0009;THETA=0.0022;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 77998279 . G GAA 235 PASS INDEL;BAVGPOST=0.995;BRSQ=0.905;LDAF=0.0217;AVGPOST=0.9881;RSQ=0.7987;ERATE=0.0005;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77998279 . AAAG A 960 PASS INDEL;BAVGPOST=0.995;BRSQ=0.794;LDAF=0.0158;AVGPOST=0.9882;RSQ=0.6964;ERATE=0.0021;THETA=0.0012;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77998286 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9973;RSQ=0.8180;ERATE=0.0003;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 77998306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77998455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77998526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6888;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77998547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77998674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0469;AVGPOST=0.9992;RSQ=0.9932;ERATE=0.0003;THETA=0.0013;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77998697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 77998812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.973;LDAF=0.4681;AVGPOST=0.9785;RSQ=0.9726;ERATE=0.0111;THETA=0.0006;AC=1026;AN=2184 GT:DS:GL:BD 0.46978021 0
1 77998885 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.972;LDAF=0.4126;AVGPOST=0.9805;RSQ=0.9732;ERATE=0.0077;THETA=0.0005;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 77998897 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77998900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 77998904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7167;ERATE=0.0003;THETA=0.0089;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77998906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.5081;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77998934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0468;AVGPOST=0.9993;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 77998979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77998997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7600;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77998998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7360;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 77999074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7640;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77999112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0200;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77999205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0746;AVGPOST=0.9984;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 77999243 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9724;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77999282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0125;AVGPOST=0.9993;RSQ=0.9739;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 77999324 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7329;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77999338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0026;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 77999349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4874;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 77999461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0185;AVGPOST=0.9989;RSQ=0.9757;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 77999635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0199;AVGPOST=0.9983;RSQ=0.9668;ERATE=0.0005;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 77999640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 77999668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 77999695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7744;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77999701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 77999764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.982;LDAF=0.5586;AVGPOST=0.9886;RSQ=0.9847;ERATE=0.0005;THETA=0.0006;AC=1222;AN=2184 GT:DS:GL:BD 0.55952382 1
1 77999836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0048;AVGPOST=0.9942;RSQ=0.5613;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 77999869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0058;AVGPOST=0.9986;RSQ=0.9085;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 77999919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3856;AVGPOST=0.9955;RSQ=0.9915;ERATE=0.0008;THETA=0.0004;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 77999920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0809;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 78000075 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78000131 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78000134 . AGT A 192 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78000170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0055;AVGPOST=0.9993;RSQ=0.9448;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78000198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0824;AVGPOST=0.9969;RSQ=0.9842;ERATE=0.0016;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 78000214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78000215 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0019;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78000227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78000325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3840;AVGPOST=0.9955;RSQ=0.9916;ERATE=0.0005;THETA=0.0003;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 78000384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0858;AVGPOST=0.9950;RSQ=0.9741;ERATE=0.0008;THETA=0.0026;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 78000466 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.687;LDAF=0.0218;AVGPOST=0.9785;RSQ=0.6260;ERATE=0.0023;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78000510 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6531;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78000656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7217;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78000695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7676;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78000725 . CT C 80 PASS INDEL;BAVGPOST=0.998;BRSQ=0.392;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5921;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78000798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1667;AVGPOST=0.9922;RSQ=0.9769;ERATE=0.0009;THETA=0.0008;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 78000947 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9975;RSQ=0.9446;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78000995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78001008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6307;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78001015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4681;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78001145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78001293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8691;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78001312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7250;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78001340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.9806;AVGPOST=0.9987;RSQ=0.9749;ERATE=0.0003;THETA=0.0004;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 78001402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.9026;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78001434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1846;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0003;THETA=0.0006;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 78001513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6746;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78001777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9590;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78001800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78001828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78001866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78002102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0267;AVGPOST=0.9996;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78002249 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78002265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9818;AVGPOST=0.9987;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 78002343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8207;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78002344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78002359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5330;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78002385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6639;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78002617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0029;AVGPOST=0.9962;RSQ=0.4795;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78002873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.693;LDAF=0.0056;AVGPOST=0.9958;RSQ=0.7151;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78002934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0192;AVGPOST=0.9991;RSQ=0.9790;ERATE=0.0005;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78002936 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0030;AVGPOST=0.9963;RSQ=0.5094;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78002990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8278;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78002996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.564;LDAF=0.0113;AVGPOST=0.9886;RSQ=0.6299;ERATE=0.0006;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78002997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0084;AVGPOST=0.9978;RSQ=0.9013;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78003082 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3800;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 78003150 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8323;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78003171 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7077;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78003197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4885;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78003246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.521;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.6174;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78003252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0281;AVGPOST=0.9967;RSQ=0.9476;ERATE=0.0005;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78003321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.516;LDAF=0.0036;AVGPOST=0.9952;RSQ=0.4353;ERATE=0.0011;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78003336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.5549;ERATE=0.0010;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78003342 rs34467176 T TA 2257 PASS INDEL;BAVGPOST=0.796;BRSQ=0.060;LDAF=0.8408;AVGPOST=0.7814;RSQ=0.3548;ERATE=0.0083;THETA=0.0003;AC=1950;AN=2184 GT:DS:GL:BD 0.89285713 1
1 78003545 rs10548253 TTA T 701 PASS INDEL;BAVGPOST=0.598;BRSQ=0.160;LDAF=0.2815;AVGPOST=0.6322;RSQ=0.2199;ERATE=0.0358;THETA=0.0001;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 78003556 . AT A 270 PASS INDEL;BAVGPOST=0.698;BRSQ=0.054;LDAF=0.1794;AVGPOST=0.7660;RSQ=0.3427;ERATE=0.0120;THETA=0.0006;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 78003568 . T TA 472 PASS INDEL;BAVGPOST=0.693;BRSQ=0.058;LDAF=0.2084;AVGPOST=0.7163;RSQ=0.2714;ERATE=0.0178;THETA=0.0006;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 78003569 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.880;BRSQ=0.749;LDAF=0.3492;AVGPOST=0.8477;RSQ=0.7446;ERATE=0.0107;THETA=0.0009;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 78003627 . T TTAA 4319 PASS INDEL;BAVGPOST=0.852;BRSQ=0.711;LDAF=0.3990;AVGPOST=0.7920;RSQ=0.6694;ERATE=0.0167;THETA=0.0004;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 78003627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7164;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78003750 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6008;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78003799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7262;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78003841 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0104;AVGPOST=0.9990;RSQ=0.9561;ERATE=0.0004;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78003960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78004052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0429;AVGPOST=0.9992;RSQ=0.9935;ERATE=0.0003;THETA=0.0008;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 78004388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3177;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 78004498 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.440;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7829;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78004541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7093;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78004550 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2196;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 78004721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3919;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=857;AN=2184 GT:DS:GL:BD 0.39239928 0
1 78004865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3167;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0005;THETA=0.0007;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 78004900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7906;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78005034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.616;LDAF=0.0067;AVGPOST=0.9955;RSQ=0.7006;ERATE=0.0006;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78005310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0521;AVGPOST=0.9943;RSQ=0.9545;ERATE=0.0006;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 78005341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.612;LDAF=0.0028;AVGPOST=0.9985;RSQ=0.7760;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78005383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0436;AVGPOST=0.9981;RSQ=0.9848;ERATE=0.0004;THETA=0.0002;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 78005462 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7148;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78005590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.633;LDAF=0.0094;AVGPOST=0.9966;RSQ=0.8467;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78005768 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.562;LDAF=0.0083;AVGPOST=0.9908;RSQ=0.5541;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78005862 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.935;LDAF=0.3819;AVGPOST=0.9401;RSQ=0.9165;ERATE=0.0083;THETA=0.0003;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 78005865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.351;LDAF=0.0039;AVGPOST=0.9943;RSQ=0.4261;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78005868 . TTTG T 54 PASS INDEL;BAVGPOST=0.993;BRSQ=0.554;LDAF=0.0162;AVGPOST=0.9807;RSQ=0.5251;ERATE=0.0037;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78005968 rs71575764 A AT 777 PASS INDEL;BAVGPOST=0.603;BRSQ=0.170;LDAF=0.3578;AVGPOST=0.6234;RSQ=0.2869;ERATE=0.0449;THETA=0.0010;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 78006141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.325;LDAF=0.0098;AVGPOST=0.9843;RSQ=0.3658;ERATE=0.0015;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78006182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.941;LDAF=0.0589;AVGPOST=0.9856;RSQ=0.9007;ERATE=0.0009;THETA=0.0007;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 78006183 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.949;LDAF=0.3180;AVGPOST=0.9790;RSQ=0.9618;ERATE=0.0020;THETA=0.0023;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 78006193 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.815;LDAF=0.0323;AVGPOST=0.9829;RSQ=0.7860;ERATE=0.0010;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 78006199 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.895;BRSQ=0.765;LDAF=0.2830;AVGPOST=0.9074;RSQ=0.8337;ERATE=0.0033;THETA=0.0009;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 78006300 rs34553650 A AT 9416 PASS INDEL;BAVGPOST=0.722;BRSQ=0.515;LDAF=0.4950;AVGPOST=0.7185;RSQ=0.5452;ERATE=0.0597;THETA=0.0005;AC=1096;AN=2184 GT:DS:GL:BD 0.50183153 1
1 78006310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.530;LDAF=0.0053;AVGPOST=0.9946;RSQ=0.5779;ERATE=0.0008;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78006360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0157;AVGPOST=0.9991;RSQ=0.9772;ERATE=0.0003;THETA=0.0012;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78006472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7406;ERATE=0.0009;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78006673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78006825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0355;AVGPOST=0.9973;RSQ=0.9712;ERATE=0.0004;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 78006842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6991;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78006865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0072;AVGPOST=0.9975;RSQ=0.8830;ERATE=0.0005;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78006930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6890;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78006985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78006998 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7834;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78007117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0226;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0004;THETA=0.0016;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78007372 rs5773104 C CCT 3815 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0141;AVGPOST=0.9984;RSQ=0.9627;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78007551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78007834 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0494;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0007;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 78007844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0250;AVGPOST=0.9985;RSQ=0.9737;ERATE=0.0005;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78008128 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7418;ERATE=0.0006;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78008362 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4429;ERATE=0.0005;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78008376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0046;AVGPOST=0.9976;RSQ=0.7773;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78008880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.623;LDAF=0.0100;AVGPOST=0.9893;RSQ=0.5518;ERATE=0.0017;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78008887 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.563;LDAF=0.0081;AVGPOST=0.9927;RSQ=0.5948;ERATE=0.0009;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78008925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.943;LDAF=0.2125;AVGPOST=0.9649;RSQ=0.9194;ERATE=0.0009;THETA=0.0008;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 78008975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4509;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78009036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.517;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6405;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78009048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5185;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78009104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.8985;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78009178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0492;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0004;THETA=0.0007;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 78009233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0004;THETA=0.0011;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78009292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.6953;ERATE=0.0005;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78009398 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6695;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78009612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8855;ERATE=0.0003;THETA=0.0031;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78009745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6582;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78009780 . A AT 260 PASS INDEL;BAVGPOST=0.995;BRSQ=0.595;LDAF=0.0157;AVGPOST=0.9792;RSQ=0.4445;ERATE=0.0033;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78009915 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0040;AVGPOST=0.9955;RSQ=0.5962;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78009964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.869;LDAF=0.0222;AVGPOST=0.9958;RSQ=0.9278;ERATE=0.0004;THETA=0.0011;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78010115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0332;AVGPOST=0.9892;RSQ=0.8622;ERATE=0.0014;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 78010156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.814;LDAF=0.0175;AVGPOST=0.9957;RSQ=0.9074;ERATE=0.0004;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78010200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.664;LDAF=0.0140;AVGPOST=0.9874;RSQ=0.6230;ERATE=0.0006;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78010202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.903;LDAF=0.0187;AVGPOST=0.9931;RSQ=0.8629;ERATE=0.0008;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78010204 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0178;AVGPOST=0.9937;RSQ=0.8683;ERATE=0.0006;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78010208 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3655;AVGPOST=0.9882;RSQ=0.9793;ERATE=0.0011;THETA=0.0007;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 78010291 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6521;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78010306 . C CT 64 PASS INDEL;BAVGPOST=0.983;BRSQ=0.538;LDAF=0.0370;AVGPOST=0.9502;RSQ=0.4581;ERATE=0.0085;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78010840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4347;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78010854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0054;AVGPOST=0.9969;RSQ=0.7882;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78010855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.530;LDAF=0.0162;AVGPOST=0.9816;RSQ=0.5324;ERATE=0.0043;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78010894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7873;ERATE=0.0004;THETA=0.0042;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78010895 . A AT 378 PASS INDEL;BAVGPOST=0.856;BRSQ=0.273;LDAF=0.1734;AVGPOST=0.7648;RSQ=0.3044;ERATE=0.0391;THETA=0.0005;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 78010997 . T TC 450 PASS INDEL;BAVGPOST=0.991;BRSQ=0.563;LDAF=0.0108;AVGPOST=0.9918;RSQ=0.6912;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78011004 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.433;LDAF=0.0034;AVGPOST=0.9959;RSQ=0.5113;ERATE=0.0010;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78011015 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.962;LDAF=0.3579;AVGPOST=0.9697;RSQ=0.9460;ERATE=0.0037;THETA=0.0011;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 78011034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.467;LDAF=0.0112;AVGPOST=0.9847;RSQ=0.4646;ERATE=0.0024;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78011041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0055;AVGPOST=0.9986;RSQ=0.8858;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78011297 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0229;AVGPOST=0.9967;RSQ=0.9462;ERATE=0.0005;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78011388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1697;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 78011648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5224;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78011718 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78011766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2093;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0005;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 78011797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78011879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6737;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78012001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1695;AVGPOST=0.9977;RSQ=0.9949;ERATE=0.0005;THETA=0.0008;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 78012125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9285;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78012196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0163;AVGPOST=0.9984;RSQ=0.9609;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78012268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9904;ERATE=0.0004;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78012272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78012353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78012359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0275;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0009;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 78012379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8384;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78012464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9191;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78012686 . CAG C 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7926;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78012826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78012851 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9311;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78012854 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78012867 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9182;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78012871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7910;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78012911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0275;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0004;THETA=0.0007;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 78013007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1876;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 78013023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8369;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78013066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78013231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9806;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78013295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78013497 rs34665456 AT A 13586 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1703;AVGPOST=0.9978;RSQ=0.9943;ERATE=0.0006;THETA=0.0004;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 78013551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78013662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78013686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1428;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0004;THETA=0.0011;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 78013791 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7974;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78013813 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8465;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78013861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4468;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78014141 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78014156 . CTTCTA C 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7447;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78014178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9450;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78014247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1703;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0005;THETA=0.0007;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 78014268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0118;AVGPOST=0.9952;RSQ=0.8562;ERATE=0.0007;THETA=0.0027;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78014546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7142;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78014576 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78014715 rs113030725 CT C 5180 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0305;AVGPOST=0.9989;RSQ=0.9867;ERATE=0.0005;THETA=0.0020;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 78014815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2369;AVGPOST=0.9967;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 78014959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78015145 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.914;LDAF=0.4520;AVGPOST=0.9342;RSQ=0.8997;ERATE=0.0124;THETA=0.0010;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 78015228 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.783;LDAF=0.2292;AVGPOST=0.8695;RSQ=0.7104;ERATE=0.0381;THETA=0.0006;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 78015230 . TG T 34779 PASS INDEL;BAVGPOST=0.981;BRSQ=0.276;LDAF=0.9888;AVGPOST=0.9802;RSQ=0.2745;ERATE=0.0023;THETA=0.0006;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 78015232 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.384;LDAF=0.9201;AVGPOST=0.8966;RSQ=0.4595;ERATE=0.0202;THETA=0.0010;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 78015233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.480;LDAF=0.0046;AVGPOST=0.9948;RSQ=0.5388;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78015317 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.948;LDAF=0.7496;AVGPOST=0.9636;RSQ=0.9243;ERATE=0.0038;THETA=0.0011;AC=1653;AN=2184 GT:DS:GL:BD 0.75686812 1
1 78015369 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5981;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78015508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7800;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78015510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78015539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0013;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78015583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7326;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78015768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9396;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78015857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6973;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78015896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78016027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7335;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78016070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0056;AVGPOST=0.9973;RSQ=0.8087;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78016085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9538;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78016086 . AAAAC A 202 PASS INDEL;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5137;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78016367 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7699;ERATE=0.0005;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78016400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1416;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0011;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 78016434 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0232;AVGPOST=0.9993;RSQ=0.9890;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78016441 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1207;AVGPOST=0.9960;RSQ=0.9832;ERATE=0.0004;THETA=0.0007;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 78016581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.870;LDAF=0.0117;AVGPOST=0.9955;RSQ=0.8700;ERATE=0.0005;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78016686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9394;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78016751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78016854 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8756;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78016912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78017026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8289;ERATE=0.0004;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78017221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0476;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78017630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9452;ERATE=0.0003;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78017669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7319;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78017762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78017799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78017809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7070;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78017877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78018003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5489;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78018012 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9998;RSQ=0.9866;ERATE=0.0003;THETA=0.0018;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78018129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7626;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78018141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78018189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9660;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78018345 . CTCAG C 1629 PASS INDEL;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0173;AVGPOST=0.9968;RSQ=0.9162;ERATE=0.0006;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78018361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8695;ERATE=0.0004;THETA=0.0028;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78018564 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78018581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8649;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78018694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1251;AVGPOST=0.9965;RSQ=0.9876;ERATE=0.0014;THETA=0.0010;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 78018735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4363;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78018917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8745;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78019023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4408;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78019025 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.708;LDAF=0.0081;AVGPOST=0.9952;RSQ=0.7759;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78019078 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.903;BRSQ=0.633;LDAF=0.1792;AVGPOST=0.8747;RSQ=0.6368;ERATE=0.0292;THETA=0.0007;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 78019206 . GTA G 41 PASS INDEL;BAVGPOST=0.990;BRSQ=0.491;LDAF=0.0215;AVGPOST=0.9678;RSQ=0.3857;ERATE=0.0049;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78019232 . TAC T 210 PASS INDEL;BAVGPOST=0.979;BRSQ=0.421;LDAF=0.0369;AVGPOST=0.9470;RSQ=0.3859;ERATE=0.0100;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78019257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.633;LDAF=0.0076;AVGPOST=0.9949;RSQ=0.7458;ERATE=0.0005;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78019263 . A ATATG 1414 PASS INDEL;BAVGPOST=0.958;BRSQ=0.615;LDAF=0.0735;AVGPOST=0.9417;RSQ=0.6673;ERATE=0.0081;THETA=0.0010;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 78019276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7565;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78019584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78019617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.909;LDAF=0.0630;AVGPOST=0.9887;RSQ=0.9320;ERATE=0.0005;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 78019662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1986;AVGPOST=0.9944;RSQ=0.9865;ERATE=0.0005;THETA=0.0022;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 78019719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5513;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78019952 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1237;AVGPOST=0.9987;RSQ=0.9948;ERATE=0.0004;THETA=0.0007;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 78020231 . T TA 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4609;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78020269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4562;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78020325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78020397 . ACT A 316 PASS INDEL;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7119;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78020581 . T TA 116 PASS INDEL;BAVGPOST=0.990;BRSQ=0.504;LDAF=0.0222;AVGPOST=0.9697;RSQ=0.4421;ERATE=0.0063;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78020589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78020608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1236;AVGPOST=0.9986;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 78020805 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78020831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78020899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78021037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78021048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.548;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6280;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78021183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7985;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78021184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4719;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78021195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1232;AVGPOST=0.9975;RSQ=0.9901;ERATE=0.0008;THETA=0.0014;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 78021228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0052;AVGPOST=0.9968;RSQ=0.7399;ERATE=0.0013;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78021256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0045;AVGPOST=0.9957;RSQ=0.6620;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78021405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8559;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78021406 . AAAT A 80 PASS INDEL;BAVGPOST=0.991;BRSQ=0.615;LDAF=0.0203;AVGPOST=0.9773;RSQ=0.5142;ERATE=0.0062;THETA=0.0014;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78021460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78021592 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0329;AVGPOST=0.9984;RSQ=0.9816;ERATE=0.0004;THETA=0.0021;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 78021633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78021657 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0453;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 78021826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9964;RSQ=0.8329;ERATE=0.0007;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78021983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6541;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78022067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8556;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78022244 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9197;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78022418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9248;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78022430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7165;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78022498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9582;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78022576 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0043;AVGPOST=0.9965;RSQ=0.6660;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78022760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1232;AVGPOST=0.9960;RSQ=0.9841;ERATE=0.0006;THETA=0.0005;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 78022782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9773;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78022800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6321;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78022833 . AG A 40707 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9544;AVGPOST=0.9951;RSQ=0.9619;ERATE=0.0004;THETA=0.0006;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 78022980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7116;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78023059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.548;LDAF=0.0120;AVGPOST=0.9891;RSQ=0.6587;ERATE=0.0066;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78023336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0197;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78023390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78023469 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78023607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78023798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0143;AVGPOST=0.9984;RSQ=0.9572;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78023802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1237;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0009;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 78023819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5732;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78023852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6091;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78024007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0152;AVGPOST=0.9984;RSQ=0.9566;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78024241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78024351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78024429 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9272;AVGPOST=0.9977;RSQ=0.9897;ERATE=0.0003;THETA=0.0006;AC=2025;AN=2184 GT:DS:GL:BD 0.92719781 1
1 78024491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9534;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78024568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78024797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3669;AVGPOST=0.9963;RSQ=0.9940;ERATE=0.0004;THETA=0.0004;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 78024855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78025010 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6039;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7740;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78025307 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6379;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78025360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025516 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6762;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78025538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78025763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78025767 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78025801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9684;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78025841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78026095 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78026097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9236;AVGPOST=0.9985;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=2017;AN=2184 GT:DS:GL:BD 0.92353481 1
1 78026110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7936;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78026124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8530;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78026205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5852;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78026366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8979;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78026424 . CAG C 478 PASS INDEL;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8621;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78026450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4791;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78026490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9502;ERATE=0.0003;THETA=0.0021;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78026491 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78026544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4182;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78026597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.879;LDAF=0.0491;AVGPOST=0.9920;RSQ=0.9403;ERATE=0.0004;THETA=0.0004;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 78026979 rs72297391 C CACT 87 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0037;AVGPOST=0.9967;RSQ=0.6051;ERATE=0.0009;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78027137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7803;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78027145 . GT G 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0046;AVGPOST=0.9959;RSQ=0.6832;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78027531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78027595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78027674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0034;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78027692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4626;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78028177 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0909;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 78028197 . C CA 2105 PASS INDEL;BAVGPOST=0.958;BRSQ=0.581;LDAF=0.0676;AVGPOST=0.9472;RSQ=0.6565;ERATE=0.0117;THETA=0.0006;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 78028271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8876;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78028572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78028594 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0171;AVGPOST=0.9972;RSQ=0.9345;ERATE=0.0007;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78028597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0032;AVGPOST=0.9959;RSQ=0.5180;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78028786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0913;AVGPOST=0.9979;RSQ=0.9894;ERATE=0.0006;THETA=0.0004;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 78028864 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7661;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78028920 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78028936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6629;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78028945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.341;LDAF=0.0042;AVGPOST=0.9964;RSQ=0.6366;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78028981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0162;AVGPOST=0.9982;RSQ=0.9570;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78029082 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.4117;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78029083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.6589;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78029113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5030;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78029127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8295;AVGPOST=0.9946;RSQ=0.9855;ERATE=0.0004;THETA=0.0013;AC=1812;AN=2184 GT:DS:GL:BD 0.82967031 1
1 78029182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0049;AVGPOST=0.9968;RSQ=0.7461;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78029342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1417;AVGPOST=0.9869;RSQ=0.9602;ERATE=0.0004;THETA=0.0002;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 78029467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8264;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78029562 . CATAA C 1495 PASS INDEL;BAVGPOST=0.970;BRSQ=0.817;LDAF=0.0670;AVGPOST=0.9850;RSQ=0.9174;ERATE=0.0006;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 78029591 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.771;LDAF=0.1407;AVGPOST=0.8992;RSQ=0.6734;ERATE=0.0199;THETA=0.0004;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 78029602 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.616;LDAF=0.0774;AVGPOST=0.9260;RSQ=0.6025;ERATE=0.0114;THETA=0.0006;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 78029609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0190;AVGPOST=0.9952;RSQ=0.8890;ERATE=0.0009;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78029758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78029967 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6710;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78029988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78030024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78030142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6543;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78030285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3951;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 78030447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78030532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8292;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78030547 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78030648 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7577;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78030758 . G GT 72 PASS INDEL;BAVGPOST=0.995;BRSQ=0.607;LDAF=0.0085;AVGPOST=0.9892;RSQ=0.4719;ERATE=0.0045;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78030946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.8099;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78031471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78031570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8781;ERATE=0.0010;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78031579 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78031592 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9311;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78031617 . AT A 193 PASS INDEL;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6343;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78031641 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0478;AVGPOST=0.9991;RSQ=0.9921;ERATE=0.0002;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78031685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7961;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78031733 . GGAGC G 829 PASS INDEL;BAVGPOST=0.996;BRSQ=0.787;LDAF=0.0090;AVGPOST=0.9972;RSQ=0.8846;ERATE=0.0004;THETA=0.0017;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78031806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.2774;ERATE=0.0004;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78031827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78031886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1907;AVGPOST=0.9972;RSQ=0.9929;ERATE=0.0003;THETA=0.0006;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 78031897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7196;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78031917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.894;LDAF=0.0591;AVGPOST=0.9848;RSQ=0.9114;ERATE=0.0004;THETA=0.0008;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 78031930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3748;AVGPOST=0.9968;RSQ=0.9957;ERATE=0.0005;THETA=0.0030;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 78032216 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4585;ERATE=0.0004;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78032272 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.870;LDAF=0.0328;AVGPOST=0.9898;RSQ=0.8878;ERATE=0.0003;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 78032417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3180;AVGPOST=0.9948;RSQ=0.9922;ERATE=0.0003;THETA=0.0019;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 78032561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9588;ERATE=0.0002;THETA=0.0060;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78032751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9124;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78032884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5089;AVGPOST=0.9944;RSQ=0.9920;ERATE=0.0004;THETA=0.0022;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 78032959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0162;AVGPOST=0.9969;RSQ=0.9155;ERATE=0.0002;THETA=0.0026;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78033000 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.0915;AVGPOST=0.9949;RSQ=0.9790;ERATE=0.0011;THETA=0.0027;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 78033078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78033102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6596;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78033330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78033346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8446;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78033389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.961;LDAF=0.1231;AVGPOST=0.9906;RSQ=0.9691;ERATE=0.0003;THETA=0.0062;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 78033407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78033467 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0123;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78033604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.0946;AVGPOST=0.9960;RSQ=0.9860;ERATE=0.0005;THETA=0.0022;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 78033626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.988;LDAF=0.3859;AVGPOST=0.9889;RSQ=0.9850;ERATE=0.0005;THETA=0.0073;AC=840;AN=2184 GT:DS:GL:BD 0.38461539 0
1 78033708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9691;ERATE=0.0002;THETA=0.0051;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78033716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78033717 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8685;ERATE=0.0003;THETA=0.0065;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78033768 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8921;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78033769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7375;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78033774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9154;ERATE=0.0003;THETA=0.0040;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78033857 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0077;AVGPOST=0.9996;RSQ=0.9762;ERATE=0.0002;THETA=0.0126;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78033907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0079;AVGPOST=0.9994;RSQ=0.9650;ERATE=0.0003;THETA=0.0111;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78033908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7924;ERATE=0.0005;THETA=0.0113;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78034092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.982;LDAF=0.3625;AVGPOST=0.9854;RSQ=0.9783;ERATE=0.0043;THETA=0.0007;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 78034176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.961;LDAF=0.2247;AVGPOST=0.9818;RSQ=0.9635;ERATE=0.0011;THETA=0.0165;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 78034200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3469;AVGPOST=0.9869;RSQ=0.9787;ERATE=0.0011;THETA=0.0027;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 78034262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7830;ERATE=0.0003;THETA=0.0091;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78034276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9910;ERATE=0.0002;THETA=0.0069;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78034332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78034337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9870;ERATE=0.0002;THETA=0.0049;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78034345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0054;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78034373 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7469;ERATE=0.0017;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78034411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0314;AVGPOST=0.9979;RSQ=0.9748;ERATE=0.0003;THETA=0.0030;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78034436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0155;AVGPOST=0.9981;RSQ=0.9565;ERATE=0.0003;THETA=0.0055;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78034437 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7079;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78034504 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9603;ERATE=0.0002;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78034525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0216;AVGPOST=0.9981;RSQ=0.9731;ERATE=0.0003;THETA=0.0020;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78034530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78034558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.974;LDAF=0.1814;AVGPOST=0.9884;RSQ=0.9741;ERATE=0.0013;THETA=0.0056;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 78034582 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78034584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78034594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.961;LDAF=0.5369;AVGPOST=0.9761;RSQ=0.9666;ERATE=0.0007;THETA=0.0191;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 78034606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.974;LDAF=0.1841;AVGPOST=0.9864;RSQ=0.9684;ERATE=0.0006;THETA=0.0051;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 78034723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8834;ERATE=0.0004;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78034768 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0002;THETA=0.0064;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78034828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0381;AVGPOST=0.9985;RSQ=0.9850;ERATE=0.0002;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 78034839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9424;ERATE=0.0003;THETA=0.0055;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78034858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.977;LDAF=0.5321;AVGPOST=0.9828;RSQ=0.9760;ERATE=0.0024;THETA=0.0111;AC=1163;AN=2184 GT:DS:GL:BD 0.53250915 1
1 78034910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8849;ERATE=0.0003;THETA=0.0079;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78035015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0002;THETA=0.0112;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78035024 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9052;ERATE=0.0003;THETA=0.0110;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78035141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.934;LDAF=0.8896;AVGPOST=0.9765;RSQ=0.9205;ERATE=0.0013;THETA=0.0007;AC=1948;AN=2184 GT:DS:GL:BD 0.89194137 1
1 78035215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0005;THETA=0.0145;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78035232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7967;ERATE=0.0003;THETA=0.0084;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78035277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78035388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9507;ERATE=0.0003;THETA=0.0025;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78035627 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78035650 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8174;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78035696 . C CA 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5176;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78035792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5012;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78035911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7328;ERATE=0.0015;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78035929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8351;ERATE=0.0002;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78035935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.5450;ERATE=0.0006;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78035958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.4385;AVGPOST=0.9875;RSQ=0.9824;ERATE=0.0015;THETA=0.0007;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 78036020 . T TCCTTGA 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.4089;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78036025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78036158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4390;AVGPOST=0.9936;RSQ=0.9910;ERATE=0.0005;THETA=0.0005;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 78036173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0139;AVGPOST=0.9991;RSQ=0.9721;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78036174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6671;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78036227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7514;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78036271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78036327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78036375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78036395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4561;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0004;THETA=0.0007;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 78036437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6925;ERATE=0.0005;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78036438 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78036484 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4466;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78036555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8475;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78036568 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0586;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0004;THETA=0.0010;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 78036624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78036730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0039;AVGPOST=0.9988;RSQ=0.8838;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78036740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0038;AVGPOST=0.9981;RSQ=0.8134;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78036747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8726;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78036778 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78036781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.7934;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78036844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1308;AVGPOST=0.9987;RSQ=0.9952;ERATE=0.0004;THETA=0.0027;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 78036947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1395;AVGPOST=0.9947;RSQ=0.9847;ERATE=0.0008;THETA=0.0007;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 78037130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.3806;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78037172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4641;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78037189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2179;AVGPOST=0.9959;RSQ=0.9916;ERATE=0.0006;THETA=0.0011;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 78037211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78037247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0039;AVGPOST=0.9968;RSQ=0.6574;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78037270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.970;LDAF=0.2177;AVGPOST=0.9929;RSQ=0.9853;ERATE=0.0006;THETA=0.0061;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 78037284 . TA T 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4643;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78037338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5628;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78037424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7927;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78037496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2173;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0041;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 78037586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5924;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78037831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4233;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78037858 . GCAT G 476 PASS INDEL;BAVGPOST=0.995;BRSQ=0.674;LDAF=0.0105;AVGPOST=0.9956;RSQ=0.8426;ERATE=0.0007;THETA=0.0020;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78037860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78037954 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0390;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 78038053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.757;LDAF=0.0056;AVGPOST=0.9976;RSQ=0.8194;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78038130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4379;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78038171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0723;AVGPOST=0.9979;RSQ=0.9888;ERATE=0.0004;THETA=0.0014;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 78038265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0372;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0018;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78038270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1797;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0006;THETA=0.0011;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 78038400 . AC A 536 PASS INDEL;BAVGPOST=0.931;BRSQ=0.562;LDAF=0.0833;AVGPOST=0.9438;RSQ=0.7500;ERATE=0.0047;THETA=0.0007;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 78038521 . CA C 10043 PASS INDEL;BAVGPOST=0.989;BRSQ=0.967;LDAF=0.1732;AVGPOST=0.9908;RSQ=0.9796;ERATE=0.0009;THETA=0.0010;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 78038522 . C CA 9005 PASS INDEL;BAVGPOST=0.955;BRSQ=0.878;LDAF=0.2249;AVGPOST=0.9063;RSQ=0.7992;ERATE=0.0225;THETA=0.0007;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 78038535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1410;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0004;THETA=0.0013;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 78038604 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78038640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0244;AVGPOST=0.9995;RSQ=0.9913;ERATE=0.0003;THETA=0.0016;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78038727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0390;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0011;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 78038842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.495;LDAF=0.0083;AVGPOST=0.9920;RSQ=0.6509;ERATE=0.0010;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78038860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1735;AVGPOST=0.9949;RSQ=0.9869;ERATE=0.0009;THETA=0.0008;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 78038916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.511;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5695;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78039051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7721;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78039130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1735;AVGPOST=0.9933;RSQ=0.9831;ERATE=0.0010;THETA=0.0004;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 78039157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.493;LDAF=0.0207;AVGPOST=0.9757;RSQ=0.5157;ERATE=0.0047;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78039162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.967;LDAF=0.7239;AVGPOST=0.9812;RSQ=0.9703;ERATE=0.0024;THETA=0.0008;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 78039272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8165;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78039287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78039327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78039474 . GTGTC G 45287 PASS INDEL;BAVGPOST=0.926;BRSQ=0.558;LDAF=0.8689;AVGPOST=0.8770;RSQ=0.5571;ERATE=0.0281;THETA=0.0011;AC=1986;AN=2184 GT:DS:GL:BD 0.90934068 1
1 78039619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1730;AVGPOST=0.9971;RSQ=0.9919;ERATE=0.0006;THETA=0.0011;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 78039699 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0098;AVGPOST=0.9983;RSQ=0.9322;ERATE=0.0003;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78039761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1723;AVGPOST=0.9973;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 78039810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6843;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78039881 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78040008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8830;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78040077 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8444;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78040109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.4162;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78040118 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7928;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78040141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7815;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78040189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78040209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0076;AVGPOST=0.9985;RSQ=0.9255;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78040217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5908;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78040218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8393;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78040276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78040315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0003;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78040386 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0124;AVGPOST=0.9980;RSQ=0.9436;ERATE=0.0004;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78040632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78040695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0373;AVGPOST=0.9993;RSQ=0.9922;ERATE=0.0003;THETA=0.0016;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78040756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9022;ERATE=0.0003;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78040880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7285;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0003;THETA=0.0007;AC=1593;AN=2184 GT:DS:GL:BD 0.72939563 1
1 78040981 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78040989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8449;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78040993 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7567;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78041098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.591;LDAF=0.0159;AVGPOST=0.9819;RSQ=0.5626;ERATE=0.0062;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78041248 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.6987;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78041254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.761;LDAF=0.8214;AVGPOST=0.8963;RSQ=0.7300;ERATE=0.0231;THETA=0.0008;AC=1861;AN=2184 GT:DS:GL:BD 0.85210621 1
1 78041276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.804;LDAF=0.0106;AVGPOST=0.9973;RSQ=0.8981;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78041563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=0.9980;RSQ=0.9797;ERATE=0.0004;THETA=0.0016;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 78041569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0231;AVGPOST=0.9988;RSQ=0.9778;ERATE=0.0005;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78041593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7162;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78041691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8663;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78041702 . C CT 1008 PASS INDEL;BAVGPOST=0.466;BRSQ=0.102;LDAF=0.5931;AVGPOST=0.6310;RSQ=0.3438;ERATE=0.0262;THETA=0.0016;AC=1352;AN=2184 GT:DS:GL:BD 0.61904764 1
1 78041725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0171;AVGPOST=0.9903;RSQ=0.7721;ERATE=0.0010;THETA=0.0013;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78041796 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0032;AVGPOST=0.9951;RSQ=0.4093;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78041940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5430;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78041992 . GGT G 191 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78042000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0061;AVGPOST=0.9976;RSQ=0.8356;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78042073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78042349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78042354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7439;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78042396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0072;AVGPOST=0.9985;RSQ=0.9203;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78042544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78042581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0054;AVGPOST=0.9981;RSQ=0.8629;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78042649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9522;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78042712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.6140;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78042829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.6384;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78042901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9624;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78042957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78043031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78043060 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78043269 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78043303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78043351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78043475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78043539 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78043604 . CT C 47 PASS INDEL;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4934;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78043611 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78043651 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78043944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78043973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78044002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1266;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0009;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 78044119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78044214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.5676;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78044254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0113;AVGPOST=0.9995;RSQ=0.9795;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78044392 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.575;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8101;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78044515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0064;AVGPOST=0.9970;RSQ=0.8177;ERATE=0.0006;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78044677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1741;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0007;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 78044773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9498;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78044897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0114;AVGPOST=0.9992;RSQ=0.9721;ERATE=0.0003;THETA=0.0013;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78044952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0114;AVGPOST=0.9993;RSQ=0.9743;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78045080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0132;AVGPOST=0.9961;RSQ=0.8661;ERATE=0.0008;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78045349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0193;AVGPOST=0.9942;RSQ=0.8817;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78045420 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78045434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9786;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78045623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9255;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78045674 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78045788 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1632;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0008;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 78045928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78045930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78045957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78045996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78046002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78046031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78046076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0059;AVGPOST=0.9969;RSQ=0.7868;ERATE=0.0007;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78046349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.966;LDAF=0.1268;AVGPOST=0.9963;RSQ=0.9875;ERATE=0.0004;THETA=0.0006;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 78046363 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.969;LDAF=0.1711;AVGPOST=0.9966;RSQ=0.9915;ERATE=0.0003;THETA=0.0005;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 78046371 . AAAG A 1638 PASS INDEL;BAVGPOST=0.990;BRSQ=0.698;LDAF=0.0201;AVGPOST=0.9867;RSQ=0.7506;ERATE=0.0008;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78046402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78046445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1679;AVGPOST=0.9970;RSQ=0.9914;ERATE=0.0005;THETA=0.0006;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 78047082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0303;AVGPOST=0.9977;RSQ=0.9706;ERATE=0.0003;THETA=0.0009;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 78047285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.965;LDAF=0.1699;AVGPOST=0.9938;RSQ=0.9833;ERATE=0.0008;THETA=0.0007;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 78047451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8188;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78047809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5073;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78047822 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0565;AVGPOST=0.9988;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 78047865 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5050;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78047872 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.7941;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78047904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.787;LDAF=0.1462;AVGPOST=0.9519;RSQ=0.8628;ERATE=0.0024;THETA=0.0003;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 78047968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1682;AVGPOST=0.9966;RSQ=0.9900;ERATE=0.0006;THETA=0.0022;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 78048191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0144;AVGPOST=0.9986;RSQ=0.9617;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78048430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9585;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78048489 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5006;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78048681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78048738 . TG T 776 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8532;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78048855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9498;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78048867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0198;AVGPOST=0.9994;RSQ=0.9866;ERATE=0.0003;THETA=0.0015;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78048881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78048908 rs61083360 CAT C 7119 PASS INDEL;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0509;AVGPOST=0.9966;RSQ=0.9751;ERATE=0.0005;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 78048966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9871;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78048968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78048976 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0199;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0004;THETA=0.0044;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78049167 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7558;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78049216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78049365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78049548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6458;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78049587 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7648;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78049593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0006;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78049616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78049798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0093;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78049820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78049824 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78050101 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8085;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78050143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78050149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1806;AVGPOST=0.9969;RSQ=0.9920;ERATE=0.0005;THETA=0.0020;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 78050182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7181;ERATE=0.0004;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78050216 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78050285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78050375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78050393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78050418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0149;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78050460 . G GC 35 PASS INDEL;BAVGPOST=0.991;BRSQ=0.395;LDAF=0.0076;AVGPOST=0.9921;RSQ=0.5939;ERATE=0.0007;THETA=0.0074;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78050642 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78050716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8153;AVGPOST=0.9982;RSQ=0.9953;ERATE=0.0060;THETA=0.0008;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 78050728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0099;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78050786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78050935 rs34749979 C CAAAG 78052 PASS INDEL;BAVGPOST=0.955;BRSQ=0.932;LDAF=0.5411;AVGPOST=0.9700;RSQ=0.9609;ERATE=0.0005;THETA=0.0006;AC=1189;AN=2184 GT:DS:GL:BD 0.54441392 1
1 78050999 . A AAGAC 28725 PASS INDEL;BAVGPOST=0.953;BRSQ=0.924;LDAF=0.5130;AVGPOST=0.9308;RSQ=0.9090;ERATE=0.0096;THETA=0.0006;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 78051001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0095;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78051049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.969;LDAF=0.5496;AVGPOST=0.9718;RSQ=0.9598;ERATE=0.0054;THETA=0.0037;AC=1204;AN=2184 GT:DS:GL:BD 0.55128205 1
1 78051186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8132;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78051188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0094;AVGPOST=0.9966;RSQ=0.8543;ERATE=0.0004;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78051309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0048;AVGPOST=0.9959;RSQ=0.6539;ERATE=0.0027;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78051310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8933;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78051332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0109;AVGPOST=0.9984;RSQ=0.9457;ERATE=0.0004;THETA=0.0054;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78051334 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5558;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78051385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8357;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78051406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78051425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7243;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78051463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78051473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4793;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78051479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0160;AVGPOST=0.9976;RSQ=0.9457;ERATE=0.0003;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78051596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5580;AVGPOST=0.9971;RSQ=0.9956;ERATE=0.0005;THETA=0.0016;AC=1219;AN=2184 GT:DS:GL:BD 0.55815017 1
1 78051647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78051729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8799;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78051794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.1309;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78051852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6079;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78051881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9977;RSQ=0.8377;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78051990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.9844;AVGPOST=0.9973;RSQ=0.9230;ERATE=0.0009;THETA=0.0003;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 78052018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78052181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1293;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0004;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 78052216 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7446;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78052266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3035;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0005;THETA=0.0005;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 78052286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0077;AVGPOST=0.9994;RSQ=0.9706;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78052397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3936;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 78052413 . ATG A 1032 PASS INDEL;BAVGPOST=0.963;BRSQ=0.726;LDAF=0.0933;AVGPOST=0.9271;RSQ=0.6184;ERATE=0.0441;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 78052422 rs36017555 CAT C 44266 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3753;AVGPOST=0.9961;RSQ=0.9925;ERATE=0.0011;THETA=0.0004;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 78052446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6331;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0007;THETA=0.0002;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 78052595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78052700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6332;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0008;THETA=0.0004;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 78052848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6335;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 78052950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6276;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0008;AC=1371;AN=2184 GT:DS:GL:BD 0.62774724 1
1 78052953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1293;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 78053183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78053376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5142;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053406 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053433 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6995;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78053604 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8496;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78053656 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9210;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78053755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7181;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78053887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0990;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 78053915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9474;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78053933 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78053977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7914;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78054154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6674;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78054157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3875;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 78054202 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5898;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78054310 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9474;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=2069;AN=2184 GT:DS:GL:BD 0.94734430 1
1 78054316 rs71703394 CAA C 370 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78054419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78054570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0203;AVGPOST=0.9976;RSQ=0.9570;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78054652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78054710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1098;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 78054880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3862;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 78054912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78054939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0101;AVGPOST=0.9992;RSQ=0.9634;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78054940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7280;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78054973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5213;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 78054974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78054983 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78054988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0167;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78055062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7826;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78055077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7284;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78055171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5607;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78055223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7666;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78055236 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1023;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 78055295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5248;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0029;AC=1146;AN=2184 GT:DS:GL:BD 0.52472526 1
1 78055330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6007;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78055500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8051;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78055569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78055750 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6526;ERATE=0.0014;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78055881 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9228;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78055911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6451;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0006;THETA=0.0003;AC=1409;AN=2184 GT:DS:GL:BD 0.64514655 1
