1092
10000
1 87455462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7785;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87455582 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.767;LDAF=0.0475;AVGPOST=0.9596;RSQ=0.6633;ERATE=0.0091;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 87455657 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2777;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 87455685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87455832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6571;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87455835 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0426;AVGPOST=0.9996;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 87455863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8006;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87455896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0920;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 87455916 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0426;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 87456034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9270;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87456112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87456195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0426;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 87456302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0429;AVGPOST=0.9990;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 87456355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87456465 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9720;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87456483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87456504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0837;AVGPOST=0.9994;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 87456605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0809;AVGPOST=0.9991;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 87456620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1462;AVGPOST=0.9974;RSQ=0.9918;ERATE=0.0004;THETA=0.0006;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87456677 . GTGA G 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5164;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87456736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9983;RSQ=0.1622;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87456856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8423;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87457112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5692;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87457131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5491;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87457134 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1689;AVGPOST=0.9957;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 87457195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7428;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87457242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9989;RSQ=0.9817;ERATE=0.0002;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87457334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9429;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87457434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87457544 . C CA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7727;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87457656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87457661 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1947;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0003;THETA=0.0007;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 87457778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0033;AVGPOST=0.9949;RSQ=0.3995;ERATE=0.0009;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87457816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7058;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87457875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1004;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 87457909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87457992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9896;ERATE=0.0002;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87457997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87458037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0425;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 87458049 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87458068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1517;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 87458101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87458116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0226;AVGPOST=0.9989;RSQ=0.9801;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87458168 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87458199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8215;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87458212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87458215 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0110;AVGPOST=0.9986;RSQ=0.9417;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87458239 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0991;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0002;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 87458309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87458327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87458328 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0467;AVGPOST=0.9990;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 87458373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5006;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87458404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0078;AVGPOST=0.9977;RSQ=0.8796;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87458468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0111;AVGPOST=0.9981;RSQ=0.9350;ERATE=0.0002;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87458475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6560;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87458583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9892;ERATE=0.0002;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87458584 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0256;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0002;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87458602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1292;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0002;THETA=0.0011;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 87458605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0426;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0002;THETA=0.0006;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 87458626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1516;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0002;THETA=0.0006;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 87458711 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9610;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87458865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9653;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87458876 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87458962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87459177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6813;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87459244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87459264 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0070;AVGPOST=0.9986;RSQ=0.9251;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87459449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6302;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87459569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87459774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87459946 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7750;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87459984 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87459993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6467;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87460148 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87460152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0426;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0002;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 87460171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9648;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87460188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.8207;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87460243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0064;AVGPOST=0.9988;RSQ=0.9205;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87460287 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87460373 . TA T 391 PASS INDEL;BAVGPOST=0.963;BRSQ=0.549;LDAF=0.0577;AVGPOST=0.9452;RSQ=0.6221;ERATE=0.0084;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 87460394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6205;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87460404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9729;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87460561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1700;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0002;THETA=0.0007;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 87460618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87460845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3749;AVGPOST=0.9989;RSQ=0.9985;ERATE=0.0003;THETA=0.0006;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 87460852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87460949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0213;AVGPOST=0.9991;RSQ=0.9846;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87461005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3672;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87461037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87461062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9998;RSQ=0.9892;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87461071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.918;LDAF=0.9503;AVGPOST=0.9926;RSQ=0.9368;ERATE=0.0003;THETA=0.0004;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 87461072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87461164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6672;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87461176 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0481;AVGPOST=0.9989;RSQ=0.9902;ERATE=0.0003;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 87461241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87461301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1149;AVGPOST=0.9943;RSQ=0.9852;ERATE=0.0003;THETA=0.0004;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 87461327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.2837;AVGPOST=0.9935;RSQ=0.9890;ERATE=0.0005;THETA=0.0008;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 87461328 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9682;ERATE=0.0002;THETA=0.0028;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87461597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7822;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87461652 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2911;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 87461653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3433;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 87461713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87461745 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9394;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87461764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6188;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87461791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4425;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87461848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1266;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0002;THETA=0.0001;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 87461962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8668;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87462068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8818;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87462112 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87462141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4969;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87462260 . C CT 78 PASS INDEL;BAVGPOST=0.998;BRSQ=0.561;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7461;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87462652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.919;LDAF=0.2399;AVGPOST=0.9566;RSQ=0.9169;ERATE=0.0027;THETA=0.0021;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 87462750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6717;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87462825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0287;AVGPOST=0.9990;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87462837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87462936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.465;LDAF=0.0046;AVGPOST=0.9963;RSQ=0.6538;ERATE=0.0010;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87463034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0213;AVGPOST=0.9963;RSQ=0.9314;ERATE=0.0004;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87463110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9215;ERATE=0.0004;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87463125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87463320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5457;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87463355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6375;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87463360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87463362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.5526;ERATE=0.0004;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87463400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9020;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87463642 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6020;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87463663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6880;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87463720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0441;AVGPOST=0.9978;RSQ=0.9842;ERATE=0.0003;THETA=0.0008;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 87463750 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4917;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87464048 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.839;LDAF=0.0152;AVGPOST=0.9958;RSQ=0.8832;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87464130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8634;ERATE=0.0004;THETA=0.0037;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87464267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.888;LDAF=0.0085;AVGPOST=0.9979;RSQ=0.9037;ERATE=0.0005;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87464300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4922;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87464339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5812;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87464508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.552;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4429;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87464538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0319;AVGPOST=0.9983;RSQ=0.9810;ERATE=0.0005;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 87464712 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9136;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87464723 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8323;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87464878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8226;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87465001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87465113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0130;AVGPOST=0.9962;RSQ=0.8798;ERATE=0.0006;THETA=0.0024;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87465144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0056;AVGPOST=0.9966;RSQ=0.7352;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87465187 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0165;AVGPOST=0.9938;RSQ=0.8481;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87465272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0205;AVGPOST=0.9949;RSQ=0.9013;ERATE=0.0005;THETA=0.0020;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87465356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0290;AVGPOST=0.9969;RSQ=0.9613;ERATE=0.0005;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87465382 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3881;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87465418 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.938;LDAF=0.0554;AVGPOST=0.9942;RSQ=0.9552;ERATE=0.0005;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 87465422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1144;AVGPOST=0.9948;RSQ=0.9817;ERATE=0.0004;THETA=0.0009;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 87465492 . T TA 1149 PASS INDEL;BAVGPOST=0.988;BRSQ=0.753;LDAF=0.0247;AVGPOST=0.9814;RSQ=0.7238;ERATE=0.0032;THETA=0.0006;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87465537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.597;LDAF=0.0143;AVGPOST=0.9842;RSQ=0.5531;ERATE=0.0050;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87465791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87465806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0268;AVGPOST=0.9974;RSQ=0.9655;ERATE=0.0003;THETA=0.0020;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87465816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5150;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87465826 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8713;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87466125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.8115;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87466184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7408;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87466254 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87466365 . G GA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5670;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87466413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9012;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87466418 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9286;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87466456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7968;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87466504 rs72382961 A AT 2778 PASS INDEL;BAVGPOST=0.970;BRSQ=0.792;LDAF=0.0919;AVGPOST=0.9343;RSQ=0.6924;ERATE=0.0167;THETA=0.0025;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 87466610 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0052;AVGPOST=0.9974;RSQ=0.8121;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87466669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0295;AVGPOST=0.9975;RSQ=0.9725;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87466813 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87466922 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0434;AVGPOST=0.9989;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 87466973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0531;AVGPOST=0.9982;RSQ=0.9877;ERATE=0.0004;THETA=0.0010;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 87467014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87467249 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2976;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 87467292 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8734;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87467522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9390;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87467534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0228;AVGPOST=0.9983;RSQ=0.9696;ERATE=0.0002;THETA=0.0002;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87467554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6125;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87467594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87467717 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0002;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87467730 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2994;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 87467739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5496;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87467755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0045;AVGPOST=0.9985;RSQ=0.8873;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87467764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0028;AVGPOST=0.9961;RSQ=0.5328;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87467857 . GTTA G 8 PASS INDEL;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0073;AVGPOST=0.9919;RSQ=0.5699;ERATE=0.0024;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87467898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8946;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87467968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5033;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87468050 . TTA T 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8749;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87468072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.9156;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87468173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2991;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 87468198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3006;AVGPOST=0.9959;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 87468201 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0002;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87468224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9194;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87468265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3003;AVGPOST=0.9975;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 87468475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5239;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87468591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6619;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87468644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2975;AVGPOST=0.9951;RSQ=0.9919;ERATE=0.0004;THETA=0.0004;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 87468665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0070;AVGPOST=0.9986;RSQ=0.9281;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87468980 . CTT C 687 PASS INDEL;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0067;AVGPOST=0.9977;RSQ=0.8442;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87469083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.6927;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87469128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0066;AVGPOST=0.9986;RSQ=0.9253;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87469133 . AAG A 6533 PASS INDEL;BAVGPOST=0.965;BRSQ=0.918;LDAF=0.2586;AVGPOST=0.9501;RSQ=0.9079;ERATE=0.0029;THETA=0.0006;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 87469223 . AGAG A 46957 PASS INDEL;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.2927;AVGPOST=0.9902;RSQ=0.9843;ERATE=0.0007;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 87469224 rs10584341 GAGA G 9898 PASS INDEL;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.2926;AVGPOST=0.9908;RSQ=0.9852;ERATE=0.0004;THETA=0.0005;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 87469228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87469258 . CAA C 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6878;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87469312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87469326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87469428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87469501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87469519 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9685;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87469527 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1037;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0002;THETA=0.0004;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 87469565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7246;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87469592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5741;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87469619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87469650 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1039;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 87469658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5265;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87469960 . GAC G 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7789;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87470121 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3238;AVGPOST=0.9961;RSQ=0.9932;ERATE=0.0006;THETA=0.0008;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 87470194 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8585;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87470195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87470204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8928;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87470304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87470407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87470455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0381;AVGPOST=0.9994;RSQ=0.9948;ERATE=0.0002;THETA=0.0031;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 87470469 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4928;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87470486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3110;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0005;THETA=0.0004;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 87470508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87470808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87470849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2850;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 87470890 . A AC 37506 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2771;AVGPOST=0.9951;RSQ=0.9909;ERATE=0.0009;THETA=0.0002;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 87470958 . C CT 10256 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2764;AVGPOST=0.9978;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 87470959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6767;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87470995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87471300 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9386;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87471312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6310;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87471332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1042;AVGPOST=0.9984;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 87471360 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.9537;AVGPOST=0.9983;RSQ=0.9826;ERATE=0.0004;THETA=0.0023;AC=2083;AN=2184 GT:DS:GL:BD 0.95375460 1
1 87471508 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6658;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87471636 . G GA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6645;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87471729 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3191;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0005;THETA=0.0003;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 87471820 . TC T 7851 PASS INDEL;BAVGPOST=0.905;BRSQ=0.792;LDAF=0.2605;AVGPOST=0.9165;RSQ=0.8517;ERATE=0.0091;THETA=0.0005;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 87471895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.3115;AVGPOST=0.9830;RSQ=0.9728;ERATE=0.0011;THETA=0.0002;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 87471896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87472081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87472124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3193;AVGPOST=0.9940;RSQ=0.9893;ERATE=0.0011;THETA=0.0005;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 87472239 . ACTAT A 35 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9289;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87472243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.669;LDAF=0.0164;AVGPOST=0.9899;RSQ=0.7598;ERATE=0.0006;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87472279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.656;LDAF=0.0270;AVGPOST=0.9801;RSQ=0.7104;ERATE=0.0019;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 87472284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.751;LDAF=0.0355;AVGPOST=0.9807;RSQ=0.7854;ERATE=0.0015;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 87472295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.483;LDAF=0.0306;AVGPOST=0.9673;RSQ=0.5668;ERATE=0.0049;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87472306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.680;LDAF=0.0123;AVGPOST=0.9876;RSQ=0.5985;ERATE=0.0013;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87472333 . GA G 759 PASS INDEL;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0112;AVGPOST=0.9978;RSQ=0.9118;ERATE=0.0005;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87472477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87472505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0276;AVGPOST=0.9978;RSQ=0.9659;ERATE=0.0004;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87472535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.7545;AVGPOST=0.9837;RSQ=0.9650;ERATE=0.0006;THETA=0.0013;AC=1649;AN=2184 GT:DS:GL:BD 0.75503665 1
1 87472631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8712;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87472653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.838;LDAF=0.0149;AVGPOST=0.9920;RSQ=0.7753;ERATE=0.0007;THETA=0.0018;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87472674 . GGGGGGATAGTGTA G 12814 PASS INDEL;BAVGPOST=0.848;BRSQ=0.735;LDAF=0.4860;AVGPOST=0.8074;RSQ=0.7048;ERATE=0.0139;THETA=0.0004;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 87472818 . G GA 95 PASS INDEL;BAVGPOST=0.809;BRSQ=0.164;LDAF=0.1492;AVGPOST=0.8303;RSQ=0.4742;ERATE=0.0081;THETA=0.0005;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 87472836 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.863;LDAF=0.2368;AVGPOST=0.8604;RSQ=0.7007;ERATE=0.0094;THETA=0.0008;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 87472895 . G GA 123 PASS INDEL;BAVGPOST=0.991;BRSQ=0.614;LDAF=0.0137;AVGPOST=0.9950;RSQ=0.8407;ERATE=0.0008;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87472915 . A AG 50 PASS INDEL;BAVGPOST=0.995;BRSQ=0.729;LDAF=0.0279;AVGPOST=0.9733;RSQ=0.6151;ERATE=0.0020;THETA=0.0006;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 87472923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0047;AVGPOST=0.9953;RSQ=0.5881;ERATE=0.0007;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87472996 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0449;AVGPOST=0.9959;RSQ=0.9654;ERATE=0.0005;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 87473174 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8261;ERATE=0.0005;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87473424 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.607;LDAF=0.0070;AVGPOST=0.9956;RSQ=0.7550;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87473437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0441;AVGPOST=0.9977;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 87473505 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1001;AVGPOST=0.9954;RSQ=0.9788;ERATE=0.0005;THETA=0.0006;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 87473509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0098;AVGPOST=0.9985;RSQ=0.9365;ERATE=0.0004;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87473525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0044;AVGPOST=0.9946;RSQ=0.5312;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87473526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6066;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87473543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8720;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87473614 . TA T 271 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8423;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87473633 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6038;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87473885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0101;AVGPOST=0.9995;RSQ=0.9766;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87474035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0574;AVGPOST=0.9988;RSQ=0.9923;ERATE=0.0004;THETA=0.0011;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 87474209 . GA G 155 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5131;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87474247 . GGGATAGTGCAGGA G 1678 PASS INDEL;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0123;AVGPOST=0.9970;RSQ=0.8951;ERATE=0.0006;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87474271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6529;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87474293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7011;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87474339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8055;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87474342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0092;AVGPOST=0.9994;RSQ=0.9709;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87474494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0093;AVGPOST=0.9991;RSQ=0.9599;ERATE=0.0004;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87474495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8036;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87474705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0226;AVGPOST=0.9988;RSQ=0.9810;ERATE=0.0002;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87474875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0102;AVGPOST=0.9994;RSQ=0.9700;ERATE=0.0003;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87475025 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87475045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5034;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87475166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8069;ERATE=0.0002;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87475304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9204;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87475381 . AG A 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4422;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87475388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6964;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87475448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87475488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0106;AVGPOST=0.9989;RSQ=0.9645;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87475632 . GC G 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5142;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87475670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0042;AVGPOST=0.9966;RSQ=0.7060;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87475697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1814;AVGPOST=0.9977;RSQ=0.9936;ERATE=0.0004;THETA=0.0005;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 87475761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5196;ERATE=0.0007;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87475930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6108;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87476057 . C CG 139 PASS INDEL;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0067;AVGPOST=0.9950;RSQ=0.7537;ERATE=0.0005;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87476059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87476184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.970;LDAF=0.0976;AVGPOST=0.9958;RSQ=0.9805;ERATE=0.0006;THETA=0.0007;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 87476324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0175;AVGPOST=0.9947;RSQ=0.8777;ERATE=0.0004;THETA=0.0016;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87476348 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87476472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.8954;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87476674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9375;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87476815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7643;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87476899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8523;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87476900 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0567;AVGPOST=0.9987;RSQ=0.9913;ERATE=0.0004;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 87476909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0564;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0002;THETA=0.0007;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 87476934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87477067 . G GA 313 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9418;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87477321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6337;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87477544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.762;LDAF=0.0097;AVGPOST=0.9958;RSQ=0.8126;ERATE=0.0007;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87477638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0130;AVGPOST=0.9990;RSQ=0.9633;ERATE=0.0005;THETA=0.0019;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87477738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0004;THETA=0.0040;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87477828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5712;AVGPOST=0.9901;RSQ=0.9857;ERATE=0.0008;THETA=0.0006;AC=1251;AN=2184 GT:DS:GL:BD 0.57280219 1
1 87477950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8026;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87478069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0122;AVGPOST=0.9985;RSQ=0.9524;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87478096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87478140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9221;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87478143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87478171 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6272;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87478256 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.541;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3274;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87478387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.963;LDAF=0.1448;AVGPOST=0.9971;RSQ=0.9898;ERATE=0.0007;THETA=0.0004;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 87478465 . C CA 85 PASS INDEL;BAVGPOST=0.993;BRSQ=0.471;LDAF=0.0132;AVGPOST=0.9836;RSQ=0.5085;ERATE=0.0031;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87478503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4154;ERATE=0.0006;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87478526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8845;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87478530 . C CA 611 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9438;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87478611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.3169;AVGPOST=0.9827;RSQ=0.9678;ERATE=0.0029;THETA=0.0005;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 87478649 . GA G 501 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9388;ERATE=0.0004;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87478779 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87478910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9259;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87479066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0051;AVGPOST=0.9964;RSQ=0.7237;ERATE=0.0008;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87479072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8328;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87479120 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9279;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87479151 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9587;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87479156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5873;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87479191 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6511;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87479201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9379;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87479205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87479228 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2225;AVGPOST=0.9969;RSQ=0.9922;ERATE=0.0011;THETA=0.0005;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 87479240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0990;AVGPOST=0.9991;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 87479329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0967;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0003;THETA=0.0010;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87479330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0144;AVGPOST=0.9974;RSQ=0.9214;ERATE=0.0004;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87479398 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87479416 rs112814354 CAGA C 25011 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2229;AVGPOST=0.9964;RSQ=0.9915;ERATE=0.0005;THETA=0.0003;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 87479430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87479588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5174;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87479657 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0124;AVGPOST=0.9974;RSQ=0.9180;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87479687 . T TC 4417 PASS INDEL;BAVGPOST=0.990;BRSQ=0.956;LDAF=0.0977;AVGPOST=0.9936;RSQ=0.9768;ERATE=0.0010;THETA=0.0002;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 87479700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.860;LDAF=0.4129;AVGPOST=0.9034;RSQ=0.8493;ERATE=0.0118;THETA=0.0005;AC=940;AN=2184 GT:DS:GL:BD 0.43040293 0