1 78055916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4830;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056091 . GC G 757 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9185;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78056122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6368;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9786;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78056216 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4202;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0006;THETA=0.0002;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 78056285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8972;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78056398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9058;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78056494 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9802;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78056554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3796;AVGPOST=0.9945;RSQ=0.9903;ERATE=0.0019;THETA=0.0003;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 78056590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6204;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1172;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0004;THETA=0.0007;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 78056737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7348;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056830 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78056899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0089;AVGPOST=0.9986;RSQ=0.9369;ERATE=0.0011;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78057082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78057085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78057088 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7380;ERATE=0.0012;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78057098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6946;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78057474 . T TA 444 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8176;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78057486 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78057549 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78057590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78057696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0784;AVGPOST=0.9987;RSQ=0.9929;ERATE=0.0003;THETA=0.0011;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 78057735 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7148;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78057792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0034;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78057952 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8131;ERATE=0.0008;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78057986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0166;AVGPOST=0.9991;RSQ=0.9774;ERATE=0.0003;THETA=0.0011;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78058022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4968;AVGPOST=0.9957;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 78058068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7117;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78058273 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0101;AVGPOST=0.9987;RSQ=0.9472;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78058278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4661;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78058283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0032;AVGPOST=0.9965;RSQ=0.6023;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78058303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6800;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78058338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0082;AVGPOST=0.9985;RSQ=0.9207;ERATE=0.0007;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78058412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0039;AVGPOST=0.9956;RSQ=0.6003;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78058476 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78058559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9602;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78058769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0182;AVGPOST=0.9996;RSQ=0.9914;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78058851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2053;AVGPOST=0.9955;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 78058967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78059057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3031;AVGPOST=0.9938;RSQ=0.9912;ERATE=0.0009;THETA=0.0005;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 78059097 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.6940;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78059126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.550;LDAF=0.0048;AVGPOST=0.9971;RSQ=0.7265;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78059153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0769;AVGPOST=0.9968;RSQ=0.9849;ERATE=0.0003;THETA=0.0006;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 78059154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8797;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78059174 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9478;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78059250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0605;AVGPOST=0.9958;RSQ=0.9692;ERATE=0.0006;THETA=0.0012;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 78059349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9516;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78059350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.5847;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78059523 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6488;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78059531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4774;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78059582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78059583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9148;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78059622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0098;AVGPOST=0.9968;RSQ=0.8726;ERATE=0.0005;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78059654 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5596;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78059735 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6086;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78059834 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8123;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78059879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.3998;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78059959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7853;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78059968 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8042;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78060109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0123;AVGPOST=0.9990;RSQ=0.9664;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78060227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78060299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78060310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78060360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78060413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0051;AVGPOST=0.9976;RSQ=0.8106;ERATE=0.0007;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78060430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78060466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9642;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78060475 . TTG T 359 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9682;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78060598 . GTT G 1740 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9776;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78060600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.638;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6323;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78060656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5208;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78060662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0799;AVGPOST=0.9945;RSQ=0.9743;ERATE=0.0004;THETA=0.0027;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 78060825 rs113702693 ATCC A 5173 PASS INDEL;BAVGPOST=0.919;BRSQ=0.748;LDAF=0.1837;AVGPOST=0.9522;RSQ=0.8921;ERATE=0.0019;THETA=0.0003;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 78060830 rs78721261 CCTG C 930 PASS INDEL;BAVGPOST=0.906;BRSQ=0.699;LDAF=0.1939;AVGPOST=0.8681;RSQ=0.7145;ERATE=0.0067;THETA=0.0011;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 78060835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0521;AVGPOST=0.9952;RSQ=0.9650;ERATE=0.0007;THETA=0.0009;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 78060887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0824;AVGPOST=0.9927;RSQ=0.9629;ERATE=0.0007;THETA=0.0018;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 78060959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0071;AVGPOST=0.9935;RSQ=0.6839;ERATE=0.0007;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78061085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.841;LDAF=0.0174;AVGPOST=0.9982;RSQ=0.9562;ERATE=0.0005;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78061176 . G GA 428 PASS INDEL;BAVGPOST=0.940;BRSQ=0.454;LDAF=0.1047;AVGPOST=0.8796;RSQ=0.4735;ERATE=0.0222;THETA=0.0006;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 78061196 . TTAGC T 892 PASS INDEL;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0122;AVGPOST=0.9969;RSQ=0.9097;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78061216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9635;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78061352 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4691;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78061445 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6851;ERATE=0.0003;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78061461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7042;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78061505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9638;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78061562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.4809;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78061889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0612;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0015;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78062292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0068;AVGPOST=0.9983;RSQ=0.8997;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78062373 . CAT C 2558 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0142;AVGPOST=0.9992;RSQ=0.9793;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78062439 . AAGAG A 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5932;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78062538 . A AAG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0032;AVGPOST=0.9957;RSQ=0.4798;ERATE=0.0007;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78062554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78062624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0444;AVGPOST=0.9980;RSQ=0.9815;ERATE=0.0004;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 78062675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.756;LDAF=0.0128;AVGPOST=0.9915;RSQ=0.7545;ERATE=0.0007;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78062678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5488;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78062716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0428;AVGPOST=0.9974;RSQ=0.9768;ERATE=0.0005;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 78062723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5779;ERATE=0.0009;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78062730 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6875;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78062861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7559;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78063019 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0052;AVGPOST=0.9948;RSQ=0.6167;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78063077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78063096 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7376;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78063249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0056;AVGPOST=0.9978;RSQ=0.8229;ERATE=0.0004;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78063327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8015;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78063350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8844;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78063763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78063782 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9675;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78063801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0193;AVGPOST=0.9989;RSQ=0.9795;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78063837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78063852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8539;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78063954 . A AT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78063971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9501;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78063988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0367;AVGPOST=0.9986;RSQ=0.9837;ERATE=0.0003;THETA=0.0019;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 78063991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8371;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78064003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9289;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78064019 . A ATC 1528 PASS INDEL;BAVGPOST=0.996;BRSQ=0.874;LDAF=0.0107;AVGPOST=0.9977;RSQ=0.9316;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78064116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9370;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78064145 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0112;AVGPOST=0.9970;RSQ=0.8915;ERATE=0.0003;THETA=0.0082;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78064152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1531;AVGPOST=0.9949;RSQ=0.9847;ERATE=0.0005;THETA=0.0007;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 78064223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78064304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0547;AVGPOST=0.9991;RSQ=0.9941;ERATE=0.0003;THETA=0.0010;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 78064410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8340;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78064450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0383;AVGPOST=0.9990;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 78064591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78064648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78064664 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78064897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78064973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9630;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78065120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78065165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7782;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78065231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7662;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78065241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0159;AVGPOST=0.9984;RSQ=0.9553;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78065257 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.474;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.6808;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78065266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8454;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78065310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0050;AVGPOST=0.9966;RSQ=0.7434;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78065491 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78065547 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.7201;AVGPOST=0.9879;RSQ=0.9765;ERATE=0.0006;THETA=0.0006;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 78065562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.580;LDAF=0.0030;AVGPOST=0.9952;RSQ=0.4281;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78065642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.739;LDAF=0.0144;AVGPOST=0.9930;RSQ=0.8311;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78065651 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4291;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78065707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7534;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78065729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0064;AVGPOST=0.9952;RSQ=0.7349;ERATE=0.0004;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78065743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0101;AVGPOST=0.9970;RSQ=0.8772;ERATE=0.0003;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78065835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0103;AVGPOST=0.9974;RSQ=0.8995;ERATE=0.0005;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78065843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3834;AVGPOST=0.9945;RSQ=0.9917;ERATE=0.0005;THETA=0.0004;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 78065876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0293;AVGPOST=0.9969;RSQ=0.9629;ERATE=0.0005;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78066006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0551;AVGPOST=0.9994;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 78066159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8096;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78066169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7118;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78066362 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8475;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78066363 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78066385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0067;AVGPOST=0.9967;RSQ=0.8218;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78066409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8268;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78066644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0702;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 78066710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0152;AVGPOST=0.9987;RSQ=0.9686;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78066848 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7414;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78066850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.967;LDAF=0.0635;AVGPOST=0.9964;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 78067023 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0184;AVGPOST=0.9968;RSQ=0.9269;ERATE=0.0005;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78067048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8726;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78067112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9833;AVGPOST=0.9991;RSQ=0.9760;ERATE=0.0004;THETA=0.0004;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 78067222 . G GT 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4030;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0048;AVGPOST=0.9954;RSQ=0.6428;ERATE=0.0009;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78067359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8500;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78067364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5858;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78067381 . CA C 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5270;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78067474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9593;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78067491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9826;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78067749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78067865 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5184;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78067946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6878;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78068074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.4038;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78068221 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2410;AVGPOST=0.9957;RSQ=0.9908;ERATE=0.0005;THETA=0.0005;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 78068253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6233;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78068266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9723;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78068503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78068563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78068660 . TCTTA T 34888 PASS INDEL;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2397;AVGPOST=0.9971;RSQ=0.9934;ERATE=0.0007;THETA=0.0004;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 78068697 rs71573752 G GT 2647 PASS INDEL;BAVGPOST=0.992;BRSQ=0.917;LDAF=0.0489;AVGPOST=0.9913;RSQ=0.9271;ERATE=0.0013;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 78068739 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78068740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9413;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78068785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8851;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78068803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4461;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=975;AN=2184 GT:DS:GL:BD 0.44642857 0
1 78068902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78068946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78068997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0002;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 78069006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78069096 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.957;LDAF=0.0280;AVGPOST=0.9964;RSQ=0.9456;ERATE=0.0004;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78069114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5097;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78069223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0447;AVGPOST=0.9990;RSQ=0.9901;ERATE=0.0003;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 78069251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9214;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78069252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78069276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0081;AVGPOST=0.9973;RSQ=0.8706;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78069344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8951;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78069533 . A AC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5806;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78069654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2426;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 78069655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7755;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78069736 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3996;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78069757 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78070103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78070121 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9646;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78070390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.8752;AVGPOST=0.9943;RSQ=0.9812;ERATE=0.0004;THETA=0.0002;AC=1910;AN=2184 GT:DS:GL:BD 0.87454212 1
1 78070410 rs67615166 A AG 746 PASS INDEL;BAVGPOST=0.960;BRSQ=0.718;LDAF=0.1031;AVGPOST=0.8928;RSQ=0.5394;ERATE=0.0187;THETA=0.0006;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 78070641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8230;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78070645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78070649 . C CA 635 PASS INDEL;BAVGPOST=0.923;BRSQ=0.478;LDAF=0.1441;AVGPOST=0.8339;RSQ=0.4266;ERATE=0.0417;THETA=0.0006;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 78070876 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8186;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78071042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.525;LDAF=0.0148;AVGPOST=0.9810;RSQ=0.5163;ERATE=0.0019;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78071071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.603;LDAF=0.0065;AVGPOST=0.9935;RSQ=0.6125;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78071130 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4262;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78071161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0445;AVGPOST=0.9983;RSQ=0.9838;ERATE=0.0005;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 78071195 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0184;AVGPOST=0.9974;RSQ=0.9406;ERATE=0.0005;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78071203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7419;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78071238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8441;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78071290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6425;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78071299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78071356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0262;AVGPOST=0.9986;RSQ=0.9751;ERATE=0.0006;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78071375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78071469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9668;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78071490 . CCAT C 49 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5610;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78071494 . TGAC T 432 PASS INDEL;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6297;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78071497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78071512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2386;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 78071783 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78071878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5164;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 78071883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7804;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78071903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78072304 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.797;LDAF=0.0080;AVGPOST=0.9957;RSQ=0.8027;ERATE=0.0006;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78072338 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8652;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78072349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8138;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78072433 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9973;RSQ=0.8779;ERATE=0.0005;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78072521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8591;ERATE=0.0004;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78072733 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.975;LDAF=0.0646;AVGPOST=0.9904;RSQ=0.9407;ERATE=0.0006;THETA=0.0009;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78072791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4078;ERATE=0.0004;THETA=0.0083;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78072825 rs77727338 TAAA T 5682 PASS INDEL;BAVGPOST=0.970;BRSQ=0.777;LDAF=0.0768;AVGPOST=0.9865;RSQ=0.9319;ERATE=0.0006;THETA=0.0035;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 78072852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4734;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78072972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4768;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0090;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0092;AVGPOST=0.9979;RSQ=0.9049;ERATE=0.0017;THETA=0.0039;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78073101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0355;AVGPOST=0.9990;RSQ=0.9907;ERATE=0.0003;THETA=0.0036;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 78073133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073408 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6612;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6786;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073570 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78073651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0045;AVGPOST=0.9976;RSQ=0.7913;ERATE=0.0009;THETA=0.0110;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78073688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8804;ERATE=0.0003;THETA=0.0050;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78073689 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0096;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78073718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5597;ERATE=0.0003;THETA=0.0086;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78073810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.6724;AVGPOST=0.9873;RSQ=0.9814;ERATE=0.0004;THETA=0.0038;AC=1470;AN=2184 GT:DS:GL:BD 0.67307693 1
1 78073934 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.843;LDAF=0.0060;AVGPOST=0.9978;RSQ=0.8531;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78073960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78074013 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2611;AVGPOST=0.9917;RSQ=0.9851;ERATE=0.0008;THETA=0.0005;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 78074032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4825;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78074037 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78074141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0185;AVGPOST=0.9996;RSQ=0.9907;ERATE=0.0004;THETA=0.0056;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78074160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5310;AVGPOST=0.9980;RSQ=0.9972;ERATE=0.0004;THETA=0.0023;AC=1160;AN=2184 GT:DS:GL:BD 0.53113556 1
1 78074179 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78074233 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78074369 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5211;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=1139;AN=2184 GT:DS:GL:BD 0.52152014 1
1 78074523 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.972;LDAF=0.5079;AVGPOST=0.9759;RSQ=0.9681;ERATE=0.0085;THETA=0.0003;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 78074581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5208;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=1138;AN=2184 GT:DS:GL:BD 0.52106225 1
1 78074615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4592;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78074623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4986;AVGPOST=0.9963;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 78074732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.1463;AVGPOST=0.9953;RSQ=0.9865;ERATE=0.0005;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 78074886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0072;AVGPOST=0.9980;RSQ=0.8887;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78074887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78074916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0798;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 78074917 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5004;AVGPOST=0.9996;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 78074952 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5002;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0004;THETA=0.0003;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 78075024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0012;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 78075058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5004;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 78075113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4986;AVGPOST=0.9969;RSQ=0.9958;ERATE=0.0005;THETA=0.0004;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 78075152 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4992;AVGPOST=0.9959;RSQ=0.9942;ERATE=0.0008;THETA=0.0021;AC=1089;AN=2184 GT:DS:GL:BD 0.49862638 0
1 78075207 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0365;AVGPOST=0.9957;RSQ=0.9618;ERATE=0.0004;THETA=0.0002;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78075227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.9889;AVGPOST=0.9931;RSQ=0.7459;ERATE=0.0010;THETA=0.0012;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 78075267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6967;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78075286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9305;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78075497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7052;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78075605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78075669 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78075679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5008;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0005;THETA=0.0037;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 78075684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7169;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78075752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0662;AVGPOST=0.9980;RSQ=0.9877;ERATE=0.0003;THETA=0.0013;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 78075807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4946;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 78075822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0800;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 78075846 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8478;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78075847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4983;AVGPOST=0.9904;RSQ=0.9873;ERATE=0.0023;THETA=0.0006;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 78075871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78075891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4671;AVGPOST=0.9977;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 78075938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9847;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78076002 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4782;AVGPOST=0.9935;RSQ=0.9923;ERATE=0.0015;THETA=0.0007;AC=1044;AN=2184 GT:DS:GL:BD 0.47802198 0
1 78076016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0793;AVGPOST=0.9985;RSQ=0.9932;ERATE=0.0004;THETA=0.0024;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 78076102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.9001;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78076134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4503;AVGPOST=0.9926;RSQ=0.9893;ERATE=0.0015;THETA=0.0044;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 78076154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5369;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78076168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6433;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78076178 . C CAG 2974 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9587;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78076591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0038;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78076595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0244;AVGPOST=0.9977;RSQ=0.9583;ERATE=0.0022;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78076695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78076710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9853;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78076764 . AT A 191 PASS INDEL;BAVGPOST=0.998;BRSQ=0.592;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.4453;ERATE=0.0012;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78076784 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78076848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0313;AVGPOST=0.9987;RSQ=0.9832;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 78076924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.0749;AVGPOST=0.9978;RSQ=0.9863;ERATE=0.0004;THETA=0.0015;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 78076979 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.955;LDAF=0.1144;AVGPOST=0.9818;RSQ=0.9339;ERATE=0.0027;THETA=0.0004;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 78077105 rs72325686 TGTGC T 51347 PASS INDEL;BAVGPOST=0.892;BRSQ=0.507;LDAF=0.8465;AVGPOST=0.8428;RSQ=0.5118;ERATE=0.0417;THETA=0.0008;AC=1955;AN=2184 GT:DS:GL:BD 0.89514655 1
1 78077137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0115;AVGPOST=0.9971;RSQ=0.8947;ERATE=0.0005;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78077153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9145;ERATE=0.0005;THETA=0.0026;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78077263 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78077352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78077469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78077523 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0285;AVGPOST=0.9989;RSQ=0.9847;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78077597 . GAT G 577 PASS INDEL;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78077712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.940;LDAF=0.0730;AVGPOST=0.9916;RSQ=0.9544;ERATE=0.0011;THETA=0.0002;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 78077925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1089;AVGPOST=0.9858;RSQ=0.9361;ERATE=0.0012;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 78077954 . A ATTT 69 PASS INDEL;BAVGPOST=0.992;BRSQ=0.340;LDAF=0.0042;AVGPOST=0.9948;RSQ=0.4707;ERATE=0.0012;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78078217 . T TCTC 1890 PASS INDEL;BAVGPOST=0.817;BRSQ=0.523;LDAF=0.2319;AVGPOST=0.8191;RSQ=0.6023;ERATE=0.0134;THETA=0.0003;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 78078220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.885;LDAF=0.0277;AVGPOST=0.9872;RSQ=0.8374;ERATE=0.0006;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78078468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78078512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.754;LDAF=0.0062;AVGPOST=0.9956;RSQ=0.7015;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78078537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9657;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78078576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0164;AVGPOST=0.9993;RSQ=0.9832;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78078629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78078934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0400;AVGPOST=0.9992;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 78078938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079016 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0002;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78079034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0850;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 78079054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78079121 . A ACCAG 163 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6293;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079128 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0800;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0002;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 78079150 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78079242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079355 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079402 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78079411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0001;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78079431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0168;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0002;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78079636 . A ACT 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4676;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079657 . C CT 57 PASS INDEL;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079660 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78079705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9573;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78079768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78079777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78079841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78079848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78079864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78079940 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0999;ERATE=0.0002;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78079943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0225;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0002;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78079999 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7032;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78080093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0582;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0002;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 78080142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8841;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78080192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78080196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78080284 . CATCT C 8899 PASS INDEL;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0659;AVGPOST=0.9988;RSQ=0.9912;ERATE=0.0004;THETA=0.0002;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 78080439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9424;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78080505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78080570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78080627 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78080765 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9471;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78080850 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5764;AVGPOST=0.9962;RSQ=0.9945;ERATE=0.0006;THETA=0.0002;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 78080856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.7973;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78081033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8720;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78081126 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0733;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0002;THETA=0.0014;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 78081167 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78081304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78081504 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78081604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78081606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78081639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0057;AVGPOST=0.9990;RSQ=0.9295;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78081874 . CCCTGGAAG C 358 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78081916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9182;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78082326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8782;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78082666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9550;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78082678 . CA C 323 PASS INDEL;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8198;ERATE=0.0004;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78082778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78082900 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2613;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0005;THETA=0.0007;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 78083029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7661;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78083136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0413;AVGPOST=0.9991;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 78083242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0156;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78083375 . TTTTG T 493 PASS INDEL;BAVGPOST=0.989;BRSQ=0.819;LDAF=0.0322;AVGPOST=0.9851;RSQ=0.8283;ERATE=0.0018;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78083403 . T TG 265 PASS INDEL;BAVGPOST=0.992;BRSQ=0.738;LDAF=0.0201;AVGPOST=0.9898;RSQ=0.8264;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78083414 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0474;AVGPOST=0.9941;RSQ=0.9509;ERATE=0.0011;THETA=0.0013;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 78083416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2684;AVGPOST=0.9964;RSQ=0.9926;ERATE=0.0009;THETA=0.0004;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 78083420 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0088;AVGPOST=0.9990;RSQ=0.9475;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78083513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5220;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78083669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4913;AVGPOST=0.9962;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=1072;AN=2184 GT:DS:GL:BD 0.49084249 0
1 78083673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0117;AVGPOST=0.9973;RSQ=0.8954;ERATE=0.0004;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78083791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0059;AVGPOST=0.9970;RSQ=0.7998;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78083806 rs35888850 TAGA T 34825 PASS INDEL;BAVGPOST=0.987;BRSQ=0.970;LDAF=0.2579;AVGPOST=0.9878;RSQ=0.9769;ERATE=0.0032;THETA=0.0004;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 78084079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2596;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 78084159 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7128;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78084252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5257;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78084324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0057;AVGPOST=0.9982;RSQ=0.8837;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78084338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0057;AVGPOST=0.9981;RSQ=0.8679;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78084616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0025;AVGPOST=0.9959;RSQ=0.3093;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78084736 . CACAAA C 321 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7908;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78084795 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2622;AVGPOST=0.9955;RSQ=0.9910;ERATE=0.0005;THETA=0.0005;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 78084869 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2836;AVGPOST=0.9946;RSQ=0.9900;ERATE=0.0004;THETA=0.0005;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 78085165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78085194 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6524;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78085281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78085467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9831;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78085504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0728;AVGPOST=0.9991;RSQ=0.9945;ERATE=0.0003;THETA=0.0008;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 78085602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7101;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78085607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8323;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78085722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8834;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78085740 . CT C 1872 PASS INDEL;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0154;AVGPOST=0.9973;RSQ=0.9340;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78085755 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9013;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78085865 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0090;AVGPOST=0.9960;RSQ=0.8187;ERATE=0.0006;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78085939 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6632;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78085953 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.755;LDAF=0.0075;AVGPOST=0.9974;RSQ=0.8712;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78085970 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5579;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78086250 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78086305 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0036;AVGPOST=0.9952;RSQ=0.5242;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78086451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5559;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78086589 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9802;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78086788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7847;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78086826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78086828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9739;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78086870 . CA C 8824 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0729;AVGPOST=0.9984;RSQ=0.9910;ERATE=0.0005;THETA=0.0004;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 78086888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78086958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78086983 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78087066 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.857;LDAF=0.0117;AVGPOST=0.9970;RSQ=0.8999;ERATE=0.0005;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78087178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78087278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9891;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78087298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78087316 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0086;AVGPOST=0.9965;RSQ=0.8436;ERATE=0.0008;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78087398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.950;LDAF=0.8955;AVGPOST=0.9860;RSQ=0.9412;ERATE=0.0014;THETA=0.0004;AC=1963;AN=2184 GT:DS:GL:BD 0.89880955 1
1 78087504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9982;RSQ=0.8952;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78087654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0105;AVGPOST=0.9973;RSQ=0.8924;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78087830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2611;AVGPOST=0.9963;RSQ=0.9922;ERATE=0.0004;THETA=0.0003;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 78087838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9083;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78087879 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.927;LDAF=0.6149;AVGPOST=0.9561;RSQ=0.9274;ERATE=0.0053;THETA=0.0002;AC=1344;AN=2184 GT:DS:GL:BD 0.61538464 1
1 78087923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.915;BRSQ=0.735;LDAF=0.8180;AVGPOST=0.8783;RSQ=0.6863;ERATE=0.0218;THETA=0.0033;AC=1866;AN=2184 GT:DS:GL:BD 0.85439563 1
1 78087946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0050;AVGPOST=0.9936;RSQ=0.5245;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78087980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0105;AVGPOST=0.9978;RSQ=0.9294;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78087982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78088025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78088051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0034;AVGPOST=0.9980;RSQ=0.7748;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78088141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78088253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5848;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0005;THETA=0.0004;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 78088279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0064;AVGPOST=0.9954;RSQ=0.7073;ERATE=0.0009;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78088491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0002;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78088622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5142;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78088812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0485;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78088821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7434;ERATE=0.0006;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78089008 . AC A 403 PASS INDEL;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0065;AVGPOST=0.9947;RSQ=0.7092;ERATE=0.0006;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78089020 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78089024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7768;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78089042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78089043 . T TC 333 PASS INDEL;BAVGPOST=0.992;BRSQ=0.731;LDAF=0.0142;AVGPOST=0.9888;RSQ=0.7056;ERATE=0.0017;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78089130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3997;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78089214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8976;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78089225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7252;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78089228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0084;AVGPOST=0.9930;RSQ=0.7067;ERATE=0.0007;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78089243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0458;AVGPOST=0.9974;RSQ=0.9732;ERATE=0.0005;THETA=0.0001;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 78089270 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.809;LDAF=0.3648;AVGPOST=0.8795;RSQ=0.7865;ERATE=0.0339;THETA=0.0010;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 78089290 . A AC 978 PASS INDEL;BAVGPOST=0.875;BRSQ=0.603;LDAF=0.1974;AVGPOST=0.8431;RSQ=0.6017;ERATE=0.0144;THETA=0.0008;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 78089311 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8675;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78089354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.934;LDAF=0.0421;AVGPOST=0.9945;RSQ=0.9470;ERATE=0.0005;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 78089365 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9872;ERATE=0.0003;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78089504 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6245;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78089509 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2638;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 78089601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5619;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78089706 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2591;AVGPOST=0.9975;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 78089709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8661;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78089747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0116;AVGPOST=0.9981;RSQ=0.9291;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78089786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9066;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78089892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78089914 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5840;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78089932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6240;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78089952 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9209;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78090018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9395;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78090113 . CAGGTT C 8216 PASS INDEL;BAVGPOST=0.989;BRSQ=0.928;LDAF=0.0618;AVGPOST=0.9892;RSQ=0.9262;ERATE=0.0006;THETA=0.0021;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 78090188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78090344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0002;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78090383 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0260;AVGPOST=0.9992;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78090461 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0103;AVGPOST=0.9969;RSQ=0.8988;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78090471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090486 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8596;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78090554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7340;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090555 . CT C 103 PASS INDEL;BAVGPOST=0.998;BRSQ=0.580;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5266;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0590;AVGPOST=0.9986;RSQ=0.9908;ERATE=0.0004;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 78090628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090767 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9854;ERATE=0.0002;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78090842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78090918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78090938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8862;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78090962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.5860;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 78091008 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78091042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78091118 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5860;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0012;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 78091142 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9455;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78091153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78091391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1620;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 78091415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9533;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78091529 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78091598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8990;ERATE=0.0003;THETA=0.0055;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78091629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5851;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0003;THETA=0.0001;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 78091688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8483;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78091695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78091856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9997;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78091880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78091901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3582;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 78091934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3178;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 78091994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6901;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78092137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0455;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0002;THETA=0.0008;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 78092150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3186;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 78092183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5911;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 78092231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2200;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 78092238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78092315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8777;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78092348 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8811;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78092397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8707;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78092403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0136;AVGPOST=0.9991;RSQ=0.9730;ERATE=0.0003;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78092461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78092525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78092606 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9024;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78092680 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78092921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78092922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.7059;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78092940 . TC T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78092948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2334;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 78093047 . C CA 72 PASS INDEL;BAVGPOST=0.996;BRSQ=0.603;LDAF=0.0052;AVGPOST=0.9921;RSQ=0.4009;ERATE=0.0015;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78093062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78093079 . AG A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5388;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78093146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9262;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78093357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8597;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78093369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8322;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78093445 . TAA T 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5828;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78093546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78093578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78093584 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8712;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78093612 . T TA 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78093616 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5717;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78093718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9749;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78093862 . C CT 793 PASS INDEL;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0052;AVGPOST=0.9969;RSQ=0.7540;ERATE=0.0013;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78093921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78094079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8065;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78094196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8919;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78094197 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78094216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9776;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78094222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2274;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 78094242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.942;LDAF=0.0231;AVGPOST=0.9972;RSQ=0.9589;ERATE=0.0003;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78094243 . CTATA C 129 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6001;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78094377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6768;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78094389 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78094472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9821;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78094503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8227;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78094542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78094550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2235;AVGPOST=0.9977;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 78094677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7658;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78094690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0065;AVGPOST=0.9984;RSQ=0.9234;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78094696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8305;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78094705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0632;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0003;THETA=0.0019;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 78094975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0142;AVGPOST=0.9993;RSQ=0.9757;ERATE=0.0007;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78094981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78095042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095064 . GTA G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4312;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78095194 . TG T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5747;ERATE=0.0006;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78095407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78095836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78096031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78096071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78096108 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78096235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78096486 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78096487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1364;AVGPOST=0.9956;RSQ=0.9865;ERATE=0.0004;THETA=0.0090;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78096504 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0006;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78096602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78096620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8495;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78096751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8556;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78096847 . GAC G 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78096946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0065;AVGPOST=0.9994;RSQ=0.9567;ERATE=0.0003;THETA=0.0053;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78096949 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0078;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78097041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78097065 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7619;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78097104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.9775;AVGPOST=0.9955;RSQ=0.9254;ERATE=0.0031;THETA=0.0019;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 78097189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78097253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8471;ERATE=0.0003;THETA=0.0087;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78097295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9915;AVGPOST=0.9984;RSQ=0.9377;ERATE=0.0004;THETA=0.0053;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 78097324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78097397 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8945;ERATE=0.0003;THETA=0.0037;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78097441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7629;ERATE=0.0004;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78097456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3861;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78097485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7359;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78097572 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78097772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9457;ERATE=0.0003;THETA=0.0024;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78097958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0883;AVGPOST=0.9969;RSQ=0.9866;ERATE=0.0003;THETA=0.0029;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 78097983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.757;LDAF=0.0611;AVGPOST=0.9559;RSQ=0.6974;ERATE=0.0092;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78098245 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0204;AVGPOST=0.9972;RSQ=0.9471;ERATE=0.0004;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78098254 . GATATCT G 12182 PASS INDEL;BAVGPOST=0.843;BRSQ=0.761;LDAF=0.5335;AVGPOST=0.7984;RSQ=0.7266;ERATE=0.0300;THETA=0.0004;AC=1222;AN=2184 GT:DS:GL:BD 0.55952382 1
1 78098283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.858;LDAF=0.0459;AVGPOST=0.9865;RSQ=0.8952;ERATE=0.0016;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 78098297 rs113114809 GCTATAGATAT G 1597 PASS INDEL;BAVGPOST=0.993;BRSQ=0.757;LDAF=0.0146;AVGPOST=0.9950;RSQ=0.8513;ERATE=0.0009;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78098311 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6092;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78098321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6238;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78098331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.659;LDAF=0.0291;AVGPOST=0.9853;RSQ=0.7948;ERATE=0.0006;THETA=0.0043;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78098343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.671;LDAF=0.0072;AVGPOST=0.9958;RSQ=0.7816;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78098353 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.511;LDAF=0.0293;AVGPOST=0.9676;RSQ=0.5679;ERATE=0.0037;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78098361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7350;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78098483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.6237;AVGPOST=0.9949;RSQ=0.9928;ERATE=0.0005;THETA=0.0006;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 78098486 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9139;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78098497 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5703;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78098503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78098530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5678;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78098533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6194;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098603 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78098687 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.9035;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78098731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78098867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9485;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78099088 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.946;LDAF=0.0324;AVGPOST=0.9974;RSQ=0.9677;ERATE=0.0003;THETA=0.0010;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78099181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78099250 rs11444647 G GC 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7404;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78099264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78099285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8560;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78099347 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.7990;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78099417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78099630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9243;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78099765 . CA C 422 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.7114;ERATE=0.0004;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78099772 . A AG 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4564;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78099773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6834;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78099810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78099819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0184;AVGPOST=0.9985;RSQ=0.9666;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78099880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5131;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78099960 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.941;LDAF=0.9757;AVGPOST=0.9957;RSQ=0.9260;ERATE=0.0005;THETA=0.0004;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 78100082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5866;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78100172 . G GT 338 PASS INDEL;BAVGPOST=0.998;BRSQ=0.649;LDAF=0.0034;AVGPOST=0.9969;RSQ=0.6349;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78100177 . GC G 161 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8095;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78100201 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5580;AVGPOST=0.9941;RSQ=0.9930;ERATE=0.0007;THETA=0.0006;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 78100231 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78100267 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6729;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78100310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6613;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78100371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0901;AVGPOST=0.9984;RSQ=0.9913;ERATE=0.0004;THETA=0.0004;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 78100476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0896;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 78100560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6223;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 78100940 . TG T 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78100998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78101047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7755;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78101142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4759;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78101215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78101245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7058;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78101426 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8006;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78101527 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9116;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78101564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0184;AVGPOST=0.9990;RSQ=0.9793;ERATE=0.0003;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78101568 rs113221533 TC T 7280 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0655;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0003;THETA=0.0012;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 78101590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6772;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78101619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0656;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 78101624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7050;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78101629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78101697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5701;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78101886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78101936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.7976;AVGPOST=0.9974;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=1742;AN=2184 GT:DS:GL:BD 0.79761904 1
1 78102229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6473;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78102259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78102410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78102512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8937;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78102549 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7647;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78102618 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5945;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78102755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0897;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 78102830 . TCTA T 383 PASS INDEL;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7130;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78102873 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78102988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78103072 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78103285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3026;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 78103322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3032;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0005;THETA=0.0005;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 78103372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9328;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78103393 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0317;AVGPOST=0.9962;RSQ=0.9490;ERATE=0.0003;THETA=0.0008;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78103420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0534;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 78103430 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3089;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0010;THETA=0.0006;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 78103483 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3027;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0005;THETA=0.0007;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 78103515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3525;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78103577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0111;AVGPOST=0.9977;RSQ=0.9067;ERATE=0.0005;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78103592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.885;LDAF=0.0587;AVGPOST=0.9810;RSQ=0.8755;ERATE=0.0007;THETA=0.0006;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 78103593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.584;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7405;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78103625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0077;AVGPOST=0.9979;RSQ=0.8825;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78103640 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0532;AVGPOST=0.9986;RSQ=0.9904;ERATE=0.0005;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 78103815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7106;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78103911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9850;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78103938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0102;AVGPOST=0.9994;RSQ=0.9740;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78103988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78104020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78104242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5503;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78104247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78104267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78104280 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1532;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 78104323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9263;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78104362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1049;AVGPOST=0.9963;RSQ=0.9840;ERATE=0.0005;THETA=0.0002;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 78104438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1448;AVGPOST=0.9981;RSQ=0.9946;ERATE=0.0004;THETA=0.0006;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 78104470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78104486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0100;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78104516 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78104521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1235;AVGPOST=0.9982;RSQ=0.9926;ERATE=0.0004;THETA=0.0013;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 78104539 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7678;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78104543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8687;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78104546 . CT C 3164 PASS INDEL;BAVGPOST=0.995;BRSQ=0.893;LDAF=0.0221;AVGPOST=0.9977;RSQ=0.9562;ERATE=0.0004;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78104564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3031;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0006;THETA=0.0004;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 78104625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3030;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 78104668 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5037;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78104681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78104789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1452;AVGPOST=0.9969;RSQ=0.9905;ERATE=0.0004;THETA=0.0003;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 78104792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6891;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78104812 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4663;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 78104815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78104873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5584;ERATE=0.0009;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78104910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0535;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 78104968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7765;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78105061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6259;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78105092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2304;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0006;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 78105162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78105242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3031;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 78105414 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78105445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8753;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78105488 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78105509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8215;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78105532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0535;AVGPOST=0.9990;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 78105615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0042;AVGPOST=0.9943;RSQ=0.5511;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78105649 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5515;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78105692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5713;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78105859 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3032;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0005;THETA=0.0010;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 78105883 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7593;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78106119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9577;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78106133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78106188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5424;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78106295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7787;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78106302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9869;ERATE=0.0004;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78106334 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78106390 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9666;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78106477 . CT C 419 PASS INDEL;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9126;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78106514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78106521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78106563 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2304;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 78106600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4979;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78106628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6649;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78106786 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3023;AVGPOST=0.9974;RSQ=0.9950;ERATE=0.0010;THETA=0.0007;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 78106835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6599;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78106960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78106964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9351;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78107094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.889;LDAF=0.0449;AVGPOST=0.9926;RSQ=0.9359;ERATE=0.0004;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 78107147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0037;AVGPOST=0.9955;RSQ=0.5191;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78107160 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8055;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78107238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2837;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0004;THETA=0.0005;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 78107264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9554;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78107270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0050;AVGPOST=1.0000;RSQ=0.9956;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78107359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78107370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3125;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0005;THETA=0.0007;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 78107392 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78107398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2838;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 78107536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78107555 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78107590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0535;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 78107634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78107678 . C CATTCCCCCAAT 590 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4846;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78107774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9519;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78107870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78107960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9288;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78108095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9735;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78108142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78108149 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78108156 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78108244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78108267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.953;LDAF=0.6091;AVGPOST=0.9664;RSQ=0.9482;ERATE=0.0179;THETA=0.0003;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 78108341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6029;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78108504 . TC T 233 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78108597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5944;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78108691 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7283;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78108711 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78108800 rs60773154 CTT C 2870 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78108814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78108817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78109023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78109065 . TAAG T 238 PASS INDEL;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8946;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78109086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78109109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78109161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78109223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78109263 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9905;ERATE=0.0002;THETA=0.0025;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78109290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9085;ERATE=0.0002;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78109319 . CAGT C 423 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8510;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78109412 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78109509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1446;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0003;THETA=0.0012;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 78109513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8202;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78109527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78109545 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78109590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6424;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78109612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0065;AVGPOST=0.9976;RSQ=0.8366;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78109841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.5019;AVGPOST=0.9877;RSQ=0.9824;ERATE=0.0023;THETA=0.0003;AC=1097;AN=2184 GT:DS:GL:BD 0.50228935 1
1 78109845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78109928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0063;AVGPOST=0.9983;RSQ=0.8811;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78109953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7687;ERATE=0.0004;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78109971 . AC A 327 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9764;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78110146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6668;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0006;THETA=0.0004;AC=1457;AN=2184 GT:DS:GL:BD 0.66712457 1
1 78110178 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78110210 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78110243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6862;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=1500;AN=2184 GT:DS:GL:BD 0.68681318 1
1 78110271 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1387;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 78110359 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78110413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5139;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 78110433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7152;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78110437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9438;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78110466 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0002;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78110467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78110475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9213;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78110527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8577;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78110638 rs72463289 GTATC G 42861 PASS INDEL;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.5052;AVGPOST=0.9673;RSQ=0.9510;ERATE=0.0070;THETA=0.0013;AC=1115;AN=2184 GT:DS:GL:BD 0.51053113 1
1 78110701 rs11444102 T TC 58576 PASS INDEL;BAVGPOST=0.942;BRSQ=0.882;LDAF=0.6997;AVGPOST=0.9437;RSQ=0.9062;ERATE=0.0063;THETA=0.0006;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 78110713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0002;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78110727 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78110737 rs111797795 A AC 30248 PASS INDEL;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.6723;AVGPOST=0.9896;RSQ=0.9818;ERATE=0.0003;THETA=0.0006;AC=1470;AN=2184 GT:DS:GL:BD 0.67307693 1
1 78110909 . C CA 4520 PASS INDEL;BAVGPOST=0.883;BRSQ=0.773;LDAF=0.5653;AVGPOST=0.8183;RSQ=0.7010;ERATE=0.0365;THETA=0.0011;AC=1305;AN=2184 GT:DS:GL:BD 0.59752744 1
1 78110913 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9450;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78110992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78111038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8152;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78111218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0073;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78111270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0278;AVGPOST=0.9993;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78111468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78111710 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8544;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78111807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78111878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6887;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78112033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78112064 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9998;RSQ=0.9763;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78112468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6087;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78112498 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78112501 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9302;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78112603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78112627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.925;LDAF=0.0409;AVGPOST=0.9952;RSQ=0.9578;ERATE=0.0003;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 78112792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7412;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78112817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0233;AVGPOST=0.9984;RSQ=0.9737;ERATE=0.0004;THETA=0.0009;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78112983 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0092;AVGPOST=0.9984;RSQ=0.9501;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78113293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9897;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78113344 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9268;ERATE=0.0006;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78113431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5595;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0004;THETA=0.0009;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 78113451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.3657;AVGPOST=0.9864;RSQ=0.9801;ERATE=0.0011;THETA=0.0004;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 78113625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7715;ERATE=0.0002;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78113714 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8223;ERATE=0.0004;THETA=0.0062;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78113825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.929;LDAF=0.0583;AVGPOST=0.9864;RSQ=0.9098;ERATE=0.0019;THETA=0.0009;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 78113848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.593;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6739;ERATE=0.0003;THETA=0.0062;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78113865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.978;LDAF=0.5772;AVGPOST=0.9771;RSQ=0.9709;ERATE=0.0063;THETA=0.0007;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 78113872 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0039;AVGPOST=0.9966;RSQ=0.6426;ERATE=0.0010;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78113902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0410;AVGPOST=0.9981;RSQ=0.9804;ERATE=0.0003;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 78113969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78114120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9507;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78114143 . CCTT C 792 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0116;AVGPOST=0.9963;RSQ=0.8829;ERATE=0.0002;THETA=0.0063;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78114160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.861;LDAF=0.4899;AVGPOST=0.9038;RSQ=0.8703;ERATE=0.0218;THETA=0.0008;AC=1100;AN=2184 GT:DS:GL:BD 0.50366300 1
1 78114212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.775;LDAF=0.0507;AVGPOST=0.9710;RSQ=0.7744;ERATE=0.0006;THETA=0.0044;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 78114226 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78114561 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5685;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0005;THETA=0.0006;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 78114564 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5684;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0004;THETA=0.0014;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 78114605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0100;AVGPOST=0.9998;RSQ=0.9892;ERATE=0.0003;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78114768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.902;LDAF=0.0145;AVGPOST=0.9977;RSQ=0.9274;ERATE=0.0007;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78114788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9336;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78114808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5685;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0017;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 78114855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0066;AVGPOST=0.9991;RSQ=0.9504;ERATE=0.0002;THETA=0.0047;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78114871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0274;AVGPOST=0.9958;RSQ=0.9382;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78114953 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.882;LDAF=0.0206;AVGPOST=0.9953;RSQ=0.9093;ERATE=0.0004;THETA=0.0064;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78114961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5684;AVGPOST=0.9974;RSQ=0.9967;ERATE=0.0004;THETA=0.0009;AC=1244;AN=2184 GT:DS:GL:BD 0.56959707 1
1 78114978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5684;AVGPOST=0.9971;RSQ=0.9963;ERATE=0.0004;THETA=0.0008;AC=1244;AN=2184 GT:DS:GL:BD 0.56959707 1
1 78114998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5684;AVGPOST=0.9970;RSQ=0.9963;ERATE=0.0003;THETA=0.0068;AC=1244;AN=2184 GT:DS:GL:BD 0.56959707 1
1 78115014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5697;AVGPOST=0.9951;RSQ=0.9942;ERATE=0.0003;THETA=0.0009;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 78115060 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5698;AVGPOST=0.9948;RSQ=0.9938;ERATE=0.0004;THETA=0.0004;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 78115083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5698;AVGPOST=0.9952;RSQ=0.9942;ERATE=0.0004;THETA=0.0008;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 78115090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0138;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78115151 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5687;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=1243;AN=2184 GT:DS:GL:BD 0.56913918 1
1 78115210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0106;AVGPOST=0.9979;RSQ=0.9233;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78115234 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78115242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6664;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78115289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4417;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78115325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8651;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78115332 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5675;AVGPOST=0.9972;RSQ=0.9961;ERATE=0.0006;THETA=0.0045;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 78115437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78115445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.5650;AVGPOST=0.9952;RSQ=0.9930;ERATE=0.0005;THETA=0.0016;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 78115523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5671;AVGPOST=0.9962;RSQ=0.9946;ERATE=0.0007;THETA=0.0005;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 78115548 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78115646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78115692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5676;AVGPOST=0.9967;RSQ=0.9956;ERATE=0.0007;THETA=0.0011;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 78115726 . CA C 15304 PASS INDEL;BAVGPOST=0.900;BRSQ=0.839;LDAF=0.4084;AVGPOST=0.9207;RSQ=0.8941;ERATE=0.0034;THETA=0.0006;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 78115779 . AG A 4601 PASS INDEL;BAVGPOST=0.904;BRSQ=0.847;LDAF=0.3872;AVGPOST=0.9355;RSQ=0.9123;ERATE=0.0011;THETA=0.0008;AC=862;AN=2184 GT:DS:GL:BD 0.39468864 0
1 78115783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.888;LDAF=0.3997;AVGPOST=0.9426;RSQ=0.9229;ERATE=0.0009;THETA=0.0007;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 78115784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9974;RSQ=0.9321;ERATE=0.0004;THETA=0.0013;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78115936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.588;LDAF=0.0075;AVGPOST=0.9957;RSQ=0.8235;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78115991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0413;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 78116054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0152;AVGPOST=0.9983;RSQ=0.9529;ERATE=0.0003;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78116099 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9198;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78116108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0002;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78116158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78116173 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9218;ERATE=0.0004;THETA=0.0044;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78116175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5681;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0002;THETA=0.0008;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 78116239 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78116259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5682;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0008;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 78116311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6981;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78116405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5681;AVGPOST=0.9997;RSQ=0.9996;ERATE=0.0003;THETA=0.0010;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 78116424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5677;AVGPOST=0.9979;RSQ=0.9975;ERATE=0.0005;THETA=0.0005;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 78116456 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78116719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78116743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78116786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.5283;AVGPOST=0.9871;RSQ=0.9854;ERATE=0.0013;THETA=0.0007;AC=1157;AN=2184 GT:DS:GL:BD 0.52976191 1
1 78116822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.977;LDAF=0.5028;AVGPOST=0.9828;RSQ=0.9806;ERATE=0.0056;THETA=0.0014;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 78116825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5678;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0004;THETA=0.0041;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 78116916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9690;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78116921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.983;LDAF=0.5521;AVGPOST=0.9918;RSQ=0.9903;ERATE=0.0004;THETA=0.0077;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 78116966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.707;LDAF=0.0068;AVGPOST=0.9950;RSQ=0.7165;ERATE=0.0017;THETA=0.0035;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78116979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0002;THETA=0.0018;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78117086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78117090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.988;LDAF=0.5604;AVGPOST=0.9919;RSQ=0.9909;ERATE=0.0005;THETA=0.0004;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 78117096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.981;LDAF=0.5598;AVGPOST=0.9909;RSQ=0.9892;ERATE=0.0004;THETA=0.0038;AC=1225;AN=2184 GT:DS:GL:BD 0.56089741 1
1 78117107 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.975;LDAF=0.5543;AVGPOST=0.9831;RSQ=0.9810;ERATE=0.0010;THETA=0.0079;AC=1217;AN=2184 GT:DS:GL:BD 0.55723441 1
1 78117123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5669;AVGPOST=0.9970;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 78117168 . A AC 202 PASS INDEL;BAVGPOST=0.994;BRSQ=0.786;LDAF=0.0177;AVGPOST=0.9874;RSQ=0.7270;ERATE=0.0033;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78117272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9672;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78117323 . TAG T 237 PASS INDEL;BAVGPOST=0.995;BRSQ=0.839;LDAF=0.0204;AVGPOST=0.9875;RSQ=0.7566;ERATE=0.0077;THETA=0.0017;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78117338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9324;ERATE=0.0004;THETA=0.0024;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78117405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.3591;AVGPOST=0.9883;RSQ=0.9827;ERATE=0.0006;THETA=0.0015;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 78117422 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78117455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5655;AVGPOST=0.9972;RSQ=0.9962;ERATE=0.0005;THETA=0.0034;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 78117506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5809;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78117534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9843;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78117558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5665;AVGPOST=0.9981;RSQ=0.9974;ERATE=0.0004;THETA=0.0009;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 78117597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78117741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5488;AVGPOST=0.9912;RSQ=0.9897;ERATE=0.0017;THETA=0.0058;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 78117763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0116;AVGPOST=0.9983;RSQ=0.9393;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78117774 . GA G 551 PASS INDEL;BAVGPOST=0.992;BRSQ=0.841;LDAF=0.0289;AVGPOST=0.9818;RSQ=0.7581;ERATE=0.0081;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78117837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5654;AVGPOST=0.9968;RSQ=0.9960;ERATE=0.0004;THETA=0.0020;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 78117865 . AC A 554 PASS INDEL;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8413;ERATE=0.0003;THETA=0.0055;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78117935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8833;ERATE=0.0004;THETA=0.0089;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78118033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9427;ERATE=0.0002;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78118078 . AC A 25868 PASS INDEL;BAVGPOST=0.978;BRSQ=0.974;LDAF=0.5008;AVGPOST=0.9652;RSQ=0.9606;ERATE=0.0048;THETA=0.0031;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 78118094 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.980;LDAF=0.5090;AVGPOST=0.9793;RSQ=0.9772;ERATE=0.0004;THETA=0.0011;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 78118095 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.980;LDAF=0.5077;AVGPOST=0.9802;RSQ=0.9786;ERATE=0.0003;THETA=0.0006;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 78118096 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78118101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5218;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78118115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5682;AVGPOST=0.9974;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 78118126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78118135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5954;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78118198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0219;AVGPOST=0.9985;RSQ=0.9730;ERATE=0.0003;THETA=0.0016;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78118274 . A AG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7491;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78118343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0674;AVGPOST=0.9989;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 78118350 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9900;AVGPOST=0.9984;RSQ=0.9362;ERATE=0.0004;THETA=0.0006;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 78118397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6269;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78118426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78118497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78118540 . CAT C 835 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0151;AVGPOST=0.9973;RSQ=0.9240;ERATE=0.0005;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78118658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.6380;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78118675 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78118708 rs77210469 AC A 2277 PASS INDEL;BAVGPOST=0.993;BRSQ=0.829;LDAF=0.0180;AVGPOST=0.9964;RSQ=0.9300;ERATE=0.0005;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78118848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0181;AVGPOST=0.9985;RSQ=0.9701;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78118859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9973;RSQ=0.9358;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78118879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6978;AVGPOST=0.9970;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=1523;AN=2184 GT:DS:GL:BD 0.69734430 1
1 78118883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7558;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78118948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9984;RSQ=0.9201;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78118980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0147;AVGPOST=0.9976;RSQ=0.9380;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78119136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0119;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78119163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9058;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78119198 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78119290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9277;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78119485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78119509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9031;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78119510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78119555 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0596;AVGPOST=0.9992;RSQ=0.9940;ERATE=0.0003;THETA=0.0007;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 78119597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5535;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78119618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6050;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78119633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78119691 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78119731 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78119751 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8382;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78119758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9890;ERATE=0.0003;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78119781 . AC A 542 PASS INDEL;BAVGPOST=0.997;BRSQ=0.837;LDAF=0.0125;AVGPOST=0.9967;RSQ=0.9100;ERATE=0.0004;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78119838 rs10605658 ATTC A 2983 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0217;AVGPOST=0.9991;RSQ=0.9823;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78119854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0077;AVGPOST=0.9974;RSQ=0.8776;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78119949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9197;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78120009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.857;LDAF=0.0147;AVGPOST=0.9978;RSQ=0.9369;ERATE=0.0006;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78120037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3841;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78120105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0157;AVGPOST=0.9967;RSQ=0.9182;ERATE=0.0007;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78120112 . C CA 89 PASS INDEL;BAVGPOST=0.996;BRSQ=0.682;LDAF=0.0204;AVGPOST=0.9732;RSQ=0.4819;ERATE=0.0049;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78120185 . A AAAAG 236 PASS INDEL;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7368;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78120191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0657;AVGPOST=0.9974;RSQ=0.9837;ERATE=0.0004;THETA=0.0006;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 78120236 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0132;AVGPOST=0.9991;RSQ=0.9752;ERATE=0.0003;THETA=0.0032;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78120296 . A AT 66 PASS INDEL;BAVGPOST=0.983;BRSQ=0.476;LDAF=0.0214;AVGPOST=0.9768;RSQ=0.6136;ERATE=0.0015;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78120345 . TC T 1761 PASS INDEL;BAVGPOST=0.992;BRSQ=0.886;LDAF=0.0407;AVGPOST=0.9851;RSQ=0.8659;ERATE=0.0007;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 78120479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78120483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8844;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78120519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9008;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78120614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0140;AVGPOST=0.9992;RSQ=0.9755;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78120671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5314;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78120697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78120777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78120789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9398;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78120848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8651;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78120849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7299;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78120914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7270;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78120969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9993;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78121032 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.6921;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78121088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.680;LDAF=0.0087;AVGPOST=0.9940;RSQ=0.7447;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78121294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.758;LDAF=0.0291;AVGPOST=0.9790;RSQ=0.7252;ERATE=0.0038;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78121446 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78121460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78121479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9326;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78121489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78121497 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78121658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0036;AVGPOST=0.9952;RSQ=0.4499;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78121747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7286;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78121872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2078;AVGPOST=0.9920;RSQ=0.9812;ERATE=0.0006;THETA=0.0006;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 78121903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8458;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78122041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0216;AVGPOST=0.9993;RSQ=0.9841;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78122296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0148;AVGPOST=0.9995;RSQ=0.9851;ERATE=0.0005;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78122301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7297;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78122316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1475;AVGPOST=0.9979;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 78122319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.9547;AVGPOST=0.9904;RSQ=0.9131;ERATE=0.0013;THETA=0.0014;AC=2089;AN=2184 GT:DS:GL:BD 0.95650184 1
1 78122381 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5519;ERATE=0.0003;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78122393 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6336;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78122581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0097;AVGPOST=0.9986;RSQ=0.9480;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78122731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78122815 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0131;AVGPOST=0.9983;RSQ=0.9444;ERATE=0.0005;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78122903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.568;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7813;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78122932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0311;AVGPOST=0.9985;RSQ=0.9774;ERATE=0.0005;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78123004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7505;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78123039 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0028;AVGPOST=0.9957;RSQ=0.4678;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78123053 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.784;LDAF=0.0085;AVGPOST=0.9956;RSQ=0.7826;ERATE=0.0009;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78123177 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5936;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78123221 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6964;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78123238 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.944;LDAF=0.0289;AVGPOST=0.9986;RSQ=0.9809;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 78123276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9175;AVGPOST=0.9978;RSQ=0.9890;ERATE=0.0003;THETA=0.0009;AC=2004;AN=2184 GT:DS:GL:BD 0.91758239 1
1 78123553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.8884;AVGPOST=0.9970;RSQ=0.9890;ERATE=0.0004;THETA=0.0005;AC=1941;AN=2184 GT:DS:GL:BD 0.88873625 1
1 78123656 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9119;ERATE=0.0002;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78123740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.972;LDAF=0.1563;AVGPOST=0.9956;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 78123829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4219;AVGPOST=0.9951;RSQ=0.9925;ERATE=0.0005;THETA=0.0012;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 78123840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8957;ERATE=0.0002;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78123903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6695;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78123915 . CA C 6194 PASS INDEL;BAVGPOST=0.916;BRSQ=0.844;LDAF=0.3231;AVGPOST=0.9090;RSQ=0.8662;ERATE=0.0064;THETA=0.0005;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 78124124 rs79066233 AC A 40173 PASS INDEL;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.3994;AVGPOST=0.9908;RSQ=0.9865;ERATE=0.0004;THETA=0.0011;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 78124125 . CA C 6497 PASS INDEL;BAVGPOST=0.913;BRSQ=0.836;LDAF=0.3105;AVGPOST=0.8889;RSQ=0.8352;ERATE=0.0106;THETA=0.0006;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 78124129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78124268 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78124357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78124386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78124810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7654;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78124867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78124926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78124979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5224;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78125114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0186;AVGPOST=0.9988;RSQ=0.9741;ERATE=0.0003;THETA=0.0016;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78125179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78125194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9409;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78125380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78125434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78125543 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78125549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8072;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78125783 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0233;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0002;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78125863 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0098;AVGPOST=0.9988;RSQ=0.9466;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78125886 . TACAG T 249 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8971;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78125920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7648;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78126129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0480;AVGPOST=0.9989;RSQ=0.9898;ERATE=0.0003;THETA=0.0005;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 78126359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7329;ERATE=0.0012;THETA=0.0015;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78126367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6894;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78126584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8641;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78126777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.813;LDAF=0.0290;AVGPOST=0.9941;RSQ=0.9184;ERATE=0.0007;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 78126796 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0039;AVGPOST=0.9981;RSQ=0.8146;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78126854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.7973;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78126950 rs77128819 GT G 61015 PASS INDEL;BAVGPOST=0.992;BRSQ=0.738;LDAF=0.9736;AVGPOST=0.9823;RSQ=0.7418;ERATE=0.0019;THETA=0.0004;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 78126960 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9275;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78127424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78127539 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78127587 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6418;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78127595 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6347;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78127619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8561;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78127782 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8745;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78127838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78127853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.8254;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78127883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9081;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78127900 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5046;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78127959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78128083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8842;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78128127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1851;AVGPOST=0.9941;RSQ=0.9858;ERATE=0.0002;THETA=0.0009;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 78128171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9270;ERATE=0.0002;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78128205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78128229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0209;AVGPOST=0.9994;RSQ=0.9908;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78128239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7931;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78128494 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.476;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.4121;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78128800 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9971;RSQ=0.8486;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78128839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8832;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78128923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.494;LDAF=0.9100;AVGPOST=0.9032;RSQ=0.5558;ERATE=0.0208;THETA=0.0008;AC=2052;AN=2184 GT:DS:GL:BD 0.93956041 1
1 78129123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.9872;AVGPOST=0.9958;RSQ=0.8786;ERATE=0.0006;THETA=0.0025;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 78129236 . AAAAC A 1348 PASS INDEL;BAVGPOST=0.702;BRSQ=0.437;LDAF=0.3853;AVGPOST=0.6886;RSQ=0.4255;ERATE=0.0496;THETA=0.0006;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 78129280 rs67706673 A AACAC 2170 PASS INDEL;BAVGPOST=0.744;BRSQ=0.443;LDAF=0.3165;AVGPOST=0.7565;RSQ=0.5274;ERATE=0.0344;THETA=0.0006;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 78129282 . A ACC 334 PASS INDEL;BAVGPOST=0.837;BRSQ=0.297;LDAF=0.1722;AVGPOST=0.7944;RSQ=0.3967;ERATE=0.0271;THETA=0.0007;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 78129286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78129401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78129443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7561;ERATE=0.0004;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78129564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78129623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5621;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78129650 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0018;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78129769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6714;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78129807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7507;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0003;THETA=0.0015;AC=1641;AN=2184 GT:DS:GL:BD 0.75137365 1
1 78130037 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8463;ERATE=0.0003;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78130118 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78130155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8590;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78130181 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78130249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5957;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78130250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78130268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7580;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78130331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0071;AVGPOST=0.9961;RSQ=0.7810;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78130344 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8076;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78130370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9178;ERATE=0.0004;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78130383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9132;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78130384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7882;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78130482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7418;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0003;THETA=0.0010;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 78130585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78130717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78130727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6124;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78130886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8768;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78130992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8831;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78131026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0059;AVGPOST=0.9981;RSQ=0.8582;ERATE=0.0006;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78131078 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78131131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78131223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78131264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78131371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0030;AVGPOST=0.9962;RSQ=0.5709;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78131409 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1265;AVGPOST=0.9961;RSQ=0.9878;ERATE=0.0004;THETA=0.0013;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 78131431 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8155;ERATE=0.0003;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78131437 . GC G 415 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78131446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6237;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78131457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78131714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78131794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78131813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78132028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7448;AVGPOST=0.9980;RSQ=0.9961;ERATE=0.0005;THETA=0.0008;AC=1627;AN=2184 GT:DS:GL:BD 0.74496335 1
1 78132074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7927;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78132138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78132188 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78132204 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78132235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7986;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78132330 . CTTG C 182 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7198;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78132331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78132440 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0356;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0009;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78132582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78132600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7569;AVGPOST=0.9983;RSQ=0.9963;ERATE=0.0005;THETA=0.0008;AC=1654;AN=2184 GT:DS:GL:BD 0.75732601 1
1 78132633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78132639 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7384;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78132753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9543;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78132768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8850;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78132817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78132945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0078;AVGPOST=0.9974;RSQ=0.8957;ERATE=0.0003;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78132973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78133047 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.9984;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0007;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 78133150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78133206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78133242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2235;AVGPOST=0.9973;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 78133307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7867;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78133325 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8580;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78133394 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9991;RSQ=0.9457;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78133398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6003;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78133443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78133548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78133624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7319;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78133902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.427;LDAF=0.0205;AVGPOST=0.9764;RSQ=0.5488;ERATE=0.0061;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78133943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78133977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1756;AVGPOST=0.9875;RSQ=0.9679;ERATE=0.0005;THETA=0.0010;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 78134068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9586;ERATE=0.0002;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78134137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6355;ERATE=0.0002;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78134176 . T TA 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3693;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78134209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78134231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5433;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78134294 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78134413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4925;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78134425 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78134566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9031;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78134619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0013;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78134637 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0571;AVGPOST=0.9970;RSQ=0.9815;ERATE=0.0003;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 78134725 . T TA 164 PASS INDEL;BAVGPOST=0.978;BRSQ=0.543;LDAF=0.0245;AVGPOST=0.9844;RSQ=0.7727;ERATE=0.0004;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78134725 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9142;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78134851 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9359;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78134853 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0414;AVGPOST=0.9952;RSQ=0.9605;ERATE=0.0004;THETA=0.0017;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 78134859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8929;ERATE=0.0003;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78134860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9994;RSQ=0.9858;ERATE=0.0002;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78134892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2433;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 78134924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78134926 . C CATAT 4744 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0303;AVGPOST=0.9976;RSQ=0.9658;ERATE=0.0005;THETA=0.0009;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 78135066 . CACAA C 266 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78135113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78135197 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9514;ERATE=0.0002;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78135301 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0366;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 78135424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78135535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78135538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2340;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0002;THETA=0.0012;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 78135603 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135609 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78135664 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9268;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78135666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135740 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0958;AVGPOST=0.9976;RSQ=0.9891;ERATE=0.0004;THETA=0.0008;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 78135905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78135908 . G GT 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78135941 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78136346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0002;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78136661 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9994;RSQ=0.9857;ERATE=0.0003;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78136685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0284;AVGPOST=0.9989;RSQ=0.9883;ERATE=0.0003;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78136810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78136812 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8810;ERATE=0.0002;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78136824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7582;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78136888 . T TTA 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78136921 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0280;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78137006 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0087;AVGPOST=0.9992;RSQ=0.9592;ERATE=0.0004;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78137167 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0261;AVGPOST=0.9980;RSQ=0.9690;ERATE=0.0002;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78137180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0264;AVGPOST=0.9975;RSQ=0.9605;ERATE=0.0003;THETA=0.0022;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78137181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.7923;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78137240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8874;ERATE=0.0002;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78137433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78137459 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.7214;ERATE=0.0002;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78137465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8590;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78137487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7696;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78137604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0301;AVGPOST=0.9952;RSQ=0.9345;ERATE=0.0006;THETA=0.0011;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 78137607 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78137673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78137756 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0201;AVGPOST=0.9986;RSQ=0.9723;ERATE=0.0002;THETA=0.0014;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78137963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78138226 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78138333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8291;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78138374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78138375 . C CA 1226 PASS INDEL;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8873;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78138423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78138427 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0002;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78138505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8563;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78138571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7899;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78138728 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78138814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.5223;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78138821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8493;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78138983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0002;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78139062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78139080 . TAGC T 177 PASS INDEL;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7585;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78139426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78139434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0179;AVGPOST=0.9979;RSQ=0.9475;ERATE=0.0005;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78139468 . TG T 411 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9300;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78139549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0121;AVGPOST=0.9988;RSQ=0.9643;ERATE=0.0004;THETA=0.0013;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78139883 . CCAT C 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4498;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78140044 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8176;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78140144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6185;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78140246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78140382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78140495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8424;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78140806 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78140821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78140834 . TAAC T 1353 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9432;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78140834 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78140857 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0173;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0002;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78140900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78140925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0769;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0002;THETA=0.0008;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 78140980 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7096;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78141063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7096;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78141092 . C CA 60 PASS INDEL;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5839;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78141143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0002;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78141144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9993;RSQ=0.9858;ERATE=0.0002;THETA=0.0009;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78141276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0104;AVGPOST=0.9995;RSQ=0.9801;ERATE=0.0002;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78141311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78141340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0044;AVGPOST=0.9952;RSQ=0.6061;ERATE=0.0006;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78141405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1106;AVGPOST=0.9974;RSQ=0.9894;ERATE=0.0004;THETA=0.0005;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 78141442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78141443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.326;LDAF=0.9892;AVGPOST=0.9840;RSQ=0.4093;ERATE=0.0016;THETA=0.0010;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 78141735 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.926;LDAF=0.0188;AVGPOST=0.9960;RSQ=0.9184;ERATE=0.0005;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78141854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8200;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78142131 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1435;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0004;THETA=0.0007;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 78142159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8607;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78142199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78142204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0473;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0004;THETA=0.0017;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 78142232 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0004;THETA=0.0010;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 78142260 . G GA 173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0045;AVGPOST=0.9967;RSQ=0.7120;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78142378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0084;AVGPOST=0.9972;RSQ=0.8597;ERATE=0.0006;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78142491 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78142500 . GCAACCA G 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3181;ERATE=0.0004;THETA=0.0014;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78142533 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78142743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78142846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78142967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78143034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78143145 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1474;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0004;THETA=0.0007;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 78143214 . CTAAGT C 169 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78143541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0002;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78143603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78143647 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78143680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0093;AVGPOST=0.9976;RSQ=0.9219;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78143703 . ACTC A 888 PASS INDEL;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9747;ERATE=0.0002;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78143971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1852;AVGPOST=0.9982;RSQ=0.9955;ERATE=0.0005;THETA=0.0006;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 78144203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=0.9980;RSQ=0.9503;ERATE=0.0004;THETA=0.0040;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78144240 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78144331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3719;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0004;THETA=0.0006;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 78144362 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1707;AVGPOST=0.9983;RSQ=0.9955;ERATE=0.0006;THETA=0.0006;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 78144379 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78144391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7601;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78144422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1583;AVGPOST=0.9986;RSQ=0.9961;ERATE=0.0005;THETA=0.0009;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 78144436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1043;AVGPOST=0.9972;RSQ=0.9865;ERATE=0.0004;THETA=0.0003;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 78144547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1876;AVGPOST=0.9962;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 78144715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9993;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 78144736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9361;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78144752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.7101;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78144798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1668;AVGPOST=0.9973;RSQ=0.9931;ERATE=0.0007;THETA=0.0006;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 78144843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6106;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78144961 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78145008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0164;AVGPOST=0.9988;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78145131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9696;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78145156 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78145197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1664;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0005;THETA=0.0007;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 78145286 . GC G 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.4870;ERATE=0.0005;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78145304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78145382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7742;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78145416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8666;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78145491 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3686;AVGPOST=0.9986;RSQ=0.9981;ERATE=0.0005;THETA=0.0005;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 78145509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78145586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8698;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78145613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2024;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0005;THETA=0.0021;AC=442;AN=2184 GT:DS:GL:BD 0.20238096 0
1 78145640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8531;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78145653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9462;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78145750 . T TC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3807;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78145826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78145862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7583;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78145933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9404;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78145938 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0106;AVGPOST=0.9960;RSQ=0.8674;ERATE=0.0007;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78146316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8538;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78146377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2055;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0005;THETA=0.0010;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 78146451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78146540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0396;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 78146623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8589;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78146813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0513;AVGPOST=0.9981;RSQ=0.9861;ERATE=0.0003;THETA=0.0011;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78146921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0029;AVGPOST=0.9977;RSQ=0.6761;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78146958 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1039;AVGPOST=0.9981;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 78147079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78147097 rs58739281 CT C 38501 PASS INDEL;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3520;AVGPOST=0.9787;RSQ=0.9729;ERATE=0.0072;THETA=0.0002;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 78147114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4608;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78147211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7555;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78147278 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0366;AVGPOST=0.9977;RSQ=0.9743;ERATE=0.0005;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 78147291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9974;RSQ=0.9287;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78147300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9988;RSQ=0.9391;ERATE=0.0005;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78147304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5745;ERATE=0.0010;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78147385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7943;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78147439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6753;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78147541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6394;ERATE=0.0006;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78147581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0411;AVGPOST=0.9978;RSQ=0.9772;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 78147587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0215;AVGPOST=0.9990;RSQ=0.9794;ERATE=0.0004;THETA=0.0011;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78147630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.7704;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78147631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9679;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78147659 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7926;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78147696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78147793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1552;AVGPOST=0.9971;RSQ=0.9924;ERATE=0.0004;THETA=0.0005;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 78147944 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6102;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78148049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9989;RSQ=0.9747;ERATE=0.0003;THETA=0.0027;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78148051 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9991;RSQ=0.9538;ERATE=0.0004;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78148076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9336;ERATE=0.0005;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78148194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8695;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78148244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7060;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78148348 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78148497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.917;LDAF=0.0766;AVGPOST=0.9887;RSQ=0.9345;ERATE=0.0006;THETA=0.0010;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 78148499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78148653 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0119;AVGPOST=0.9985;RSQ=0.9646;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78148831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8670;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78148866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1037;AVGPOST=0.9965;RSQ=0.9873;ERATE=0.0006;THETA=0.0032;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 78148922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78148946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7171;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78149078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78149176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.530;LDAF=0.0046;AVGPOST=0.9951;RSQ=0.5570;ERATE=0.0006;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78149353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0191;AVGPOST=0.9912;RSQ=0.8002;ERATE=0.0009;THETA=0.0069;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78149444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0626;AVGPOST=0.9973;RSQ=0.9793;ERATE=0.0007;THETA=0.0007;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 78149661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9627;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78150068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78150168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0612;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78150200 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0617;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0005;THETA=0.0029;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 78150324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78150432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78150459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.5825;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78150465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1454;AVGPOST=0.9953;RSQ=0.9850;ERATE=0.0003;THETA=0.0006;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 78150473 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8662;AVGPOST=0.9960;RSQ=0.9882;ERATE=0.0004;THETA=0.0006;AC=1893;AN=2184 GT:DS:GL:BD 0.86675823 1
1 78150499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8600;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78150588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2041;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 78150604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9424;ERATE=0.0003;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78150632 . TTG T 535 PASS INDEL;BAVGPOST=0.975;BRSQ=0.641;LDAF=0.0523;AVGPOST=0.9473;RSQ=0.5783;ERATE=0.0204;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78150637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78150833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78151143 rs113473169 A AC 4620 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0223;AVGPOST=0.9991;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78151229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.8674;AVGPOST=0.9957;RSQ=0.9865;ERATE=0.0004;THETA=0.0011;AC=1896;AN=2184 GT:DS:GL:BD 0.86813188 1
1 78151268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1054;AVGPOST=0.9982;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 78151307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0217;AVGPOST=0.9984;RSQ=0.9739;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78151331 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0224;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78151416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7536;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78151417 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8471;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78151473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78151477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1954;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0005;THETA=0.0006;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 78151533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7857;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78151642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0763;AVGPOST=0.9986;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 78151689 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0478;AVGPOST=0.9978;RSQ=0.9852;ERATE=0.0004;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 78151719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78151898 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9194;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78151999 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6085;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78152004 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0254;AVGPOST=0.9988;RSQ=0.9837;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78152024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0085;AVGPOST=0.9974;RSQ=0.8738;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78152034 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.8786;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78152067 . AT A 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5689;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78152196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5499;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78152240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.742;LDAF=0.0800;AVGPOST=0.9375;RSQ=0.6861;ERATE=0.0085;THETA=0.0017;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 78152381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0052;AVGPOST=0.9920;RSQ=0.3879;ERATE=0.0007;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78152562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.520;LDAF=0.0056;AVGPOST=0.9909;RSQ=0.4043;ERATE=0.0011;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78152564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0080;AVGPOST=0.9902;RSQ=0.4981;ERATE=0.0010;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78152605 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78152659 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78152680 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7217;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78152695 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0074;AVGPOST=0.9981;RSQ=0.9054;ERATE=0.0004;THETA=0.0019;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78152711 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9508;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78152712 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4836;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78152808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0621;AVGPOST=0.9983;RSQ=0.9892;ERATE=0.0004;THETA=0.0008;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78152892 . TC T 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6567;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78152907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0179;AVGPOST=0.9996;RSQ=0.9892;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78152944 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78152989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7731;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78153026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78153234 . T TG 289 PASS INDEL;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9266;ERATE=0.0004;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78153276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.8895;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78153338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5424;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78153357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78153361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78153448 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78153465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7570;ERATE=0.0017;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78153498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0043;AVGPOST=0.9982;RSQ=0.8231;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78153500 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78153554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78153581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78153623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1048;AVGPOST=0.9982;RSQ=0.9929;ERATE=0.0004;THETA=0.0009;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 78153714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.902;LDAF=0.0550;AVGPOST=0.9886;RSQ=0.9221;ERATE=0.0003;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 78153769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78153789 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7966;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78153998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78154098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1022;AVGPOST=0.9983;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 78154180 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78154225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.922;LDAF=0.1156;AVGPOST=0.9848;RSQ=0.9478;ERATE=0.0005;THETA=0.0011;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 78154236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7376;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78154277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0201;AVGPOST=0.9969;RSQ=0.9376;ERATE=0.0006;THETA=0.0013;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78154330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9025;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78154470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78154574 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78154630 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5553;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78154656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78154856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78155177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78155293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9218;AVGPOST=0.9993;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=2013;AN=2184 GT:DS:GL:BD 0.92170328 1
1 78155390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78155393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78155408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1606;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 78155417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2959;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 78155439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78155472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9103;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78155505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2962;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 78155601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78155681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6580;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78155696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78155758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78155759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8502;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78155873 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0163;AVGPOST=0.9993;RSQ=0.9811;ERATE=0.0003;THETA=0.0026;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78156033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78156101 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78156120 rs71775048 C CAG 15914 PASS INDEL;BAVGPOST=0.979;BRSQ=0.957;LDAF=0.2829;AVGPOST=0.9824;RSQ=0.9722;ERATE=0.0006;THETA=0.0004;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 78156131 . G GAGT 16525 PASS INDEL;BAVGPOST=0.980;BRSQ=0.959;LDAF=0.2816;AVGPOST=0.9825;RSQ=0.9727;ERATE=0.0003;THETA=0.0004;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 78156133 . A AG 10544 PASS INDEL;BAVGPOST=0.980;BRSQ=0.959;LDAF=0.2808;AVGPOST=0.9804;RSQ=0.9683;ERATE=0.0005;THETA=0.0003;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 78156134 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7279;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78156154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7604;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78156209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0604;AVGPOST=0.9987;RSQ=0.9912;ERATE=0.0004;THETA=0.0003;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 78156449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78156452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5701;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78156477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1408;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 78156538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4703;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0006;THETA=0.0005;AC=1028;AN=2184 GT:DS:GL:BD 0.47069597 0
1 78156602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0039;AVGPOST=0.9971;RSQ=0.7111;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78156611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9790;AVGPOST=0.9983;RSQ=0.9728;ERATE=0.0003;THETA=0.0005;AC=2139;AN=2184 GT:DS:GL:BD 0.97939563 1
1 78156625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.1150;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0019;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 78156632 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.794;LDAF=0.0121;AVGPOST=0.9934;RSQ=0.7927;ERATE=0.0004;THETA=0.0022;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78156681 . CAAT C 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5029;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78156681 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78156682 rs71760269 GATAAAA G 471 PASS INDEL;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0062;AVGPOST=0.9941;RSQ=0.6576;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78156685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2202;AVGPOST=0.9972;RSQ=0.9936;ERATE=0.0006;THETA=0.0003;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 78156781 . T TG 253 PASS INDEL;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0066;AVGPOST=0.9958;RSQ=0.7624;ERATE=0.0006;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78156867 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0731;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 78156883 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7146;ERATE=0.0004;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78156964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0076;AVGPOST=0.9969;RSQ=0.8265;ERATE=0.0008;THETA=0.0025;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78157003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78157020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78157051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.4634;AVGPOST=0.9878;RSQ=0.9832;ERATE=0.0025;THETA=0.0001;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 78157063 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1096;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0004;THETA=0.0002;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 78157163 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4669;AVGPOST=0.9962;RSQ=0.9950;ERATE=0.0003;THETA=0.0008;AC=1018;AN=2184 GT:DS:GL:BD 0.46611720 0
1 78157213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0918;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 78157231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2911;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 78157281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.9028;ERATE=0.0003;THETA=0.0050;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78157325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5403;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78157326 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1503;AVGPOST=0.9959;RSQ=0.9876;ERATE=0.0007;THETA=0.0005;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 78157355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.910;LDAF=0.0308;AVGPOST=0.9951;RSQ=0.9329;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 78157385 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6582;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78157415 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0527;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 78157472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0938;AVGPOST=0.9983;RSQ=0.9922;ERATE=0.0007;THETA=0.0002;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 78157498 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6093;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78157541 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78157563 . CCT C 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5800;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78157709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78157753 . A AGG 143 PASS INDEL;BAVGPOST=0.987;BRSQ=0.516;LDAF=0.0233;AVGPOST=0.9698;RSQ=0.5020;ERATE=0.0027;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78157767 rs80004228 G GAA 64694 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4997;AVGPOST=0.9876;RSQ=0.9834;ERATE=0.0014;THETA=0.0004;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 78157768 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78157796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.946;LDAF=0.0258;AVGPOST=0.9945;RSQ=0.9255;ERATE=0.0006;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78157855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6717;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78157925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9542;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78158159 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8340;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78158222 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7311;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78158251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78158252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5036;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0005;AC=1101;AN=2184 GT:DS:GL:BD 0.50412089 1
1 78158254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78158338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1659;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 78158403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.690;LDAF=0.0191;AVGPOST=0.9869;RSQ=0.7370;ERATE=0.0020;THETA=0.0001;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78158478 . A AT 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7093;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78158523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8244;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78158689 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78158691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78158768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5035;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=1101;AN=2184 GT:DS:GL:BD 0.50412089 1
1 78158789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78158880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78158924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78158969 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9753;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78159256 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5645;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=1234;AN=2184 GT:DS:GL:BD 0.56501830 1
1 78159269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0637;AVGPOST=0.9984;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 78159331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6711;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78159439 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0080;AVGPOST=0.9970;RSQ=0.8554;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78159481 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78159505 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5320;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78159530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3305;AVGPOST=0.9957;RSQ=0.9926;ERATE=0.0010;THETA=0.0003;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 78159599 . CA C 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78159647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.6356;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0001;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 78159742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0334;AVGPOST=0.9982;RSQ=0.9837;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 78159791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4807;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78159835 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6303;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78159869 . ATGT A 20527 PASS INDEL;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2560;AVGPOST=0.9966;RSQ=0.9920;ERATE=0.0010;THETA=0.0002;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 78160036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0334;AVGPOST=0.9977;RSQ=0.9726;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 78160050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6345;AVGPOST=0.9968;RSQ=0.9944;ERATE=0.0010;THETA=0.0004;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 78160334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0060;AVGPOST=0.9946;RSQ=0.6499;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78160362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.9083;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78160375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2591;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 78160398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.848;LDAF=0.0479;AVGPOST=0.9829;RSQ=0.8596;ERATE=0.0025;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 78160414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2558;AVGPOST=0.9982;RSQ=0.9959;ERATE=0.0006;THETA=0.0002;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 78160472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6362;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=1392;AN=2184 GT:DS:GL:BD 0.63736266 1
1 78160483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.5687;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78160500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78160523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78160558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5594;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78160604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5425;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78160620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78160625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0122;AVGPOST=0.9992;RSQ=0.9683;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78160687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1448;AVGPOST=0.9977;RSQ=0.9927;ERATE=0.0004;THETA=0.0006;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 78160849 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0399;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 78161044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6563;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78161056 . AG A 196 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78161156 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6347;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=1388;AN=2184 GT:DS:GL:BD 0.63553113 1
1 78161165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2556;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 78161218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78161284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5671;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78161345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78161381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6269;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78161457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6474;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78161499 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8924;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78161582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78161729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9841;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78161865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7912;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78162038 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6597;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78162085 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6934;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78162098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78162228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0105;AVGPOST=0.9982;RSQ=0.9332;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78162326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9167;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78162332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5090;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78162345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78162358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78162582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8510;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78162807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3455;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 78162889 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9270;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78162904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8866;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78162950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.9849;AVGPOST=0.9970;RSQ=0.9175;ERATE=0.0005;THETA=0.0004;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 78163059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3279;AVGPOST=0.9967;RSQ=0.9939;ERATE=0.0008;THETA=0.0005;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 78163069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78163405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8852;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78163455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.3810;AVGPOST=0.9853;RSQ=0.9775;ERATE=0.0026;THETA=0.0004;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 78163595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9595;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78163605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.722;LDAF=0.9711;AVGPOST=0.9796;RSQ=0.7078;ERATE=0.0032;THETA=0.0003;AC=2136;AN=2184 GT:DS:GL:BD 0.97802198 1