1 87479720 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.881;LDAF=0.5381;AVGPOST=0.9450;RSQ=0.9243;ERATE=0.0038;THETA=0.0006;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 87479745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.655;LDAF=0.0082;AVGPOST=0.9908;RSQ=0.5511;ERATE=0.0008;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87479760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.2229;AVGPOST=0.9922;RSQ=0.9808;ERATE=0.0011;THETA=0.0003;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 87479783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0879;AVGPOST=0.9977;RSQ=0.9903;ERATE=0.0005;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 87479853 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.0960;AVGPOST=0.9979;RSQ=0.9917;ERATE=0.0004;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87479913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0039;AVGPOST=0.9977;RSQ=0.7391;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87479918 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.0962;AVGPOST=0.9971;RSQ=0.9883;ERATE=0.0007;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87479928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9009;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87479947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.751;LDAF=0.0053;AVGPOST=0.9950;RSQ=0.6217;ERATE=0.0011;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87479949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8223;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87479951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0979;AVGPOST=0.9966;RSQ=0.9868;ERATE=0.0005;THETA=0.0003;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 87479977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3405;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87479978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0966;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87480025 . CAAAT C 122 PASS INDEL;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4771;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87480059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.0966;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87480096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0109;AVGPOST=0.9987;RSQ=0.9487;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87480165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1497;AVGPOST=0.9974;RSQ=0.9923;ERATE=0.0005;THETA=0.0003;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 87480198 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87480270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87480345 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0915;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 87480360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0963;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87480396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87480426 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0912;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 87480435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7213;ERATE=0.0011;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87480456 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87480495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0053;AVGPOST=0.9996;RSQ=0.9762;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87480508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0965;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87480514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87480546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7223;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87480586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9997;RSQ=0.0664;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 87480602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87480619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87480696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7640;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87480736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87480781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87480795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2217;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 87480805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8185;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87480813 . TG T 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87480945 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87480950 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3172;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 87480980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87480993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5687;AVGPOST=0.9975;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 87481035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8640;ERATE=0.0011;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87481082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0056;AVGPOST=0.9978;RSQ=0.8258;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87481135 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.779;LDAF=0.0044;AVGPOST=0.9982;RSQ=0.8246;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87481171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0877;AVGPOST=0.9971;RSQ=0.9863;ERATE=0.0005;THETA=0.0002;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 87481207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87481220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0061;AVGPOST=0.9975;RSQ=0.8297;ERATE=0.0008;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87481234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87481260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0955;AVGPOST=0.9980;RSQ=0.9933;ERATE=0.0005;THETA=0.0002;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 87481386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87481388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.5465;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87481501 rs10660453 T TTA 10251 PASS INDEL;BAVGPOST=0.939;BRSQ=0.868;LDAF=0.2409;AVGPOST=0.9094;RSQ=0.8304;ERATE=0.0095;THETA=0.0003;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 87481556 . A ATG 3210 PASS INDEL;BAVGPOST=0.939;BRSQ=0.856;LDAF=0.2157;AVGPOST=0.9051;RSQ=0.8050;ERATE=0.0112;THETA=0.0006;AC=459;AN=2184 GT:DS:GL:BD 0.21016483 0
1 87481560 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0060;AVGPOST=0.9985;RSQ=0.9154;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87481651 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8680;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87481657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.0894;AVGPOST=0.9982;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 87481699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87481737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2216;AVGPOST=0.9988;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 87481755 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0046;AVGPOST=0.9971;RSQ=0.7522;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87481782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5020;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87481941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2218;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0006;THETA=0.0003;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 87481956 . A AC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7325;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87481989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.537;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6616;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87481990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7828;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87482044 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7556;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87482076 . TTC T 163 PASS INDEL;BAVGPOST=0.959;BRSQ=0.675;LDAF=0.0656;AVGPOST=0.9600;RSQ=0.7772;ERATE=0.0024;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 87482102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0126;AVGPOST=0.9991;RSQ=0.9688;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87482107 . TTCTA T 1873 PASS INDEL;BAVGPOST=0.985;BRSQ=0.916;LDAF=0.0931;AVGPOST=0.9910;RSQ=0.9603;ERATE=0.0006;THETA=0.0004;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 87482120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9290;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87482183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5660;AVGPOST=0.9964;RSQ=0.9944;ERATE=0.0006;THETA=0.0003;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 87482187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5365;ERATE=0.0010;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87482250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9234;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87482271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0259;AVGPOST=0.9970;RSQ=0.9550;ERATE=0.0003;THETA=0.0105;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87482434 . GTGTC G 479 PASS INDEL;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87482481 rs34483531 C CAT 15381 PASS INDEL;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1177;AVGPOST=0.9837;RSQ=0.9472;ERATE=0.0004;THETA=0.0005;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 87482535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0112;AVGPOST=0.9988;RSQ=0.9530;ERATE=0.0006;THETA=0.0029;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87482538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.856;LDAF=0.0294;AVGPOST=0.9952;RSQ=0.9359;ERATE=0.0004;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87482573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0356;AVGPOST=0.9978;RSQ=0.9733;ERATE=0.0004;THETA=0.0009;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87482593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0526;AVGPOST=0.9939;RSQ=0.9615;ERATE=0.0007;THETA=0.0006;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 87482604 rs111521360 TAC T 69 PASS INDEL;BAVGPOST=0.994;BRSQ=0.621;LDAF=0.0080;AVGPOST=0.9936;RSQ=0.6879;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87482604 . CAT C 27 PASS INDEL;BAVGPOST=0.998;BRSQ=0.576;LDAF=0.0055;AVGPOST=0.9949;RSQ=0.6411;ERATE=0.0007;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87482608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.467;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7568;ERATE=0.0006;THETA=0.0030;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87482615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87482620 . ACG A 4534 PASS INDEL;BAVGPOST=0.989;BRSQ=0.931;LDAF=0.0647;AVGPOST=0.9842;RSQ=0.9040;ERATE=0.0013;THETA=0.0008;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 87482630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.896;LDAF=0.1290;AVGPOST=0.9725;RSQ=0.9185;ERATE=0.0013;THETA=0.0011;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 87482631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.616;LDAF=0.0072;AVGPOST=0.9939;RSQ=0.7030;ERATE=0.0008;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87482632 . CACATATATAT C 9858 PASS INDEL;BAVGPOST=0.985;BRSQ=0.873;LDAF=0.0477;AVGPOST=0.9926;RSQ=0.9473;ERATE=0.0005;THETA=0.0008;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 87482673 . CAT C 233 PASS INDEL;BAVGPOST=0.963;BRSQ=0.677;LDAF=0.0444;AVGPOST=0.9844;RSQ=0.8629;ERATE=0.0015;THETA=0.0031;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 87482685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87482746 . CATAT C 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5630;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87482750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0039;AVGPOST=0.9974;RSQ=0.7603;ERATE=0.0003;THETA=0.0028;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87482751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7553;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87482809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8940;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87482875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0005;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87482877 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0331;AVGPOST=0.9960;RSQ=0.9562;ERATE=0.0003;THETA=0.0016;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 87482883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0175;AVGPOST=0.9941;RSQ=0.8858;ERATE=0.0004;THETA=0.0014;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87482895 . AAC A 132 PASS INDEL;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0053;AVGPOST=0.9963;RSQ=0.7306;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87482940 . ACAC A 1084 PASS INDEL;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0055;AVGPOST=0.9968;RSQ=0.7871;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87482941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.536;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5624;ERATE=0.0005;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87482957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5669;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87482958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5875;ERATE=0.0009;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87483013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4891;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87483023 . GATAC G 296 PASS INDEL;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8599;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87483073 . TAG T 273 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0061;AVGPOST=0.9945;RSQ=0.6267;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87483100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.840;LDAF=0.0102;AVGPOST=0.9949;RSQ=0.8152;ERATE=0.0005;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87483119 . CATAT C 1036 PASS INDEL;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0060;AVGPOST=0.9962;RSQ=0.7308;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87483156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87483200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87483214 . T TAC 879 PASS INDEL;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0112;AVGPOST=0.9946;RSQ=0.8135;ERATE=0.0007;THETA=0.0020;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87483321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0269;AVGPOST=0.9954;RSQ=0.9307;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87483324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.489;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7329;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87483327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.927;LDAF=0.0388;AVGPOST=0.9944;RSQ=0.9432;ERATE=0.0006;THETA=0.0004;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 87483376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0064;AVGPOST=0.9950;RSQ=0.6575;ERATE=0.0010;THETA=0.0039;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87483396 . CAT C 4997 PASS INDEL;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0348;AVGPOST=0.9989;RSQ=0.9869;ERATE=0.0004;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 87483475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4620;AVGPOST=0.9891;RSQ=0.9832;ERATE=0.0008;THETA=0.0003;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 87483492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0072;AVGPOST=0.9898;RSQ=0.4493;ERATE=0.0015;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87483521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0184;AVGPOST=0.9869;RSQ=0.7442;ERATE=0.0007;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87483562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0084;AVGPOST=0.9968;RSQ=0.8389;ERATE=0.0007;THETA=0.0022;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87483614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7042;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87483655 . AAC A 170 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5118;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87483662 . CATAT C 333 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7684;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87483674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87483694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87483815 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9995;RSQ=0.9935;ERATE=0.0003;THETA=0.0009;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 87483847 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0348;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 87483931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87484195 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87484385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0070;AVGPOST=0.9975;RSQ=0.8577;ERATE=0.0007;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87484431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87484501 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0039;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87484534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87484549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7770;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87484559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0347;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0010;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 87484617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1203;AVGPOST=0.9976;RSQ=0.9926;ERATE=0.0005;THETA=0.0006;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 87484654 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2676;AVGPOST=0.9976;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 87484656 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7329;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87484674 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6677;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87484725 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6704;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87484829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7971;ERATE=0.0004;THETA=0.0040;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87484883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6365;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87484888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8406;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87485000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8089;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87485038 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87485097 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8877;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87485106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2239;AVGPOST=0.9972;RSQ=0.9939;ERATE=0.0005;THETA=0.0003;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 87485133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6541;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87485159 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.9305;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87485219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0048;AVGPOST=0.9955;RSQ=0.6514;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87485268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7515;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87485292 . A AAC 27050 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6967;AVGPOST=0.9899;RSQ=0.9847;ERATE=0.0006;THETA=0.0004;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 87485588 rs72513652 C CAA 84047 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6992;AVGPOST=0.9925;RSQ=0.9883;ERATE=0.0006;THETA=0.0006;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 87485590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.845;LDAF=0.0047;AVGPOST=0.9980;RSQ=0.8236;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87485659 . TA T 203 PASS INDEL;BAVGPOST=0.996;BRSQ=0.789;LDAF=0.0097;AVGPOST=0.9923;RSQ=0.6718;ERATE=0.0011;THETA=0.0037;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87485695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.723;LDAF=0.0050;AVGPOST=0.9969;RSQ=0.7595;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87485787 . AT A 457 PASS INDEL;BAVGPOST=0.955;BRSQ=0.544;LDAF=0.0776;AVGPOST=0.9160;RSQ=0.5387;ERATE=0.0112;THETA=0.0002;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 87485850 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2406;AVGPOST=0.9968;RSQ=0.9929;ERATE=0.0005;THETA=0.0002;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 87485858 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0082;AVGPOST=0.9978;RSQ=0.8813;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87485859 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8898;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87486032 . GC G 25 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87486045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0219;AVGPOST=0.9997;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87486065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9047;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87486110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5043;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87486150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5602;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87486306 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9201;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87486328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4831;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87486401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.9105;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87486516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1187;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 87486537 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.870;LDAF=0.0283;AVGPOST=0.9926;RSQ=0.9008;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87486573 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6245;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87486624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87486839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6979;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0002;AC=1527;AN=2184 GT:DS:GL:BD 0.69917583 1