1 78163757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.945;LDAF=0.6002;AVGPOST=0.9340;RSQ=0.8969;ERATE=0.0061;THETA=0.0004;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 78163845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.541;LDAF=0.0076;AVGPOST=0.9934;RSQ=0.6521;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78163945 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3477;AVGPOST=0.9954;RSQ=0.9916;ERATE=0.0010;THETA=0.0004;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 78164184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0024;AVGPOST=0.9969;RSQ=0.4520;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78164196 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5235;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78164253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6997;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78164423 . AG A 169 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6366;ERATE=0.0014;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78164514 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4869;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78164549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78164551 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9996;RSQ=0.9832;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78164643 . T TA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6942;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78164646 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7246;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78164652 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5607;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78164705 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9673;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78164719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9015;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78164753 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2049;ERATE=0.0004;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78164779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78164903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7270;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78164931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9264;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78164955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1885;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 78164959 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78165276 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.931;LDAF=0.0177;AVGPOST=0.9971;RSQ=0.9395;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78165348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78165358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3280;AVGPOST=0.9937;RSQ=0.9901;ERATE=0.0022;THETA=0.0017;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 78165390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7655;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78165591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0148;AVGPOST=0.9976;RSQ=0.9381;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78165696 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3669;AVGPOST=0.9963;RSQ=0.9948;ERATE=0.0009;THETA=0.0004;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 78165758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7890;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78165893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1902;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0025;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 78166006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9706;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78166027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0310;AVGPOST=0.9969;RSQ=0.9654;ERATE=0.0004;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78166063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9119;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78166064 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7590;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78166126 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78166162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0064;AVGPOST=0.9987;RSQ=0.9080;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78166205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78166269 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0322;AVGPOST=0.9995;RSQ=0.9934;ERATE=0.0003;THETA=0.0012;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78166378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6430;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78166685 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8308;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78166757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9420;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78166758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78166778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0038;AVGPOST=0.9991;RSQ=0.9130;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78166889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78166904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6860;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78166905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78166912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9114;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78166946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8377;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78166973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.8072;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78167047 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8140;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78167127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0118;AVGPOST=0.9981;RSQ=0.9460;ERATE=0.0004;THETA=0.0014;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78167219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8766;ERATE=0.0003;THETA=0.0044;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78167226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9210;ERATE=0.0004;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78167279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0246;AVGPOST=0.9975;RSQ=0.9694;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78167354 . GA G 148 PASS INDEL;BAVGPOST=0.994;BRSQ=0.666;LDAF=0.0116;AVGPOST=0.9945;RSQ=0.8024;ERATE=0.0007;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78167446 . GGAAC G 2147 PASS INDEL;BAVGPOST=0.807;BRSQ=0.556;LDAF=0.2185;AVGPOST=0.8560;RSQ=0.6945;ERATE=0.0040;THETA=0.0004;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 78167464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.845;LDAF=0.0806;AVGPOST=0.9695;RSQ=0.8649;ERATE=0.0019;THETA=0.0004;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 78167468 . CGAAG C 2609 PASS INDEL;BAVGPOST=0.771;BRSQ=0.518;LDAF=0.2340;AVGPOST=0.8741;RSQ=0.7477;ERATE=0.0014;THETA=0.0010;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 78167468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.865;BRSQ=0.518;LDAF=0.1519;AVGPOST=0.8983;RSQ=0.7109;ERATE=0.0035;THETA=0.0003;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 78167478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.855;BRSQ=0.572;LDAF=0.2296;AVGPOST=0.8490;RSQ=0.6636;ERATE=0.0084;THETA=0.0016;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 78167482 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7946;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78167624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7354;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78167700 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78167784 . T TC 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.5411;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78167852 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7490;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78167897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5631;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78167899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4592;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78167919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78167970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9995;RSQ=0.9795;ERATE=0.0003;THETA=0.0013;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78168278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8075;ERATE=0.0008;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78168363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8782;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78168405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9181;ERATE=0.0003;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78168469 . CA C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78168476 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0122;AVGPOST=0.9988;RSQ=0.9679;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78168494 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8934;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78168548 . CA C 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78168603 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.3831;AVGPOST=0.9929;RSQ=0.9908;ERATE=0.0004;THETA=0.0003;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 78168897 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0548;AVGPOST=0.9981;RSQ=0.9880;ERATE=0.0004;THETA=0.0043;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 78168927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0251;AVGPOST=0.9959;RSQ=0.9354;ERATE=0.0004;THETA=0.0015;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78168988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0043;AVGPOST=0.9971;RSQ=0.7244;ERATE=0.0005;THETA=0.0103;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78168996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.733;LDAF=0.0067;AVGPOST=0.9966;RSQ=0.7880;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78169208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9618;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78169236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0154;AVGPOST=0.9990;RSQ=0.9769;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78169252 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9469;ERATE=0.0004;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78169291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3521;AVGPOST=0.9911;RSQ=0.9867;ERATE=0.0021;THETA=0.0040;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 78169311 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0064;AVGPOST=0.9986;RSQ=0.9333;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78169349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78169366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.973;LDAF=0.8255;AVGPOST=0.9872;RSQ=0.9665;ERATE=0.0016;THETA=0.0009;AC=1806;AN=2184 GT:DS:GL:BD 0.82692307 1
1 78169408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9884;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78169501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6472;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78169630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8609;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78169651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0216;AVGPOST=0.9996;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78169669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78169697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9739;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78169714 . CTAACATTA C 255 PASS INDEL;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5696;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78169727 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9380;ERATE=0.0006;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78169904 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78169927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78170044 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9655;ERATE=0.0005;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78170306 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8094;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78170607 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78170746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78170771 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78170812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78170821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78170922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0882;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 78171081 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78171180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.0662;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78171182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0493;AVGPOST=0.9989;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 78171309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78171612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78171636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78171862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78171872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9082;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78171894 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9596;AVGPOST=0.9993;RSQ=0.9924;ERATE=0.0004;THETA=0.0039;AC=2096;AN=2184 GT:DS:GL:BD 0.95970696 1
1 78171901 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9725;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78172004 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.9697;AVGPOST=0.9975;RSQ=0.9679;ERATE=0.0005;THETA=0.0016;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 78172119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0104;AVGPOST=0.9974;RSQ=0.9066;ERATE=0.0006;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78172309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8169;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78172416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.9962;AVGPOST=0.9987;RSQ=0.8764;ERATE=0.0004;THETA=0.0002;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 78172435 . A ACT 3130 PASS INDEL;BAVGPOST=0.985;BRSQ=0.922;LDAF=0.0946;AVGPOST=0.9775;RSQ=0.9137;ERATE=0.0016;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 78172444 rs77541199 C CTG 9841 PASS INDEL;BAVGPOST=0.989;BRSQ=0.945;LDAF=0.0984;AVGPOST=0.9915;RSQ=0.9665;ERATE=0.0011;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 78172447 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0120;AVGPOST=0.9981;RSQ=0.9254;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78172533 rs3833546 CGGGG C 1197 PASS INDEL;BAVGPOST=0.975;BRSQ=0.481;LDAF=0.0415;AVGPOST=0.9521;RSQ=0.5721;ERATE=0.0011;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78172584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.831;LDAF=0.0096;AVGPOST=0.9940;RSQ=0.7707;ERATE=0.0007;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78172656 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7386;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78172967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5746;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78173024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5006;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78173025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0061;AVGPOST=0.9952;RSQ=0.7062;ERATE=0.0006;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78173101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.777;LDAF=0.0154;AVGPOST=0.9890;RSQ=0.7126;ERATE=0.0010;THETA=0.0020;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78173104 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0504;AVGPOST=0.9935;RSQ=0.9530;ERATE=0.0006;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78173181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.601;LDAF=0.0042;AVGPOST=0.9954;RSQ=0.5656;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78173497 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.5830;AVGPOST=0.9740;RSQ=0.9601;ERATE=0.0009;THETA=0.0002;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 78173506 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0487;AVGPOST=0.9983;RSQ=0.9865;ERATE=0.0003;THETA=0.0015;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78173527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.5840;AVGPOST=0.9745;RSQ=0.9612;ERATE=0.0006;THETA=0.0053;AC=1278;AN=2184 GT:DS:GL:BD 0.58516484 1
1 78173540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0208;AVGPOST=0.9929;RSQ=0.8778;ERATE=0.0006;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78173621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.933;LDAF=0.0249;AVGPOST=0.9963;RSQ=0.9350;ERATE=0.0004;THETA=0.0018;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78173763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0753;AVGPOST=0.9933;RSQ=0.9677;ERATE=0.0005;THETA=0.0045;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 78173798 . A ACG 362 PASS INDEL;BAVGPOST=0.997;BRSQ=0.775;LDAF=0.0140;AVGPOST=0.9904;RSQ=0.7033;ERATE=0.0013;THETA=0.0123;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78173866 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4435;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78173936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0205;AVGPOST=0.9972;RSQ=0.9431;ERATE=0.0005;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78173983 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6002;ERATE=0.0004;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78174047 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4406;ERATE=0.0004;THETA=0.0087;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78174065 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2928;AVGPOST=0.9945;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 78174185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8366;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78174211 . T TTCCC 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3695;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78174340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78174377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4989;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78174479 . CTCTG C 1523 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0089;AVGPOST=0.9984;RSQ=0.9192;ERATE=0.0004;THETA=0.0060;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78174498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8376;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78174641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0723;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0003;THETA=0.0008;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 78175007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78175392 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6096;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78175555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7931;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78175575 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78175733 rs3835663 A AT 4210 PASS INDEL;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0515;AVGPOST=0.9964;RSQ=0.9724;ERATE=0.0007;THETA=0.0006;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78175759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78175798 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0109;AVGPOST=0.9986;RSQ=0.9588;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78175818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6247;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78175825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5266;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78175891 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6362;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78176016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78176106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4540;ERATE=0.0015;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78176218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5370;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78176262 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78176280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5647;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78176410 . AG A 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3076;ERATE=0.0007;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78176425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0082;AVGPOST=0.9996;RSQ=0.9800;ERATE=0.0004;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78176603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9579;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78176611 . ATTAGT A 1076 PASS INDEL;BAVGPOST=0.996;BRSQ=0.689;LDAF=0.0096;AVGPOST=0.9923;RSQ=0.6649;ERATE=0.0012;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78176663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78176763 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78176889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0117;AVGPOST=0.9989;RSQ=0.9619;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78177514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78177590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6657;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78177652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78177756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1419;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 78177826 . A AT 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6307;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78177853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2398;AVGPOST=0.9980;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 78178212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5596;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78178322 . TG T 136 PASS INDEL;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6411;ERATE=0.0008;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78178391 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.8378;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78178392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4901;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78178430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4912;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78178488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0135;AVGPOST=0.9985;RSQ=0.9519;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78178592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78178715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8810;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78178817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8590;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78178848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6076;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78178972 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78178984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9214;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78179028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8675;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78179070 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6596;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78179142 rs112300776 TTTTG T 984 PASS INDEL;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8775;ERATE=0.0004;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78179153 . G GT 135 PASS INDEL;BAVGPOST=0.966;BRSQ=0.492;LDAF=0.0511;AVGPOST=0.9362;RSQ=0.4658;ERATE=0.0159;THETA=0.0032;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78179163 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.575;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5535;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78179169 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0726;AVGPOST=0.9988;RSQ=0.9921;ERATE=0.0006;THETA=0.0012;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 78179354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4084;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78179381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0563;AVGPOST=0.9986;RSQ=0.9908;ERATE=0.0005;THETA=0.0008;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 78179397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.5988;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78179400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9049;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78179498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78179499 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1452;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0004;THETA=0.0041;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 78179591 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.7952;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78179606 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8648;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78179688 . CATACTT C 1306 PASS INDEL;BAVGPOST=0.996;BRSQ=0.819;LDAF=0.0101;AVGPOST=0.9971;RSQ=0.8836;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78179727 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6984;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78179754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2226;AVGPOST=0.9971;RSQ=0.9934;ERATE=0.0006;THETA=0.0002;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 78179816 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.588;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6460;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78179922 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5301;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180151 . A AT 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4672;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8080;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78180252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2245;AVGPOST=0.9969;RSQ=0.9932;ERATE=0.0005;THETA=0.0004;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 78180253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7919;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78180312 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0112;AVGPOST=0.9955;RSQ=0.8501;ERATE=0.0008;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78180350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78180446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78180476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0023;AVGPOST=0.9965;RSQ=0.4485;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180510 . TA T 5 PASS INDEL;BAVGPOST=0.952;BRSQ=0.237;LDAF=0.0250;AVGPOST=0.9682;RSQ=0.5158;ERATE=0.0009;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78180525 rs76344848 AAT A 31766 PASS INDEL;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2441;AVGPOST=0.9958;RSQ=0.9914;ERATE=0.0005;THETA=0.0003;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 78180528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1174;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 78180622 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4787;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78180671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78180674 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78180749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.878;LDAF=0.0160;AVGPOST=0.9945;RSQ=0.8652;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78180753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78180832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0001;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78180837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78180850 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.560;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6777;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78180878 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78181072 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78181079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6854;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78181285 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4825;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78181343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8675;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78181391 . GA G 1502 PASS INDEL;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0191;AVGPOST=0.9968;RSQ=0.9213;ERATE=0.0010;THETA=0.0001;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78181435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78181440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8602;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78181608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6747;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78181964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78182089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7681;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78182105 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9866;ERATE=0.0003;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78182164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0947;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 78182207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.7206;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78182227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9331;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78182488 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0935;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 78182551 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1170;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0005;THETA=0.0003;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 78182629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0167;AVGPOST=0.9996;RSQ=0.9887;ERATE=0.0004;THETA=0.0001;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78182637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1108;AVGPOST=0.9972;RSQ=0.9896;ERATE=0.0003;THETA=0.0004;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 78182698 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0938;AVGPOST=0.9986;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 78182758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78182853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78182891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.991;LDAF=0.4831;AVGPOST=0.9937;RSQ=0.9908;ERATE=0.0008;THETA=0.0004;AC=1053;AN=2184 GT:DS:GL:BD 0.48214287 0
1 78182934 . G GT 787 PASS INDEL;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8000;ERATE=0.0004;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78182935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9016;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78182936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0068;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78183021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0115;AVGPOST=0.9983;RSQ=0.9414;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78183190 . GC G 8274 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0949;AVGPOST=0.9966;RSQ=0.9843;ERATE=0.0004;THETA=0.0002;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 78183236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1067;AVGPOST=0.9980;RSQ=0.9916;ERATE=0.0006;THETA=0.0004;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 78183292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0912;AVGPOST=0.9983;RSQ=0.9917;ERATE=0.0004;THETA=0.0005;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 78183436 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6928;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78183792 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0263;AVGPOST=0.9973;RSQ=0.9640;ERATE=0.0003;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78183815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78183897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8178;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78184113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0034;AVGPOST=0.9963;RSQ=0.5695;ERATE=0.0006;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78184114 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78184541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4833;AVGPOST=0.9965;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 78184602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78184750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78184862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6243;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78184917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78184942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78185043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7667;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78185130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.599;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6106;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78185157 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9983;RSQ=0.9205;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78185158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78185401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0276;AVGPOST=0.9987;RSQ=0.9839;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78185442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1146;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 78185446 . AGGATTTCCACTG A 28701 PASS INDEL;BAVGPOST=0.985;BRSQ=0.931;LDAF=0.1082;AVGPOST=0.9968;RSQ=0.9892;ERATE=0.0004;THETA=0.0005;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 78185517 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8695;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78185546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9979;RSQ=0.9080;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78185560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0008;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 78185626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4730;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78185635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9992;RSQ=0.9596;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78185692 . AAGGCAGGT A 2510 PASS INDEL;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0152;AVGPOST=0.9976;RSQ=0.9378;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78185747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9973;RSQ=0.8942;ERATE=0.0006;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78185800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0082;AVGPOST=0.9982;RSQ=0.9032;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78185879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0042;AVGPOST=0.9969;RSQ=0.7082;ERATE=0.0009;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78185892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.883;LDAF=0.8452;AVGPOST=0.9540;RSQ=0.8635;ERATE=0.0080;THETA=0.0004;AC=1874;AN=2184 GT:DS:GL:BD 0.85805863 1
1 78185930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5643;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78185962 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78186260 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78186335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1309;AVGPOST=0.9967;RSQ=0.9899;ERATE=0.0005;THETA=0.0043;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 78186379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78186415 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0274;AVGPOST=0.9984;RSQ=0.9792;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78186479 . T TCCC 157 PASS INDEL;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0067;AVGPOST=0.9958;RSQ=0.7438;ERATE=0.0006;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78186481 . T TC 7 PASS INDEL;BAVGPOST=0.997;BRSQ=0.575;LDAF=0.0091;AVGPOST=0.9899;RSQ=0.6082;ERATE=0.0006;THETA=0.0045;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78186482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5121;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78186577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1368;AVGPOST=0.9941;RSQ=0.9824;ERATE=0.0006;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78186703 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.900;LDAF=0.5690;AVGPOST=0.9529;RSQ=0.9415;ERATE=0.0034;THETA=0.0003;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 78186747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7137;ERATE=0.0009;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78186774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0045;AVGPOST=0.9971;RSQ=0.7207;ERATE=0.0007;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78186913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8670;AVGPOST=0.9966;RSQ=0.9880;ERATE=0.0006;THETA=0.0004;AC=1893;AN=2184 GT:DS:GL:BD 0.86675823 1
1 78187059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5756;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78187114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1101;AVGPOST=0.9975;RSQ=0.9909;ERATE=0.0004;THETA=0.0004;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 78187115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6385;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78187154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0061;AVGPOST=0.9942;RSQ=0.6472;ERATE=0.0017;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78187219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6150;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78187220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5375;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78187223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4926;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78187237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.731;LDAF=0.0107;AVGPOST=0.9979;RSQ=0.9132;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78187355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.771;LDAF=0.0188;AVGPOST=0.9937;RSQ=0.8687;ERATE=0.0004;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78187422 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8739;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78187665 . A ACT 1868 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0147;AVGPOST=0.9994;RSQ=0.9805;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78187736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0578;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0003;THETA=0.0006;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 78187925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6799;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78187963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7163;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78188144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4750;AVGPOST=0.9961;RSQ=0.9944;ERATE=0.0008;THETA=0.0003;AC=1037;AN=2184 GT:DS:GL:BD 0.47481686 0
1 78188351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6903;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78188380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6592;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78188386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5678;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78188397 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0360;AVGPOST=0.9993;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78188488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0035;AVGPOST=0.9961;RSQ=0.5488;ERATE=0.0009;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78188564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0308;AVGPOST=0.9976;RSQ=0.9715;ERATE=0.0004;THETA=0.0008;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 78188587 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0057;AVGPOST=0.9983;RSQ=0.8685;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78188730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1102;AVGPOST=0.9966;RSQ=0.9890;ERATE=0.0005;THETA=0.0003;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 78188760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78188799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0127;AVGPOST=0.9986;RSQ=0.9544;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78188801 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0497;AVGPOST=0.9985;RSQ=0.9901;ERATE=0.0004;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 78188866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.975;LDAF=0.5016;AVGPOST=0.9911;RSQ=0.9878;ERATE=0.0012;THETA=0.0003;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 78189012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.851;LDAF=0.0376;AVGPOST=0.9910;RSQ=0.9032;ERATE=0.0005;THETA=0.0009;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78189050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0355;AVGPOST=0.9994;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 78189068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0052;AVGPOST=0.9972;RSQ=0.7820;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78189153 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9284;ERATE=0.0003;THETA=0.0029;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78189188 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7494;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78189209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8839;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78189299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1871;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0004;THETA=0.0003;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 78189355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4832;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78189361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.7973;ERATE=0.0008;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78189422 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78189444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1524;AVGPOST=0.9970;RSQ=0.9915;ERATE=0.0005;THETA=0.0004;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 78189503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7111;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78189575 rs35052508 CATT C 11076 PASS INDEL;BAVGPOST=0.954;BRSQ=0.859;LDAF=0.1784;AVGPOST=0.9642;RSQ=0.9152;ERATE=0.0009;THETA=0.0004;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 78189706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0033;AVGPOST=0.9952;RSQ=0.5194;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78189724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78189769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9381;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78189977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78190092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8734;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78190105 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7222;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=1577;AN=2184 GT:DS:GL:BD 0.72206962 1
1 78190190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7221;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0014;AC=1577;AN=2184 GT:DS:GL:BD 0.72206962 1
1 78190246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7226;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=1578;AN=2184 GT:DS:GL:BD 0.72252744 1
1 78190285 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78190294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78190297 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7231;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=1578;AN=2184 GT:DS:GL:BD 0.72252744 1
1 78190310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7308;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78190325 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9300;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78190400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78190522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78190575 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8565;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78190592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8586;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78190618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8875;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78190632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9070;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78190673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7259;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=1585;AN=2184 GT:DS:GL:BD 0.72573262 1
1 78190680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5685;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78190719 rs34074717 CAA C 3218 PASS INDEL;BAVGPOST=0.976;BRSQ=0.939;LDAF=0.1584;AVGPOST=0.9771;RSQ=0.9411;ERATE=0.0025;THETA=0.0003;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 78190741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0476;AVGPOST=0.9987;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78190895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5306;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78190901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78190988 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9014;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78191077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78191122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78191134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9612;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78191135 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78191136 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78191236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78191254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78191259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78191287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7147;AVGPOST=0.9965;RSQ=0.9942;ERATE=0.0004;THETA=0.0065;AC=1560;AN=2184 GT:DS:GL:BD 0.71428573 1
1 78191358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0115;AVGPOST=0.9975;RSQ=0.9187;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78191392 . AAG A 680 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0085;AVGPOST=0.9980;RSQ=0.9135;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78191406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6198;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78191431 rs71582689 C CT 11426 PASS INDEL;BAVGPOST=0.906;BRSQ=0.754;LDAF=0.2548;AVGPOST=0.8334;RSQ=0.6830;ERATE=0.0497;THETA=0.0040;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 78191431 . CTT C 378 PASS INDEL;BAVGPOST=0.979;BRSQ=0.724;LDAF=0.0374;AVGPOST=0.9797;RSQ=0.8075;ERATE=0.0016;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78191583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0404;AVGPOST=0.9989;RSQ=0.9879;ERATE=0.0004;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 78191592 . TTC T 120 PASS INDEL;BAVGPOST=0.983;BRSQ=0.608;LDAF=0.0383;AVGPOST=0.9567;RSQ=0.5130;ERATE=0.0143;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78191633 . C CT 794 PASS INDEL;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0123;AVGPOST=0.9915;RSQ=0.7438;ERATE=0.0019;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78191635 . TC T 38 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4600;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78191636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8445;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78191672 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78191750 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5195;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78191792 . T TA 171 PASS INDEL;BAVGPOST=0.997;BRSQ=0.746;LDAF=0.0104;AVGPOST=0.9904;RSQ=0.6542;ERATE=0.0016;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78191803 . T TA 2370 PASS INDEL;BAVGPOST=0.986;BRSQ=0.743;LDAF=0.0219;AVGPOST=0.9874;RSQ=0.7613;ERATE=0.0004;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78191877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1578;AVGPOST=0.9972;RSQ=0.9918;ERATE=0.0003;THETA=0.0041;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 78192001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5326;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78192053 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78192194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1524;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 78192199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0193;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78192332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78192444 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.1987;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0004;THETA=0.0007;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 78192462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78192472 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0122;AVGPOST=0.9984;RSQ=0.9505;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78192498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7110;AVGPOST=0.9952;RSQ=0.9924;ERATE=0.0007;THETA=0.0014;AC=1553;AN=2184 GT:DS:GL:BD 0.71108061 1
1 78192538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78192627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.969;LDAF=0.7125;AVGPOST=0.9593;RSQ=0.9255;ERATE=0.0051;THETA=0.0002;AC=1566;AN=2184 GT:DS:GL:BD 0.71703297 1
1 78192696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.2831;AVGPOST=0.9715;RSQ=0.9474;ERATE=0.0023;THETA=0.0006;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 78192735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.891;LDAF=0.6731;AVGPOST=0.9431;RSQ=0.9085;ERATE=0.0068;THETA=0.0002;AC=1489;AN=2184 GT:DS:GL:BD 0.68177658 1
1 78192767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.911;LDAF=0.7035;AVGPOST=0.9761;RSQ=0.9588;ERATE=0.0014;THETA=0.0005;AC=1549;AN=2184 GT:DS:GL:BD 0.70924908 1
1 78192784 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.2088;AVGPOST=0.9917;RSQ=0.9826;ERATE=0.0009;THETA=0.0002;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 78192813 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.778;LDAF=0.0084;AVGPOST=0.9963;RSQ=0.8087;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78192834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9550;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78192849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0241;AVGPOST=0.9966;RSQ=0.9544;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78192858 . T TA 176 PASS INDEL;BAVGPOST=0.997;BRSQ=0.653;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7203;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78192858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.963;LDAF=0.3651;AVGPOST=0.9899;RSQ=0.9844;ERATE=0.0006;THETA=0.0002;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 78192870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0025;AVGPOST=0.9976;RSQ=0.5938;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78192917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9982;RSQ=0.9024;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78193059 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0087;AVGPOST=0.9972;RSQ=0.8660;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78193074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0055;AVGPOST=0.9988;RSQ=0.8970;ERATE=0.0004;THETA=0.0028;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78193213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6703;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 78193258 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9992;RSQ=0.9578;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78193312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5636;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78193334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0058;AVGPOST=0.9981;RSQ=0.8510;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78193392 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0871;AVGPOST=0.9987;RSQ=0.9940;ERATE=0.0004;THETA=0.0002;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 78193437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0147;AVGPOST=0.9970;RSQ=0.9257;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78193439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5487;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78193440 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0030;AVGPOST=0.9966;RSQ=0.5252;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78193532 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4832;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78193544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7452;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78193659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.950;LDAF=0.0474;AVGPOST=0.9947;RSQ=0.9580;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 78193757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1521;AVGPOST=0.9971;RSQ=0.9919;ERATE=0.0006;THETA=0.0003;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 78193798 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9106;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78193820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8703;ERATE=0.0005;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78193827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6394;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78193831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0537;AVGPOST=0.9986;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 78193832 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5389;AVGPOST=0.9912;RSQ=0.9874;ERATE=0.0011;THETA=0.0005;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 78193864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.640;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6340;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78193993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1112;AVGPOST=0.9959;RSQ=0.9843;ERATE=0.0007;THETA=0.0006;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 78194009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8663;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78194016 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7628;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78194023 . CAGAG C 756 PASS INDEL;BAVGPOST=0.995;BRSQ=0.757;LDAF=0.0123;AVGPOST=0.9900;RSQ=0.6849;ERATE=0.0014;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78194120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6801;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78194198 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5968;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0009;THETA=0.0002;AC=1303;AN=2184 GT:DS:GL:BD 0.59661174 1
1 78194380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0441;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 78194565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0682;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 78194632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6134;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78194807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7128;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1556;AN=2184 GT:DS:GL:BD 0.71245420 1
1 78194825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78195017 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1350;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 78195075 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.9074;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78195464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4466;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78195551 . TG T 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78195712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0108;AVGPOST=0.9989;RSQ=0.9609;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78195745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0049;AVGPOST=0.9988;RSQ=0.8831;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78195748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1358;AVGPOST=0.9979;RSQ=0.9921;ERATE=0.0006;THETA=0.0002;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78195810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.767;LDAF=0.7803;AVGPOST=0.8755;RSQ=0.7112;ERATE=0.0224;THETA=0.0004;AC=1762;AN=2184 GT:DS:GL:BD 0.80677658 1
1 78195836 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1358;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78195892 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4967;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78195894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78195947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1360;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0004;THETA=0.0002;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78196021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1375;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0006;THETA=0.0002;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 78196031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1357;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78196314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0069;AVGPOST=0.9956;RSQ=0.7447;ERATE=0.0009;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78196321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78196367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78196419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6513;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78196501 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9330;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78196518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78196815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1359;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78196828 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1350;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 78196953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78197020 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78197033 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1357;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78197074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3886;AVGPOST=0.9969;RSQ=0.9951;ERATE=0.0005;THETA=0.0004;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 78197186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1358;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78197277 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8393;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0005;THETA=0.0006;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 78197340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5431;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78197365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1257;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 78197458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5772;AVGPOST=0.9988;RSQ=0.9985;ERATE=0.0005;THETA=0.0003;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 78197497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8391;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0001;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 78197521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1358;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78197545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3885;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 78197748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1358;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78197759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.9975;AVGPOST=0.9995;RSQ=0.8968;ERATE=0.0004;THETA=0.0004;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 78197779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8794;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78197787 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9223;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78197789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0064;AVGPOST=0.9988;RSQ=0.9222;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78197840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5375;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78197941 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78197973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9761;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78198016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1356;AVGPOST=0.9995;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78198074 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5828;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78198145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78198251 . A AG 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78198258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1357;AVGPOST=0.9997;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78198417 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0066;AVGPOST=0.9972;RSQ=0.8293;ERATE=0.0012;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78198439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3881;AVGPOST=0.9970;RSQ=0.9951;ERATE=0.0006;THETA=0.0005;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 78198459 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78198476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1365;AVGPOST=0.9980;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78198497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0094;AVGPOST=0.9975;RSQ=0.8992;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78198522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5247;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78198637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78198652 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0170;AVGPOST=0.9978;RSQ=0.9517;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78198706 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78198708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78198722 . AC A 1409 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0104;AVGPOST=0.9993;RSQ=0.9690;ERATE=0.0005;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78198827 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78198865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8482;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78198876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1365;AVGPOST=0.9977;RSQ=0.9919;ERATE=0.0004;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78198880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1364;AVGPOST=0.9974;RSQ=0.9909;ERATE=0.0005;THETA=0.0006;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78198884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7700;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78198885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3495;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78198911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6283;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78198916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1351;AVGPOST=0.9979;RSQ=0.9935;ERATE=0.0003;THETA=0.0011;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78198919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1355;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0004;THETA=0.0006;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78199036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.0829;ERATE=0.0005;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78199044 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1357;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78199060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78199085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78199113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78199200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8772;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78199208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78199380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4789;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78199440 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78199584 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1924;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 78199754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0056;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78199920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0150;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78200038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0003;THETA=0.0191;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78200103 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.6289;AVGPOST=0.9818;RSQ=0.9754;ERATE=0.0009;THETA=0.0058;AC=1372;AN=2184 GT:DS:GL:BD 0.62820512 1
1 78200163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2041;AVGPOST=0.9961;RSQ=0.9923;ERATE=0.0005;THETA=0.0032;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 78200571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7028;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78200590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2012;AVGPOST=0.9966;RSQ=0.9930;ERATE=0.0004;THETA=0.0012;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 78200651 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78200688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3741;AVGPOST=0.9953;RSQ=0.9936;ERATE=0.0007;THETA=0.0007;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 78200756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5959;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78200798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0178;AVGPOST=0.9978;RSQ=0.9573;ERATE=0.0003;THETA=0.0012;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78200874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7939;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78200878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3753;AVGPOST=0.9971;RSQ=0.9961;ERATE=0.0009;THETA=0.0031;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 78200971 . TTTTTTTG T 3220 PASS INDEL;BAVGPOST=0.981;BRSQ=0.819;LDAF=0.0542;AVGPOST=0.9666;RSQ=0.7731;ERATE=0.0023;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 78201000 . TG T 90 PASS INDEL;BAVGPOST=0.894;BRSQ=0.121;LDAF=0.1794;AVGPOST=0.7197;RSQ=0.1946;ERATE=0.0211;THETA=0.0010;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78201013 . GT G 1544 PASS INDEL;BAVGPOST=0.983;BRSQ=0.836;LDAF=0.0490;AVGPOST=0.9754;RSQ=0.8195;ERATE=0.0007;THETA=0.0009;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 78201014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3389;AVGPOST=0.9970;RSQ=0.9954;ERATE=0.0005;THETA=0.0004;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 78201045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0042;AVGPOST=0.9944;RSQ=0.4426;ERATE=0.0009;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78201298 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0063;AVGPOST=0.9957;RSQ=0.6950;ERATE=0.0007;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78201334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.792;LDAF=0.0198;AVGPOST=0.9815;RSQ=0.6181;ERATE=0.0012;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78201361 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0254;AVGPOST=0.9928;RSQ=0.8864;ERATE=0.0006;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78201381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0496;AVGPOST=0.9957;RSQ=0.9696;ERATE=0.0004;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 78201549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78201702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9284;ERATE=0.0004;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78201719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3633;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 78201769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78201803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6211;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78201870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.686;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7860;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78202197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.970;LDAF=0.1984;AVGPOST=0.9971;RSQ=0.9932;ERATE=0.0005;THETA=0.0004;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 78202230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0063;AVGPOST=0.9961;RSQ=0.7567;ERATE=0.0008;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78202234 . A AG 451 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0056;AVGPOST=0.9971;RSQ=0.7688;ERATE=0.0008;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78202271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6629;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78202394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78202423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0748;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 78202899 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78202911 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78202960 rs71715787 T TAA 68106 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3641;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0005;THETA=0.0004;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 78203001 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9528;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78203144 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78203148 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78203231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6200;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78203234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78203239 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78203313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6158;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78203396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1260;AVGPOST=0.9980;RSQ=0.9928;ERATE=0.0006;THETA=0.0005;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 78203461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.8944;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78203490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.953;LDAF=0.3376;AVGPOST=0.9872;RSQ=0.9831;ERATE=0.0008;THETA=0.0004;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 78203504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.939;LDAF=0.3304;AVGPOST=0.9807;RSQ=0.9742;ERATE=0.0009;THETA=0.0010;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 78203515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.564;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78203571 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7345;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78203666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3633;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0005;THETA=0.0007;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 78203695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9812;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78203706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1634;AVGPOST=0.9960;RSQ=0.9907;ERATE=0.0004;THETA=0.0004;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 78203825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6380;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78203840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0110;AVGPOST=0.9979;RSQ=0.9154;ERATE=0.0007;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78203860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2106;AVGPOST=0.9972;RSQ=0.9943;ERATE=0.0007;THETA=0.0007;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 78203987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2109;AVGPOST=0.9975;RSQ=0.9949;ERATE=0.0006;THETA=0.0002;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 78204027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2064;AVGPOST=0.9978;RSQ=0.9955;ERATE=0.0005;THETA=0.0004;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 78204090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9993;RSQ=0.9519;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78204181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4464;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78204379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78204824 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7789;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78204971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0386;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0004;THETA=0.0006;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 78204978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0100;AVGPOST=0.9979;RSQ=0.9149;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78204991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8846;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78205044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7153;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78205198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5854;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78205282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78205365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9443;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78205489 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0740;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 78205590 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0392;AVGPOST=0.9986;RSQ=0.9911;ERATE=0.0003;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 78205636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0951;AVGPOST=0.9994;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 78205642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0735;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 78205674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78205814 . T TC 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4923;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78205883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78205903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8162;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78205998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78206127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5297;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78206138 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.5856;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78206169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0093;AVGPOST=0.9978;RSQ=0.9050;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78206181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0360;AVGPOST=0.9989;RSQ=0.9857;ERATE=0.0005;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78206208 . AAGT A 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6195;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78206305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8216;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78206329 rs67425532 TA T 2949 PASS INDEL;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0750;AVGPOST=0.9970;RSQ=0.9833;ERATE=0.0005;THETA=0.0007;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 78206437 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6492;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78206549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8619;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78206615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78206669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78206685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78206776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0151;AVGPOST=0.9996;RSQ=0.9887;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78206825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78206826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78206827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78206888 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0099;AVGPOST=0.9997;RSQ=0.9901;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78206931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0083;AVGPOST=0.9981;RSQ=0.9096;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78206947 . C CA 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7040;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78207016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4822;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0005;THETA=0.0003;AC=1053;AN=2184 GT:DS:GL:BD 0.48214287 0
1 78207021 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5431;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78207103 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8605;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78207295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0120;AVGPOST=0.9951;RSQ=0.8529;ERATE=0.0007;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78207341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1241;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 78207437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0740;AVGPOST=0.9992;RSQ=0.9950;ERATE=0.0004;THETA=0.0007;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 78207448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1540;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 78207456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8112;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78207462 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78207501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78207539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8222;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78207564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0739;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 78207575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78207807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5905;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78207875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0356;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78208089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4865;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0006;THETA=0.0006;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 78208138 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9228;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=2015;AN=2184 GT:DS:GL:BD 0.92261904 1
1 78208184 . TGTAAAA T 511 PASS INDEL;BAVGPOST=0.997;BRSQ=0.712;LDAF=0.0047;AVGPOST=0.9960;RSQ=0.7079;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78208203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4728;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78208321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4845;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=1059;AN=2184 GT:DS:GL:BD 0.48489010 0
1 78208323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4859;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0004;AC=1062;AN=2184 GT:DS:GL:BD 0.48626372 0
1 78208344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9020;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78208402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9628;AVGPOST=0.9967;RSQ=0.9614;ERATE=0.0005;THETA=0.0002;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 78208526 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9730;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 78208549 . C CT 30 PASS INDEL;BAVGPOST=0.997;BRSQ=0.518;LDAF=0.0100;AVGPOST=0.9855;RSQ=0.4348;ERATE=0.0029;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78208707 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7129;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78208726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9995;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78208808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0387;AVGPOST=0.9993;RSQ=0.9929;ERATE=0.0003;THETA=0.0002;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 78208893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78208922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4857;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0005;THETA=0.0004;AC=1062;AN=2184 GT:DS:GL:BD 0.48626372 0
1 78209124 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5125;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78209287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78209312 . G GC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78209483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5470;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78209610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78209655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0358;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78209667 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78209882 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78209964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8308;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78210026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9307;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78210092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3164;AVGPOST=0.9887;RSQ=0.9801;ERATE=0.0035;THETA=0.0004;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 78210100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5029;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78210186 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2840;AVGPOST=0.9962;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 78210225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7797;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78210291 . T TA 39 PASS INDEL;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0069;AVGPOST=0.9928;RSQ=0.5926;ERATE=0.0028;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78210431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1729;AVGPOST=0.9971;RSQ=0.9923;ERATE=0.0004;THETA=0.0005;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 78210445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.931;LDAF=0.8882;AVGPOST=0.9965;RSQ=0.9873;ERATE=0.0004;THETA=0.0002;AC=1942;AN=2184 GT:DS:GL:BD 0.88919413 1
1 78210491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78210514 . G GCT 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7136;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78210599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78210614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0032;AVGPOST=0.9955;RSQ=0.4861;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78210615 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78210616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4917;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78210678 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8812;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78210724 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8899;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=1945;AN=2184 GT:DS:GL:BD 0.89056778 1
1 78210772 . CCA C 641 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9658;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78210785 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2420;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 78210809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9296;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78210818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9281;ERATE=0.0009;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78210820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0581;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 78210902 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8645;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78210990 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2428;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0004;THETA=0.0002;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 78211071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9740;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78211082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0096;AVGPOST=0.9982;RSQ=0.9204;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78211188 . TTC T 11984 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0514;AVGPOST=0.9987;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 78211231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8437;ERATE=0.0005;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78211299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78211306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2844;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0003;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 78211478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9354;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78211651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78211652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78211699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78211766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0197;AVGPOST=0.9971;RSQ=0.9471;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78211773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78211794 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0096;AVGPOST=0.9986;RSQ=0.9536;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78211817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78211834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78211866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9105;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78211949 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2843;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0009;THETA=0.0002;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 78212038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8522;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78212057 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9023;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78212070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5436;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78212152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0513;AVGPOST=0.9985;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 78212274 . G GGT 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4635;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78212391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3215;AVGPOST=0.9965;RSQ=0.9936;ERATE=0.0008;THETA=0.0002;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 78212542 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78212594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0351;AVGPOST=0.9983;RSQ=0.9811;ERATE=0.0004;THETA=0.0007;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 78212599 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78212621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5520;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78212650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78212851 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2837;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0006;THETA=0.0002;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 78212853 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9196;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78212875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0170;AVGPOST=0.9986;RSQ=0.9698;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78213058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0584;AVGPOST=0.9982;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 78213100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78213130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78213162 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1433;AVGPOST=0.9973;RSQ=0.9925;ERATE=0.0004;THETA=0.0003;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 78213285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78213295 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78213347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6492;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78213354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7495;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78213467 . CAT C 730 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.7939;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78213497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78213638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0033;AVGPOST=0.9991;RSQ=0.8927;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78213640 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7493;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78213657 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1466;AVGPOST=0.9952;RSQ=0.9865;ERATE=0.0006;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 78213706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3109;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 78213764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9488;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78213779 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78213905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8889;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78213962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0040;AVGPOST=0.9957;RSQ=0.5828;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78214124 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7011;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78214215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5625;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78214230 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78214232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0370;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78214334 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8426;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78214538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5583;AVGPOST=0.9943;RSQ=0.9915;ERATE=0.0009;THETA=0.0002;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 78214571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3288;AVGPOST=0.9968;RSQ=0.9944;ERATE=0.0006;THETA=0.0002;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 78214685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78214755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78214769 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78214810 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5702;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78214871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.489;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5540;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78214940 rs71655292;rs72301277 TTTTCTTTC T 1354 PASS INDEL;BAVGPOST=0.575;BRSQ=0.106;LDAF=0.2826;AVGPOST=0.6690;RSQ=0.2977;ERATE=0.0290;THETA=0.0008;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 78214940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5860;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78214943 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.880;LDAF=0.0453;AVGPOST=0.9918;RSQ=0.9295;ERATE=0.0004;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 78214953 rs5774931 TTC T 97 PASS INDEL;BAVGPOST=0.977;BRSQ=0.417;LDAF=0.0665;AVGPOST=0.9011;RSQ=0.3669;ERATE=0.0081;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78215002 rs5774931 CTT C 18 PASS INDEL;BAVGPOST=0.988;BRSQ=0.495;LDAF=0.0267;AVGPOST=0.9659;RSQ=0.4977;ERATE=0.0027;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78215004 rs6143263 TTC T 197 PASS INDEL;BAVGPOST=0.988;BRSQ=0.559;LDAF=0.0329;AVGPOST=0.9619;RSQ=0.5400;ERATE=0.0046;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78215006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.595;LDAF=0.0073;AVGPOST=0.9939;RSQ=0.6400;ERATE=0.0005;THETA=0.0028;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78215013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.899;LDAF=0.3166;AVGPOST=0.9402;RSQ=0.8923;ERATE=0.0112;THETA=0.0005;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 78215028 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0117;AVGPOST=0.9986;RSQ=0.9562;ERATE=0.0003;THETA=0.0024;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78215103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0055;AVGPOST=0.9952;RSQ=0.7033;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78215157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78215170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1897;AVGPOST=0.9952;RSQ=0.9883;ERATE=0.0003;THETA=0.0009;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 78215361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9369;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78215426 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0381;AVGPOST=0.9991;RSQ=0.9913;ERATE=0.0003;THETA=0.0025;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 78215499 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0326;AVGPOST=0.9990;RSQ=0.9874;ERATE=0.0004;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 78215514 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78215589 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.8113;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78215665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7215;AVGPOST=0.9963;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=1575;AN=2184 GT:DS:GL:BD 0.72115386 1
1 78215772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.7692;AVGPOST=0.9962;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=1680;AN=2184 GT:DS:GL:BD 0.76923078 1
1 78215781 rs34233845 AC A 8996 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0571;AVGPOST=0.9974;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 78215800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8696;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78215877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78215896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78215947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0335;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 78216145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78216155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7620;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78216269 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78216272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78216317 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78216408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78216411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8958;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78216476 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7553;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 78216594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5052;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78216610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78216627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7586;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78216639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.938;LDAF=0.1043;AVGPOST=0.9901;RSQ=0.9605;ERATE=0.0006;THETA=0.0006;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 78216653 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9927;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78216705 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78216767 . TGCAA T 58 PASS INDEL;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0041;AVGPOST=0.9966;RSQ=0.6873;ERATE=0.0009;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78216767 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9872;ERATE=0.0003;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78216771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78216793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.8114;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78216817 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0130;AVGPOST=0.9990;RSQ=0.9651;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78216954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78217087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0150;AVGPOST=0.9995;RSQ=0.9873;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78217098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7233;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78217155 . CAGAG C 471 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78217370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78217771 . GT G 54 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5277;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78217777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0196;AVGPOST=0.9990;RSQ=0.9790;ERATE=0.0003;THETA=0.0023;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78217935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7128;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0006;THETA=0.0021;AC=1557;AN=2184 GT:DS:GL:BD 0.71291208 1
1 78217991 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78218038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78218075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78218165 . C CT 1394 PASS INDEL;BAVGPOST=0.948;BRSQ=0.576;LDAF=0.1108;AVGPOST=0.8750;RSQ=0.4898;ERATE=0.0260;THETA=0.0009;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 78218216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.552;LDAF=0.0038;AVGPOST=0.9972;RSQ=0.7264;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78218232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0448;AVGPOST=0.9989;RSQ=0.9897;ERATE=0.0007;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 78218248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0127;AVGPOST=0.9989;RSQ=0.9664;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78218322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6538;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78218442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0261;AVGPOST=0.9984;RSQ=0.9719;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78218519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5778;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78218661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6881;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78218763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9624;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78218867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0058;AVGPOST=0.9962;RSQ=0.7467;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78218974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7528;AVGPOST=0.9952;RSQ=0.9909;ERATE=0.0012;THETA=0.0005;AC=1645;AN=2184 GT:DS:GL:BD 0.75320512 1
1 78219005 rs77964847 AT A 57579 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7536;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0010;THETA=0.0005;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 78219086 . T TC 1331 PASS INDEL;BAVGPOST=0.994;BRSQ=0.869;LDAF=0.0264;AVGPOST=0.9953;RSQ=0.9290;ERATE=0.0005;THETA=0.0029;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78219145 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.837;LDAF=0.0255;AVGPOST=0.9954;RSQ=0.9244;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78219147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78219199 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78219253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7487;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0005;THETA=0.0005;AC=1636;AN=2184 GT:DS:GL:BD 0.74908423 1
1 78219367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0082;AVGPOST=0.9967;RSQ=0.8269;ERATE=0.0008;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78219379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9490;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78219538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78219750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78219837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78219969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7002;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78219992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.936;LDAF=0.6726;AVGPOST=0.9829;RSQ=0.9721;ERATE=0.0008;THETA=0.0006;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 78219995 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78220071 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7233;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78220089 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4938;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78220094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0080;AVGPOST=0.9984;RSQ=0.9198;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78220097 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6261;AVGPOST=0.9943;RSQ=0.9915;ERATE=0.0012;THETA=0.0004;AC=1369;AN=2184 GT:DS:GL:BD 0.62683153 1
1 78220192 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78220231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.6872;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=1501;AN=2184 GT:DS:GL:BD 0.68727106 1
1 78220267 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0233;AVGPOST=0.9989;RSQ=0.9811;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78220271 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4737;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78220357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4912;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78220362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8653;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78220392 . C CT 86 PASS INDEL;BAVGPOST=0.996;BRSQ=0.759;LDAF=0.0100;AVGPOST=0.9902;RSQ=0.6052;ERATE=0.0055;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78220426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7271;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78220594 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7253;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78220678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.974;LDAF=0.6181;AVGPOST=0.9910;RSQ=0.9868;ERATE=0.0018;THETA=0.0006;AC=1355;AN=2184 GT:DS:GL:BD 0.62042123 1
1 78220689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.544;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7244;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78220715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4080;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78220735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6857;AVGPOST=0.9941;RSQ=0.9898;ERATE=0.0011;THETA=0.0006;AC=1500;AN=2184 GT:DS:GL:BD 0.68681318 1
1 78220759 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.828;LDAF=0.7642;AVGPOST=0.9058;RSQ=0.8095;ERATE=0.0117;THETA=0.0004;AC=1734;AN=2184 GT:DS:GL:BD 0.79395604 1
1 78220866 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0588;AVGPOST=0.9985;RSQ=0.9895;ERATE=0.0006;THETA=0.0019;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 78220918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6239;AVGPOST=0.9907;RSQ=0.9867;ERATE=0.0011;THETA=0.0007;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 78220951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0029;AVGPOST=0.9954;RSQ=0.3779;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78221161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0052;AVGPOST=0.9973;RSQ=0.8285;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78221270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0577;AVGPOST=0.9989;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 78221272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0048;AVGPOST=0.9969;RSQ=0.7457;ERATE=0.0010;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78221328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6703;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78221332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.6226;AVGPOST=0.9952;RSQ=0.9930;ERATE=0.0011;THETA=0.0011;AC=1360;AN=2184 GT:DS:GL:BD 0.62271065 1
1 78221409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9246;ERATE=0.0004;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78221437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6856;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0008;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 78221489 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78221529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6294;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0005;THETA=0.0004;AC=1373;AN=2184 GT:DS:GL:BD 0.62866300 1
1 78221617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78221724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5662;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78221973 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9597;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78221992 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.1370;AVGPOST=0.9948;RSQ=0.9846;ERATE=0.0009;THETA=0.0005;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 78222228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.904;LDAF=0.8255;AVGPOST=0.9882;RSQ=0.9700;ERATE=0.0010;THETA=0.0009;AC=1813;AN=2184 GT:DS:GL:BD 0.83012819 1
1 78222231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.934;LDAF=0.0349;AVGPOST=0.9968;RSQ=0.9579;ERATE=0.0005;THETA=0.0010;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78222289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6112;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78222434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5673;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78222445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6853;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 78222461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.938;LDAF=0.7968;AVGPOST=0.9557;RSQ=0.9087;ERATE=0.0051;THETA=0.0005;AC=1761;AN=2184 GT:DS:GL:BD 0.80631870 1
1 78222497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6840;AVGPOST=0.9960;RSQ=0.9927;ERATE=0.0005;THETA=0.0005;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 78222560 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5007;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78222677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5106;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78222719 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4287;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78222853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78222963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8548;ERATE=0.0005;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78222983 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0572;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 78223136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5394;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78223186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1378;AVGPOST=0.9977;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 78223453 . CT C 34 PASS INDEL;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3798;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78223458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7907;ERATE=0.0005;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78223551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78223680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9616;ERATE=0.0004;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78223842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6309;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78224109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0049;AVGPOST=0.9970;RSQ=0.7292;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78224155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5358;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78224156 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78224291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78224354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.3625;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78224361 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6869;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=1498;AN=2184 GT:DS:GL:BD 0.68589741 1
1 78224376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6296;AVGPOST=0.9974;RSQ=0.9961;ERATE=0.0005;THETA=0.0015;AC=1372;AN=2184 GT:DS:GL:BD 0.62820512 1
1 78224388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.6270;AVGPOST=0.9968;RSQ=0.9957;ERATE=0.0004;THETA=0.0007;AC=1367;AN=2184 GT:DS:GL:BD 0.62591577 1
1 78224442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.6316;AVGPOST=0.9956;RSQ=0.9942;ERATE=0.0004;THETA=0.0010;AC=1376;AN=2184 GT:DS:GL:BD 0.63003665 1
1 78224454 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6264;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0005;THETA=0.0009;AC=1365;AN=2184 GT:DS:GL:BD 0.62500000 1
1 78224534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9324;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78224566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78224673 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0136;AVGPOST=0.9972;RSQ=0.9287;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78224799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.979;LDAF=0.2112;AVGPOST=0.9936;RSQ=0.9871;ERATE=0.0005;THETA=0.0007;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 78224976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6447;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78225156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7672;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78225163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1050;AVGPOST=0.9991;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 78225210 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1050;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 78225281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9706;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78225283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7033;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78225294 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.903;LDAF=0.0276;AVGPOST=0.9931;RSQ=0.9065;ERATE=0.0004;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78225343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.7238;AVGPOST=0.9888;RSQ=0.9790;ERATE=0.0027;THETA=0.0005;AC=1586;AN=2184 GT:DS:GL:BD 0.72619045 1
1 78225362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7178;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78225546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2092;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0004;THETA=0.0001;AC=455;AN=2184 GT:DS:GL:BD 0.20833333 0
1 78225646 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.6928;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78225848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.5118;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78225886 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8072;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78225995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78226058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78226075 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.905;LDAF=0.0346;AVGPOST=0.9933;RSQ=0.9253;ERATE=0.0006;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 78226093 . GACA G 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78226119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0209;AVGPOST=0.9992;RSQ=0.9818;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78226132 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78226223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1656;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 78226325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78226405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0171;AVGPOST=0.9931;RSQ=0.8395;ERATE=0.0010;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78226569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1718;AVGPOST=0.9983;RSQ=0.9949;ERATE=0.0006;THETA=0.0004;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 78226585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78226599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0098;AVGPOST=0.9992;RSQ=0.9672;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78226624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.813;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8574;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78226643 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78226688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78226693 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2043;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=445;AN=2184 GT:DS:GL:BD 0.20375457 0
1 78226833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0329;AVGPOST=0.9987;RSQ=0.9841;ERATE=0.0004;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 78227095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78227120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5394;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78227122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9529;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78227123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6002;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78227163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0325;AVGPOST=0.9974;RSQ=0.9736;ERATE=0.0004;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78227183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9483;ERATE=0.0005;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78227255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.482;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7089;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78227397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78227472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0038;AVGPOST=0.9975;RSQ=0.7601;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78227660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0137;AVGPOST=0.9978;RSQ=0.9360;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78227684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0160;AVGPOST=0.9987;RSQ=0.9686;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78227733 . T TA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78227782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78227872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5506;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78227983 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1068;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0015;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 78228010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78228019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8289;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78228210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78228249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8471;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78228369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2062;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 78228493 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78228569 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78228588 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78228631 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.1068;AVGPOST=0.9977;RSQ=0.9903;ERATE=0.0007;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 78228827 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1771;AVGPOST=0.9974;RSQ=0.9925;ERATE=0.0005;THETA=0.0009;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 78228848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5456;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78228883 . GAAAT G 143 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7873;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78228947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78229100 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5817;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78229105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9222;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78229130 . CT C 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4696;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78229147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78229216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1071;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 78229358 rs35586232 GA G 9690 PASS INDEL;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1072;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 78229414 . AG A 1128 PASS INDEL;BAVGPOST=0.990;BRSQ=0.951;LDAF=0.1052;AVGPOST=0.9974;RSQ=0.9907;ERATE=0.0003;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 78229416 . TC T 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5504;ERATE=0.0006;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78229793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9571;ERATE=0.0003;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78229823 . TA T 241 PASS INDEL;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5654;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78229974 . A AT 81 PASS INDEL;BAVGPOST=0.990;BRSQ=0.542;LDAF=0.0252;AVGPOST=0.9650;RSQ=0.4348;ERATE=0.0077;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78229975 . T TA 503 PASS INDEL;BAVGPOST=0.975;BRSQ=0.562;LDAF=0.0468;AVGPOST=0.9439;RSQ=0.5103;ERATE=0.0069;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78235928 . AC A 2535 PASS INDEL;BAVGPOST=0.973;BRSQ=0.824;LDAF=0.0893;AVGPOST=0.9649;RSQ=0.8442;ERATE=0.0030;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 78235937 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6273;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78236145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.524;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4251;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78236191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78236297 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78236439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9792;AVGPOST=0.9993;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=2139;AN=2184 GT:DS:GL:BD 0.97939563 1
1 78236456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.1140;ERATE=0.0005;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78236522 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8012;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78236570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78236602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0118;AVGPOST=0.9990;RSQ=0.9650;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78236613 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78236659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.8086;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78236692 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8182;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78236747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78236809 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6010;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78236836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4977;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78236858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78236912 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0517;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 78236963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5920;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78236979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78236984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0754;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0002;THETA=0.0006;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 78237051 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8645;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78237081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78237247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0514;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0003;THETA=0.0008;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 78237309 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4378;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78237337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4592;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78237338 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0519;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 78237476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9395;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78237782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7082;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78237912 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78237971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0954;AVGPOST=0.9986;RSQ=0.9932;ERATE=0.0004;THETA=0.0010;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 78237995 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78238283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5782;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78238451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78238636 rs57807584 C CA 7408 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0519;AVGPOST=0.9993;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 78238704 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78238893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6128;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78238989 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0759;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 78239048 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9033;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78239225 . GGTT G 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4261;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78239362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8729;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78239446 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0518;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 78239830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5332;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78239887 . CT C 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78239936 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240088 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9243;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78240107 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.766;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8240;ERATE=0.0004;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78240189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.811;LDAF=0.0154;AVGPOST=0.9968;RSQ=0.9264;ERATE=0.0005;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78240325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78240357 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.710;LDAF=0.0051;AVGPOST=0.9943;RSQ=0.5747;ERATE=0.0012;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78240537 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240570 . CAT C 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.3909;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78240615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9168;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78240726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.9790;AVGPOST=0.9988;RSQ=0.9764;ERATE=0.0003;THETA=0.0007;AC=2139;AN=2184 GT:DS:GL:BD 0.97939563 1
1 78240814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.900;LDAF=0.0205;AVGPOST=0.9953;RSQ=0.9077;ERATE=0.0005;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78240909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78241092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78241159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.7804;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78241173 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1317;AVGPOST=0.9988;RSQ=0.9954;ERATE=0.0004;THETA=0.0006;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 78241315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4899;ERATE=0.0005;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78241316 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6383;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78241338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9335;AVGPOST=0.9989;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=2039;AN=2184 GT:DS:GL:BD 0.93360806 1
1 78241357 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78241447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0387;AVGPOST=0.9974;RSQ=0.9716;ERATE=0.0004;THETA=0.0008;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 78241700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9320;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0002;THETA=0.0017;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 78241931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.962;LDAF=0.2005;AVGPOST=0.9870;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 78242018 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.962;LDAF=0.2000;AVGPOST=0.9875;RSQ=0.9734;ERATE=0.0004;THETA=0.0010;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 78242019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78242133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.892;BRSQ=0.716;LDAF=0.7290;AVGPOST=0.8744;RSQ=0.7265;ERATE=0.0796;THETA=0.0010;AC=1645;AN=2184 GT:DS:GL:BD 0.75320512 1
1 78242176 . A AGC 48 PASS INDEL;BAVGPOST=0.934;BRSQ=0.266;LDAF=0.0799;AVGPOST=0.8995;RSQ=0.4737;ERATE=0.0091;THETA=0.0013;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 78242216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78242298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0091;AVGPOST=0.9990;RSQ=0.9568;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78242560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78242632 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8493;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78242637 . T TA 81 PASS INDEL;BAVGPOST=0.989;BRSQ=0.528;LDAF=0.0259;AVGPOST=0.9653;RSQ=0.4613;ERATE=0.0064;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78242720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6503;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78242916 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4549;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78243018 rs35627922 C CA 187 PASS INDEL;BAVGPOST=0.989;BRSQ=0.489;LDAF=0.0191;AVGPOST=0.9741;RSQ=0.4715;ERATE=0.0056;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78243030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78243032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1262;AVGPOST=0.9972;RSQ=0.9895;ERATE=0.0003;THETA=0.0006;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 78243195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78243288 rs112638793 TCCAGG T 110438 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9247;AVGPOST=0.9919;RSQ=0.9637;ERATE=0.0009;THETA=0.0024;AC=2026;AN=2184 GT:DS:GL:BD 0.92765570 1
1 78243343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78243371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5006;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78243648 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5158;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78243728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7306;AVGPOST=0.9945;RSQ=0.9897;ERATE=0.0008;THETA=0.0011;AC=1597;AN=2184 GT:DS:GL:BD 0.73122710 1
1 78244009 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6901;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78244091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78244101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.934;LDAF=0.0228;AVGPOST=0.9941;RSQ=0.9056;ERATE=0.0004;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78244110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8112;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78244297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.622;LDAF=0.0068;AVGPOST=0.9948;RSQ=0.7453;ERATE=0.0008;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78244305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.373;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5208;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78244340 . AT A 33 PASS INDEL;BAVGPOST=0.997;BRSQ=0.702;LDAF=0.0079;AVGPOST=0.9911;RSQ=0.5323;ERATE=0.0026;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78244345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7923;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78244366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0051;AVGPOST=0.9969;RSQ=0.7317;ERATE=0.0006;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78244437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0250;AVGPOST=0.9982;RSQ=0.9701;ERATE=0.0004;THETA=0.0021;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78244472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9329;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0003;THETA=0.0015;AC=2037;AN=2184 GT:DS:GL:BD 0.93269229 1
1 78244672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3067;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78244782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78244808 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5662;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78244811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9728;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78244819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0074;AVGPOST=0.9992;RSQ=0.9517;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78244821 . TG T 210 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0052;AVGPOST=0.9931;RSQ=0.5003;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78244895 . GT G 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4893;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78244913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6798;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78244945 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8230;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78245095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9434;AVGPOST=0.9992;RSQ=0.9946;ERATE=0.0003;THETA=0.0010;AC=2061;AN=2184 GT:DS:GL:BD 0.94368130 1
1 78245110 . C CATG 65 PASS INDEL;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0091;AVGPOST=0.9920;RSQ=0.6593;ERATE=0.0007;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78245183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78245225 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78245238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7286;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=1592;AN=2184 GT:DS:GL:BD 0.72893775 1
1 78245318 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78245369 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0171;AVGPOST=0.9995;RSQ=0.9870;ERATE=0.0002;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78245561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78245613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78245782 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78245947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78246005 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9330;AVGPOST=0.9985;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=2037;AN=2184 GT:DS:GL:BD 0.93269229 1
1 78246007 . A AAGTGAAT 243 PASS INDEL;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.4942;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78246053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78246082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78246083 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.4963;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78246230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5788;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78246405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9577;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78246527 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5382;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78246625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7445;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78246635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7826;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78246713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6488;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78246801 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0085;AVGPOST=0.9968;RSQ=0.8622;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78246831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8450;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=1846;AN=2184 GT:DS:GL:BD 0.84523809 1
1 78246842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9755;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78246849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78246896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0054;AVGPOST=0.9982;RSQ=0.8639;ERATE=0.0006;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78246930 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78247020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78247051 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7895;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78247134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0150;AVGPOST=0.9992;RSQ=0.9838;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78247149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0002;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78247156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78247164 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78247165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4540;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78247188 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0059;AVGPOST=0.9999;RSQ=0.9925;ERATE=0.0002;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78247264 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78247266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0083;AVGPOST=0.9987;RSQ=0.9486;ERATE=0.0002;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78247282 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78247385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8449;AVGPOST=0.9981;RSQ=0.9933;ERATE=0.0006;THETA=0.0007;AC=1846;AN=2184 GT:DS:GL:BD 0.84523809 1
1 78247391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78247403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8842;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78247518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7516;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78247534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9335;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78247594 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0053;AVGPOST=0.9973;RSQ=0.7866;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78247641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.8511;AVGPOST=0.9979;RSQ=0.9932;ERATE=0.0004;THETA=0.0004;AC=1858;AN=2184 GT:DS:GL:BD 0.85073262 1
1 78247754 . AG A 1387 PASS INDEL;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0199;AVGPOST=0.9962;RSQ=0.9261;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78247801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8248;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78247820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8901;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78247898 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0152;AVGPOST=0.9989;RSQ=0.9809;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78247906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78247932 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78247968 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78248000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8504;AVGPOST=0.9981;RSQ=0.9943;ERATE=0.0004;THETA=0.0010;AC=1858;AN=2184 GT:DS:GL:BD 0.85073262 1
1 78248027 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0152;AVGPOST=0.9996;RSQ=0.9876;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78248037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78248046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78248135 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.8043;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0004;THETA=0.0010;AC=1757;AN=2184 GT:DS:GL:BD 0.80448717 1
1 78248175 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78248228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0143;AVGPOST=0.9989;RSQ=0.9655;ERATE=0.0003;THETA=0.0014;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78248257 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78248517 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4876;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78248565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8210;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78248630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5735;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78248631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78248706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6006;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78248707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5534;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78248797 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.8038;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78248836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0086;AVGPOST=0.9976;RSQ=0.8937;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78248888 . A AT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78249060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0666;AVGPOST=0.9989;RSQ=0.9925;ERATE=0.0004;THETA=0.0005;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 78249098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78249103 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0133;AVGPOST=0.9969;RSQ=0.9200;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78249280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0143;AVGPOST=0.9991;RSQ=0.9789;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78249302 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9048;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78249409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.8234;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78249502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7865;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78249511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8908;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78249532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7748;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78249548 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0094;AVGPOST=0.9986;RSQ=0.9304;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78249649 . GA G 1473 PASS INDEL;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0194;AVGPOST=0.9944;RSQ=0.8845;ERATE=0.0015;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78249717 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78249804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0002;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78249868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7378;AVGPOST=0.9973;RSQ=0.9940;ERATE=0.0006;THETA=0.0007;AC=1613;AN=2184 GT:DS:GL:BD 0.73855311 1
1 78249933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78249943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78249967 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9994;RSQ=0.9817;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78249993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9546;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78250064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9994;RSQ=0.9816;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78250137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78250155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.7216;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78250176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6035;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78250188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78250201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78250220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8237;AVGPOST=0.9971;RSQ=0.9914;ERATE=0.0006;THETA=0.0002;AC=1801;AN=2184 GT:DS:GL:BD 0.82463372 1
1 78250248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7900;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78250377 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0659;AVGPOST=0.9989;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 78250417 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0221;AVGPOST=0.9997;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78250448 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8207;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78250470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78250488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0190;AVGPOST=0.9973;RSQ=0.9565;ERATE=0.0002;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78250589 . CG C 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6823;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78250589 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7157;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78250598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7395;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=1617;AN=2184 GT:DS:GL:BD 0.74038464 1
1 78250610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1035;AVGPOST=0.9940;RSQ=0.9748;ERATE=0.0003;THETA=0.0011;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 78250626 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8018;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78250706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78250719 rs72224480 AAT A 6437 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0656;AVGPOST=0.9985;RSQ=0.9893;ERATE=0.0006;THETA=0.0009;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 78250838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5638;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78250862 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9437;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78250992 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.925;LDAF=0.8174;AVGPOST=0.9564;RSQ=0.8838;ERATE=0.0081;THETA=0.0005;AC=1801;AN=2184 GT:DS:GL:BD 0.82463372 1
1 78251089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0003;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78251180 . TTAGA T 174 PASS INDEL;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7528;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78251397 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2572;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 78251436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7431;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78251459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9994;RSQ=0.9783;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78251509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78251537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2576;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0006;THETA=0.0006;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 78251538 . CT C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3587;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78251644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78251709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5303;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78251730 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78251746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9530;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78251759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9379;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78251844 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78251877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6221;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=1359;AN=2184 GT:DS:GL:BD 0.62225276 1
1 78252078 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0155;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78252111 . TA T 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5002;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78252121 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6954;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78252125 . AT A 93 PASS INDEL;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6429;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78252128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78252171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78252217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78252265 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2573;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 78252328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78252336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78252369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78252384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78252430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78252458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78252466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78252528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7538;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78252623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78252648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78252687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78252947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0201;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78252979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78253032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78253061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78253113 . TA T 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78253171 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78253260 rs111254735 AAT A 2361 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0235;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78253298 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78253350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6223;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0005;THETA=0.0014;AC=1361;AN=2184 GT:DS:GL:BD 0.62316847 1
1 78253378 . GCTGAAAATTTT G 139 PASS INDEL;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4684;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78253508 . T TA 202 PASS INDEL;BAVGPOST=0.999;BRSQ=0.491;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3344;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78253532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6158;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78253565 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3015;AVGPOST=0.9873;RSQ=0.9804;ERATE=0.0022;THETA=0.0006;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 78253584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7754;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78253674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0021;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78253689 . CACTA C 104 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0032;AVGPOST=0.9955;RSQ=0.4443;ERATE=0.0007;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78253703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7578;ERATE=0.0007;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78253734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0149;AVGPOST=0.9994;RSQ=0.9836;ERATE=0.0004;THETA=0.0014;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78253975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0234;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78254034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0084;AVGPOST=0.9990;RSQ=0.9563;ERATE=0.0003;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78254161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0376;AVGPOST=0.9994;RSQ=0.9916;ERATE=0.0004;THETA=0.0008;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78254211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8712;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78254234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0255;AVGPOST=0.9993;RSQ=0.9889;ERATE=0.0006;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78254265 . G GT 33 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6098;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78254304 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.3297;ERATE=0.0003;THETA=0.0018;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78254307 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78254316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8008;ERATE=0.0008;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78254346 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78254392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78254395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78254424 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0219;AVGPOST=0.9955;RSQ=0.9180;ERATE=0.0004;THETA=0.0066;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78254464 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.972;LDAF=0.2745;AVGPOST=0.9833;RSQ=0.9748;ERATE=0.0003;THETA=0.0004;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 78254472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.972;LDAF=0.2746;AVGPOST=0.9832;RSQ=0.9747;ERATE=0.0003;THETA=0.0013;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 78254473 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78254489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78254604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.5850;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78254670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0148;AVGPOST=0.9991;RSQ=0.9748;ERATE=0.0004;THETA=0.0085;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78254695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78254812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0141;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78254851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7137;ERATE=0.0004;THETA=0.0094;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78254894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0130;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78254895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0141;AVGPOST=0.9981;RSQ=0.9460;ERATE=0.0003;THETA=0.0023;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78255302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78255337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0104;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78255375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.968;LDAF=0.2659;AVGPOST=0.9818;RSQ=0.9698;ERATE=0.0010;THETA=0.0176;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 78255515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7432;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78255518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.902;LDAF=0.2314;AVGPOST=0.9598;RSQ=0.9145;ERATE=0.0167;THETA=0.0160;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 78255589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0046;AVGPOST=0.9983;RSQ=0.8770;ERATE=0.0010;THETA=0.0132;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78255611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0140;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78255773 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7592;ERATE=0.0004;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78255839 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.0618;AVGPOST=0.9964;RSQ=0.9803;ERATE=0.0004;THETA=0.0155;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 78255867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9064;ERATE=0.0003;THETA=0.0101;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78255986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3213;AVGPOST=0.9971;RSQ=0.9960;ERATE=0.0005;THETA=0.0075;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 78255991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0406;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0026;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 78256041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9842;ERATE=0.0003;THETA=0.0082;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78256055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78256056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0420;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 78256124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0174;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0009;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78256192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4173;AVGPOST=0.9996;RSQ=0.9995;ERATE=0.0003;THETA=0.0007;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 78256213 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78256219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78256262 . TA T 10 PASS INDEL;BAVGPOST=0.990;BRSQ=0.714;LDAF=0.0082;AVGPOST=0.9983;RSQ=0.9079;ERATE=0.0003;THETA=0.0027;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78256306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 78256344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0393;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0008;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 78256378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.4557;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78256485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7664;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78256514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0687;AVGPOST=0.9973;RSQ=0.9838;ERATE=0.0004;THETA=0.0025;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 78256580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0104;AVGPOST=0.9981;RSQ=0.9253;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78256581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0318;AVGPOST=0.9991;RSQ=0.9886;ERATE=0.0003;THETA=0.0017;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78256601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9679;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78256676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78256742 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7897;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78256780 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8064;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78256847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78256881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1894;AVGPOST=0.9981;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 78256907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9245;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78256993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78257066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8813;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78257167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8999;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78257230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8639;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78257283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1839;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 78257293 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5887;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78257294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9867;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78257350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8634;AVGPOST=0.9987;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 78257475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5798;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78257522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78257552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78257667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1889;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 78257668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1898;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 78257705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8250;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78257731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78257761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78258097 . G GT 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0036;AVGPOST=0.9957;RSQ=0.5884;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78258100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0040;AVGPOST=0.9982;RSQ=0.8269;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78258127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6864;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78258273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8588;AVGPOST=0.9980;RSQ=0.9941;ERATE=0.0003;THETA=0.0023;AC=1877;AN=2184 GT:DS:GL:BD 0.85943222 1
1 78258297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8249;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78258331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3389;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 78258412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78258427 . A AT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4398;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78258443 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1832;AVGPOST=0.9982;RSQ=0.9952;ERATE=0.0004;THETA=0.0006;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 78258495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1174;AVGPOST=0.9969;RSQ=0.9917;ERATE=0.0004;THETA=0.0003;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 78258640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9233;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78258652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2051;AVGPOST=0.9987;RSQ=0.9963;ERATE=0.0004;THETA=0.0007;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 78258766 rs71071964 CTTTG C 38004 PASS INDEL;BAVGPOST=0.974;BRSQ=0.953;LDAF=0.4457;AVGPOST=0.9594;RSQ=0.9384;ERATE=0.0106;THETA=0.0004;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 78258837 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4164;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78258939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0123;AVGPOST=0.9931;RSQ=0.7794;ERATE=0.0017;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78258989 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9628;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78259070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1897;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0004;THETA=0.0014;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 78259157 . AAGTC A 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5086;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78259221 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5904;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78259309 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2061;AVGPOST=0.9984;RSQ=0.9956;ERATE=0.0005;THETA=0.0005;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 78259317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78259643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=0.9990;RSQ=0.9710;ERATE=0.0002;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78259699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78259700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78259774 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78259782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7535;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78259843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78259926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78260070 . A AG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78260146 . A AG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.9073;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78260152 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8204;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78260326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78260354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0089;AVGPOST=0.9989;RSQ=0.9480;ERATE=0.0002;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78260430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0066;AVGPOST=0.9955;RSQ=0.7495;ERATE=0.0011;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78260486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0713;AVGPOST=0.9990;RSQ=0.9941;ERATE=0.0004;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 78260506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0699;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 78260532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0065;AVGPOST=0.9991;RSQ=0.9490;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78260534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2058;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 78260554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8792;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78260563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0701;AVGPOST=0.9989;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 78260576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4707;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0006;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 78260587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3359;AVGPOST=0.9968;RSQ=0.9950;ERATE=0.0004;THETA=0.0005;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 78260716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8269;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78260777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9991;RSQ=0.9753;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78260817 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78260842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6715;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78260860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3944;AVGPOST=0.9979;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 78260872 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78260911 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0229;AVGPOST=0.9954;RSQ=0.9184;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78260986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6637;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78261074 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78261210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78261220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78261264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6506;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78261279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0694;AVGPOST=0.9989;RSQ=0.9939;ERATE=0.0002;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 78261321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0692;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0002;THETA=0.0007;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 78261334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6930;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78261392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5654;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78261482 . A AG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78261601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0491;AVGPOST=0.9994;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 78261696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78261716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1168;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 78261801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5663;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78261884 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7684;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78261937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7262;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78262008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8218;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78262070 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78262144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78262178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5574;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78262214 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6457;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78262237 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1168;AVGPOST=0.9985;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 78262259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6068;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78262297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78262358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0073;AVGPOST=0.9988;RSQ=0.9290;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78262625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7805;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78262626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.2050;AVGPOST=0.9946;RSQ=0.9886;ERATE=0.0010;THETA=0.0003;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 78262796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78262920 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78263024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6684;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78263141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78263156 . TAAG T 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4802;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78263351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4782;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78263617 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0711;AVGPOST=0.9968;RSQ=0.9843;ERATE=0.0004;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 78263654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9358;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78263668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.7981;ERATE=0.0009;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78263688 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8054;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78263699 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0926;AVGPOST=0.9958;RSQ=0.9851;ERATE=0.0004;THETA=0.0003;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 78263727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78263757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0073;AVGPOST=0.9972;RSQ=0.8376;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78263895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0004;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78263975 . TG T 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78263981 . TA T 8 PASS INDEL;BAVGPOST=0.936;BRSQ=0.016;LDAF=0.1072;AVGPOST=0.8779;RSQ=0.5086;ERATE=0.0022;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 78264032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.1116;AVGPOST=0.9937;RSQ=0.9803;ERATE=0.0009;THETA=0.0003;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 78264040 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0123;AVGPOST=0.9979;RSQ=0.9251;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78264042 . TA T 216 PASS INDEL;BAVGPOST=0.986;BRSQ=0.630;LDAF=0.0358;AVGPOST=0.9633;RSQ=0.5925;ERATE=0.0066;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78264052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.8916;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78264095 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0026;AVGPOST=0.9958;RSQ=0.4258;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78264133 . G GA 12 PASS INDEL;BAVGPOST=0.990;BRSQ=0.465;LDAF=0.0237;AVGPOST=0.9676;RSQ=0.4566;ERATE=0.0055;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78264260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.4838;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78264320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0049;AVGPOST=0.9934;RSQ=0.5116;ERATE=0.0009;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78264384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78264484 . GA G 15124 PASS INDEL;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2049;AVGPOST=0.9947;RSQ=0.9875;ERATE=0.0010;THETA=0.0006;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 78264495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9262;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78264528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0039;AVGPOST=0.9988;RSQ=0.8828;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78264718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8165;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=1782;AN=2184 GT:DS:GL:BD 0.81593406 1
1 78264757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78264789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78264822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6129;AVGPOST=0.9981;RSQ=0.9975;ERATE=0.0007;THETA=0.0002;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 78264956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.8987;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78265133 . TG T 1926 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0154;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78265277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0061;AVGPOST=0.9950;RSQ=0.6793;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78265343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5701;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78265406 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4067;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78265455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0285;AVGPOST=0.9995;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78265457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5597;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78265544 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78265579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9163;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78265660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0157;AVGPOST=0.9989;RSQ=0.9752;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78265720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8426;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78265742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78265840 rs34801791 C CCT 24474 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2052;AVGPOST=0.9919;RSQ=0.9808;ERATE=0.0012;THETA=0.0005;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 78265856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78266078 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9301;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78266090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2225;AVGPOST=0.9964;RSQ=0.9922;ERATE=0.0005;THETA=0.0004;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 78266231 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8575;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78266282 . GAC G 619 PASS INDEL;BAVGPOST=0.963;BRSQ=0.629;LDAF=0.0921;AVGPOST=0.8972;RSQ=0.4898;ERATE=0.0315;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78266384 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0053;AVGPOST=0.9983;RSQ=0.8545;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78266458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0052;AVGPOST=0.9930;RSQ=0.4694;ERATE=0.0009;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78266461 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1596;AVGPOST=0.9820;RSQ=0.9499;ERATE=0.0010;THETA=0.0004;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 78266486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266640 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5629;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78266800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78267047 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5381;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78267085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6371;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78267146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8751;AVGPOST=0.9914;RSQ=0.9684;ERATE=0.0011;THETA=0.0010;AC=1915;AN=2184 GT:DS:GL:BD 0.87683153 1
1 78267549 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78267660 . TG T 54 PASS INDEL;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78267680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4991;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78267731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7054;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78267845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7324;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78268035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78268047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0146;AVGPOST=0.9993;RSQ=0.9816;ERATE=0.0003;THETA=0.0028;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78268070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8367;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78268227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0187;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0010;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78268265 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7375;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78268311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78268347 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.579;LDAF=0.0036;AVGPOST=0.9963;RSQ=0.5748;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78268354 . T TA 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78268465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9983;RSQ=0.9681;ERATE=0.0003;THETA=0.0014;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78268628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78268719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8755;AVGPOST=0.9984;RSQ=0.9935;ERATE=0.0003;THETA=0.0009;AC=1913;AN=2184 GT:DS:GL:BD 0.87591577 1
1 78268831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9871;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78268921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.833;LDAF=0.0077;AVGPOST=0.9987;RSQ=0.9248;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78269013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5896;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78269431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.4712;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78269600 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5729;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78269698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4602;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78269702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78269761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4734;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78269991 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6294;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78270023 . C CT 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0061;AVGPOST=0.9908;RSQ=0.4413;ERATE=0.0015;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78270201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4715;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78270239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5031;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78270271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0035;AVGPOST=0.9961;RSQ=0.5122;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78270422 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0198;AVGPOST=0.9986;RSQ=0.9693;ERATE=0.0004;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78270612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4785;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78270821 . TA T 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6663;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78270856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6729;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78271030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5225;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78271139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78271140 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5801;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78271163 . AC A 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6428;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78271175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8746;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78271212 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.605;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7494;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78271322 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6694;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78271461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.567;LDAF=0.0056;AVGPOST=0.9967;RSQ=0.7472;ERATE=0.0006;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78271550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78271616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7011;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=1533;AN=2184 GT:DS:GL:BD 0.70192307 1
1 78271770 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0860;AVGPOST=0.9962;RSQ=0.9840;ERATE=0.0003;THETA=0.0003;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 78271776 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9997;RSQ=0.9865;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78271848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8403;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78271890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9847;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78271934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9100;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78272008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78272218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0013;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78272334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8061;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78272516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78272540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8439;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78272581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5041;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78272582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5574;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78272627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7278;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78272640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78272748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4067;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78272978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78272985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7618;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78272986 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4529;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0005;THETA=0.0003;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 78273045 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7384;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78273062 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78273072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8387;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78273086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78273139 . AT A 592 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0122;AVGPOST=0.9957;RSQ=0.8461;ERATE=0.0008;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78273156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.824;LDAF=0.0406;AVGPOST=0.9875;RSQ=0.8856;ERATE=0.0004;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 78273180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7230;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78273240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.740;LDAF=0.0049;AVGPOST=0.9986;RSQ=0.8682;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78273248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8908;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78273283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78273305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78273306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6532;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78273330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9907;AVGPOST=0.9970;RSQ=0.8892;ERATE=0.0003;THETA=0.0004;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 78273397 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.883;LDAF=0.0210;AVGPOST=0.9980;RSQ=0.9601;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78273432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0127;AVGPOST=0.9964;RSQ=0.8915;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78273470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6708;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78273529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78273602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78273615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78273626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0269;AVGPOST=0.9973;RSQ=0.9630;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78273627 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0062;AVGPOST=0.9987;RSQ=0.9075;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78273629 . GA G 435 PASS INDEL;BAVGPOST=0.996;BRSQ=0.787;LDAF=0.0121;AVGPOST=0.9952;RSQ=0.8394;ERATE=0.0008;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78273669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9869;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78273845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78273856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6465;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78273868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0263;AVGPOST=0.9995;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78273905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0113;AVGPOST=0.9978;RSQ=0.9229;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78273955 . GA G 136 PASS INDEL;BAVGPOST=0.994;BRSQ=0.627;LDAF=0.0059;AVGPOST=0.9917;RSQ=0.4703;ERATE=0.0023;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78274019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9978;RSQ=0.9090;ERATE=0.0006;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78274131 . T TC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5258;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274230 . TTCAAACTA T 488 PASS INDEL;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7354;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78274298 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274306 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6081;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274359 . C CA 50 PASS INDEL;BAVGPOST=0.994;BRSQ=0.608;LDAF=0.0116;AVGPOST=0.9833;RSQ=0.4575;ERATE=0.0028;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78274526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5313;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7772;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78274562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7059;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0005;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 78274654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78274675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78274843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1820;AVGPOST=0.9982;RSQ=0.9951;ERATE=0.0005;THETA=0.0009;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 78274864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0667;AVGPOST=0.9978;RSQ=0.9870;ERATE=0.0009;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 78274875 . C CTA 519 PASS INDEL;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8243;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78274910 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78274912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0290;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0004;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78274985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9887;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78275029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6833;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78275086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78275212 . AAAAT A 146 PASS INDEL;BAVGPOST=0.994;BRSQ=0.681;LDAF=0.0162;AVGPOST=0.9840;RSQ=0.6016;ERATE=0.0028;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78275259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4998;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78275274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.4520;AVGPOST=0.9888;RSQ=0.9820;ERATE=0.0032;THETA=0.0004;AC=987;AN=2184 GT:DS:GL:BD 0.45192307 0