1 87486845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87486855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87486865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87486907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.7910;ERATE=0.0035;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87486936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1216;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0002;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 87486968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87486973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87487009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0009;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87487032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2322;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0003;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 87487064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2148;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 87487113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8402;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87487174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8666;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87487192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0132;AVGPOST=0.9986;RSQ=0.9531;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87487237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.460;LDAF=0.0061;AVGPOST=0.9968;RSQ=0.7939;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87487270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4529;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87487306 . G GT 4 PASS INDEL;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0023;AVGPOST=0.9963;RSQ=0.3334;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87487346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6455;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87487362 . A AG 105 PASS INDEL;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4634;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87487394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87487413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5190;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 87487796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0259;AVGPOST=0.9993;RSQ=0.9882;ERATE=0.0004;THETA=0.0007;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87487830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5194;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87487897 . A AG 1879 PASS INDEL;BAVGPOST=0.986;BRSQ=0.750;LDAF=0.0393;AVGPOST=0.9673;RSQ=0.6763;ERATE=0.0054;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87487917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.974;LDAF=0.5101;AVGPOST=0.9794;RSQ=0.9701;ERATE=0.0050;THETA=0.0004;AC=1117;AN=2184 GT:DS:GL:BD 0.51144689 1
1 87487918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4891;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87487973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4658;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87488038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0089;AVGPOST=0.9987;RSQ=0.9339;ERATE=0.0005;THETA=0.0030;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87488103 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0054;AVGPOST=0.9986;RSQ=0.8968;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87488292 . TTTAAC T 2957 PASS INDEL;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0177;AVGPOST=0.9973;RSQ=0.9444;ERATE=0.0004;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87488297 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87488321 rs35468792 AT A 17956 PASS INDEL;BAVGPOST=0.984;BRSQ=0.966;LDAF=0.2401;AVGPOST=0.9798;RSQ=0.9603;ERATE=0.0012;THETA=0.0012;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 87488414 . GCTCT G 1424 PASS INDEL;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0167;AVGPOST=0.9965;RSQ=0.9199;ERATE=0.0004;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87488418 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0047;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87488623 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87488682 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87488752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87488775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87488819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87488915 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87488966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87489018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87489195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87489286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87489552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87489665 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87489666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87489683 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0011;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87489981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87490062 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87490098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0011;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87490257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5570;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87490297 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8061;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87490317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87490329 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87490561 . A ACATCGC 266 PASS INDEL;BAVGPOST=0.995;BRSQ=0.576;LDAF=0.0080;AVGPOST=0.9962;RSQ=0.7967;ERATE=0.0005;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87490622 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87490649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.8076;ERATE=0.0005;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87490671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0049;AVGPOST=0.9972;RSQ=0.8174;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87490739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9990;RSQ=0.9540;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87490842 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87490903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87490935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9898;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87490957 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87490985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87491246 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87491302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87491327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87491440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9999;RSQ=0.9922;ERATE=0.0003;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87491635 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87491711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0281;AVGPOST=0.9994;RSQ=0.9907;ERATE=0.0003;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87491898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5081;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87491910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0068;AVGPOST=0.9985;RSQ=0.9015;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87491952 . TAC T 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7056;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87492060 . TCAAA T 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4846;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87492113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87492628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87492747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87492748 . ATGGTT A 988 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9260;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87492958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9270;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87493002 rs67571779 AAT A 53289 PASS INDEL;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4114;AVGPOST=0.9955;RSQ=0.9933;ERATE=0.0011;THETA=0.0005;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 87493051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7955;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87493138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8480;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87493150 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9623;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87493212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87493263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7258;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=1583;AN=2184 GT:DS:GL:BD 0.72481686 1
1 87493311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1388;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 87493327 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0186;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87493343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87493421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5825;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87493465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7173;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87493607 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0202;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0004;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87493632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8201;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87493654 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0219;AVGPOST=0.9986;RSQ=0.9753;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87493671 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0042;AVGPOST=0.9966;RSQ=0.6859;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87493709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87493738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7602;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87493751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9883;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87493772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87493906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87494091 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87494236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87494403 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6905;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87494404 . A AGATTG 2108 PASS INDEL;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0073;AVGPOST=0.9987;RSQ=0.9333;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87494442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9746;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87494481 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5780;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87494566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4150;AVGPOST=0.9965;RSQ=0.9953;ERATE=0.0006;THETA=0.0002;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 87494590 . CAT C 440 PASS INDEL;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8957;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87494649 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4157;AVGPOST=0.9981;RSQ=0.9974;ERATE=0.0005;THETA=0.0002;AC=907;AN=2184 GT:DS:GL:BD 0.41529304 0
1 87494730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87494826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87494831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87494833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7268;AVGPOST=0.9965;RSQ=0.9938;ERATE=0.0007;THETA=0.0002;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 87494871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9427;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87494883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87494907 . TCTTA T 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5045;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87494938 . CTGTTTTTGTT C 526 PASS INDEL;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0050;AVGPOST=0.9981;RSQ=0.8541;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87494943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8747;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87494975 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.1639;AVGPOST=0.9974;RSQ=0.9938;ERATE=0.0006;THETA=0.0002;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 87495054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6560;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87495191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6368;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87495261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4908;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87495269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7882;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87495308 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87495315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4177;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0004;THETA=0.0001;AC=914;AN=2184 GT:DS:GL:BD 0.41849816 0
1 87495523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8670;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87495688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87495710 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87495918 . TAGTG T 470 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0037;AVGPOST=0.9962;RSQ=0.5758;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87495933 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8811;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87495965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6274;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87496030 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87496037 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87496090 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8655;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87496303 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.6066;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87496308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87496325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87496366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9098;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87496537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87496556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1997;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 87496632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0251;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87496671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0001;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87496692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87496712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9442;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87496775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87496792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4174;AVGPOST=0.9996;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=912;AN=2184 GT:DS:GL:BD 0.41758242 0
1 87496813 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5605;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87496821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9968;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 87496886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87496893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87496915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8927;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87496945 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87497049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1629;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 87497109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1608;AVGPOST=0.9967;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 87497226 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5170;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87497230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5948;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87497364 . T TC 2692 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0257;AVGPOST=0.9989;RSQ=0.9805;ERATE=0.0005;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87497452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7282;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=1590;AN=2184 GT:DS:GL:BD 0.72802198 1
1 87497515 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1608;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0010;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 87497571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87497605 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5918;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87497647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.8035;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87497655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0074;AVGPOST=0.9991;RSQ=0.9464;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87497659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0045;AVGPOST=0.9994;RSQ=0.9449;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87497664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9994;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87497848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87497918 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0201;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0002;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87498065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0058;AVGPOST=0.9970;RSQ=0.8127;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87498130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3311;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87498187 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0313;AVGPOST=0.9988;RSQ=0.9851;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 87498199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0311;AVGPOST=0.9993;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 87498204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.428;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4590;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87498412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7352;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87498429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9486;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87498522 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.941;LDAF=0.0435;AVGPOST=0.9930;RSQ=0.9331;ERATE=0.0004;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 87498587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87498709 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87498777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1117;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0002;THETA=0.0013;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 87498859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1118;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 87498919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87499150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 87499253 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87499308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8339;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87499331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87499478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5351;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87499518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0053;AVGPOST=0.9912;RSQ=0.4406;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87499519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0084;AVGPOST=0.9968;RSQ=0.8412;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87499543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0054;AVGPOST=0.9972;RSQ=0.7641;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87499566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.936;LDAF=0.3841;AVGPOST=0.9623;RSQ=0.9425;ERATE=0.0045;THETA=0.0008;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 87499599 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0151;AVGPOST=0.9931;RSQ=0.8491;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87499608 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.853;LDAF=0.8716;AVGPOST=0.9320;RSQ=0.7833;ERATE=0.0066;THETA=0.0004;AC=1951;AN=2184 GT:DS:GL:BD 0.89331502 1
1 87499619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8992;AVGPOST=0.9982;RSQ=0.9924;ERATE=0.0004;THETA=0.0003;AC=1965;AN=2184 GT:DS:GL:BD 0.89972526 1