1 78275286 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78275302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0658;AVGPOST=0.9967;RSQ=0.9804;ERATE=0.0005;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 78275321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.891;LDAF=0.0262;AVGPOST=0.9971;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78275344 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9810;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78275443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78275452 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6664;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78275469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4096;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78275486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4275;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78275654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4350;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78275688 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5455;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78275726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9985;RSQ=0.9449;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78275728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9610;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78275794 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5702;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78275888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78275899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0715;AVGPOST=0.9994;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 78275916 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7635;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78276051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2689;AVGPOST=0.9950;RSQ=0.9897;ERATE=0.0013;THETA=0.0006;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 78276129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78276149 . TC T 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6030;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78276225 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9365;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78276283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0050;AVGPOST=0.9983;RSQ=0.8783;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78276338 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7516;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78276407 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5332;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78276474 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9842;AVGPOST=0.9995;RSQ=0.9858;ERATE=0.0003;THETA=0.0002;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 78276601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78276680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78276700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0136;AVGPOST=0.9958;RSQ=0.8735;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78276761 . TC T 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5261;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78276766 . A AT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6957;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78276790 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0989;AVGPOST=0.9987;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 78276855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4119;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78276880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.5677;AVGPOST=0.9773;RSQ=0.9660;ERATE=0.0036;THETA=0.0005;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 78276884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.647;LDAF=0.0046;AVGPOST=0.9956;RSQ=0.6355;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78276923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0095;AVGPOST=0.9984;RSQ=0.9314;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78276925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.596;LDAF=0.0071;AVGPOST=0.9972;RSQ=0.8550;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78276955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.615;LDAF=0.0053;AVGPOST=0.9935;RSQ=0.5504;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78277008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0166;AVGPOST=0.9921;RSQ=0.8154;ERATE=0.0006;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78277022 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.8073;ERATE=0.0004;THETA=0.0026;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78277301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78277404 . TA T 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0035;AVGPOST=0.9948;RSQ=0.4205;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78277589 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78277746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78277840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4529;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78278012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6312;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78278160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0085;AVGPOST=0.9969;RSQ=0.8624;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78278269 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6252;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78278301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0131;AVGPOST=0.9958;RSQ=0.8660;ERATE=0.0006;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78278317 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0090;AVGPOST=0.9968;RSQ=0.8491;ERATE=0.0008;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78278606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0052;AVGPOST=0.9968;RSQ=0.7519;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78278720 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.498;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6086;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78278721 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.623;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5052;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78278790 . CA C 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.7931;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78278809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.919;LDAF=0.0560;AVGPOST=0.9832;RSQ=0.8856;ERATE=0.0009;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 78278916 . T TAGAA 298 PASS INDEL;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.4951;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78278927 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5207;ERATE=0.0004;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78278987 . TAAG T 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5254;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78279143 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3112;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78279196 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78279291 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78279329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.955;LDAF=0.0973;AVGPOST=0.9916;RSQ=0.9656;ERATE=0.0005;THETA=0.0005;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 78279456 . CT C 2103 PASS INDEL;BAVGPOST=0.992;BRSQ=0.954;LDAF=0.0965;AVGPOST=0.9941;RSQ=0.9729;ERATE=0.0004;THETA=0.0049;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 78279456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.954;LDAF=0.0971;AVGPOST=0.9948;RSQ=0.9764;ERATE=0.0003;THETA=0.0012;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 78279457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3456;AVGPOST=0.9955;RSQ=0.9918;ERATE=0.0008;THETA=0.0004;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 78279614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9040;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78279708 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78279717 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9968;RSQ=0.7740;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78279804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4530;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78280264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9361;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78280287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9161;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78280334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6472;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78280348 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0934;AVGPOST=0.9966;RSQ=0.9843;ERATE=0.0005;THETA=0.0005;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 78280421 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9452;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78280512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3982;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78280546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0101;AVGPOST=0.9993;RSQ=0.9681;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78280567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4846;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78280615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0019;AVGPOST=0.9968;RSQ=0.3392;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78280675 . TG T 595 PASS INDEL;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0103;AVGPOST=0.9956;RSQ=0.8214;ERATE=0.0006;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78280746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9789;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78280887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78280993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.953;LDAF=0.4131;AVGPOST=0.9804;RSQ=0.9713;ERATE=0.0015;THETA=0.0016;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 78281285 . CA C 743 PASS INDEL;BAVGPOST=0.963;BRSQ=0.827;LDAF=0.1537;AVGPOST=0.8998;RSQ=0.7172;ERATE=0.0052;THETA=0.0004;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 78281327 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.711;LDAF=0.0311;AVGPOST=0.9766;RSQ=0.6883;ERATE=0.0035;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78281336 . A AT 500 PASS INDEL;BAVGPOST=0.982;BRSQ=0.691;LDAF=0.0284;AVGPOST=0.9776;RSQ=0.6838;ERATE=0.0028;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78281336 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.822;BRSQ=0.508;LDAF=0.7065;AVGPOST=0.7978;RSQ=0.5483;ERATE=0.0632;THETA=0.0005;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 78281340 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78281506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0135;AVGPOST=0.9993;RSQ=0.9761;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78281570 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8795;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78281571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7432;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78281712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6444;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78281722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78281930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.893;LDAF=0.0205;AVGPOST=0.9948;RSQ=0.8996;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78282084 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9995;RSQ=0.9764;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78282143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78282167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6521;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78282402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0011;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78282403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78282430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6823;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78282637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7755;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78282639 . T TA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6065;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78282703 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9231;AVGPOST=0.9988;RSQ=0.9929;ERATE=0.0003;THETA=0.0010;AC=2017;AN=2184 GT:DS:GL:BD 0.92353481 1
1 78282747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9047;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78282755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6670;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78282758 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0196;AVGPOST=0.9991;RSQ=0.9871;ERATE=0.0003;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78282775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7631;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78282828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78282872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78282896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6991;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78282981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78282988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7365;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78283112 . TA T 1061 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0103;AVGPOST=0.9967;RSQ=0.8808;ERATE=0.0006;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78283206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0154;AVGPOST=0.9985;RSQ=0.9611;ERATE=0.0004;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78283215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.682;LDAF=0.0047;AVGPOST=0.9976;RSQ=0.7852;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78283245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8284;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78283253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.810;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6571;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78283275 . AAAG A 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4518;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78283386 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.797;LDAF=0.0123;AVGPOST=0.9915;RSQ=0.7310;ERATE=0.0005;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78283424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1391;AVGPOST=0.9978;RSQ=0.9926;ERATE=0.0006;THETA=0.0003;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 78283435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9986;RSQ=0.9076;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78283514 . T TA 3049 PASS INDEL;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0372;AVGPOST=0.9954;RSQ=0.9563;ERATE=0.0007;THETA=0.0023;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78283515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78283599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5620;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78283600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5010;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78283682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.949;LDAF=0.0404;AVGPOST=0.9940;RSQ=0.9400;ERATE=0.0004;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 78283765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1399;AVGPOST=0.9985;RSQ=0.9949;ERATE=0.0005;THETA=0.0003;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 78283827 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5908;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78284011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9034;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78284012 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.6457;AVGPOST=0.9956;RSQ=0.9932;ERATE=0.0005;THETA=0.0005;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 78284029 . TC T 9722 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1409;AVGPOST=0.9949;RSQ=0.9839;ERATE=0.0007;THETA=0.0004;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 78284030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6324;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78284183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7529;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78284198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7533;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78284212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0117;AVGPOST=0.9973;RSQ=0.9071;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78284283 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8776;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78284338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7353;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78284354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1382;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 78284371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78284420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1366;AVGPOST=0.9985;RSQ=0.9948;ERATE=0.0005;THETA=0.0002;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 78284582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9273;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78284596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6910;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78284613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78284614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1387;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 78284711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5081;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78284747 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78284786 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1766;AVGPOST=0.9965;RSQ=0.9918;ERATE=0.0006;THETA=0.0005;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 78284856 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78284864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9540;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78284884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78284932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78284966 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0344;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 78284984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78284991 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1384;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 78285111 . CCAAA C 295 PASS INDEL;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0028;AVGPOST=0.9994;RSQ=0.9065;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78285161 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5873;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78285244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0078;AVGPOST=0.9964;RSQ=0.8270;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78285377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9846;AVGPOST=0.9981;RSQ=0.9561;ERATE=0.0004;THETA=0.0003;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 78285418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6322;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78285485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7580;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78285502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4343;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78285545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5461;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78285625 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78285778 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.1631;AVGPOST=0.9941;RSQ=0.9852;ERATE=0.0004;THETA=0.0005;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 78285805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6860;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78285865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8424;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78285917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8732;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78285956 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9843;AVGPOST=0.9996;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 78286007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8651;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78286048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.932;LDAF=0.0139;AVGPOST=0.9964;RSQ=0.9038;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78286103 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1382;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 78286112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.942;LDAF=0.0283;AVGPOST=0.9952;RSQ=0.9406;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78286182 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0283;AVGPOST=0.9954;RSQ=0.9436;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78286183 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9774;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78286194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9996;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78286261 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9992;RSQ=0.9553;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78286264 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9735;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78286287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.757;LDAF=0.0046;AVGPOST=0.9970;RSQ=0.7487;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78286337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3973;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78286339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8563;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78286412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5569;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78286501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0003;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78286685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.9845;AVGPOST=0.9984;RSQ=0.9548;ERATE=0.0005;THETA=0.0004;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 78286712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0029;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78286732 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0060;AVGPOST=0.9969;RSQ=0.7585;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78286765 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4997;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78286774 . TTA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.6915;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78286792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78286810 . GGAGC G 9 PASS INDEL;BAVGPOST=0.997;BRSQ=0.715;LDAF=0.0046;AVGPOST=0.9950;RSQ=0.5797;ERATE=0.0007;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78289303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.837;LDAF=0.0096;AVGPOST=0.9958;RSQ=0.8165;ERATE=0.0004;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78289774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.904;LDAF=0.0344;AVGPOST=0.9973;RSQ=0.9689;ERATE=0.0005;THETA=0.0012;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 78289962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8428;ERATE=0.0007;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78289970 . G GC 228 PASS INDEL;BAVGPOST=0.917;BRSQ=0.295;LDAF=0.1338;AVGPOST=0.8236;RSQ=0.3764;ERATE=0.0184;THETA=0.0005;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 78291038 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8936;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78291327 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78291340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.954;LDAF=0.2249;AVGPOST=0.9810;RSQ=0.9635;ERATE=0.0009;THETA=0.0007;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 78291399 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.939;LDAF=0.0807;AVGPOST=0.9769;RSQ=0.8729;ERATE=0.0009;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 78291417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.680;LDAF=0.0323;AVGPOST=0.9889;RSQ=0.8628;ERATE=0.0007;THETA=0.0015;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78291534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9466;ERATE=0.0003;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78291675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0158;AVGPOST=0.9990;RSQ=0.9759;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78291680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0011;AVGPOST=0.9983;RSQ=0.4127;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78291690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.546;LDAF=0.0071;AVGPOST=0.9932;RSQ=0.6371;ERATE=0.0007;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78291747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0161;AVGPOST=0.9984;RSQ=0.9616;ERATE=0.0005;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78291763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6307;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78291785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.800;LDAF=0.2777;AVGPOST=0.9160;RSQ=0.8510;ERATE=0.0093;THETA=0.0008;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 78291846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.877;BRSQ=0.709;LDAF=0.2385;AVGPOST=0.9034;RSQ=0.8196;ERATE=0.0049;THETA=0.0010;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 78292132 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0206;AVGPOST=0.9896;RSQ=0.7969;ERATE=0.0010;THETA=0.0010;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78292301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0049;AVGPOST=0.9958;RSQ=0.6385;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78292315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.885;LDAF=0.2290;AVGPOST=0.9750;RSQ=0.9474;ERATE=0.0010;THETA=0.0007;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 78292329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.649;LDAF=0.0096;AVGPOST=0.9915;RSQ=0.6338;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78292343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0025;AVGPOST=0.9965;RSQ=0.4318;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78292357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0076;AVGPOST=0.9987;RSQ=0.9190;ERATE=0.0006;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78292359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0039;AVGPOST=0.9988;RSQ=0.8625;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78292367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0067;AVGPOST=0.9967;RSQ=0.8012;ERATE=0.0007;THETA=0.0035;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78292387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0080;AVGPOST=0.9953;RSQ=0.7479;ERATE=0.0008;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78292418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0043;AVGPOST=0.9973;RSQ=0.7197;ERATE=0.0008;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78292438 . CT C 45 PASS INDEL;BAVGPOST=0.994;BRSQ=0.537;LDAF=0.0186;AVGPOST=0.9748;RSQ=0.4568;ERATE=0.0030;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78292483 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0046;AVGPOST=0.9936;RSQ=0.4176;ERATE=0.0014;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78292488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.787;LDAF=0.0086;AVGPOST=0.9908;RSQ=0.5834;ERATE=0.0009;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78292528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0346;AVGPOST=0.9971;RSQ=0.9664;ERATE=0.0006;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 78292534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.758;LDAF=0.0075;AVGPOST=0.9964;RSQ=0.8030;ERATE=0.0005;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78292615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3417;ERATE=0.0005;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78292669 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2359;AVGPOST=0.9956;RSQ=0.9909;ERATE=0.0005;THETA=0.0008;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 78292689 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0164;AVGPOST=0.9991;RSQ=0.9787;ERATE=0.0004;THETA=0.0025;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78292843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5871;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78292881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78292968 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5414;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78293001 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6743;ERATE=0.0006;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78293005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0116;AVGPOST=0.9978;RSQ=0.9329;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78293055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0127;AVGPOST=0.9957;RSQ=0.8575;ERATE=0.0025;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78293074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78293142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4434;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78293143 . AT A 714 PASS INDEL;BAVGPOST=0.997;BRSQ=0.748;LDAF=0.0052;AVGPOST=0.9990;RSQ=0.9219;ERATE=0.0004;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78293190 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3012;AVGPOST=0.9970;RSQ=0.9940;ERATE=0.0005;THETA=0.0006;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 78293199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4315;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78293215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8210;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78293237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78293260 rs35495371 CA C 29707 PASS INDEL;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2857;AVGPOST=0.9882;RSQ=0.9786;ERATE=0.0017;THETA=0.0010;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 78293298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78293322 . AT A 207 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7995;ERATE=0.0005;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78293335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0198;AVGPOST=0.9970;RSQ=0.9356;ERATE=0.0004;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78293386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5568;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78293388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9995;RSQ=0.9869;ERATE=0.0004;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78293411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78293456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0055;AVGPOST=0.9977;RSQ=0.8458;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78293552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5666;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78293553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9983;RSQ=0.9050;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78293566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78293572 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0165;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78293618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1096;AVGPOST=0.9953;RSQ=0.9811;ERATE=0.0004;THETA=0.0005;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 78293744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6457;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78293764 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8444;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78293806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78293829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78293872 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.826;LDAF=0.0083;AVGPOST=0.9941;RSQ=0.7075;ERATE=0.0010;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78293925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=0.9997;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78293929 . C CTGAA 2742 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0173;AVGPOST=0.9983;RSQ=0.9648;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78294056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8412;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78294088 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0059;AVGPOST=0.9973;RSQ=0.8435;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78294292 . ATTTC A 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5441;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78294300 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78294414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.845;LDAF=0.0101;AVGPOST=0.9976;RSQ=0.9061;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78294502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1069;AVGPOST=0.9989;RSQ=0.9949;ERATE=0.0003;THETA=0.0014;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 78294562 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9328;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78294607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2594;AVGPOST=0.9969;RSQ=0.9937;ERATE=0.0004;THETA=0.0005;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 78294715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.924;BRSQ=0.888;LDAF=0.5794;AVGPOST=0.9002;RSQ=0.8754;ERATE=0.0132;THETA=0.0011;AC=1298;AN=2184 GT:DS:GL:BD 0.59432232 1
1 78294846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5945;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78295009 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0200;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0023;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78295124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4953;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78295355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78295356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8673;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78295415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9694;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78295736 . A AATGAAAGG 538 PASS INDEL;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0076;AVGPOST=0.9937;RSQ=0.6893;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78295934 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.579;LDAF=0.0098;AVGPOST=0.9938;RSQ=0.7514;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78295989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8230;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78296066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.810;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7535;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78296576 rs58993525 A AT 24904 PASS INDEL;BAVGPOST=0.952;BRSQ=0.921;LDAF=0.6111;AVGPOST=0.9516;RSQ=0.9299;ERATE=0.0026;THETA=0.0006;AC=1357;AN=2184 GT:DS:GL:BD 0.62133700 1
1 78296614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.671;LDAF=0.0920;AVGPOST=0.9213;RSQ=0.6067;ERATE=0.0329;THETA=0.0006;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 78296714 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8929;ERATE=0.0003;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78296719 . CTTGAT C 703 PASS INDEL;BAVGPOST=0.986;BRSQ=0.441;LDAF=0.0101;AVGPOST=0.9926;RSQ=0.7129;ERATE=0.0006;THETA=0.0038;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78297305 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.863;BRSQ=0.670;LDAF=0.2497;AVGPOST=0.9138;RSQ=0.8511;ERATE=0.0005;THETA=0.0008;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 78297781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4790;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78297993 . AG A 10457 PASS INDEL;BAVGPOST=0.994;BRSQ=0.409;LDAF=0.9933;AVGPOST=0.9935;RSQ=0.5942;ERATE=0.0006;THETA=0.0045;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 78298149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6464;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78298297 . TA T 454 PASS INDEL;BAVGPOST=0.941;BRSQ=0.853;LDAF=0.2315;AVGPOST=0.9613;RSQ=0.9255;ERATE=0.0009;THETA=0.0012;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 78298334 . AG A 19887 PASS INDEL;BAVGPOST=0.973;BRSQ=0.937;LDAF=0.2486;AVGPOST=0.9747;RSQ=0.9531;ERATE=0.0010;THETA=0.0005;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 78298335 . GT G 6542 PASS INDEL;BAVGPOST=0.973;BRSQ=0.937;LDAF=0.2467;AVGPOST=0.9782;RSQ=0.9594;ERATE=0.0004;THETA=0.0005;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 78298337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0579;AVGPOST=0.9975;RSQ=0.9842;ERATE=0.0004;THETA=0.0006;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 78298357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8437;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78298366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9676;ERATE=0.0003;THETA=0.0022;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78298455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0050;AVGPOST=0.9975;RSQ=0.8263;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78298766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0594;AVGPOST=0.9988;RSQ=0.9907;ERATE=0.0005;THETA=0.0059;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 78298779 . AT A 93 PASS INDEL;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.6066;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78298846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6573;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78298919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0114;AVGPOST=0.9983;RSQ=0.9363;ERATE=0.0004;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78298921 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5492;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78298996 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9115;ERATE=0.0004;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78299026 . TA T 8748 PASS INDEL;BAVGPOST=0.953;BRSQ=0.819;LDAF=0.1204;AVGPOST=0.9637;RSQ=0.8802;ERATE=0.0015;THETA=0.0005;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 78299086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0637;AVGPOST=0.9926;RSQ=0.9532;ERATE=0.0006;THETA=0.0011;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 78299161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7381;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78299230 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7789;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78299416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9663;ERATE=0.0003;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78299512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6950;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=1519;AN=2184 GT:DS:GL:BD 0.69551283 1
1 78299709 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4977;AVGPOST=0.9953;RSQ=0.9929;ERATE=0.0008;THETA=0.0003;AC=1086;AN=2184 GT:DS:GL:BD 0.49725273 0
1 78299892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78299908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78299974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78300169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6964;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0003;THETA=0.0009;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 78300356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.693;LDAF=0.0161;AVGPOST=0.9887;RSQ=0.7007;ERATE=0.0008;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78300518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.9156;AVGPOST=0.9913;RSQ=0.9577;ERATE=0.0009;THETA=0.0007;AC=2006;AN=2184 GT:DS:GL:BD 0.91849816 1
1 78300550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4341;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78300716 . AC A 1773 PASS INDEL;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0139;AVGPOST=0.9971;RSQ=0.9164;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78300780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6493;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78300838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8887;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78300847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1680;AVGPOST=0.9980;RSQ=0.9948;ERATE=0.0003;THETA=0.0009;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 78300854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.9190;AVGPOST=0.9964;RSQ=0.9823;ERATE=0.0004;THETA=0.0011;AC=2007;AN=2184 GT:DS:GL:BD 0.91895604 1
1 78300892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78300905 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1685;AVGPOST=0.9981;RSQ=0.9949;ERATE=0.0003;THETA=0.0006;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 78300924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8440;ERATE=0.0010;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78300985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9400;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78301037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78301095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0571;AVGPOST=0.9973;RSQ=0.9822;ERATE=0.0003;THETA=0.0007;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 78301097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0051;AVGPOST=0.9969;RSQ=0.7835;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78301238 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1298;AVGPOST=0.9974;RSQ=0.9920;ERATE=0.0003;THETA=0.0020;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 78301361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8974;ERATE=0.0004;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78301728 . GT G 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78301830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78301856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.3930;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78301884 rs71688546 GCTAA G 17724 PASS INDEL;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1299;AVGPOST=0.9938;RSQ=0.9786;ERATE=0.0007;THETA=0.0013;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 78301957 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4449;ERATE=0.0006;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78301997 . CCA C 631 PASS INDEL;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0069;AVGPOST=0.9985;RSQ=0.9019;ERATE=0.0007;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78302089 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9758;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78302114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.960;LDAF=0.4240;AVGPOST=0.9784;RSQ=0.9669;ERATE=0.0012;THETA=0.0043;AC=933;AN=2184 GT:DS:GL:BD 0.42719781 0
1 78302162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.4359;AVGPOST=0.9770;RSQ=0.9636;ERATE=0.0010;THETA=0.0086;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 78302283 . CATT C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5086;ERATE=0.0006;THETA=0.0134;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78302283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4315;ERATE=0.0004;THETA=0.0170;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78302322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8551;ERATE=0.0003;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78302334 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5295;ERATE=0.0004;THETA=0.0221;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78302353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0101;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78302436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0125;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78302497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5764;ERATE=0.0005;THETA=0.0232;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78302507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9182;ERATE=0.0004;THETA=0.0085;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78302595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4240;ERATE=0.0009;THETA=0.0128;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78302653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0104;AVGPOST=0.9976;RSQ=0.9047;ERATE=0.0006;THETA=0.0121;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78302659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.3683;ERATE=0.0011;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78302668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0128;AVGPOST=0.9979;RSQ=0.9426;ERATE=0.0004;THETA=0.0037;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78302805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7611;ERATE=0.0004;THETA=0.0120;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78302806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6498;ERATE=0.0005;THETA=0.0083;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78302807 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0316;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78303062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0003;THETA=0.0141;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78303082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0083;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78303091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7565;ERATE=0.0003;THETA=0.0193;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78303125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9573;ERATE=0.0003;THETA=0.0134;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78303129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7544;ERATE=0.0003;THETA=0.0097;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78303313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0205;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78303321 . AG A 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.2811;ERATE=0.0006;THETA=0.0164;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78303322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8894;ERATE=0.0003;THETA=0.0226;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78303361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0186;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78303425 . A AG 126 PASS INDEL;BAVGPOST=0.974;BRSQ=0.279;LDAF=0.0391;AVGPOST=0.9369;RSQ=0.2740;ERATE=0.0041;THETA=0.0307;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78303500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4743;ERATE=0.0005;THETA=0.0085;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78303654 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.791;LDAF=0.0069;AVGPOST=0.9968;RSQ=0.7920;ERATE=0.0004;THETA=0.0161;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78303677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.827;LDAF=0.0213;AVGPOST=0.9907;RSQ=0.8224;ERATE=0.0013;THETA=0.0145;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78303683 . AT A 40 PASS INDEL;BAVGPOST=0.981;BRSQ=0.163;LDAF=0.0755;AVGPOST=0.8638;RSQ=0.1495;ERATE=0.0031;THETA=0.0215;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78303753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8349;ERATE=0.0008;THETA=0.0124;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78303830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.766;LDAF=0.9928;AVGPOST=0.9972;RSQ=0.8345;ERATE=0.0028;THETA=0.0306;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 78303831 . T TC 1232 PASS INDEL;BAVGPOST=0.996;BRSQ=0.843;LDAF=0.0115;AVGPOST=0.9942;RSQ=0.7975;ERATE=0.0004;THETA=0.0175;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78303889 . T TC 1248 PASS INDEL;BAVGPOST=0.996;BRSQ=0.843;LDAF=0.0118;AVGPOST=0.9940;RSQ=0.7886;ERATE=0.0004;THETA=0.0186;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78303894 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.862;LDAF=0.0137;AVGPOST=0.9946;RSQ=0.8287;ERATE=0.0023;THETA=0.0183;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78303971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7917;ERATE=0.0003;THETA=0.0271;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78303996 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0118;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78304024 . AG A 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5258;ERATE=0.0004;THETA=0.0164;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78304058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.858;LDAF=0.0223;AVGPOST=0.9925;RSQ=0.8627;ERATE=0.0005;THETA=0.0330;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78304125 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6317;ERATE=0.0003;THETA=0.0208;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78304169 rs111386079 T TG 84379 PASS INDEL;BAVGPOST=0.912;BRSQ=0.841;LDAF=0.7074;AVGPOST=0.9216;RSQ=0.8761;ERATE=0.0009;THETA=0.0011;AC=1579;AN=2184 GT:DS:GL:BD 0.72298533 1
1 78304215 . G GT 23766 PASS INDEL;BAVGPOST=0.898;BRSQ=0.814;LDAF=0.6805;AVGPOST=0.9070;RSQ=0.8543;ERATE=0.0019;THETA=0.0303;AC=1529;AN=2184 GT:DS:GL:BD 0.70009160 1
1 78304218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.748;LDAF=0.8053;AVGPOST=0.9134;RSQ=0.7948;ERATE=0.0175;THETA=0.0208;AC=1804;AN=2184 GT:DS:GL:BD 0.82600731 1
1 78304235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.828;LDAF=0.0073;AVGPOST=0.9957;RSQ=0.7703;ERATE=0.0017;THETA=0.0239;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78304280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9031;ERATE=0.0003;THETA=0.0270;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78304383 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9021;ERATE=0.0003;THETA=0.0241;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78304394 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9639;ERATE=0.0003;THETA=0.0289;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78304400 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0075;AVGPOST=0.9985;RSQ=0.9116;ERATE=0.0003;THETA=0.0113;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78304401 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0125;AVGPOST=0.9982;RSQ=0.9416;ERATE=0.0003;THETA=0.0033;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78304415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3253;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0005;THETA=0.0002;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 78304704 . CAG C 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78304715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78304989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1220;AVGPOST=0.9985;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 78305040 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9729;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78305166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5678;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78305204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78305223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78305431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1652;AVGPOST=0.9976;RSQ=0.9928;ERATE=0.0004;THETA=0.0001;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 78305484 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78305617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78305639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8391;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78305704 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5471;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78305958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8727;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78305959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1910;AVGPOST=0.9971;RSQ=0.9924;ERATE=0.0006;THETA=0.0004;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 78305971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.3233;AVGPOST=0.9605;RSQ=0.9347;ERATE=0.0056;THETA=0.0003;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 78306127 . T TA 150 PASS INDEL;BAVGPOST=0.969;BRSQ=0.533;LDAF=0.0658;AVGPOST=0.9181;RSQ=0.4968;ERATE=0.0077;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78306190 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6761;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78306223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0449;AVGPOST=0.9986;RSQ=0.9887;ERATE=0.0004;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 78306272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9716;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78306357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78306418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9261;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78306453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78306725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78306750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8902;ERATE=0.0008;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78306755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78306757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2765;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0003;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 78306847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9456;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78306853 . AT A 4 PASS INDEL;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5050;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78306910 . GTC G 915 PASS INDEL;BAVGPOST=0.897;BRSQ=0.688;LDAF=0.1702;AVGPOST=0.9079;RSQ=0.7724;ERATE=0.0068;THETA=0.0002;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 78307012 rs5775833 CTCTTT C 30620 PASS INDEL;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.2677;AVGPOST=0.9917;RSQ=0.9842;ERATE=0.0006;THETA=0.0002;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 78307016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0624;AVGPOST=0.9942;RSQ=0.9649;ERATE=0.0004;THETA=0.0005;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 78307217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.626;LDAF=0.1251;AVGPOST=0.8910;RSQ=0.5804;ERATE=0.0417;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 78307264 . G GCA 1333 PASS INDEL;BAVGPOST=0.941;BRSQ=0.635;LDAF=0.1056;AVGPOST=0.9298;RSQ=0.7151;ERATE=0.0088;THETA=0.0012;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 78307264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0071;AVGPOST=0.9952;RSQ=0.7265;ERATE=0.0010;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78307268 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9715;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78307376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2767;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0007;THETA=0.0005;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 78307471 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78307679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3632;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 78307872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78308040 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78308048 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9989;RSQ=0.9669;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78308270 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78308445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78308455 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78308487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.965;LDAF=0.1338;AVGPOST=0.9943;RSQ=0.9808;ERATE=0.0005;THETA=0.0005;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 78308597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.965;LDAF=0.1341;AVGPOST=0.9963;RSQ=0.9874;ERATE=0.0003;THETA=0.0008;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 78308598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5287;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78308665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78308872 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0362;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78308976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5142;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78309032 . ACCT A 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5953;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78309119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0364;AVGPOST=0.9993;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78309168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9597;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78309266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6306;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78309306 . TA T 4815 PASS INDEL;BAVGPOST=0.984;BRSQ=0.966;LDAF=0.3182;AVGPOST=0.9867;RSQ=0.9757;ERATE=0.0018;THETA=0.0003;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 78309316 rs3216612 AT A 39040 PASS INDEL;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.3244;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 78309318 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0442;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 78309668 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.5870;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78309680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.861;LDAF=0.0176;AVGPOST=0.9889;RSQ=0.7748;ERATE=0.0021;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78309861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0055;AVGPOST=0.9922;RSQ=0.4791;ERATE=0.0009;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78309876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3861;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78309952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0379;AVGPOST=0.9987;RSQ=0.9851;ERATE=0.0004;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78309997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6699;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78310019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0380;AVGPOST=0.9987;RSQ=0.9853;ERATE=0.0004;THETA=0.0007;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78310024 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6687;AVGPOST=0.9911;RSQ=0.9849;ERATE=0.0015;THETA=0.0005;AC=1462;AN=2184 GT:DS:GL:BD 0.66941392 1
1 78310037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4917;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78310183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9164;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78310203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.958;LDAF=0.2949;AVGPOST=0.9893;RSQ=0.9828;ERATE=0.0006;THETA=0.0002;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 78310301 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.792;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8243;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78310403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4905;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78310496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78310539 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0385;AVGPOST=0.9977;RSQ=0.9767;ERATE=0.0006;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 78310546 . C CAA 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7213;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78310554 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3243;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 78310606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.941;LDAF=0.0514;AVGPOST=0.9929;RSQ=0.9505;ERATE=0.0003;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 78310803 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.5868;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78310826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.6599;AVGPOST=0.9853;RSQ=0.9745;ERATE=0.0038;THETA=0.0004;AC=1445;AN=2184 GT:DS:GL:BD 0.66163003 1
1 78310858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.678;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8483;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78310996 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0227;AVGPOST=0.9983;RSQ=0.9701;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78311009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7807;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78311121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.3239;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 78311156 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7520;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78311272 . CAA C 1141 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9985;RSQ=0.9319;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78311457 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9263;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78311571 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0351;AVGPOST=0.9989;RSQ=0.9857;ERATE=0.0005;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 78311674 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78311747 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6615;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78311874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5469;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78312077 . C CAT 5166 PASS INDEL;BAVGPOST=0.992;BRSQ=0.879;LDAF=0.0370;AVGPOST=0.9945;RSQ=0.9396;ERATE=0.0006;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78312107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8183;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78312108 . T TAG 904 PASS INDEL;BAVGPOST=0.991;BRSQ=0.846;LDAF=0.0414;AVGPOST=0.9861;RSQ=0.8694;ERATE=0.0006;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 78312117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5258;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78312167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0375;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78312254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6487;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78312274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9160;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78312314 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3235;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 78312586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5770;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78312689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6439;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78312763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0471;AVGPOST=0.9964;RSQ=0.9687;ERATE=0.0009;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78313059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9744;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78313114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6714;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=1465;AN=2184 GT:DS:GL:BD 0.67078757 1
1 78313200 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3239;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0006;THETA=0.0003;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 78313208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3625;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 78313236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8353;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78313263 . GCC G 62 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5607;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78313334 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3240;AVGPOST=0.9971;RSQ=0.9944;ERATE=0.0006;THETA=0.0003;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 78313473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6731;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78313485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6787;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78313643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0379;AVGPOST=0.9991;RSQ=0.9896;ERATE=0.0004;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78313993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78314118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78314146 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78314191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9020;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78314198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6696;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 78314236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3236;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0005;THETA=0.0004;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 78314266 . AAG A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78314274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8269;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78314310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78314495 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0056;AVGPOST=0.9930;RSQ=0.5774;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78314549 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.675;LDAF=0.0325;AVGPOST=0.9926;RSQ=0.9123;ERATE=0.0009;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 78314584 rs35587483 GC G 188 PASS INDEL;BAVGPOST=0.983;BRSQ=0.385;LDAF=0.0109;AVGPOST=0.9925;RSQ=0.7000;ERATE=0.0010;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78314609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.953;LDAF=0.3172;AVGPOST=0.9502;RSQ=0.9132;ERATE=0.0059;THETA=0.0003;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 78314776 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78314852 . T TC 390 PASS INDEL;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0062;AVGPOST=0.9973;RSQ=0.8242;ERATE=0.0007;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78314877 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78314878 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78314939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6898;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78314979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0167;AVGPOST=0.9979;RSQ=0.9473;ERATE=0.0005;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78314987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7096;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78314992 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7986;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78315018 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6993;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78315110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0249;AVGPOST=0.9992;RSQ=0.9852;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78315126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4207;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0008;THETA=0.0012;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 78315146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6374;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78315248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8553;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78315368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.969;LDAF=0.0463;AVGPOST=0.9982;RSQ=0.9846;ERATE=0.0003;THETA=0.0006;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 78315427 . G GC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78315431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8902;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78315447 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78315475 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.986;LDAF=0.5525;AVGPOST=0.9848;RSQ=0.9804;ERATE=0.0046;THETA=0.0009;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 78315483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0427;AVGPOST=0.9962;RSQ=0.9635;ERATE=0.0008;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 78315501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0040;AVGPOST=0.9997;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78315555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8029;ERATE=0.0014;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78315698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78315736 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8472;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78315786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78315792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78315864 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78315903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.0952;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78315908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9185;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78316074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.8224;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78316125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0069;AVGPOST=0.9970;RSQ=0.8317;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78316188 . T TA 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78316191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.5548;AVGPOST=0.9881;RSQ=0.9834;ERATE=0.0039;THETA=0.0007;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 78316273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7710;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78316311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78316328 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0499;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 78316356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8599;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78316380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0499;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 78316386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7794;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78316477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8067;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78316515 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78316516 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78316566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78316604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0637;AVGPOST=0.9983;RSQ=0.9909;ERATE=0.0003;THETA=0.0027;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 78316963 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9735;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78317100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0499;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 78317115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.944;LDAF=0.0623;AVGPOST=0.9962;RSQ=0.9782;ERATE=0.0004;THETA=0.0006;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 78317119 rs34784966 TTTA T 51052 PASS INDEL;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.5012;AVGPOST=0.9923;RSQ=0.9894;ERATE=0.0012;THETA=0.0003;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 78317257 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9990;RSQ=0.9459;ERATE=0.0005;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78317292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78317410 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78317421 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8510;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78317443 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7621;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78317518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9828;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78317556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78317936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4273;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78317990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8210;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78318026 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78318173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6312;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78318190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0307;AVGPOST=0.9994;RSQ=0.9905;ERATE=0.0003;THETA=0.0043;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78318273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.843;LDAF=0.0185;AVGPOST=0.9872;RSQ=0.7164;ERATE=0.0051;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78318317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5215;AVGPOST=0.9952;RSQ=0.9934;ERATE=0.0004;THETA=0.0009;AC=1140;AN=2184 GT:DS:GL:BD 0.52197802 1
1 78318447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78318504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5560;ERATE=0.0008;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78318623 . CAG C 673 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78318665 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0085;AVGPOST=0.9978;RSQ=0.9190;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78318683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5825;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78318854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0084;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78318971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.2636;AVGPOST=0.9849;RSQ=0.9723;ERATE=0.0061;THETA=0.0003;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 78319093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8480;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78319105 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0482;AVGPOST=0.9989;RSQ=0.9907;ERATE=0.0004;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 78319160 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78319333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78319453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0304;AVGPOST=0.9994;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 78319575 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.874;LDAF=0.0145;AVGPOST=0.9974;RSQ=0.9260;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78319587 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0484;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0004;THETA=0.0007;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78319605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0483;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78319706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6879;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78319709 . TA T 353 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78319716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5796;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78319740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9359;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78319744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9391;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78319745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0487;AVGPOST=0.9991;RSQ=0.9925;ERATE=0.0004;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78319823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7476;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78319862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78320127 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78320321 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8358;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78320342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0510;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78320379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0071;AVGPOST=0.9959;RSQ=0.8004;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78320381 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9292;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78320420 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.923;LDAF=0.0147;AVGPOST=0.9949;RSQ=0.8635;ERATE=0.0010;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78320550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9134;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78320616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78320670 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78320699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7236;ERATE=0.0008;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78320758 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78320848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6656;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78321193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5505;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78321200 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0173;AVGPOST=0.9996;RSQ=0.9912;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78321224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0098;AVGPOST=0.9979;RSQ=0.9222;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78321272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2941;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 78321320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0094;AVGPOST=0.9977;RSQ=0.8998;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78321327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4648;AVGPOST=0.9953;RSQ=0.9933;ERATE=0.0008;THETA=0.0006;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 78321341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0105;AVGPOST=0.9974;RSQ=0.8994;ERATE=0.0004;THETA=0.0021;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78321421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.8159;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78321506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5605;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78321575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78321718 . CA C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6418;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78321772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6605;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78321853 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4042;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 78321855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1104;AVGPOST=0.9987;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 78321863 rs79482913 A AT 11981 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1104;AVGPOST=0.9982;RSQ=0.9931;ERATE=0.0004;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 78321925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78322014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5928;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78322017 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78322145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8831;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78322284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9992;RSQ=0.9556;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78322384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9983;RSQ=0.9163;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78322444 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.844;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9217;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78322531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6246;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78322763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6073;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78322843 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5867;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78322886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9808;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78323014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2811;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0006;THETA=0.0003;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 78323088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8314;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78323121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78323175 . A ATG 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6875;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78323191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78323205 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9315;ERATE=0.0003;THETA=0.0032;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78323246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4638;AVGPOST=0.9976;RSQ=0.9965;ERATE=0.0004;THETA=0.0008;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 78323254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78323280 . TA T 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5852;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78323286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.9802;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0003;THETA=0.0011;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 78323359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9381;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78323405 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0885;AVGPOST=0.9988;RSQ=0.9946;ERATE=0.0003;THETA=0.0008;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 78323512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.0075;AVGPOST=0.9979;RSQ=0.8993;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78323513 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9381;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78323560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7665;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78323611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78323639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78323818 . CAATT C 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78323936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78324003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8707;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78324034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6769;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78324148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8127;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78324332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78324369 . G GGAGAAATC 2424 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0068;AVGPOST=0.9986;RSQ=0.9173;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78324428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7576;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78324556 . TA T 182 PASS INDEL;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0034;AVGPOST=0.9959;RSQ=0.5246;ERATE=0.0015;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78324621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78324705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78324790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9065;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78325043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0886;AVGPOST=0.9987;RSQ=0.9942;ERATE=0.0004;THETA=0.0002;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 78325097 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5432;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78325105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78325109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78325267 . GT G 232 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78325304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5746;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78325416 rs74652839 CTGTGG C 1217 PASS INDEL;BAVGPOST=0.995;BRSQ=0.793;LDAF=0.0119;AVGPOST=0.9933;RSQ=0.7890;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78325854 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6845;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78325921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78326194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3010;AVGPOST=0.9975;RSQ=0.9955;ERATE=0.0006;THETA=0.0003;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 78326203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0077;AVGPOST=0.9992;RSQ=0.9492;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78326269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7692;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78326311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.3015;AVGPOST=0.9953;RSQ=0.9914;ERATE=0.0009;THETA=0.0005;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 78326335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.957;LDAF=0.3823;AVGPOST=0.9735;RSQ=0.9591;ERATE=0.0029;THETA=0.0003;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 78326398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0047;AVGPOST=0.9967;RSQ=0.7276;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78326430 . A AT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7089;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78326567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0029;AVGPOST=0.9957;RSQ=0.4500;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78326606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9994;RSQ=0.9769;ERATE=0.0003;THETA=0.0028;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78326614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.998;LDAF=0.3024;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0005;THETA=0.0006;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 78326648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6936;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78327016 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78327106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9456;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78327110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3025;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0005;THETA=0.0009;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 78327142 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78327208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5104;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78327227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78327257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8639;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78327366 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78327507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78327561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78327628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8117;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78327660 . CT C 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0014;AVGPOST=0.9978;RSQ=0.3704;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78327762 . C CT 253 PASS INDEL;BAVGPOST=0.982;BRSQ=0.480;LDAF=0.0299;AVGPOST=0.9646;RSQ=0.5213;ERATE=0.0104;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78327776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3029;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 78327902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3017;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0009;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 78327976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78328221 . CAG C 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6100;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78328309 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78328310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3016;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 78328373 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9635;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78328386 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.6218;ERATE=0.0008;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78328410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78328563 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78328668 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0506;AVGPOST=0.9985;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 78328724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4194;AVGPOST=0.9956;RSQ=0.9938;ERATE=0.0006;THETA=0.0003;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 78328802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78328818 rs35418951 CT C 16050 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1390;AVGPOST=0.9917;RSQ=0.9756;ERATE=0.0017;THETA=0.0004;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 78328860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8208;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78328947 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78329048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.7156;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78329137 . GCA G 393 PASS INDEL;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8435;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78329278 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78329296 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8607;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78329501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4191;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 78329514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1377;AVGPOST=0.9973;RSQ=0.9919;ERATE=0.0007;THETA=0.0011;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 78329554 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78329644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78329960 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78329973 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5110;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78330189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78330233 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6607;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78330335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78330438 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9337;ERATE=0.0003;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78330442 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0464;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0002;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 78330463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4120;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 78330506 . CCAAA C 11527 PASS INDEL;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0551;AVGPOST=0.9989;RSQ=0.9925;ERATE=0.0004;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 78330509 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7676;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78330653 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78330662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9085;ERATE=0.0002;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78330868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.1528;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78330927 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9563;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78330958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5589;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78330979 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8982;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78331068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5855;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78331115 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2442;AVGPOST=0.9973;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 78331164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9619;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78331186 . AAAT A 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8101;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78331332 . ATAAT A 727 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8004;ERATE=0.0003;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78331334 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0550;AVGPOST=0.9985;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 78331339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0205;AVGPOST=0.9992;RSQ=0.9877;ERATE=0.0002;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78331355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0151;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78331660 . C CA 6990 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0558;AVGPOST=0.9988;RSQ=0.9918;ERATE=0.0004;THETA=0.0004;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 78331747 . CAG C 687 PASS INDEL;BAVGPOST=0.953;BRSQ=0.539;LDAF=0.1106;AVGPOST=0.8694;RSQ=0.4464;ERATE=0.0245;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 78331828 . A AAGGG 1768 PASS INDEL;BAVGPOST=0.934;BRSQ=0.708;LDAF=0.1620;AVGPOST=0.8885;RSQ=0.7244;ERATE=0.0049;THETA=0.0003;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 78331900 . A AT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.672;LDAF=0.0032;AVGPOST=0.9946;RSQ=0.3691;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78332039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0467;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 78332293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6517;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78332304 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5938;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78332320 . AT A 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7119;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78332407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.941;LDAF=0.0496;AVGPOST=0.9885;RSQ=0.9192;ERATE=0.0006;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78332462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0478;AVGPOST=0.9989;RSQ=0.9915;ERATE=0.0002;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78332551 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8868;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78332565 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0144;AVGPOST=0.9973;RSQ=0.9307;ERATE=0.0004;THETA=0.0001;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78332606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0488;AVGPOST=0.9991;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78332608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9571;AVGPOST=0.9982;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=2089;AN=2184 GT:DS:GL:BD 0.95650184 1