1 87499802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9101;AVGPOST=0.9993;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 87499865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9629;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87499875 rs5781743 GT G 77855 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8988;AVGPOST=0.9979;RSQ=0.9915;ERATE=0.0007;THETA=0.0007;AC=1964;AN=2184 GT:DS:GL:BD 0.89926738 1
1 87500106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8953;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87500177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0133;AVGPOST=0.9996;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87500192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8183;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87500261 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8518;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87500638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87500770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87500777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7753;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87500978 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0313;AVGPOST=0.9991;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 87501025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9417;AVGPOST=0.9989;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=2057;AN=2184 GT:DS:GL:BD 0.94184983 1
1 87501045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5670;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87501066 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87501161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0285;AVGPOST=0.9978;RSQ=0.9750;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87501322 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1112;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 87501323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87501345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1125;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0003;THETA=0.0007;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 87501398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6380;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87501403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87501457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8999;AVGPOST=0.9986;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=1965;AN=2184 GT:DS:GL:BD 0.89972526 1
1 87501486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6310;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87501515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0041;AVGPOST=0.9973;RSQ=0.7396;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87501623 . TA T 514 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9958;RSQ=0.8935;ERATE=0.0005;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87501638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5781;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87501668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.9104;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0004;THETA=0.0008;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 87501748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.9104;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0034;AC=1988;AN=2184 GT:DS:GL:BD 0.91025639 1
1 87501780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5586;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87501817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87501882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0121;AVGPOST=0.9975;RSQ=0.9234;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87501914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9210;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87501950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0035;AVGPOST=0.9961;RSQ=0.5589;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87501953 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0063;AVGPOST=0.9965;RSQ=0.7537;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87501977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3863;ERATE=0.0005;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87502021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.3877;AVGPOST=0.9956;RSQ=0.9929;ERATE=0.0004;THETA=0.0005;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 87502108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.9022;AVGPOST=0.9985;RSQ=0.9928;ERATE=0.0003;THETA=0.0019;AC=1971;AN=2184 GT:DS:GL:BD 0.90247256 1
1 87502116 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9756;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87502121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87502311 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8418;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87502336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0040;AVGPOST=0.9973;RSQ=0.7312;ERATE=0.0004;THETA=0.0163;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87502340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5603;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87502357 . TTC T 97 PASS INDEL;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0108;AVGPOST=0.9989;RSQ=0.9612;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87502417 . TC T 2228 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9763;ERATE=0.0003;THETA=0.0066;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87502418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3293;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0005;THETA=0.0145;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 87502423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6068;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87502699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9875;ERATE=0.0003;THETA=0.0036;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87502793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5965;AVGPOST=0.9935;RSQ=0.9898;ERATE=0.0006;THETA=0.0007;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 87502797 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87502846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87502876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0109;AVGPOST=0.9990;RSQ=0.9650;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87502973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0075;AVGPOST=0.9971;RSQ=0.8351;ERATE=0.0003;THETA=0.0069;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87503031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.931;LDAF=0.0289;AVGPOST=0.9966;RSQ=0.9516;ERATE=0.0005;THETA=0.0009;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 87503040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5430;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87503050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.5801;AVGPOST=0.9918;RSQ=0.9862;ERATE=0.0011;THETA=0.0007;AC=1264;AN=2184 GT:DS:GL:BD 0.57875460 1
1 87503448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87503498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9522;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87503534 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0048;AVGPOST=0.9974;RSQ=0.7788;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87503579 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.7097;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87503644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0101;AVGPOST=0.9996;RSQ=0.9810;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87503717 . TAGGTG T 2122 PASS INDEL;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0082;AVGPOST=0.9990;RSQ=0.9455;ERATE=0.0005;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87503732 . AAGTTG A 2126 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9598;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87503739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0574;AVGPOST=0.9989;RSQ=0.9928;ERATE=0.0004;THETA=0.0008;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 87503786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8193;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87504196 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87504289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.3689;AVGPOST=0.9909;RSQ=0.9861;ERATE=0.0013;THETA=0.0008;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 87504293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87504299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9858;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87504307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7934;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87504337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0034;AVGPOST=0.9966;RSQ=0.5476;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87504365 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.934;LDAF=0.5484;AVGPOST=0.9563;RSQ=0.9325;ERATE=0.0071;THETA=0.0007;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 87504525 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.946;LDAF=0.6886;AVGPOST=0.9724;RSQ=0.9525;ERATE=0.0014;THETA=0.0017;AC=1521;AN=2184 GT:DS:GL:BD 0.69642860 1
1 87504552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6743;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87504586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0268;AVGPOST=0.9993;RSQ=0.9903;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87504703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.913;LDAF=0.0250;AVGPOST=0.9954;RSQ=0.9278;ERATE=0.0004;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87504716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7018;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87504786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87504916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7574;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87504923 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87504964 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8634;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87505087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87505314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87505342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87505364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7737;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87505419 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7469;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87505573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1230;AVGPOST=0.9980;RSQ=0.9942;ERATE=0.0005;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 87505598 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7049;AVGPOST=0.9977;RSQ=0.9951;ERATE=0.0007;THETA=0.0003;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 87505644 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4613;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87505679 . AATT A 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7284;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87505831 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87505863 . T TA 173 PASS INDEL;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0048;AVGPOST=0.9958;RSQ=0.6064;ERATE=0.0013;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87505871 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.918;LDAF=0.6585;AVGPOST=0.9382;RSQ=0.8929;ERATE=0.0137;THETA=0.0005;AC=1467;AN=2184 GT:DS:GL:BD 0.67170328 1
1 87505901 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.965;LDAF=0.6864;AVGPOST=0.9788;RSQ=0.9628;ERATE=0.0018;THETA=0.0013;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 87505965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7055;AVGPOST=0.9913;RSQ=0.9837;ERATE=0.0015;THETA=0.0003;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 87506083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.910;LDAF=0.6627;AVGPOST=0.9239;RSQ=0.8682;ERATE=0.0121;THETA=0.0002;AC=1487;AN=2184 GT:DS:GL:BD 0.68086082 1
1 87506380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5376;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87506464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.6517;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87506485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6117;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87506572 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0167;AVGPOST=0.9968;RSQ=0.9235;ERATE=0.0005;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87506575 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9996;AVGPOST=0.9992;RSQ=0.1258;ERATE=0.0004;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 87506589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7053;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0005;THETA=0.0006;AC=1540;AN=2184 GT:DS:GL:BD 0.70512819 1
1 87506614 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9354;ERATE=0.0003;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87506841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87506961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7037;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=1536;AN=2184 GT:DS:GL:BD 0.70329672 1
1 87506988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87506999 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87507056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0459;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 87507091 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87507137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6289;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87507151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8039;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87507251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7038;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0039;AC=1536;AN=2184 GT:DS:GL:BD 0.70329672 1
1 87507330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87507342 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7048;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 87507415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0832;AVGPOST=0.9972;RSQ=0.9869;ERATE=0.0005;THETA=0.0011;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 87507429 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0009;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87507449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.7129;AVGPOST=0.9943;RSQ=0.9897;ERATE=0.0008;THETA=0.0003;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 87507459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6437;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87507484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9990;RSQ=0.9752;ERATE=0.0003;THETA=0.0021;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87507558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6515;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87507593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.896;LDAF=0.6596;AVGPOST=0.9419;RSQ=0.9008;ERATE=0.0045;THETA=0.0013;AC=1467;AN=2184 GT:DS:GL:BD 0.67170328 1
1 87507612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.868;LDAF=0.6600;AVGPOST=0.9194;RSQ=0.8673;ERATE=0.0097;THETA=0.0029;AC=1474;AN=2184 GT:DS:GL:BD 0.67490840 1
1 87507647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.764;LDAF=0.0512;AVGPOST=0.9664;RSQ=0.7544;ERATE=0.0005;THETA=0.0007;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 87507665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.478;LDAF=0.0037;AVGPOST=0.9947;RSQ=0.3952;ERATE=0.0011;THETA=0.0045;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87507719 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.965;LDAF=0.6946;AVGPOST=0.9524;RSQ=0.9204;ERATE=0.0055;THETA=0.0021;AC=1537;AN=2184 GT:DS:GL:BD 0.70375460 1
1 87507775 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5537;ERATE=0.0004;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87507778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.510;LDAF=0.0059;AVGPOST=0.9931;RSQ=0.5298;ERATE=0.0010;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87507801 . C CA 374 PASS INDEL;BAVGPOST=0.970;BRSQ=0.523;LDAF=0.0512;AVGPOST=0.9392;RSQ=0.4974;ERATE=0.0133;THETA=0.0038;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87507838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0092;AVGPOST=0.9982;RSQ=0.9318;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87507958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.698;LDAF=0.0101;AVGPOST=0.9921;RSQ=0.6991;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87508135 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2369;AVGPOST=0.9912;RSQ=0.9837;ERATE=0.0010;THETA=0.0004;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 87508145 . T TCAA 472 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9950;RSQ=0.5636;ERATE=0.0018;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87508202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0834;AVGPOST=0.9992;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 87508286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6715;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87508324 . AC A 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.3955;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87508336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87508337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87508349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6518;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87508450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4762;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0006;THETA=0.0003;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 87508458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4567;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87508475 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7234;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87508486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87508537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0323;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 87508619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1837;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 87508694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9543;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87508767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2632;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 87508794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87508862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0088;AVGPOST=0.9988;RSQ=0.9367;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87508866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7971;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87508948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0035;AVGPOST=0.9957;RSQ=0.4588;ERATE=0.0019;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87509096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.856;LDAF=0.0245;AVGPOST=0.9931;RSQ=0.8844;ERATE=0.0006;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87509302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.882;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.8992;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87509382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6474;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87509471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8268;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87509496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1869;AVGPOST=0.9966;RSQ=0.9917;ERATE=0.0007;THETA=0.0004;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 87509545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87509560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1879;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 87509592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1834;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 87509603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4998;AVGPOST=0.9974;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 87509608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1808;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 87509737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87509756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1809;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 87509803 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87509818 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7620;ERATE=0.0013;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87509833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87509887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87509901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9111;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87509969 . C CG 1318 PASS INDEL;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0064;AVGPOST=0.9980;RSQ=0.8643;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87510115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87510140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4762;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0017;THETA=0.0011;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 87510243 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87510350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2122;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0037;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 87510405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7478;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87510560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0404;AVGPOST=0.9958;RSQ=0.9592;ERATE=0.0004;THETA=0.0028;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 87510563 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0796;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0003;THETA=0.0008;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 