1 78332635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0143;AVGPOST=0.9975;RSQ=0.9318;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78332649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0479;AVGPOST=0.9981;RSQ=0.9845;ERATE=0.0004;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 78332667 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0163;AVGPOST=0.9972;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78332689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78332697 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9497;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78332764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9534;AVGPOST=0.9914;RSQ=0.9204;ERATE=0.0008;THETA=0.0003;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 78332842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5526;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78332930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0313;AVGPOST=0.9986;RSQ=0.9832;ERATE=0.0003;THETA=0.0001;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78332974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78333024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0126;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78333172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78333218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9241;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78333285 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2437;AVGPOST=0.9963;RSQ=0.9935;ERATE=0.0005;THETA=0.0003;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 78333298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9997;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78333468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8650;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78333537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7140;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78333559 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0481;AVGPOST=0.9970;RSQ=0.9795;ERATE=0.0005;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 78333595 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1459;AVGPOST=0.9981;RSQ=0.9935;ERATE=0.0005;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 78333612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1300;AVGPOST=0.9979;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 78333633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9258;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78333966 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9398;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78333978 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5762;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78334081 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 78334131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0479;AVGPOST=0.9973;RSQ=0.9803;ERATE=0.0007;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 78334149 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0624;AVGPOST=0.9990;RSQ=0.9921;ERATE=0.0003;THETA=0.0001;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 78334158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0467;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 78334295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0218;AVGPOST=0.9970;RSQ=0.9504;ERATE=0.0004;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78334358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0110;AVGPOST=0.9941;RSQ=0.7943;ERATE=0.0006;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78334425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5444;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78334698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9569;AVGPOST=0.9979;RSQ=0.9788;ERATE=0.0004;THETA=0.0004;AC=2089;AN=2184 GT:DS:GL:BD 0.95650184 1
1 78334782 . G GA 95 PASS INDEL;BAVGPOST=0.985;BRSQ=0.578;LDAF=0.0361;AVGPOST=0.9538;RSQ=0.4812;ERATE=0.0079;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78334801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.542;LDAF=0.0219;AVGPOST=0.9740;RSQ=0.5356;ERATE=0.0072;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78334803 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1462;AVGPOST=0.9981;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 78334842 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0474;AVGPOST=0.9992;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78334903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.9069;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78334944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6166;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78335096 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0468;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 78335134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6965;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78335152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9564;ERATE=0.0003;THETA=0.0025;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78335320 . AC A 9410 PASS INDEL;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1244;AVGPOST=0.9964;RSQ=0.9864;ERATE=0.0007;THETA=0.0003;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 78335363 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.897;LDAF=0.1057;AVGPOST=0.9778;RSQ=0.9192;ERATE=0.0043;THETA=0.0007;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 78335364 rs59798403 CA C 542 PASS INDEL;BAVGPOST=0.981;BRSQ=0.921;LDAF=0.1200;AVGPOST=0.9907;RSQ=0.9676;ERATE=0.0006;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 78335364 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8594;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78335407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2227;AVGPOST=0.9883;RSQ=0.9768;ERATE=0.0011;THETA=0.0002;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 78335466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1229;AVGPOST=0.9984;RSQ=0.9941;ERATE=0.0004;THETA=0.0002;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 78335543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0141;AVGPOST=0.9993;RSQ=0.9788;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78335548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.6053;ERATE=0.0008;THETA=0.0044;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78335569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78335624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.7482;AVGPOST=0.9940;RSQ=0.9871;ERATE=0.0007;THETA=0.0002;AC=1636;AN=2184 GT:DS:GL:BD 0.74908423 1
1 78335702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0066;AVGPOST=0.9967;RSQ=0.7987;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78335721 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8003;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78335787 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2508;AVGPOST=0.9976;RSQ=0.9948;ERATE=0.0008;THETA=0.0002;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 78335864 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0094;AVGPOST=0.9965;RSQ=0.8402;ERATE=0.0004;THETA=0.0024;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78335879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7193;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78335887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78335915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.8148;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78335988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78336131 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2538;AVGPOST=0.9981;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 78336242 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8814;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78336408 rs17878958 GA G 496 PASS INDEL;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0084;AVGPOST=0.9966;RSQ=0.8260;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78336580 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0027;AVGPOST=0.9971;RSQ=0.6238;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78336632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8729;ERATE=0.0009;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78336633 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8433;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78336651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9209;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78336702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8510;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78336720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.810;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7421;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78336731 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7439;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78336751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78336798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8601;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78336859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78336926 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9195;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78336974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1183;AVGPOST=0.9974;RSQ=0.9911;ERATE=0.0003;THETA=0.0002;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 78336987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5835;AVGPOST=0.9966;RSQ=0.9942;ERATE=0.0005;THETA=0.0003;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 78336992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8586;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78337004 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9902;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78337090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78337222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9539;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78337247 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8809;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78337458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9151;ERATE=0.0003;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78337510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78337599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78337608 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9082;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78337758 . GCAT G 295 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78337870 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7125;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78337981 rs3834074 CAAT C 2622 PASS INDEL;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0211;AVGPOST=0.9968;RSQ=0.9404;ERATE=0.0005;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78338186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6659;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78338260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2433;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 78338297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9061;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=1979;AN=2184 GT:DS:GL:BD 0.90613556 1
1 78338307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78338465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78338649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6551;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78338737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78338945 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7177;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78339052 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78339163 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78339190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.548;LDAF=0.0073;AVGPOST=0.9957;RSQ=0.7599;ERATE=0.0008;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78339344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5196;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78339638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.889;LDAF=0.8509;AVGPOST=0.9278;RSQ=0.7951;ERATE=0.0067;THETA=0.0003;AC=1897;AN=2184 GT:DS:GL:BD 0.86858976 1
1 78339730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4833;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78339835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.499;LDAF=0.0049;AVGPOST=0.9950;RSQ=0.5461;ERATE=0.0008;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78339899 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2638;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0006;THETA=0.0004;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 78340015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3669;AVGPOST=0.9976;RSQ=0.9952;ERATE=0.0006;THETA=0.0002;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 78340124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1721;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 78340125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0354;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 78340153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5405;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78340192 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78340316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78340319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78340360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5286;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78340450 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4624;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78340528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9918;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78340803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78340878 . ATCT A 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4846;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78340946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7928;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78340949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78341008 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9860;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78341026 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.792;LDAF=0.0268;AVGPOST=0.9858;RSQ=0.7940;ERATE=0.0007;THETA=0.0013;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78341144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.684;LDAF=0.8794;AVGPOST=0.9665;RSQ=0.8750;ERATE=0.0019;THETA=0.0006;AC=1923;AN=2184 GT:DS:GL:BD 0.88049453 1
1 78341163 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.6808;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78341186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8076;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78341270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.479;LDAF=0.0140;AVGPOST=0.9804;RSQ=0.4769;ERATE=0.0013;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78341294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.716;LDAF=0.0200;AVGPOST=0.9883;RSQ=0.7664;ERATE=0.0010;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78341295 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9131;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78341328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8414;ERATE=0.0004;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78341384 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8588;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78341529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.708;LDAF=0.0046;AVGPOST=0.9961;RSQ=0.6665;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78341650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0838;AVGPOST=0.9990;RSQ=0.9951;ERATE=0.0003;THETA=0.0006;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 78341759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78341807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0091;AVGPOST=0.9960;RSQ=0.8198;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78341919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.8094;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78341931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0269;AVGPOST=0.9982;RSQ=0.9788;ERATE=0.0004;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 78342027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0111;AVGPOST=0.9993;RSQ=0.9720;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78342038 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.882;LDAF=0.0098;AVGPOST=0.9975;RSQ=0.9029;ERATE=0.0005;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78342173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8664;ERATE=0.0004;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78342179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8530;ERATE=0.0004;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78342191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9370;AVGPOST=0.9991;RSQ=0.9933;ERATE=0.0004;THETA=0.0008;AC=2047;AN=2184 GT:DS:GL:BD 0.93727106 1
1 78342232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.9010;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78342273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0060;AVGPOST=0.9985;RSQ=0.8948;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78342302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6245;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78342513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7280;ERATE=0.0005;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78342525 rs72539462 CATATT C 19008 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0860;AVGPOST=0.9940;RSQ=0.9710;ERATE=0.0007;THETA=0.0037;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 78342530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78342639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4200;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78342673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6078;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78342756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9081;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78342921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78342928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78342994 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.9378;AVGPOST=0.9989;RSQ=0.9915;ERATE=0.0004;THETA=0.0009;AC=2048;AN=2184 GT:DS:GL:BD 0.93772894 1
1 78343114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78343188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78343197 . T TA 129 PASS INDEL;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0031;AVGPOST=0.9960;RSQ=0.4727;ERATE=0.0007;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78343578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9282;ERATE=0.0004;THETA=0.0026;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78343633 . ATATT A 10 PASS INDEL;BAVGPOST=0.990;BRSQ=0.223;LDAF=0.0040;AVGPOST=0.9953;RSQ=0.5216;ERATE=0.0005;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78343948 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4744;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78343971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9638;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78344044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4912;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78344123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8676;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78344155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0073;AVGPOST=0.9984;RSQ=0.9140;ERATE=0.0003;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78344396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0036;AVGPOST=0.9952;RSQ=0.5863;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78344475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78344578 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78344597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78344604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6270;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78344645 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78344722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9363;AVGPOST=0.9977;RSQ=0.9862;ERATE=0.0003;THETA=0.0008;AC=2044;AN=2184 GT:DS:GL:BD 0.93589741 1
1 78344752 . AT A 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4808;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78344836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0099;AVGPOST=0.9974;RSQ=0.9049;ERATE=0.0005;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78344957 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5874;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78345001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78345003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78345044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7968;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78345067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.584;LDAF=0.0058;AVGPOST=0.9962;RSQ=0.7175;ERATE=0.0007;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78345079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78345224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9343;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78345263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78345459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78345614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78345615 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78345962 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9858;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78345973 . GGA G 55 PASS INDEL;BAVGPOST=0.992;BRSQ=0.756;LDAF=0.0224;AVGPOST=0.9797;RSQ=0.6185;ERATE=0.0112;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78345975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1855;AVGPOST=0.9942;RSQ=0.9862;ERATE=0.0018;THETA=0.0003;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 78346029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78346131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1836;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 78346168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9858;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78346189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78346224 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78346346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78346383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3915;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78346459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4209;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78346477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78346534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7809;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78346771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1832;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 78346823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78346835 . C CT 63 PASS INDEL;BAVGPOST=0.982;BRSQ=0.464;LDAF=0.0315;AVGPOST=0.9586;RSQ=0.4637;ERATE=0.0088;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78346891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78346975 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7217;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78346983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78347106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6739;AVGPOST=0.9952;RSQ=0.9918;ERATE=0.0004;THETA=0.0003;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 78347125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5905;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78347307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0056;AVGPOST=0.9992;RSQ=0.9390;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78347322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6128;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78347350 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78347360 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.390;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5627;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78347417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1832;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 78347497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9621;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78347559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78347597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1838;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 78347730 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0084;AVGPOST=0.9961;RSQ=0.8003;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78347744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.3232;AVGPOST=0.9958;RSQ=0.9929;ERATE=0.0005;THETA=0.0005;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 78347803 . T TG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6698;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78347963 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7670;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78347969 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6525;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78348009 . C CTCCTTGG 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78348118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8917;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78348263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1457;AVGPOST=0.9978;RSQ=0.9930;ERATE=0.0005;THETA=0.0005;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 78348293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1828;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 78348350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6856;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78348356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4692;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78348511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78348656 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7029;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78348677 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.6668;AVGPOST=0.9896;RSQ=0.9833;ERATE=0.0012;THETA=0.0005;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 78348696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.697;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4356;ERATE=0.0006;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78348740 . AC A 1995 PASS INDEL;BAVGPOST=0.987;BRSQ=0.782;LDAF=0.0290;AVGPOST=0.9884;RSQ=0.8451;ERATE=0.0008;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78348761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.594;LDAF=0.0054;AVGPOST=0.9934;RSQ=0.5451;ERATE=0.0011;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78348831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78348862 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0033;AVGPOST=0.9975;RSQ=0.6892;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78348864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6714;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78348886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0051;AVGPOST=0.9991;RSQ=0.9261;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78348923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9988;RSQ=0.9776;ERATE=0.0004;THETA=0.0014;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78348930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9986;RSQ=0.9499;ERATE=0.0004;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78348977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0725;AVGPOST=0.9966;RSQ=0.9822;ERATE=0.0003;THETA=0.0003;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 78348979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5540;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78349025 . TG T 11987 PASS INDEL;BAVGPOST=0.971;BRSQ=0.871;LDAF=0.0986;AVGPOST=0.9932;RSQ=0.9700;ERATE=0.0006;THETA=0.0006;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 78349076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78349129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9109;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78349309 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.934;LDAF=0.0570;AVGPOST=0.9984;RSQ=0.9878;ERATE=0.0004;THETA=0.0006;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 78349353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0113;AVGPOST=0.9970;RSQ=0.8965;ERATE=0.0008;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78349570 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6721;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78349610 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78349654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6007;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78349744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1840;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 78349968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8340;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78349988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6474;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78350012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7671;ERATE=0.0004;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78350023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6914;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78350097 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1839;AVGPOST=0.9988;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 78350125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1838;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 78350203 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0769;AVGPOST=0.9987;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 78350221 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0640;AVGPOST=0.9972;RSQ=0.9832;ERATE=0.0005;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 78350253 . T TTG 357 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0058;AVGPOST=0.9977;RSQ=0.8703;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78350286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0066;AVGPOST=0.9954;RSQ=0.7286;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78350306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0127;AVGPOST=0.9950;RSQ=0.8446;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78350395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.499;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7094;ERATE=0.0004;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78350443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9534;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78350467 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6880;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78350588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78350599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1612;AVGPOST=0.9968;RSQ=0.9905;ERATE=0.0008;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 78350600 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0487;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78350698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78350766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8136;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78350791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78350837 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78350869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78350913 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4029;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78350914 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78350928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7974;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78351149 . ACAC A 6769 PASS INDEL;BAVGPOST=0.894;BRSQ=0.722;LDAF=0.2169;AVGPOST=0.8795;RSQ=0.7208;ERATE=0.0153;THETA=0.0003;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 78351184 . AC A 9969 PASS INDEL;BAVGPOST=0.919;BRSQ=0.779;LDAF=0.2317;AVGPOST=0.8952;RSQ=0.7731;ERATE=0.0173;THETA=0.0004;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 78351186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78351254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0269;AVGPOST=0.9969;RSQ=0.9551;ERATE=0.0005;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78351335 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0034;AVGPOST=0.9962;RSQ=0.5341;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78351515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.535;LDAF=0.0040;AVGPOST=0.9949;RSQ=0.4568;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78351577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9766;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78351730 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1013;AVGPOST=0.9991;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 78351775 . GGTT G 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4305;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78352015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.9017;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78352089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78352114 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5496;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78352150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8845;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78352168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0971;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 78352217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1505;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 78352336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78352514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6950;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78352598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78352705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78352726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78352802 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78352828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78352902 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78352932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78352942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0325;AVGPOST=0.9991;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 78353385 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78353660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0322;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0003;THETA=0.0032;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78353695 . T TA 772 PASS INDEL;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9220;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78353735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78353927 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78354036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78354037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78354065 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78354070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78354078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78354114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5036;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 78354174 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78354215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0650;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 78354305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78354328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0494;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 78354334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0326;AVGPOST=0.9997;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 78354400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0210;AVGPOST=0.9991;RSQ=0.9823;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78354459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5972;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78354650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.920;LDAF=0.0136;AVGPOST=0.9971;RSQ=0.9187;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78354653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5470;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78354860 . C CT 1916 PASS INDEL;BAVGPOST=0.985;BRSQ=0.872;LDAF=0.0706;AVGPOST=0.9671;RSQ=0.8056;ERATE=0.0076;THETA=0.0003;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 78355021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4650;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78355075 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78355076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0316;AVGPOST=0.9983;RSQ=0.9754;ERATE=0.0005;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78355091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0192;AVGPOST=0.9990;RSQ=0.9759;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78355149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.4297;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78355160 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0168;AVGPOST=0.9989;RSQ=0.9770;ERATE=0.0002;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78355307 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0143;AVGPOST=0.9989;RSQ=0.9625;ERATE=0.0005;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78355382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78355403 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.6447;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78355410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7337;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78355427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2007;AVGPOST=0.9918;RSQ=0.9807;ERATE=0.0011;THETA=0.0002;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 78355448 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0160;AVGPOST=0.9972;RSQ=0.9308;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78355516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.696;LDAF=0.0066;AVGPOST=0.9938;RSQ=0.6442;ERATE=0.0003;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78355526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7859;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78355591 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5402;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78355614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1544;AVGPOST=0.9971;RSQ=0.9929;ERATE=0.0003;THETA=0.0005;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 78355623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0205;AVGPOST=0.9971;RSQ=0.9464;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78355630 . CT C 175 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.7897;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78355729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7822;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78355751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9993;RSQ=0.9819;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78355853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8160;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78356017 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0253;AVGPOST=0.9987;RSQ=0.9823;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78356042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.8022;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78356099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7939;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78356101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6564;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78356126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.833;LDAF=0.0282;AVGPOST=0.9942;RSQ=0.9213;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78356185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78356228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0271;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78356237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78356275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9149;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78356314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8519;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78356366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.4991;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78356383 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0128;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78356395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78356410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9996;RSQ=0.9853;ERATE=0.0002;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78356420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5801;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78356443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5261;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78356523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78356650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78356868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6038;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78356918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8619;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78357042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1795;AVGPOST=0.9970;RSQ=0.9915;ERATE=0.0005;THETA=0.0005;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 78357318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6587;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78357419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8773;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78357566 . CA C 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78357586 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0033;AVGPOST=0.9983;RSQ=0.8475;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78357741 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1672;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 78358256 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0179;AVGPOST=0.9980;RSQ=0.9606;ERATE=0.0002;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78358474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0022;AVGPOST=0.9972;RSQ=0.5319;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78358544 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78358595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2008;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0005;THETA=0.0002;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 78358721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78358829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78358843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6807;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78358921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8248;AVGPOST=0.9949;RSQ=0.9865;ERATE=0.0006;THETA=0.0004;AC=1803;AN=2184 GT:DS:GL:BD 0.82554942 1
1 78358968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.766;LDAF=0.0124;AVGPOST=0.9976;RSQ=0.9151;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78358973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7243;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78358983 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5326;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78359033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78359047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78359069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78359288 . G GAGTA 501 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6983;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78359318 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2577;AVGPOST=0.9939;RSQ=0.9873;ERATE=0.0013;THETA=0.0002;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 78359558 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6546;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=1431;AN=2184 GT:DS:GL:BD 0.65521979 1
1 78359615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78359839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0407;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 78359904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78359962 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6964;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78360115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78360249 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78360261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1456;AVGPOST=0.9982;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 78360278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7629;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 78360357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8469;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78360493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78360555 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9913;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78360566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78360625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9521;AVGPOST=0.9981;RSQ=0.9879;ERATE=0.0002;THETA=0.0003;AC=2079;AN=2184 GT:DS:GL:BD 0.95192307 1
1 78360871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1646;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 78360879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78360935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78360997 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0647;AVGPOST=0.9950;RSQ=0.9688;ERATE=0.0004;THETA=0.0006;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 78361033 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7687;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78361041 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9698;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78361381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0114;AVGPOST=0.9983;RSQ=0.9431;ERATE=0.0004;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78361518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.6338;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78361563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8382;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78361696 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9386;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78361741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7782;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78361769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0270;AVGPOST=0.9990;RSQ=0.9835;ERATE=0.0004;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78361877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.609;LDAF=0.0546;AVGPOST=0.9288;RSQ=0.4889;ERATE=0.0078;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 78361914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.721;LDAF=0.0078;AVGPOST=0.9930;RSQ=0.6643;ERATE=0.0007;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78361958 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78362066 . CT C 38 PASS INDEL;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.4308;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78362089 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7629;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 78362153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5240;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78362386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7166;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78362530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7624;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=1666;AN=2184 GT:DS:GL:BD 0.76282054 1
1 78362567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8464;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78362572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9086;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78362649 . T TG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5033;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78362820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8675;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78362846 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5935;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78362847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7620;AVGPOST=0.9966;RSQ=0.9940;ERATE=0.0009;THETA=0.0012;AC=1665;AN=2184 GT:DS:GL:BD 0.76236266 1
1 78362851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8233;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78362995 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9409;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78363040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78363053 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78363364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8141;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78363366 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78363392 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9789;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78363587 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7309;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78364000 . AC A 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4651;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78364220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5874;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78364235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6592;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78364262 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7478;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78364283 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9470;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78364309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.847;LDAF=0.0074;AVGPOST=0.9964;RSQ=0.8019;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78364446 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0108;AVGPOST=0.9983;RSQ=0.9334;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78364638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.907;LDAF=0.0178;AVGPOST=0.9980;RSQ=0.9558;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78364662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5904;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78364726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78364833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0220;AVGPOST=0.9988;RSQ=0.9782;ERATE=0.0002;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78364859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78364912 . G GA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78364959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5465;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78364979 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8254;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78365011 . A AG 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8268;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78365020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1400;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 78365143 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.920;LDAF=0.0218;AVGPOST=0.9964;RSQ=0.9323;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78365203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78365315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0212;AVGPOST=0.9995;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78365450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9764;ERATE=0.0004;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78365482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7439;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78365522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7784;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78365547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78365712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5887;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78366014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78366071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6692;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78366287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78366289 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78366388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7402;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78366454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78366521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78366580 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6671;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78366599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9504;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78366741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78366834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5894;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78366948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9334;AVGPOST=0.9979;RSQ=0.9875;ERATE=0.0004;THETA=0.0009;AC=2037;AN=2184 GT:DS:GL:BD 0.93269229 1
1 78366992 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8054;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78367080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9333;AVGPOST=0.9989;RSQ=0.9919;ERATE=0.0003;THETA=0.0015;AC=2039;AN=2184 GT:DS:GL:BD 0.93360806 1
1 78367172 . T TAC 711 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0068;AVGPOST=0.9978;RSQ=0.8520;ERATE=0.0006;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78367199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9996;RSQ=0.9879;ERATE=0.0004;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78367248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9700;ERATE=0.0004;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78367265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0434;AVGPOST=0.9939;RSQ=0.9448;ERATE=0.0004;THETA=0.0008;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 78367286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9278;ERATE=0.0004;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78367385 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0012;AVGPOST=0.9981;RSQ=0.4172;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78367396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9430;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78367452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5586;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78367541 . GC G 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78367625 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9241;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78367815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9029;AVGPOST=0.9984;RSQ=0.9928;ERATE=0.0004;THETA=0.0012;AC=1973;AN=2184 GT:DS:GL:BD 0.90338826 1
1 78367859 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78367862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6644;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78367912 . G GA 66 PASS INDEL;BAVGPOST=0.988;BRSQ=0.508;LDAF=0.0237;AVGPOST=0.9698;RSQ=0.4818;ERATE=0.0077;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78367938 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7368;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78367995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5298;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78368111 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9769;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78368118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0100;AVGPOST=0.9982;RSQ=0.9323;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78368139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78368145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78368187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78368240 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0075;AVGPOST=0.9992;RSQ=0.9533;ERATE=0.0004;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78368257 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78368278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8531;AVGPOST=0.9973;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=1863;AN=2184 GT:DS:GL:BD 0.85302198 1
1 78368540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8809;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78368541 . CT C 1343 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0195;AVGPOST=0.9992;RSQ=0.9830;ERATE=0.0004;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78368550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0196;AVGPOST=0.9989;RSQ=0.9762;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78368594 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78368596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7051;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78368644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78368669 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6822;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78368692 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78368702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78368836 . CAT C 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6524;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78368846 . TTAA T 149 PASS INDEL;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6226;ERATE=0.0004;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78369021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0025;AVGPOST=0.9958;RSQ=0.3530;ERATE=0.0008;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78369058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0230;AVGPOST=0.9928;RSQ=0.8699;ERATE=0.0008;THETA=0.0016;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78369164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.4429;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78369257 . A AT 376 PASS INDEL;BAVGPOST=0.998;BRSQ=0.679;LDAF=0.0098;AVGPOST=0.9887;RSQ=0.5762;ERATE=0.0008;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78369281 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78369362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78369640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4932;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78369655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8649;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78369860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78369893 . CACAT C 230 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78369904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8912;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78369917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6162;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78369918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.510;LDAF=0.0118;AVGPOST=0.9824;RSQ=0.4349;ERATE=0.0041;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78369930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.518;LDAF=0.0105;AVGPOST=0.9876;RSQ=0.5674;ERATE=0.0016;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78369931 . GCA G 56 PASS INDEL;BAVGPOST=0.994;BRSQ=0.649;LDAF=0.0204;AVGPOST=0.9731;RSQ=0.4698;ERATE=0.0065;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78369936 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0213;AVGPOST=0.9993;RSQ=0.9867;ERATE=0.0003;THETA=0.0016;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78370004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78370061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.517;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78370082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6513;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78370255 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6792;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78370288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9460;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78370367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0054;AVGPOST=0.9994;RSQ=0.9538;ERATE=0.0003;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78370391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0060;AVGPOST=0.9978;RSQ=0.8493;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78370442 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7892;AVGPOST=0.9969;RSQ=0.9922;ERATE=0.0006;THETA=0.0003;AC=1724;AN=2184 GT:DS:GL:BD 0.78937727 1
1 78370524 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5369;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78370691 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5999;AVGPOST=0.9954;RSQ=0.9928;ERATE=0.0010;THETA=0.0003;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 78370724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8141;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78370782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0382;AVGPOST=0.9965;RSQ=0.9606;ERATE=0.0006;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78370806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0309;AVGPOST=0.9984;RSQ=0.9790;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78370844 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9989;RSQ=0.9836;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78370872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0010;AVGPOST=0.9983;RSQ=0.3039;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78370901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78370958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0349;AVGPOST=0.9979;RSQ=0.9791;ERATE=0.0003;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 78370965 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7983;AVGPOST=0.9978;RSQ=0.9940;ERATE=0.0005;THETA=0.0005;AC=1744;AN=2184 GT:DS:GL:BD 0.79853481 1
1 78371014 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0267;AVGPOST=0.9997;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78371019 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7638;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78371042 rs75982337 CAA C 56739 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4945;AVGPOST=0.9947;RSQ=0.9917;ERATE=0.0007;THETA=0.0009;AC=1079;AN=2184 GT:DS:GL:BD 0.49404761 0
1 78371073 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78371095 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1662;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 78371122 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6914;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78371193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7871;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78371312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78371413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0162;AVGPOST=0.9971;RSQ=0.9235;ERATE=0.0007;THETA=0.0020;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78371414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.569;LDAF=0.0078;AVGPOST=0.9891;RSQ=0.4848;ERATE=0.0012;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78371452 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9753;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78371481 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9534;ERATE=0.0004;THETA=0.0024;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78371504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0036;AVGPOST=0.9970;RSQ=0.6708;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78371516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78371577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78371641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6881;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78371758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78371767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78371915 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9557;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78372036 . A AC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5643;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78372392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9301;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78372406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9054;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78372428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4893;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78372476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9635;ERATE=0.0003;THETA=0.0015;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78372579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.662;LDAF=0.0037;AVGPOST=0.9943;RSQ=0.3740;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78372638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6729;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78372639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0106;AVGPOST=0.9917;RSQ=0.7229;ERATE=0.0006;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78372732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9786;ERATE=0.0003;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78372813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7662;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78372923 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78373011 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78373045 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4209;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78373060 . A AAAG 1296 PASS INDEL;BAVGPOST=0.988;BRSQ=0.777;LDAF=0.0302;AVGPOST=0.9802;RSQ=0.7319;ERATE=0.0016;THETA=0.0033;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78373222 . GA G 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0053;AVGPOST=0.9958;RSQ=0.6908;ERATE=0.0007;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78373240 . A AAT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4952;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78373258 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0323;AVGPOST=0.9896;RSQ=0.8834;ERATE=0.0013;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 78373453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0311;AVGPOST=0.9990;RSQ=0.9873;ERATE=0.0003;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78373698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6462;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78373699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0157;AVGPOST=0.9985;RSQ=0.9590;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78373847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7234;ERATE=0.0005;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78373989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6566;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78374000 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9755;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78374028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5308;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78374048 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.967;LDAF=0.3438;AVGPOST=0.9781;RSQ=0.9670;ERATE=0.0007;THETA=0.0005;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 78374125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78374126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78374178 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0090;AVGPOST=0.9961;RSQ=0.8185;ERATE=0.0009;THETA=0.0022;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78374191 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8183;ERATE=0.0006;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78374198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0087;AVGPOST=0.9993;RSQ=0.9665;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78374361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6048;ERATE=0.0003;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78374411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8436;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78374412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4979;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78374497 . CTTG C 1978 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0127;AVGPOST=0.9960;RSQ=0.8781;ERATE=0.0003;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78374503 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0064;AVGPOST=0.9987;RSQ=0.9074;ERATE=0.0003;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78374624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78374740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7869;ERATE=0.0003;THETA=0.0035;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78374764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7570;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78374787 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5490;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78374789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78374899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9996;RSQ=0.9796;ERATE=0.0003;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78374922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4747;ERATE=0.0004;THETA=0.0114;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78375064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9282;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78375066 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78375140 . G GA 154 PASS INDEL;BAVGPOST=0.985;BRSQ=0.592;LDAF=0.0297;AVGPOST=0.9657;RSQ=0.5444;ERATE=0.0108;THETA=0.0070;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78375289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7878;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78375309 . C CT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4903;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78375346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78375366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0071;AVGPOST=0.9957;RSQ=0.7385;ERATE=0.0005;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78375565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7171;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78375567 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8681;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78375770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8364;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78375782 . G GT 204 PASS INDEL;BAVGPOST=0.961;BRSQ=0.525;LDAF=0.0797;AVGPOST=0.9084;RSQ=0.4923;ERATE=0.0262;THETA=0.0007;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 78375854 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0084;AVGPOST=0.9967;RSQ=0.8378;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78375867 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0409;AVGPOST=0.9995;RSQ=0.9949;ERATE=0.0003;THETA=0.0014;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 78375911 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78376007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9969;RSQ=0.9053;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78376031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9098;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78376032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0234;AVGPOST=0.9989;RSQ=0.9808;ERATE=0.0003;THETA=0.0009;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78376191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9938;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78376359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4024;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78376512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.738;LDAF=0.9911;AVGPOST=0.9957;RSQ=0.7880;ERATE=0.0009;THETA=0.0008;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 78376681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.5001;AVGPOST=0.9860;RSQ=0.9776;ERATE=0.0005;THETA=0.0005;AC=1095;AN=2184 GT:DS:GL:BD 0.50137365 1
1 78376729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78376842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8279;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78376860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78376969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78377103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9197;ERATE=0.0003;THETA=0.0027;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78377137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9995;RSQ=0.9776;ERATE=0.0002;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78377309 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78377315 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0410;AVGPOST=0.9990;RSQ=0.9906;ERATE=0.0002;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 78377342 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7526;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78377382 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78377457 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9012;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78377508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0296;AVGPOST=0.9992;RSQ=0.9873;ERATE=0.0004;THETA=0.0009;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 78377562 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7888;ERATE=0.0002;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78377599 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0314;AVGPOST=0.9989;RSQ=0.9855;ERATE=0.0005;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 78377720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78377808 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78377982 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4169;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78378116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7165;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78378125 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.8993;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78378164 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0416;AVGPOST=0.9994;RSQ=0.9935;ERATE=0.0003;THETA=0.0009;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 78378223 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78378393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0002;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78378433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9362;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78378494 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8014;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0013;AC=1750;AN=2184 GT:DS:GL:BD 0.80128205 1
1 78378514 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78378551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78378586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4422;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78378634 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.552;LDAF=0.0070;AVGPOST=0.9911;RSQ=0.5294;ERATE=0.0018;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78378789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9816;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78378800 . C CA 75 PASS INDEL;BAVGPOST=0.995;BRSQ=0.518;LDAF=0.0049;AVGPOST=0.9947;RSQ=0.5735;ERATE=0.0008;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78378988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.967;LDAF=0.7876;AVGPOST=0.9921;RSQ=0.9848;ERATE=0.0003;THETA=0.0007;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 78379014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78379239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0039;AVGPOST=0.9980;RSQ=0.7848;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78379306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6571;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78379342 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5383;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78379386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5605;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78379427 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6698;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78379512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8013;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=1750;AN=2184 GT:DS:GL:BD 0.80128205 1
1 78379583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.927;LDAF=0.1950;AVGPOST=0.9800;RSQ=0.9498;ERATE=0.0012;THETA=0.0005;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 78379608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78379614 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8390;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78379647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9027;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78379674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78379736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6518;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78379762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.650;LDAF=0.0214;AVGPOST=0.9739;RSQ=0.5334;ERATE=0.0056;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78379820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9623;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78379935 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9989;RSQ=0.9402;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78379977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8649;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78380029 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0253;AVGPOST=0.9990;RSQ=0.9837;ERATE=0.0002;THETA=0.0037;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78380087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.529;LDAF=0.0088;AVGPOST=0.9903;RSQ=0.5700;ERATE=0.0015;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78380149 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78380206 . AGG A 153 PASS INDEL;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0147;AVGPOST=0.9942;RSQ=0.8590;ERATE=0.0003;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78380301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0165;AVGPOST=0.9975;RSQ=0.9436;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78380304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0165;AVGPOST=0.9977;RSQ=0.9456;ERATE=0.0003;THETA=0.0048;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78380305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9660;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78380338 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0056;AVGPOST=0.9976;RSQ=0.8368;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78380371 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78380498 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78380527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0069;AVGPOST=0.9992;RSQ=0.9516;ERATE=0.0003;THETA=0.0055;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78380702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78380739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.8947;AVGPOST=0.9982;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=1955;AN=2184 GT:DS:GL:BD 0.89514655 1
1 78380821 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2086;AVGPOST=0.9955;RSQ=0.9897;ERATE=0.0005;THETA=0.0004;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 78380882 . T TC 952 PASS INDEL;BAVGPOST=0.913;BRSQ=0.602;LDAF=0.1022;AVGPOST=0.9226;RSQ=0.6953;ERATE=0.0080;THETA=0.0005;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 78380882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8671;ERATE=0.0006;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78381146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6990;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78381183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5506;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78381295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78381363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78381404 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5201;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78381408 . G GA 67 PASS INDEL;BAVGPOST=0.993;BRSQ=0.569;LDAF=0.0148;AVGPOST=0.9790;RSQ=0.4775;ERATE=0.0038;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78381496 . T TG 98 PASS INDEL;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8294;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78381565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0113;AVGPOST=0.9980;RSQ=0.9333;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78381766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8242;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78381769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8948;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=1955;AN=2184 GT:DS:GL:BD 0.89514655 1
1 78381803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9555;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78381924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8392;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78381960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78382110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78382118 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3668;AVGPOST=0.9889;RSQ=0.9868;ERATE=0.0003;THETA=0.0004;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 78382155 . GTAT G 2413 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0193;AVGPOST=0.9973;RSQ=0.9420;ERATE=0.0005;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78382159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.6046;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78382329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0153;AVGPOST=0.9985;RSQ=0.9565;ERATE=0.0003;THETA=0.0039;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78382348 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0184;AVGPOST=0.9990;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78382392 . G GA 31 PASS INDEL;BAVGPOST=0.989;BRSQ=0.473;LDAF=0.0231;AVGPOST=0.9698;RSQ=0.4712;ERATE=0.0067;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78382535 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78382567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.871;LDAF=0.0085;AVGPOST=0.9961;RSQ=0.8077;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78382624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78382633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9145;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78382693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9183;ERATE=0.0003;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78382784 . G GA 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.6898;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78382789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8938;AVGPOST=0.9977;RSQ=0.9912;ERATE=0.0004;THETA=0.0003;AC=1955;AN=2184 GT:DS:GL:BD 0.89514655 1
1 78382992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78383062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78383120 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0072;AVGPOST=0.9995;RSQ=0.9724;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78383128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78383253 . G GT 840 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0097;AVGPOST=0.9977;RSQ=0.9160;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78383455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8681;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78383563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0031;AVGPOST=0.9977;RSQ=0.7358;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78383624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5374;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78383943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78383959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9452;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78383998 . AT A 40 PASS INDEL;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6169;ERATE=0.0011;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78384055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0215;AVGPOST=0.9983;RSQ=0.9660;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78384239 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.8147;ERATE=0.0006;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78384307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0030;AVGPOST=0.9949;RSQ=0.3553;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78384395 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6733;ERATE=0.0008;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78384424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78384498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.541;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7514;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78384625 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0093;AVGPOST=0.9977;RSQ=0.9018;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78384681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.6333;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78384744 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.808;LDAF=0.0141;AVGPOST=0.9931;RSQ=0.8010;ERATE=0.0006;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78384812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0266;AVGPOST=0.9952;RSQ=0.9328;ERATE=0.0004;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78384863 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7515;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78384938 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0102;AVGPOST=0.9976;RSQ=0.9001;ERATE=0.0004;THETA=0.0017;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78384943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0006;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78385075 rs68087835 G GA 76056 PASS INDEL;BAVGPOST=0.981;BRSQ=0.951;LDAF=0.8080;AVGPOST=0.9599;RSQ=0.9039;ERATE=0.0087;THETA=0.0052;AC=1780;AN=2184 GT:DS:GL:BD 0.81501830 1
1 78385106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.5919;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78385241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8690;ERATE=0.0003;THETA=0.0068;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78385330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5801;ERATE=0.0005;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78385392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0096;AVGPOST=0.9996;RSQ=0.9824;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78385663 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6619;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78385715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.9130;AVGPOST=0.9969;RSQ=0.9853;ERATE=0.0007;THETA=0.0003;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 78385837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9152;AVGPOST=0.9988;RSQ=0.9941;ERATE=0.0003;THETA=0.0008;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 78385894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78385900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9991;RSQ=0.9834;ERATE=0.0002;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78385925 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9812;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78386114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9147;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 78386277 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9908;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0002;THETA=0.0008;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 78386307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.7978;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78386421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8812;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78386472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78386476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6377;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78386531 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9117;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78386537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9771;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78386736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8717;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78386749 . T TC 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0044;AVGPOST=0.9950;RSQ=0.5804;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78386800 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5801;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0003;THETA=0.0008;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 78386827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.847;LDAF=0.0327;AVGPOST=0.9937;RSQ=0.9175;ERATE=0.0004;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 78386975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9135;AVGPOST=0.9983;RSQ=0.9914;ERATE=0.0004;THETA=0.0006;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 78387112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9149;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0003;THETA=0.0010;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 78387115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0144;AVGPOST=0.9989;RSQ=0.9634;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78387140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0002;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78387203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0003;THETA=0.0041;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78387211 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0095;AVGPOST=0.9996;RSQ=0.9806;ERATE=0.0002;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78387255 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6094;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=1330;AN=2184 GT:DS:GL:BD 0.60897434 1
1 78387460 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78387463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7250;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78387544 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78387613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9149;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 78387703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0216;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78387821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9895;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78387871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0089;AVGPOST=0.9989;RSQ=0.9542;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78387876 . GC G 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5793;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78388025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5801;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 78388195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0705;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 78388200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9464;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78388328 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4908;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78388353 rs58827253 GA G 14533 PASS INDEL;BAVGPOST=0.987;BRSQ=0.966;LDAF=0.2183;AVGPOST=0.9767;RSQ=0.9507;ERATE=0.0047;THETA=0.0006;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 78388405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0003;THETA=0.0049;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78388529 . G GA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78388543 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9082;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78388548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9907;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 78388589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78388628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9135;AVGPOST=0.9983;RSQ=0.9917;ERATE=0.0003;THETA=0.0007;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 78388644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9141;AVGPOST=0.9983;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 78388735 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78388823 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9145;AVGPOST=0.9986;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 78388854 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7535;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78388893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78388909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.9092;AVGPOST=0.9925;RSQ=0.9664;ERATE=0.0012;THETA=0.0019;AC=1990;AN=2184 GT:DS:GL:BD 0.91117215 1
1 78388924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9147;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 78389012 . ACTAGG A 8448 PASS INDEL;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0706;AVGPOST=0.9956;RSQ=0.9793;ERATE=0.0005;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 78389067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9852;AVGPOST=0.9997;RSQ=0.9901;ERATE=0.0003;THETA=0.0002;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 78389087 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9139;AVGPOST=0.9983;RSQ=0.9913;ERATE=0.0005;THETA=0.0003;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 78389155 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6824;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78389209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78389210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5455;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78389250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9138;AVGPOST=0.9982;RSQ=0.9911;ERATE=0.0005;THETA=0.0008;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 78389265 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78389311 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9641;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78389484 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9137;AVGPOST=0.9980;RSQ=0.9903;ERATE=0.0005;THETA=0.0003;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 78389492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2636;AVGPOST=0.9961;RSQ=0.9929;ERATE=0.0006;THETA=0.0007;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 78389522 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9888;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78389574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5909;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78389636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9647;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78389705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6378;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78389852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5787;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78390042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78390124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9991;RSQ=0.9501;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78390249 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6464;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78390309 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8556;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78390363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0247;AVGPOST=0.9958;RSQ=0.9306;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78390397 rs76677234 T TA 97083 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9135;AVGPOST=0.9968;RSQ=0.9846;ERATE=0.0006;THETA=0.0007;AC=1995;AN=2184 GT:DS:GL:BD 0.91346157 1