87510673 . TTTG T 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.5507;ERATE=0.0015;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87510789 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7197;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87510892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1902;AVGPOST=0.9967;RSQ=0.9913;ERATE=0.0004;THETA=0.0006;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 87510914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87510969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1915;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0004;THETA=0.0017;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 87511010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87511087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6668;ERATE=0.0010;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87511100 . T TTA 27 PASS INDEL;BAVGPOST=0.990;BRSQ=0.660;LDAF=0.0095;AVGPOST=0.9941;RSQ=0.7572;ERATE=0.0006;THETA=0.0015;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87511140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0192;AVGPOST=0.9957;RSQ=0.9114;ERATE=0.0007;THETA=0.0012;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87511208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.782;LDAF=0.0080;AVGPOST=0.9969;RSQ=0.8452;ERATE=0.0005;THETA=0.0017;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87511225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.5529;ERATE=0.0008;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87511272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8157;ERATE=0.0007;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87511306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.910;LDAF=0.0212;AVGPOST=0.9959;RSQ=0.9205;ERATE=0.0009;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87511349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.2121;AVGPOST=0.9858;RSQ=0.9673;ERATE=0.0007;THETA=0.0042;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 87511354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87511498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87511524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0225;AVGPOST=0.9996;RSQ=0.9914;ERATE=0.0003;THETA=0.0010;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87511666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7282;ERATE=0.0004;THETA=0.0138;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87511690 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.639;LDAF=0.0031;AVGPOST=0.9964;RSQ=0.5122;ERATE=0.0020;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87511868 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6638;ERATE=0.0009;THETA=0.0050;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87511886 rs71583793 T TGAG 10168 PASS INDEL;BAVGPOST=0.894;BRSQ=0.790;LDAF=0.3248;AVGPOST=0.8804;RSQ=0.8073;ERATE=0.0102;THETA=0.0033;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 87511895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6668;ERATE=0.0004;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87511906 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87511960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0177;AVGPOST=0.9972;RSQ=0.9453;ERATE=0.0005;THETA=0.0056;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87511985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87512059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0098;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87512086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.787;LDAF=0.0342;AVGPOST=0.9836;RSQ=0.8072;ERATE=0.0018;THETA=0.0110;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87512219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.846;LDAF=0.0139;AVGPOST=0.9952;RSQ=0.8572;ERATE=0.0007;THETA=0.0050;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87512238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.883;LDAF=0.1948;AVGPOST=0.9573;RSQ=0.8977;ERATE=0.0020;THETA=0.0059;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 87512239 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.895;LDAF=0.1859;AVGPOST=0.9668;RSQ=0.9179;ERATE=0.0008;THETA=0.0069;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 87512266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.764;LDAF=0.0222;AVGPOST=0.9880;RSQ=0.8128;ERATE=0.0014;THETA=0.0049;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87512309 . TG T 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5814;ERATE=0.0006;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87512352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9092;ERATE=0.0004;THETA=0.0049;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87512384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9185;ERATE=0.0004;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87512409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0054;AVGPOST=0.9982;RSQ=0.8547;ERATE=0.0023;THETA=0.0051;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87512428 . A AG 167 PASS INDEL;BAVGPOST=0.998;BRSQ=0.662;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5681;ERATE=0.0005;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87512451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8880;ERATE=0.0010;THETA=0.0143;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87512510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87512605 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9549;ERATE=0.0003;THETA=0.0053;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87512623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5654;ERATE=0.0003;THETA=0.0146;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87512660 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87512672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.755;LDAF=0.0087;AVGPOST=0.9962;RSQ=0.8186;ERATE=0.0009;THETA=0.0074;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87512782 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7436;ERATE=0.0005;THETA=0.0041;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87512785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.922;LDAF=0.0345;AVGPOST=0.9911;RSQ=0.8904;ERATE=0.0011;THETA=0.0096;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 87512809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.685;LDAF=0.0048;AVGPOST=0.9974;RSQ=0.7775;ERATE=0.0005;THETA=0.0095;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87513018 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.945;LDAF=0.1316;AVGPOST=0.9736;RSQ=0.9145;ERATE=0.0008;THETA=0.0033;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 87513046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5436;ERATE=0.0007;THETA=0.0078;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87513051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.719;LDAF=0.0044;AVGPOST=0.9969;RSQ=0.7190;ERATE=0.0004;THETA=0.0064;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87513086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5389;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87513217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3777;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87513248 rs5781910 AT A 1565 PASS INDEL;BAVGPOST=0.950;BRSQ=0.793;LDAF=0.1387;AVGPOST=0.9166;RSQ=0.7449;ERATE=0.0143;THETA=0.0018;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 87513287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1455;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0006;THETA=0.0005;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87513369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1455;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0005;THETA=0.0025;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87513393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8798;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87513449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1453;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87513553 . A ATTT 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87513660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0136;AVGPOST=0.9978;RSQ=0.9287;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87513703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7599;ERATE=0.0006;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87513705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.1872;AVGPOST=0.9982;RSQ=0.9952;ERATE=0.0004;THETA=0.0004;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 87513706 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.964;LDAF=0.1515;AVGPOST=0.9836;RSQ=0.9518;ERATE=0.0035;THETA=0.0004;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 87513720 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.981;LDAF=0.1449;AVGPOST=0.9987;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87513728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1452;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0003;THETA=0.0010;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87513775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4503;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0004;THETA=0.0013;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 87513811 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1453;AVGPOST=0.9993;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87513819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7450;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87513831 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7363;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87513867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6694;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87513965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.960;LDAF=0.1368;AVGPOST=0.9917;RSQ=0.9744;ERATE=0.0003;THETA=0.0005;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 87514034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.960;LDAF=0.1375;AVGPOST=0.9901;RSQ=0.9691;ERATE=0.0008;THETA=0.0012;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 87514035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6619;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87514087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1466;AVGPOST=0.9986;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 87514094 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1452;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87514274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0066;AVGPOST=0.9972;RSQ=0.8643;ERATE=0.0012;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87514303 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6854;ERATE=0.0011;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87514527 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5004;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87514664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1267;AVGPOST=0.9970;RSQ=0.9898;ERATE=0.0004;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 87514687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.615;LDAF=0.0098;AVGPOST=0.9871;RSQ=0.5370;ERATE=0.0006;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87514736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.942;LDAF=0.0681;AVGPOST=0.9952;RSQ=0.9736;ERATE=0.0004;THETA=0.0009;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 87514780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0248;AVGPOST=0.9973;RSQ=0.9615;ERATE=0.0003;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 87514843 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1453;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87514846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87514876 . A AC 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5856;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87515025 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1439;AVGPOST=0.9976;RSQ=0.9924;ERATE=0.0005;THETA=0.0006;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 87515070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1452;AVGPOST=0.9973;RSQ=0.9910;ERATE=0.0006;THETA=0.0005;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87515076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0870;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 87515083 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9986;RSQ=0.8691;ERATE=0.0004;THETA=0.0034;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87515112 rs60803150 CCACACTCA C 8134 PASS INDEL;BAVGPOST=0.957;BRSQ=0.807;LDAF=0.1346;AVGPOST=0.9846;RSQ=0.9499;ERATE=0.0006;THETA=0.0006;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 87515216 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1463;AVGPOST=0.9976;RSQ=0.9919;ERATE=0.0006;THETA=0.0004;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87515270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0121;AVGPOST=0.9980;RSQ=0.9317;ERATE=0.0004;THETA=0.0040;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87515352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4374;AVGPOST=0.9947;RSQ=0.9928;ERATE=0.0007;THETA=0.0003;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 87515399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0874;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 87515414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1471;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87515511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87515666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1472;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87515683 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9564;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87515778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6729;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87515792 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5672;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87515851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.1480;AVGPOST=0.9972;RSQ=0.9911;ERATE=0.0007;THETA=0.0002;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87515917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5928;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87515939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0408;AVGPOST=0.9986;RSQ=0.9844;ERATE=0.0004;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 87515955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7604;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87516060 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1469;AVGPOST=0.9981;RSQ=0.9947;ERATE=0.0004;THETA=0.0010;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 87516153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4378;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0004;THETA=0.0011;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 87516210 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87516229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0419;AVGPOST=0.9994;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 87516247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1471;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87516271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87516274 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87516296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0169;AVGPOST=0.9973;RSQ=0.9408;ERATE=0.0011;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87516298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87516342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7720;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87516458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87516497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1289;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 87516535 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2770;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 87516607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4774;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87516798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0215;AVGPOST=0.9993;RSQ=0.9866;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87516975 . A AT 127 PASS INDEL;BAVGPOST=0.980;BRSQ=0.532;LDAF=0.0380;AVGPOST=0.9514;RSQ=0.4801;ERATE=0.0109;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87517031 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87517098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87517150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87517173 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1485;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0004;THETA=0.0006;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 87517221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1473;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87517290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0371;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87517309 . TG T 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6302;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87517322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1473;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0004;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87517422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87517425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1402;AVGPOST=0.9934;RSQ=0.9815;ERATE=0.0004;THETA=0.0004;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 87517447 . ACT A 799 PASS INDEL;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0120;AVGPOST=0.9953;RSQ=0.8782;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87517454 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0119;AVGPOST=0.9954;RSQ=0.8761;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87517458 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1472;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0004;THETA=0.0009;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87517508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1472;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87517545 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87517550 . G GT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8386;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87517563 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9788;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87517579 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1474;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0004;THETA=0.0017;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87517649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.7951;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87517679 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87517731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.951;LDAF=0.0371;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0009;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87517746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5025;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87517755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1475;AVGPOST=0.9968;RSQ=0.9894;ERATE=0.0008;THETA=0.0003;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 87517797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87517806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.3660;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87518010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0374;AVGPOST=0.9993;RSQ=0.9928;ERATE=0.0004;THETA=0.0005;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87518012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4511;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87518043 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1475;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87518055 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87518103 . T TCC 28 PASS INDEL;BAVGPOST=0.998;BRSQ=0.639;LDAF=0.0045;AVGPOST=0.9947;RSQ=0.4860;ERATE=0.0011;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87518187 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1289;AVGPOST=0.9980;RSQ=0.9922;ERATE=0.0004;THETA=0.0005;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 87518199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0111;AVGPOST=0.9988;RSQ=0.9577;ERATE=0.0003;THETA=0.0034;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87518227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9607;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87518416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0512;AVGPOST=0.9976;RSQ=0.9829;ERATE=0.0005;THETA=0.0004;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 87518522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0051;AVGPOST=0.9978;RSQ=0.8175;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87518566 . T TTA 232 PASS INDEL;BAVGPOST=0.996;BRSQ=0.614;LDAF=0.0081;AVGPOST=0.9926;RSQ=0.6181;ERATE=0.0017;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87518577 . TTTAAGA T 691 PASS INDEL;BAVGPOST=0.997;BRSQ=0.698;LDAF=0.0087;AVGPOST=0.9899;RSQ=0.5331;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87518592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0188;AVGPOST=0.9964;RSQ=0.9246;ERATE=0.0006;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87518636 . C CAT 336 PASS INDEL;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0045;AVGPOST=0.9976;RSQ=0.7569;ERATE=0.0006;THETA=0.0049;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87518678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7663;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87518984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5826;ERATE=0.0008;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87519149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9768;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87519201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0585;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 87519233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87519255 . CTTG C 1414 PASS INDEL;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0177;AVGPOST=0.9978;RSQ=0.9542;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87519317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87519393 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4466;AVGPOST=0.9946;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 87519417 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87519496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87519600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87519823 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9649;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87519834 . TA T 225 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.5429;ERATE=0.0016;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87519857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87519907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87519929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9870;ERATE=0.0006;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87519975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7842;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87520011 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87520042 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8276;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87520105 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87520174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8806;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87520244 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7561;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87520314 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87520403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9048;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87520427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5118;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87520511 . TAAAG T 438 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9629;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87520585 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0510;AVGPOST=0.9979;RSQ=0.9856;ERATE=0.0004;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 87520653 . TACTA T 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0033;AVGPOST=0.9943;RSQ=0.3716;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87520709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87520768 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87520773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9562;ERATE=0.0006;THETA=0.0058;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87520916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9669;AVGPOST=0.9996;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=2112;AN=2184 GT:DS:GL:BD 0.96703297 1