1 78390409 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6759;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78390420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78390441 rs71091407 CAGAG C 117300 PASS INDEL;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.9113;AVGPOST=0.9949;RSQ=0.9785;ERATE=0.0011;THETA=0.0005;AC=1995;AN=2184 GT:DS:GL:BD 0.91346157 1
1 78390543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2652;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0002;THETA=0.0007;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 78390575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6204;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78390588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6443;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78390844 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78390971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78390974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8660;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78391018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0124;AVGPOST=0.9980;RSQ=0.9306;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78391101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78391106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0198;AVGPOST=0.9991;RSQ=0.9859;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78391172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78391176 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78391190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.944;LDAF=0.0306;AVGPOST=0.9957;RSQ=0.9418;ERATE=0.0007;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 78391214 . AC A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6793;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78391217 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5229;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78391248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1797;AVGPOST=0.9926;RSQ=0.9811;ERATE=0.0005;THETA=0.0004;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 78391268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78391371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6527;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78391541 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4851;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78391688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4448;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78391692 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7902;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78391704 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8712;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78391793 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0493;AVGPOST=0.9992;RSQ=0.9929;ERATE=0.0003;THETA=0.0006;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 78391830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78391832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78391889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78391898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78391907 . AC A 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5263;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78391917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5735;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78392166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78392230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8808;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78392278 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78392283 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6343;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78392453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78392529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78392536 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4657;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78392687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6672;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78392689 . AT A 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4298;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78392698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5495;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78392778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6194;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78392938 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4745;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78392989 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0057;AVGPOST=0.9993;RSQ=0.9579;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78393010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0250;AVGPOST=0.9990;RSQ=0.9836;ERATE=0.0004;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78393011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8679;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78393134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.627;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7247;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78393287 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5713;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78393320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6677;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78393346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.603;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5379;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78393359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8179;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78393478 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9490;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78393504 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5724;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78393521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8677;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78393604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6621;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78393613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78393629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9590;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78393723 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0043;AVGPOST=0.9991;RSQ=0.9193;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78393809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0062;AVGPOST=0.9961;RSQ=0.7583;ERATE=0.0006;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78393818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6304;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78393874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78394100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78394102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0100;AVGPOST=0.9986;RSQ=0.9428;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78394360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1785;AVGPOST=0.9973;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 78394484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0153;AVGPOST=0.9989;RSQ=0.9746;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78394593 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78394628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78394719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78394749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78394776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8899;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78394934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78394975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78395194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78395210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0247;AVGPOST=0.9986;RSQ=0.9821;ERATE=0.0003;THETA=0.0015;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78395417 . ATCC A 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78395443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0186;AVGPOST=0.9994;RSQ=0.9851;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78395515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78395635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5661;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78395695 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8207;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78395697 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0106;AVGPOST=0.9987;RSQ=0.9580;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78395739 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5814;AVGPOST=0.9979;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 78395967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2449;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0004;THETA=0.0007;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 78395979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5904;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78396021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3466;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0007;THETA=0.0005;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 78396062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9133;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78396065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1394;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0005;THETA=0.0004;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 78396171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0953;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 78396180 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0951;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 78396186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0292;AVGPOST=0.9991;RSQ=0.9867;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78396221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.7897;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78396253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9077;AVGPOST=0.9984;RSQ=0.9919;ERATE=0.0007;THETA=0.0019;AC=1984;AN=2184 GT:DS:GL:BD 0.90842491 1
1 78396352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0949;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 78396357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78396374 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5332;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78396388 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1218;AVGPOST=0.9969;RSQ=0.9883;ERATE=0.0006;THETA=0.0004;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 78396608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0151;AVGPOST=0.9990;RSQ=0.9713;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78396634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7119;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78396704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.772;LDAF=0.0077;AVGPOST=0.9983;RSQ=0.8977;ERATE=0.0006;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78396871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78396946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5723;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78397022 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5816;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78397041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0102;AVGPOST=0.9980;RSQ=0.9243;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78397112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0290;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0004;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78397169 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8912;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78397389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8199;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78397449 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1370;AVGPOST=0.9951;RSQ=0.9842;ERATE=0.0006;THETA=0.0005;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 78397452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8328;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78397523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.817;LDAF=0.0092;AVGPOST=0.9956;RSQ=0.8194;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78397532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4621;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78397544 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.960;LDAF=0.0729;AVGPOST=0.9973;RSQ=0.9839;ERATE=0.0004;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 78397704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5078;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78397786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7867;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78397831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5013;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78397954 . TG T 130 PASS INDEL;BAVGPOST=0.991;BRSQ=0.553;LDAF=0.0183;AVGPOST=0.9766;RSQ=0.4855;ERATE=0.0033;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78398014 . TAGAA T 190 PASS INDEL;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6773;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78398055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7164;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78398068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0958;AVGPOST=0.9969;RSQ=0.9860;ERATE=0.0006;THETA=0.0005;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 78398086 . C CT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3873;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78398120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5119;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78398339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5380;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78398345 . AATTTAAAAT A 830 PASS INDEL;BAVGPOST=0.998;BRSQ=0.686;LDAF=0.0051;AVGPOST=0.9963;RSQ=0.7169;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78398427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0819;AVGPOST=0.9977;RSQ=0.9885;ERATE=0.0005;THETA=0.0002;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 78398489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.5361;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78398500 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.809;LDAF=0.0060;AVGPOST=0.9967;RSQ=0.7829;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78398720 . T TATCA 13248 PASS INDEL;BAVGPOST=0.989;BRSQ=0.918;LDAF=0.0683;AVGPOST=0.9962;RSQ=0.9765;ERATE=0.0006;THETA=0.0006;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 78398744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.935;LDAF=0.0762;AVGPOST=0.9847;RSQ=0.9208;ERATE=0.0006;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 78398750 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6610;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78398752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0148;AVGPOST=0.9993;RSQ=0.9819;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78398782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.5798;AVGPOST=0.9974;RSQ=0.9961;ERATE=0.0008;THETA=0.0003;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 78398978 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6048;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78399110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4409;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0005;THETA=0.0003;AC=962;AN=2184 GT:DS:GL:BD 0.44047618 0
1 78399119 . C CA 286 PASS INDEL;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7455;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78399122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0809;AVGPOST=0.9988;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 78399173 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78399176 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6194;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78399190 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9994;RSQ=0.9812;ERATE=0.0004;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78399269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7480;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78399415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78399416 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78399431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0288;AVGPOST=0.9989;RSQ=0.9823;ERATE=0.0004;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78399610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5803;AVGPOST=0.9976;RSQ=0.9968;ERATE=0.0006;THETA=0.0005;AC=1265;AN=2184 GT:DS:GL:BD 0.57921243 1
1 78399624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5341;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78399685 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4014;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78399965 . ATGT A 210 PASS INDEL;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0036;AVGPOST=0.9965;RSQ=0.5764;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78400014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9273;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78400071 . T TAGCAA 6902 PASS INDEL;BAVGPOST=0.984;BRSQ=0.908;LDAF=0.0886;AVGPOST=0.9900;RSQ=0.9563;ERATE=0.0007;THETA=0.0004;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 78400197 . A AGCAAAGAATT 23048 PASS INDEL;BAVGPOST=0.984;BRSQ=0.909;LDAF=0.0878;AVGPOST=0.9924;RSQ=0.9682;ERATE=0.0004;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 78400198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7673;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78400332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0814;AVGPOST=0.9984;RSQ=0.9922;ERATE=0.0003;THETA=0.0012;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 78400385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5599;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78400405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0290;AVGPOST=0.9994;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78400588 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.472;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4628;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78400657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0808;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 78400679 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0289;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0003;THETA=0.0011;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78400705 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5636;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78400708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0109;AVGPOST=0.9968;RSQ=0.8796;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78400833 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1391;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 78400871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0807;AVGPOST=0.9989;RSQ=0.9941;ERATE=0.0004;THETA=0.0004;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 78400883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78400896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4951;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78400932 rs71076577 CGAT C 48486 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3145;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 78400962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.720;LDAF=0.0074;AVGPOST=0.9943;RSQ=0.6932;ERATE=0.0005;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78401082 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78401102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78401184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78401250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78401278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1771;AVGPOST=0.9957;RSQ=0.9893;ERATE=0.0004;THETA=0.0007;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 78401325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8911;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78401340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78401381 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78401387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0083;AVGPOST=0.9983;RSQ=0.9118;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78401437 . AT A 760 PASS INDEL;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9207;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78401467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8880;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78401470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6790;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78401553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9559;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78401754 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78401840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9170;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78401852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3608;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78402012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8168;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78402108 . T TC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5313;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78402127 . AT A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4924;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78402184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78402187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78402209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8928;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78402329 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.9009;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78402478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0211;AVGPOST=0.9949;RSQ=0.9082;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78402507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.2606;AVGPOST=0.9921;RSQ=0.9843;ERATE=0.0005;THETA=0.0009;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 78402527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5452;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78402540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4804;AVGPOST=0.9894;RSQ=0.9842;ERATE=0.0007;THETA=0.0007;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 78402587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78402617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0171;AVGPOST=0.9977;RSQ=0.9437;ERATE=0.0004;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78402645 . G GGTT 69 PASS INDEL;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8652;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78402794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78402809 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0023;AVGPOST=0.9966;RSQ=0.5064;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78402874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8829;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78402912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0040;AVGPOST=0.9986;RSQ=0.8494;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78402924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78402962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9183;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78402987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1415;AVGPOST=0.9955;RSQ=0.9844;ERATE=0.0005;THETA=0.0005;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 78403013 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5032;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78403082 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0003;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78403127 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5962;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78403173 . CT C 150 PASS INDEL;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0089;AVGPOST=0.9953;RSQ=0.8012;ERATE=0.0006;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78403174 . CT C 334 PASS INDEL;BAVGPOST=0.990;BRSQ=0.679;LDAF=0.0301;AVGPOST=0.9699;RSQ=0.6012;ERATE=0.0040;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78403186 . CT C 1304 PASS INDEL;BAVGPOST=0.966;BRSQ=0.672;LDAF=0.0904;AVGPOST=0.9138;RSQ=0.5674;ERATE=0.0269;THETA=0.0005;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 78403190 . TC T 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8908;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78403197 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9362;ERATE=0.0003;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78403204 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78403211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78403289 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78403383 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8318;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78403415 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78403451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0030;AVGPOST=0.9974;RSQ=0.7109;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78403458 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78403507 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7169;ERATE=0.0006;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78403510 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0102;AVGPOST=0.9987;RSQ=0.9476;ERATE=0.0004;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78403656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6181;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78403711 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78403715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8302;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78403729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8693;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78403744 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9867;ERATE=0.0003;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78403748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7848;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78403758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7458;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78403842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78403919 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4585;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78403935 . A AT 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5529;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78403964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1235;AVGPOST=0.9967;RSQ=0.9868;ERATE=0.0004;THETA=0.0014;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 78404000 . TG T 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5055;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78404012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0033;AVGPOST=0.9971;RSQ=0.6697;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78404018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0041;AVGPOST=0.9974;RSQ=0.7757;ERATE=0.0005;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78404058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7346;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78404059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6313;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78404080 . A AT 113 PASS INDEL;BAVGPOST=0.997;BRSQ=0.656;LDAF=0.0080;AVGPOST=0.9889;RSQ=0.4810;ERATE=0.0008;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78404143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0072;AVGPOST=0.9973;RSQ=0.8468;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78404159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7756;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78404165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4210;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78404205 . TCTC T 556 PASS INDEL;BAVGPOST=0.998;BRSQ=0.797;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8713;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78404248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78404291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7096;ERATE=0.0005;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78404376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9323;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78404490 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4450;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78404501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78404506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5352;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78404527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4584;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78404616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78404652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9253;ERATE=0.0004;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78404658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8983;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78404704 . A AT 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5706;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78404706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.673;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5379;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78404720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7938;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78404838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9174;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78404919 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8950;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78405223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.825;LDAF=0.0234;AVGPOST=0.9950;RSQ=0.9123;ERATE=0.0005;THETA=0.0012;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78405278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78405410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6493;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78405462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78405465 . CCAA C 2371 PASS INDEL;BAVGPOST=0.995;BRSQ=0.922;LDAF=0.0129;AVGPOST=0.9983;RSQ=0.9525;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78405473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9987;RSQ=0.9377;ERATE=0.0003;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78405613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78405614 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9565;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78405637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6881;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78405683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78405705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6896;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78405820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0158;AVGPOST=0.9987;RSQ=0.9669;ERATE=0.0004;THETA=0.0015;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78405889 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78405896 . GC G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.6449;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78405918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78405931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9992;RSQ=0.9626;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78405939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1828;AVGPOST=0.9958;RSQ=0.9891;ERATE=0.0004;THETA=0.0038;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 78405964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78405966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9360;ERATE=0.0003;THETA=0.0032;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78406028 . CTG C 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8395;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78406031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78406114 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78406116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0660;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 78406173 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9434;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78406176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78406329 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5258;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78406395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0434;AVGPOST=0.9981;RSQ=0.9856;ERATE=0.0003;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 78406503 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.940;LDAF=0.0327;AVGPOST=0.9980;RSQ=0.9750;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 78406748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.941;LDAF=0.2118;AVGPOST=0.9968;RSQ=0.9918;ERATE=0.0006;THETA=0.0006;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 78406752 . A AC 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78406812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8519;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78406940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8904;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78407062 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7276;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78407117 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.775;LDAF=0.0060;AVGPOST=0.9979;RSQ=0.8788;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78407154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6710;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78407240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5412;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78407318 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0184;AVGPOST=0.9986;RSQ=0.9689;ERATE=0.0005;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78407364 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.877;LDAF=0.0230;AVGPOST=0.9947;RSQ=0.9118;ERATE=0.0004;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78407387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4406;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78407459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9239;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78407488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6489;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0007;THETA=0.0010;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 78407824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8294;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78407915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9368;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78408047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78408048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.956;LDAF=0.1995;AVGPOST=0.9911;RSQ=0.9790;ERATE=0.0007;THETA=0.0003;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 78408111 . A AAAACC 214 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4578;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78408158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0050;AVGPOST=0.9953;RSQ=0.6041;ERATE=0.0012;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78408422 . AC A 497 PASS INDEL;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7140;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78408439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0649;AVGPOST=0.9990;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 78408491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9648;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78408528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8340;ERATE=0.0004;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78408809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9785;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 78408811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78408819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78408909 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0239;AVGPOST=0.9985;RSQ=0.9761;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78408969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9354;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78409007 . CT C 848 PASS INDEL;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.7990;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78409021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8967;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78409138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0536;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 78409148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0154;AVGPOST=0.9973;RSQ=0.9315;ERATE=0.0005;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78409149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2130;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 78409377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6585;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78409529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7248;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78409555 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0176;AVGPOST=0.9992;RSQ=0.9774;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78409646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8681;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78409663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1585;AVGPOST=0.9987;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 78409757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.7497;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78409790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6269;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78409923 . ACT A 1283 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9790;ERATE=0.0004;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78409961 . C CA 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78410059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2168;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 78410090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7461;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78410119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78410126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7374;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78410150 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.855;LDAF=0.9622;AVGPOST=0.9812;RSQ=0.8070;ERATE=0.0045;THETA=0.0004;AC=2111;AN=2184 GT:DS:GL:BD 0.96657509 1
1 78410161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78410190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78410233 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78410387 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8787;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78410449 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78410460 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=0.9996;RSQ=0.9839;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78410651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78410700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78410861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78410988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78411086 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78411265 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0404;AVGPOST=0.9985;RSQ=0.9851;ERATE=0.0005;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 78411332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7289;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78411365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0197;AVGPOST=0.9989;RSQ=0.9735;ERATE=0.0005;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78411448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0197;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78411600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9152;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78411618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1288;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 78411754 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.5111;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78412042 . GAC G 627 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9970;RSQ=0.8955;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78412073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8077;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78412088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78412104 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9908;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78412252 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7199;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78412274 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78412341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78412382 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0018;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78412394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78412623 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8609;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78412744 . C CCGACA 203 PASS INDEL;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6092;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78412769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7133;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78412770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78412874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1277;AVGPOST=0.9982;RSQ=0.9930;ERATE=0.0004;THETA=0.0005;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 78412898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8985;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78413106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78413114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6492;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78413245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8619;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78413296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78413319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.0519;AVGPOST=0.9981;RSQ=0.9849;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 78413383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7665;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78413396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78413446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78413520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78413595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78413635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6060;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78413755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8594;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78413769 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7624;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78413797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9423;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78414026 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0820;AVGPOST=0.9990;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 78414027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0840;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 78414186 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8811;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78414200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78414255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78414319 . GA G 383 PASS INDEL;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0054;AVGPOST=0.9971;RSQ=0.8115;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78414341 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78414367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78414443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1046;AVGPOST=0.9984;RSQ=0.9940;ERATE=0.0004;THETA=0.0009;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 78414447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9880;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78414495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.874;LDAF=0.0105;AVGPOST=0.9988;RSQ=0.9509;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78414536 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78414649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8573;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78414672 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78414690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78414692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78414763 . CTTTA C 176 PASS INDEL;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5055;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78415023 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0122;AVGPOST=0.9981;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78415037 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78415058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6678;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78415202 . C CT 1067 PASS INDEL;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0146;AVGPOST=0.9984;RSQ=0.9479;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78415232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0142;AVGPOST=0.9994;RSQ=0.9782;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78415240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9261;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78415241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0801;AVGPOST=0.9992;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 78415287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9196;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78415368 . T TCACATCCAC 5481 PASS INDEL;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0141;AVGPOST=0.9995;RSQ=0.9832;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78415436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0087;AVGPOST=0.9992;RSQ=0.9625;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78415615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78415726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78415779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7933;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78415855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6545;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78415937 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78416000 . AG A 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.466;LDAF=0.0042;AVGPOST=0.9940;RSQ=0.3971;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78416130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78416132 . CA C 460 PASS INDEL;BAVGPOST=0.996;BRSQ=0.738;LDAF=0.0088;AVGPOST=0.9922;RSQ=0.6305;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78416195 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6578;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78416224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0340;AVGPOST=0.9994;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 78416408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0526;AVGPOST=0.9973;RSQ=0.9801;ERATE=0.0004;THETA=0.0005;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 78416554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2264;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 78416555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9680;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78416607 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8234;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78416647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9931;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78416837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78416858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78416961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1723;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 78417151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78417158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78417441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9887;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78417455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78417464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78417509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0253;AVGPOST=0.9967;RSQ=0.9429;ERATE=0.0005;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78417551 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.854;BRSQ=0.470;LDAF=0.7910;AVGPOST=0.7733;RSQ=0.4453;ERATE=0.0659;THETA=0.0003;AC=1884;AN=2184 GT:DS:GL:BD 0.86263734 1
1 78417593 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1715;AVGPOST=0.9956;RSQ=0.9868;ERATE=0.0006;THETA=0.0004;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 78417680 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.619;LDAF=0.0093;AVGPOST=0.9923;RSQ=0.6824;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78417742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0030;AVGPOST=0.9961;RSQ=0.4835;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78417746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0077;AVGPOST=0.9978;RSQ=0.8906;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78417752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78417869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0028;AVGPOST=0.9957;RSQ=0.4346;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78417875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0030;AVGPOST=0.9961;RSQ=0.4391;ERATE=0.0016;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78418106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9233;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78418161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8408;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78418283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78418318 . C CA 11 PASS INDEL;BAVGPOST=0.990;BRSQ=0.513;LDAF=0.0198;AVGPOST=0.9767;RSQ=0.5495;ERATE=0.0061;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78418409 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.894;LDAF=0.0757;AVGPOST=0.9949;RSQ=0.9689;ERATE=0.0004;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 78418543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4271;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78418577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78418610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0801;AVGPOST=0.9987;RSQ=0.9920;ERATE=0.0004;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 78418672 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0864;AVGPOST=0.9853;RSQ=0.9279;ERATE=0.0009;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 78418707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7551;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78418813 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78419032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78419037 . GCA G 195 PASS INDEL;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6170;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78419303 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9970;RSQ=0.5394;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78419494 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9982;RSQ=0.9134;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78419578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4634;AVGPOST=0.9742;RSQ=0.9622;ERATE=0.0018;THETA=0.0004;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 78419715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.458;LDAF=0.0238;AVGPOST=0.9718;RSQ=0.5475;ERATE=0.0026;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78419743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.4939;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78419821 rs35262166 AT A 5268 PASS INDEL;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0459;AVGPOST=0.9971;RSQ=0.9714;ERATE=0.0004;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 78420150 rs66468940 AG A 5041 PASS INDEL;BAVGPOST=0.994;BRSQ=0.958;LDAF=0.0437;AVGPOST=0.9992;RSQ=0.9908;ERATE=0.0004;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 78420154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0800;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0004;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 78420172 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4553;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0005;THETA=0.0008;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 78420368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78420413 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9378;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78420426 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8907;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78420534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8426;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78420599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0789;AVGPOST=0.9986;RSQ=0.9919;ERATE=0.0004;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 78420659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.933;LDAF=0.0798;AVGPOST=0.9952;RSQ=0.9715;ERATE=0.0008;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 78420837 . A AG 32 PASS INDEL;BAVGPOST=0.976;BRSQ=0.370;LDAF=0.0484;AVGPOST=0.9319;RSQ=0.4416;ERATE=0.0090;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78420878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0056;AVGPOST=0.9938;RSQ=0.5901;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78421108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0029;AVGPOST=0.9950;RSQ=0.2838;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78421131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5079;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78421149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6583;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78421221 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78421247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6223;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78421384 rs35102692 G GT 42734 PASS INDEL;BAVGPOST=0.974;BRSQ=0.944;LDAF=0.6686;AVGPOST=0.9586;RSQ=0.9247;ERATE=0.0120;THETA=0.0003;AC=1468;AN=2184 GT:DS:GL:BD 0.67216116 1
1 78421431 . GA G 632 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8241;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78421507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78421670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0059;AVGPOST=0.9986;RSQ=0.8920;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78421809 . GAGAC G 29 PASS INDEL;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0065;AVGPOST=0.9910;RSQ=0.4542;ERATE=0.0028;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78421860 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9564;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78421879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0223;AVGPOST=0.9992;RSQ=0.9873;ERATE=0.0003;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78421888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78421892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9772;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78421958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78421987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78422003 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78422011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0004;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78422079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7478;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78422144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3266;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 78422244 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5561;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78422250 . GGT G 415 PASS INDEL;BAVGPOST=0.979;BRSQ=0.677;LDAF=0.0547;AVGPOST=0.9438;RSQ=0.5413;ERATE=0.0231;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78422425 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0287;AVGPOST=0.9992;RSQ=0.9889;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 78422435 . G GGAT 57923 PASS INDEL;BAVGPOST=0.961;BRSQ=0.918;LDAF=0.6537;AVGPOST=0.9389;RSQ=0.8968;ERATE=0.0194;THETA=0.0002;AC=1453;AN=2184 GT:DS:GL:BD 0.66529304 1
1 78422555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5363;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78422678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7750;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78422711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0151;AVGPOST=0.9980;RSQ=0.9590;ERATE=0.0005;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78422767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0037;AVGPOST=0.9943;RSQ=0.4317;ERATE=0.0013;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78422768 . TAG T 96 PASS INDEL;BAVGPOST=0.990;BRSQ=0.621;LDAF=0.0244;AVGPOST=0.9723;RSQ=0.5322;ERATE=0.0079;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78422811 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6520;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78422831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78422874 rs66720253 ATCTAT A 2280 PASS INDEL;BAVGPOST=0.634;BRSQ=0.303;LDAF=0.5993;AVGPOST=0.6436;RSQ=0.3483;ERATE=0.0443;THETA=0.0004;AC=1441;AN=2184 GT:DS:GL:BD 0.65979856 1
1 78423030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.576;LDAF=0.0370;AVGPOST=0.9544;RSQ=0.5039;ERATE=0.0109;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78423078 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8411;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78423336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3250;AVGPOST=0.9923;RSQ=0.9863;ERATE=0.0017;THETA=0.0015;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 78423464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0122;AVGPOST=0.9978;RSQ=0.9290;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78423642 . GC G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5370;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78423854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78424066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9009;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78424072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78424459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6844;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=1495;AN=2184 GT:DS:GL:BD 0.68452382 1
1 78424471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5189;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78424630 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78425160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8974;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78425225 . ATTG A 348 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9976;RSQ=0.8125;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78425245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7585;ERATE=0.0007;THETA=0.0038;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78425253 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7917;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78425303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7673;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78425304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7007;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0003;THETA=0.0021;AC=1531;AN=2184 GT:DS:GL:BD 0.70100731 1
1 78425477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5943;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78425497 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8845;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78425503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78425535 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0085;AVGPOST=0.9984;RSQ=0.9134;ERATE=0.0004;THETA=0.0020;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78425628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78425693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9709;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78425751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5093;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78425823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78425897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0234;AVGPOST=0.9989;RSQ=0.9802;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78425952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78426051 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0099;AVGPOST=0.9987;RSQ=0.9478;ERATE=0.0004;THETA=0.0025;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78426072 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0259;AVGPOST=0.9979;RSQ=0.9668;ERATE=0.0005;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78426202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0033;AVGPOST=0.9955;RSQ=0.5210;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78426229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.431;LDAF=0.0050;AVGPOST=0.9956;RSQ=0.6424;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78426384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.498;LDAF=0.0046;AVGPOST=0.9932;RSQ=0.4459;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78426398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0089;AVGPOST=0.9919;RSQ=0.6211;ERATE=0.0008;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78426437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0268;AVGPOST=0.9976;RSQ=0.9603;ERATE=0.0005;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78426444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0078;AVGPOST=0.9974;RSQ=0.8712;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78426596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8241;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78426662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9795;ERATE=0.0003;THETA=0.0027;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78426718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9993;RSQ=0.9696;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78426727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5713;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78426770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78426786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.6685;ERATE=0.0011;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78426982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.879;LDAF=0.0345;AVGPOST=0.9927;RSQ=0.9107;ERATE=0.0005;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 78427200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9847;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78427321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7834;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78427327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78427380 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78427389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7257;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78427510 . TTG T 209 PASS INDEL;BAVGPOST=0.993;BRSQ=0.594;LDAF=0.0162;AVGPOST=0.9808;RSQ=0.5353;ERATE=0.0048;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78427528 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9658;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78427542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9351;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78427545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1549;AVGPOST=0.9979;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 78427586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8385;ERATE=0.0013;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78427718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0247;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78427721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78427771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8283;ERATE=0.0013;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78427853 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.840;LDAF=0.0222;AVGPOST=0.9914;RSQ=0.8525;ERATE=0.0004;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78427962 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9298;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78427985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1565;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 78428029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7875;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78428080 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78428145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78428219 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5247;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78428228 . CT C 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78428276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8112;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78428293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5678;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78428300 . CCTTT C 345 PASS INDEL;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4820;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78428345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8428;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78428354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8018;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78428365 . GA G 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78428368 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6619;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78428464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0646;AVGPOST=0.9976;RSQ=0.9838;ERATE=0.0005;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 78428513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5532;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78428610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78428616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0211;AVGPOST=0.9981;RSQ=0.9665;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78428815 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78428931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9061;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78429048 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78429071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0562;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 78429075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7509;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78429128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78429297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78429311 . A AT 1115 PASS INDEL;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8777;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78429352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2269;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 78429364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7188;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78429382 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78429474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7867;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78429485 rs72516272 ACATTTTC A 2489 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78429592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78429625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78429655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78429665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0248;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78429741 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6824;AVGPOST=0.9935;RSQ=0.9882;ERATE=0.0010;THETA=0.0005;AC=1489;AN=2184 GT:DS:GL:BD 0.68177658 1
1 78429807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78429965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78430011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78430029 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78430042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0248;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78430179 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78430219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78430310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78430509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0708;AVGPOST=0.9988;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 78430694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78430785 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1557;AVGPOST=0.9966;RSQ=0.9890;ERATE=0.0005;THETA=0.0007;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 78430923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0092;AVGPOST=0.9994;RSQ=0.9707;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78430929 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.834;BRSQ=0.757;LDAF=0.4303;AVGPOST=0.8514;RSQ=0.7970;ERATE=0.0068;THETA=0.0006;AC=952;AN=2184 GT:DS:GL:BD 0.43589744 0
1 78431323 . TGG T 3035 PASS INDEL;BAVGPOST=0.944;BRSQ=0.886;LDAF=0.2145;AVGPOST=0.9447;RSQ=0.9016;ERATE=0.0025;THETA=0.0007;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 78431340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.908;LDAF=0.2118;AVGPOST=0.9566;RSQ=0.9226;ERATE=0.0009;THETA=0.0027;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 78431341 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.908;LDAF=0.2189;AVGPOST=0.9640;RSQ=0.9388;ERATE=0.0003;THETA=0.0005;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 78431342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.975;LDAF=0.2135;AVGPOST=0.9941;RSQ=0.9870;ERATE=0.0004;THETA=0.0008;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 78431425 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.2914;AVGPOST=0.9943;RSQ=0.9916;ERATE=0.0003;THETA=0.0047;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 78431429 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.923;LDAF=0.3108;AVGPOST=0.9759;RSQ=0.9613;ERATE=0.0009;THETA=0.0003;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 78431469 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.968;LDAF=0.2926;AVGPOST=0.9929;RSQ=0.9891;ERATE=0.0007;THETA=0.0025;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 78431475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0060;AVGPOST=0.9961;RSQ=0.7523;ERATE=0.0005;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78431724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0260;AVGPOST=0.9829;RSQ=0.7711;ERATE=0.0008;THETA=0.0031;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78431914 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6779;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78431951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8195;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78431965 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.711;LDAF=0.0552;AVGPOST=0.9813;RSQ=0.8809;ERATE=0.0009;THETA=0.0006;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 78432284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7204;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78432457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.593;LDAF=0.0056;AVGPOST=0.9947;RSQ=0.6134;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78432489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.577;LDAF=0.0054;AVGPOST=0.9928;RSQ=0.4930;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78432504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.438;LDAF=0.0066;AVGPOST=0.9941;RSQ=0.6468;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78432525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0673;AVGPOST=0.9977;RSQ=0.9895;ERATE=0.0003;THETA=0.0025;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 78432574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3378;AVGPOST=0.9947;RSQ=0.9899;ERATE=0.0007;THETA=0.0007;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 78432592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.928;LDAF=0.2739;AVGPOST=0.9736;RSQ=0.9596;ERATE=0.0009;THETA=0.0006;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 78432820 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2232;AVGPOST=0.9957;RSQ=0.9906;ERATE=0.0006;THETA=0.0028;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 78433166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.551;LDAF=0.0123;AVGPOST=0.9888;RSQ=0.6661;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78433196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0157;AVGPOST=0.9986;RSQ=0.9665;ERATE=0.0003;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78433397 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.802;LDAF=0.9043;AVGPOST=0.9661;RSQ=0.8721;ERATE=0.0009;THETA=0.0006;AC=1985;AN=2184 GT:DS:GL:BD 0.90888280 1
1 78433425 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.802;LDAF=0.9048;AVGPOST=0.9632;RSQ=0.8602;ERATE=0.0020;THETA=0.0006;AC=1994;AN=2184 GT:DS:GL:BD 0.91300368 1
1 78433427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.6066;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78433854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0361;AVGPOST=0.9995;RSQ=0.9941;ERATE=0.0003;THETA=0.0016;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78433884 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.802;LDAF=0.0311;AVGPOST=0.9849;RSQ=0.8140;ERATE=0.0008;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 78433885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.7017;AVGPOST=0.9813;RSQ=0.9713;ERATE=0.0013;THETA=0.0005;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 78433897 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3728;AVGPOST=0.9724;RSQ=0.9565;ERATE=0.0018;THETA=0.0007;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 78433920 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.795;LDAF=0.2529;AVGPOST=0.9341;RSQ=0.8785;ERATE=0.0008;THETA=0.0009;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 78434016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.849;BRSQ=0.745;LDAF=0.5755;AVGPOST=0.8451;RSQ=0.7736;ERATE=0.0139;THETA=0.0003;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 78434017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9982;RSQ=0.9559;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78434050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.563;LDAF=0.0104;AVGPOST=0.9959;RSQ=0.8179;ERATE=0.0009;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78434089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3636;AVGPOST=0.9919;RSQ=0.9863;ERATE=0.0006;THETA=0.0007;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 78434112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.778;LDAF=0.9486;AVGPOST=0.9809;RSQ=0.8601;ERATE=0.0012;THETA=0.0010;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 78434124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0087;AVGPOST=0.9986;RSQ=0.9421;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78434148 . C CA 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4555;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78434152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.763;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8028;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78434160 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0395;AVGPOST=0.9972;RSQ=0.9713;ERATE=0.0005;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 78434326 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6998;AVGPOST=0.9903;RSQ=0.9841;ERATE=0.0011;THETA=0.0006;AC=1530;AN=2184 GT:DS:GL:BD 0.70054942 1
1 78434334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.6778;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78434951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.695;LDAF=0.0080;AVGPOST=0.9943;RSQ=0.7485;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78434966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0040;AVGPOST=0.9966;RSQ=0.6659;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78434967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0307;AVGPOST=0.9980;RSQ=0.9744;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78435018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1537;AVGPOST=0.9967;RSQ=0.9894;ERATE=0.0004;THETA=0.0007;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 78435031 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9990;RSQ=0.9753;ERATE=0.0004;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78435035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.3290;AVGPOST=0.9777;RSQ=0.9623;ERATE=0.0040;THETA=0.0003;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 78435047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.6101;ERATE=0.0011;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78435053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78435279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.878;BRSQ=0.786;LDAF=0.5424;AVGPOST=0.8611;RSQ=0.7860;ERATE=0.0206;THETA=0.0003;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 78435337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.874;LDAF=0.2946;AVGPOST=0.9477;RSQ=0.9123;ERATE=0.0007;THETA=0.0003;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 78435346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0700;AVGPOST=0.9950;RSQ=0.9769;ERATE=0.0005;THETA=0.0007;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 78435684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0078;AVGPOST=0.9960;RSQ=0.7885;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78435685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5903;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78435711 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5747;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78435746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.525;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5756;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78435758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6859;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78435762 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78435794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78435851 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1823;AVGPOST=0.9973;RSQ=0.9920;ERATE=0.0007;THETA=0.0004;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 78435874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7431;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78435891 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0050;AVGPOST=0.9978;RSQ=0.8448;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78435895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4756;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78435903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0725;AVGPOST=0.9960;RSQ=0.9787;ERATE=0.0009;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 78435905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0028;AVGPOST=0.9957;RSQ=0.3719;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78435932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9041;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78436059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5299;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78436079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1611;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0005;THETA=0.0004;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 78436187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0155;AVGPOST=0.9990;RSQ=0.9761;ERATE=0.0003;THETA=0.0053;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78436260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9137;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78436303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.6486;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78437037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.784;LDAF=0.0459;AVGPOST=0.9686;RSQ=0.7199;ERATE=0.0072;THETA=0.0010;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78437104 . A AG 1153 PASS INDEL;BAVGPOST=0.996;BRSQ=0.929;LDAF=0.0277;AVGPOST=0.9949;RSQ=0.9224;ERATE=0.0006;THETA=0.0061;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78437229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9090;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78437327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78437418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78437498 . TTGTC T 833 PASS INDEL;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9362;ERATE=0.0003;THETA=0.0023;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78437695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9384;ERATE=0.0003;THETA=0.0060;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78437733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.848;LDAF=0.0090;AVGPOST=0.9972;RSQ=0.8810;ERATE=0.0004;THETA=0.0064;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78437837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0223;AVGPOST=0.9982;RSQ=0.9657;ERATE=0.0003;THETA=0.0021;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78437892 . AG A 2211 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0221;AVGPOST=0.9979;RSQ=0.9612;ERATE=0.0003;THETA=0.0053;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78437970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78438272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0078;AVGPOST=0.9982;RSQ=0.9174;ERATE=0.0005;THETA=0.0116;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78438396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.3496;ERATE=0.0004;THETA=0.0024;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78438618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0373;AVGPOST=0.9981;RSQ=0.9814;ERATE=0.0004;THETA=0.0055;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78438635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0155;AVGPOST=0.9991;RSQ=0.9758;ERATE=0.0003;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78438839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6493;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78438840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78438921 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78438969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78438983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78438994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0073;AVGPOST=0.9985;RSQ=0.9223;ERATE=0.0003;THETA=0.0020;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78439004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78439072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78439307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78439318 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.885;LDAF=0.0128;AVGPOST=0.9965;RSQ=0.8996;ERATE=0.0003;THETA=0.0027;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78439353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0170;AVGPOST=0.9986;RSQ=0.9685;ERATE=0.0004;THETA=0.0010;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78439451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78439473 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5935;ERATE=0.0003;THETA=0.0101;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78439600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9996;RSQ=0.9759;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78439620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0025;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78439665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8814;ERATE=0.0003;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78439687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0074;AVGPOST=0.9992;RSQ=0.9568;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78439743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0028;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78439854 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0223;AVGPOST=0.9982;RSQ=0.9699;ERATE=0.0004;THETA=0.0015;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78439892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0809;AVGPOST=0.9963;RSQ=0.9816;ERATE=0.0004;THETA=0.0007;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 78439964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78440013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78440115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5828;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78440159 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8083;ERATE=0.0005;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78440174 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7440;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78440186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0817;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 78440270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78440641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.947;LDAF=0.1582;AVGPOST=0.9842;RSQ=0.9562;ERATE=0.0005;THETA=0.0008;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 78440812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8165;AVGPOST=0.9960;RSQ=0.9907;ERATE=0.0003;THETA=0.0007;AC=1783;AN=2184 GT:DS:GL:BD 0.81639194 1
1 78440845 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9172;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78440875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78441183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78441187 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6160;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78441293 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0126;AVGPOST=0.9979;RSQ=0.9296;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78441429 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78441601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.386;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5091;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78441706 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9081;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78441730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78441880 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78441891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78441921 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8559;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78441951 . AATAAT A 4091 PASS INDEL;BAVGPOST=0.994;BRSQ=0.888;LDAF=0.0257;AVGPOST=0.9952;RSQ=0.9347;ERATE=0.0003;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78442034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.930;LDAF=0.0799;AVGPOST=0.9853;RSQ=0.9406;ERATE=0.0012;THETA=0.0196;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 78442252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.901;LDAF=0.0174;AVGPOST=0.9957;RSQ=0.9003;ERATE=0.0018;THETA=0.0168;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78442288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78442300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0005;THETA=0.0359;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78442373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9062;ERATE=0.0005;THETA=0.0083;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78442376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.899;LDAF=0.0907;AVGPOST=0.9747;RSQ=0.8921;ERATE=0.0087;THETA=0.0281;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 78442477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0005;THETA=0.0112;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78442493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7734;ERATE=0.0015;THETA=0.0261;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78442582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0003;THETA=0.0154;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78442589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.6643;ERATE=0.0019;THETA=0.0237;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78442623 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8460;ERATE=0.0003;THETA=0.0212;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78442746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0004;THETA=0.0192;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78442807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6745;ERATE=0.0003;THETA=0.0215;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78442910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0236;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78442924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0407;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78442954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0097;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78442972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6706;ERATE=0.0004;THETA=0.0076;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78443028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0431;AVGPOST=0.9946;RSQ=0.9582;ERATE=0.0006;THETA=0.0096;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 78443137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0114;AVGPOST=0.9978;RSQ=0.9113;ERATE=0.0003;THETA=0.0307;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78443312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0145;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78443353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.512;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4393;ERATE=0.0008;THETA=0.0190;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78443414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0085;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78443415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.912;LDAF=0.2094;AVGPOST=0.9604;RSQ=0.9054;ERATE=0.0052;THETA=0.0032;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 78443465 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.909;LDAF=0.0348;AVGPOST=0.9908;RSQ=0.8984;ERATE=0.0006;THETA=0.0073;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78443507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0123;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78443569 . TA T 100 PASS INDEL;BAVGPOST=0.998;BRSQ=0.623;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6719;ERATE=0.0006;THETA=0.0089;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78443634 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0004;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78443640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4468;ERATE=0.0004;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78443668 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0004;THETA=0.0151;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78443767 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0120;AVGPOST=0.9969;RSQ=0.9027;ERATE=0.0003;THETA=0.0028;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78443880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0003;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78443938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7857;ERATE=0.0004;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78443959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0098;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78444080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0004;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78444148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7143;ERATE=0.0008;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78444245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0101;AVGPOST=0.9966;RSQ=0.8623;ERATE=0.0004;THETA=0.0058;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78444278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9259;ERATE=0.0003;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78444314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78444318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9079;ERATE=0.0003;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78444487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0005;THETA=0.0081;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78444522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78444562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0219;AVGPOST=0.9990;RSQ=0.9817;ERATE=0.0004;THETA=0.0068;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78444619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9662;ERATE=0.0004;THETA=0.0019;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78444674 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0