1 87520999 . CTCTT C 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.4531;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87521261 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87521480 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7677;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87521580 . A AT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87521974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87522134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87522135 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9180;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87522239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9253;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87522257 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0239;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 87522268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9324;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87522287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7188;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87522438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6006;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87522555 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0593;AVGPOST=0.9925;RSQ=0.9461;ERATE=0.0006;THETA=0.0034;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 87522647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9019;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87522731 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3756;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87522748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7305;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87522787 . C CA 301 PASS INDEL;BAVGPOST=0.993;BRSQ=0.658;LDAF=0.0168;AVGPOST=0.9825;RSQ=0.5895;ERATE=0.0047;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87522816 . TA T 13284 PASS INDEL;BAVGPOST=0.977;BRSQ=0.963;LDAF=0.4026;AVGPOST=0.9758;RSQ=0.9668;ERATE=0.0039;THETA=0.0004;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 87522849 rs36095900 AT A 58032 PASS INDEL;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.4116;AVGPOST=0.9898;RSQ=0.9859;ERATE=0.0005;THETA=0.0032;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 87522850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0786;AVGPOST=0.9982;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 87522903 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87522930 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7020;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87522965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7523;ERATE=0.0004;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87523148 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1601;AVGPOST=0.9952;RSQ=0.9864;ERATE=0.0003;THETA=0.0006;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 87523207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0381;AVGPOST=0.9991;RSQ=0.9888;ERATE=0.0004;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 87523431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0706;AVGPOST=0.9961;RSQ=0.9779;ERATE=0.0005;THETA=0.0007;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87523513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0413;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 87523565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6203;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87523590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87523610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.948;LDAF=0.0972;AVGPOST=0.9877;RSQ=0.9483;ERATE=0.0008;THETA=0.0003;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87523612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0039;AVGPOST=0.9975;RSQ=0.7480;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87523682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87523685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7975;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87523734 . CTT C 8233 PASS INDEL;BAVGPOST=0.994;BRSQ=0.953;LDAF=0.0615;AVGPOST=0.9955;RSQ=0.9718;ERATE=0.0009;THETA=0.0007;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 87523780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0699;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0003;THETA=0.0011;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 87523857 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.942;LDAF=0.0187;AVGPOST=0.9965;RSQ=0.9328;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87523876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87523879 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0317;AVGPOST=0.9989;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 87523893 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0024;AVGPOST=0.9964;RSQ=0.3508;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87524012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.3070;AVGPOST=0.9884;RSQ=0.9821;ERATE=0.0005;THETA=0.0005;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 87524088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.680;LDAF=0.0065;AVGPOST=0.9944;RSQ=0.6748;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87524142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6867;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87524162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87524259 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9562;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87524290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5009;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87524310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0424;AVGPOST=0.9992;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 87524347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87524350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0175;AVGPOST=0.9992;RSQ=0.9811;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87524356 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0095;AVGPOST=0.9993;RSQ=0.9674;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87524456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87524487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9996;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87524574 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0152;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87524624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87524634 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87524655 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7212;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87524734 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9754;ERATE=0.0003;THETA=0.0015;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87524758 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0713;AVGPOST=0.9988;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 87524764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8406;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87524773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0074;AVGPOST=0.9992;RSQ=0.9536;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87524987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.9069;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87524990 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9998;RSQ=0.9942;ERATE=0.0003;THETA=0.0010;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87525131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6954;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87525144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9191;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87525176 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.786;LDAF=0.0093;AVGPOST=0.9943;RSQ=0.7605;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87525211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5588;AVGPOST=0.9945;RSQ=0.9919;ERATE=0.0005;THETA=0.0006;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 87525230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4890;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87525297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=0.9991;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 87525318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0616;AVGPOST=0.9983;RSQ=0.9880;ERATE=0.0004;THETA=0.0007;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 87525341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0074;AVGPOST=0.9981;RSQ=0.9026;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87525374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0617;AVGPOST=0.9988;RSQ=0.9913;ERATE=0.0004;THETA=0.0006;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 87525472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9387;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87525481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87525645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0615;AVGPOST=0.9991;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 87525830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0723;AVGPOST=0.9994;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 87525848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87525850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.878;LDAF=0.0126;AVGPOST=0.9950;RSQ=0.8342;ERATE=0.0004;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87525985 . CG C 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87525993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8105;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87525996 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87526116 . A AG 22371 PASS INDEL;BAVGPOST=0.978;BRSQ=0.968;LDAF=0.5587;AVGPOST=0.9885;RSQ=0.9839;ERATE=0.0006;THETA=0.0004;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 87526170 rs56992139 G GC 63894 PASS INDEL;BAVGPOST=0.978;BRSQ=0.968;LDAF=0.5598;AVGPOST=0.9911;RSQ=0.9872;ERATE=0.0005;THETA=0.0004;AC=1224;AN=2184 GT:DS:GL:BD 0.56043959 1
1 87526172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8708;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87526223 . TCTGTA T 795 PASS INDEL;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0124;AVGPOST=0.9979;RSQ=0.9268;ERATE=0.0006;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87526236 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7400;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87526278 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0367;AVGPOST=0.9980;RSQ=0.9755;ERATE=0.0004;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87526361 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.4532;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87526364 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5842;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87526424 . AC A 40 PASS INDEL;BAVGPOST=0.993;BRSQ=0.546;LDAF=0.0093;AVGPOST=0.9948;RSQ=0.7896;ERATE=0.0006;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87526435 . CA C 5506 PASS INDEL;BAVGPOST=0.989;BRSQ=0.955;LDAF=0.0861;AVGPOST=0.9858;RSQ=0.9406;ERATE=0.0024;THETA=0.0002;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 87526436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.781;LDAF=0.0094;AVGPOST=0.9972;RSQ=0.8764;ERATE=0.0007;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87526476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6855;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87526477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9210;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87526493 . T TA 145 PASS INDEL;BAVGPOST=0.990;BRSQ=0.487;LDAF=0.0179;AVGPOST=0.9775;RSQ=0.4884;ERATE=0.0050;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87526589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0395;AVGPOST=0.9996;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 87526638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0192;AVGPOST=0.9987;RSQ=0.9741;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87526677 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5432;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87526919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0044;AVGPOST=0.9963;RSQ=0.6765;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87527026 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0047;AVGPOST=0.9969;RSQ=0.7520;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87527056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6131;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87527071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6821;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87527078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.830;LDAF=0.0055;AVGPOST=0.9976;RSQ=0.8371;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87527090 . T TA 3226 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0442;AVGPOST=0.9964;RSQ=0.9694;ERATE=0.0005;THETA=0.0015;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 87527091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0621;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 87527129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9559;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87527137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0911;AVGPOST=0.9985;RSQ=0.9934;ERATE=0.0005;THETA=0.0002;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 87527150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4255;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87527189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87527190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87527209 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7355;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87527210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0355;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87527275 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8351;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87527585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0417;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 87527756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0358;AVGPOST=0.9995;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87527783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0638;AVGPOST=0.9987;RSQ=0.9926;ERATE=0.0004;THETA=0.0007;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 87527829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0911;AVGPOST=0.9982;RSQ=0.9922;ERATE=0.0004;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 87527874 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87527884 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0313;AVGPOST=0.9982;RSQ=0.9786;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87527932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6758;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87528000 . C CAATAA 584 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5634;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87528011 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0294;AVGPOST=0.9995;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87528015 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3684;AVGPOST=0.9931;RSQ=0.9879;ERATE=0.0009;THETA=0.0004;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 87528274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6709;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87528281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0617;AVGPOST=0.9981;RSQ=0.9872;ERATE=0.0004;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 87528287 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7447;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87528309 . AT A 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.5853;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87528320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0312;AVGPOST=0.9982;RSQ=0.9775;ERATE=0.0003;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 87528404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9271;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87528727 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0321;AVGPOST=0.9994;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 87528812 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87528815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0299;AVGPOST=0.9990;RSQ=0.9870;ERATE=0.0005;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87528858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87529000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0091;AVGPOST=0.9964;RSQ=0.8631;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87529021 rs72432587 TGGGAAAAATAAGTCA T 5549 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0310;AVGPOST=0.9980;RSQ=0.9751;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87529134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0321;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 87529200 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.640;LDAF=0.0047;AVGPOST=0.9968;RSQ=0.6818;ERATE=0.0014;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87529216 . TAC T 10 PASS INDEL;BAVGPOST=0.979;BRSQ=0.174;LDAF=0.0931;AVGPOST=0.8771;RSQ=0.4436;ERATE=0.0084;THETA=0.0002;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 87529315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4556;AVGPOST=0.9943;RSQ=0.9917;ERATE=0.0011;THETA=0.0003;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 87529472 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.6865;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87529582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87529614 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4555;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 87529651 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6847;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87529801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0300;AVGPOST=0.9995;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87529984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3040;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 87530003 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.967;LDAF=0.1788;AVGPOST=0.9777;RSQ=0.9486;ERATE=0.0015;THETA=0.0004;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 87530051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6079;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87530068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7219;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87530078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.653;LDAF=0.0114;AVGPOST=0.9855;RSQ=0.5031;ERATE=0.0020;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87530114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0058;AVGPOST=0.9972;RSQ=0.8049;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87530139 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0303;AVGPOST=0.9990;RSQ=0.9890;ERATE=0.0004;THETA=0.0002;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87530152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0297;AVGPOST=0.9994;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87530208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8284;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87530233 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0291;AVGPOST=0.9987;RSQ=0.9824;ERATE=0.0005;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 87530292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0227;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0004;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87530328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5959;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87530375 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.6642;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87530443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0308;AVGPOST=0.9994;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87530496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87530547 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0650;AVGPOST=0.9969;RSQ=0.9794;ERATE=0.0003;THETA=0.0002;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 87530555 . ACTGTC A 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87531024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87531131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0137;AVGPOST=0.9960;RSQ=0.8803;ERATE=0.0008;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87531146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0422;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 87531234 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4467;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87531242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3590;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87531273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.796;LDAF=0.0072;AVGPOST=0.9986;RSQ=0.9162;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87531368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87531488 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9560;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 87531576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5901;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87531676 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87531693 . ATT A 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87531741 . TTTTG T 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87531742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87531763 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87531858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5246;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87531944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87532029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0300;AVGPOST=0.9994;RSQ=0.9912;ERATE=0.0005;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87532034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9788;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0004;THETA=0.0005;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 87532213 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.910;LDAF=0.0228;AVGPOST=0.9984;RSQ=0.9749;ERATE=0.0004;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87532214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.9170;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87532259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0410;AVGPOST=0.9993;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 87532321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0070;AVGPOST=0.9989;RSQ=0.9234;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87532414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5892;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87532415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7585;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87532419 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9668;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87532464 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87532535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0878;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 87532680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8282;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87532767 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.9727;AVGPOST=0.9938;RSQ=0.9148;ERATE=0.0009;THETA=0.0004;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 87532862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87533041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0139;AVGPOST=0.9985;RSQ=0.9575;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87533046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8543;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87533233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6554;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87533278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5064;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87533386 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8696;AVGPOST=0.9988;RSQ=0.9966;ERATE=0.0005;THETA=0.0004;AC=1899;AN=2184 GT:DS:GL:BD 0.86950547 1
1 87533477 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.7007;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87533521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1331;AVGPOST=0.9950;RSQ=0.9827;ERATE=0.0004;THETA=0.0004;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 87533606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5543;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87533611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7305;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87533801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3730;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87533834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6284;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=1372;AN=2184 GT:DS:GL:BD 0.62820512 1
1 87533955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87534108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87534146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0904;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 87534171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0906;AVGPOST=0.9996;RSQ=0.9982;ERATE=0.0003;THETA=0.0007;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 87534207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87534239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9037;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87534251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0152;AVGPOST=0.9979;RSQ=0.9550;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87534342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87534530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87534607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87534663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5780;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87534762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0153;AVGPOST=0.9965;RSQ=0.9174;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87534816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.903;LDAF=0.0340;AVGPOST=0.9937;RSQ=0.9272;ERATE=0.0006;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 87534921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0107;AVGPOST=0.9989;RSQ=0.9490;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87534983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4538;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87535085 . TTAAGAA T 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0041;AVGPOST=0.9968;RSQ=0.6689;ERATE=0.0008;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87535331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5548;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87535384 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4851;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87535446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5315;AVGPOST=0.9972;RSQ=0.9951;ERATE=0.0006;THETA=0.0007;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 87535474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.842;LDAF=0.0174;AVGPOST=0.9888;RSQ=0.7475;ERATE=0.0035;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87535475 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87535507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87535568 . TAAAA T 48 PASS INDEL;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4427;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87535762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.945;LDAF=0.1075;AVGPOST=0.9767;RSQ=0.9052;ERATE=0.0009;THETA=0.0006;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 87535829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4705;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87535837 rs71172659 A AAAATACT 15028 PASS INDEL;BAVGPOST=0.992;BRSQ=0.951;LDAF=0.0807;AVGPOST=0.9933;RSQ=0.9688;ERATE=0.0003;THETA=0.0024;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 87535868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0124;AVGPOST=0.9988;RSQ=0.9570;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87535879 rs71172660 TAAGGAGGTTTTCATGA T 22264 PASS INDEL;BAVGPOST=0.994;BRSQ=0.965;LDAF=0.0811;AVGPOST=0.9919;RSQ=0.9627;ERATE=0.0003;THETA=0.0067;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 87535921 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8594;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87535940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87536120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87536149 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87536254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87536256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5316;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0005;THETA=0.0057;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 87536302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.577;LDAF=0.9697;AVGPOST=0.9672;RSQ=0.6065;ERATE=0.0034;THETA=0.0007;AC=2144;AN=2184 GT:DS:GL:BD 0.98168498 1
1 87536560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.712;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.6037;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87536642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7915;ERATE=0.0004;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87536689 . AAAATT A 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4883;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87536752 . AAG A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6425;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87536773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3516;AVGPOST=0.9957;RSQ=0.9928;ERATE=0.0005;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 87536873 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5659;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87536890 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87536894 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4975;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87536986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9291;ERATE=0.0003;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87537016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9624;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87537105 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0248;AVGPOST=0.9996;RSQ=0.9930;ERATE=0.0003;THETA=0.0025;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 87537153 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87537442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7153;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87537499 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7901;ERATE=0.0003;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87537509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0104;AVGPOST=0.9984;RSQ=0.9512;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87537610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87537669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87537745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6235;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87537750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3542;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0003;THETA=0.0011;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 87537855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87537922 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87537955 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9763;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87538163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.859;LDAF=0.0087;AVGPOST=0.9969;RSQ=0.8615;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87538248 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87538332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87538385 . TCTTCTGTCC T 872 PASS INDEL;BAVGPOST=0.997;BRSQ=0.807;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.9060;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87538405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0302;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87538522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0057;AVGPOST=0.9981;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87538587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.953;LDAF=0.5838;AVGPOST=0.9562;RSQ=0.9394;ERATE=0.0049;THETA=0.0003;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 87538597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4243;ERATE=0.0005;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87538615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0348;AVGPOST=0.9976;RSQ=0.9724;ERATE=0.0005;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 87538655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6001;AVGPOST=0.9957;RSQ=0.9933;ERATE=0.0007;THETA=0.0005;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 87538724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4915;ERATE=0.0009;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87538741 . G GA 377 PASS INDEL;BAVGPOST=0.990;BRSQ=0.698;LDAF=0.0222;AVGPOST=0.9745;RSQ=0.5591;ERATE=0.0024;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87538772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.4882;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87538799 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1105;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 87538826 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87538828 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4525;AVGPOST=0.9969;RSQ=0.9958;ERATE=0.0006;THETA=0.0004;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 87538879 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0049;AVGPOST=0.9953;RSQ=0.6091;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87538912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0111;AVGPOST=0.9917;RSQ=0.7141;ERATE=0.0007;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87538919 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.789;LDAF=0.0215;AVGPOST=0.9892;RSQ=0.7885;ERATE=0.0006;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87539061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5995;AVGPOST=0.9918;RSQ=0.9878;ERATE=0.0012;THETA=0.0003;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 87539062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1109;AVGPOST=0.9979;RSQ=0.9911;ERATE=0.0007;THETA=0.0013;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 87539066 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87539068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4997;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87539077 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6492;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87539159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.5996;AVGPOST=0.9949;RSQ=0.9929;ERATE=0.0005;THETA=0.0010;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 87539242 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87539379 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2921;AVGPOST=0.9974;RSQ=0.9951;ERATE=0.0003;THETA=0.0008;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 87539397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6735;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87539498 . T TTC 1976 PASS INDEL;BAVGPOST=0.916;BRSQ=0.772;LDAF=0.1939;AVGPOST=0.9288;RSQ=0.8459;ERATE=0.0005;THETA=0.0009;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 87539627 . T TC 4772 PASS INDEL;BAVGPOST=0.917;BRSQ=0.774;LDAF=0.1953;AVGPOST=0.9268;RSQ=0.8408;ERATE=0.0010;THETA=0.0007;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 87539628 . T TTA 6005 PASS INDEL;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1498;AVGPOST=0.9879;RSQ=0.9654;ERATE=0.0009;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87539631 . T TA 12238 PASS INDEL;BAVGPOST=0.984;BRSQ=0.948;LDAF=0.1635;AVGPOST=0.9681;RSQ=0.9126;ERATE=0.0047;THETA=0.0005;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 87539632 rs79234159 T TTA 22519 PASS INDEL;BAVGPOST=0.987;BRSQ=0.963;LDAF=0.1629;AVGPOST=0.9930;RSQ=0.9799;ERATE=0.0006;THETA=0.0006;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 87539634 rs71673766 T TA 7008 PASS INDEL;BAVGPOST=0.985;BRSQ=0.960;LDAF=0.1649;AVGPOST=0.9887;RSQ=0.9699;ERATE=0.0009;THETA=0.0062;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 87539635 . T TA 269 PASS INDEL;BAVGPOST=0.997;BRSQ=0.840;LDAF=0.0130;AVGPOST=0.9927;RSQ=0.7590;ERATE=0.0005;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87539637 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0936;AVGPOST=0.9965;RSQ=0.9851;ERATE=0.0005;THETA=0.0005;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 87539830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.562;LDAF=0.0058;AVGPOST=0.9925;RSQ=0.5043;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87539867 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.564;LDAF=0.0055;AVGPOST=0.9928;RSQ=0.4658;ERATE=0.0010;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87539874 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.943;LDAF=0.0768;AVGPOST=0.9905;RSQ=0.9505;ERATE=0.0005;THETA=0.0007;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 87539953 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.944;LDAF=0.2861;AVGPOST=0.9836;RSQ=0.9687;ERATE=0.0015;THETA=0.0006;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 87539963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4448;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87539978 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6497;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87539984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.995;LDAF=0.6005;AVGPOST=0.9910;RSQ=0.9863;ERATE=0.0013;THETA=0.0003;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 87539997 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7368;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87540152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5938;AVGPOST=0.9934;RSQ=0.9912;ERATE=0.0010;THETA=0.0005;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 87540154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87540235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.970;LDAF=0.5949;AVGPOST=0.9899;RSQ=0.9847;ERATE=0.0016;THETA=0.0004;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 87540268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7038;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87540361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4537;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0003;THETA=0.0036;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 87540417 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87540486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87540521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7648;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87540536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87540554 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6728;ERATE=0.0009;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87540711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.963;LDAF=0.4515;AVGPOST=0.9854;RSQ=0.9811;ERATE=0.0005;THETA=0.0023;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 87540724 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.979;LDAF=0.4633;AVGPOST=0.9940;RSQ=0.9913;ERATE=0.0007;THETA=0.0004;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 87540743 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87540755 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5130;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87540798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0336;AVGPOST=0.9973;RSQ=0.9671;ERATE=0.0004;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 87540847 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.940;LDAF=0.2936;AVGPOST=0.9726;RSQ=0.9518;ERATE=0.0023;THETA=0.0011;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 87540854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4359;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87540862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.920;LDAF=0.0774;AVGPOST=0.9870;RSQ=0.9371;ERATE=0.0006;THETA=0.0056;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 87540863 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87540868 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87540996 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0800;AVGPOST=0.9969;RSQ=0.9866;ERATE=0.0003;THETA=0.0009;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 87540999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.4607;AVGPOST=0.9929;RSQ=0.9908;ERATE=0.0004;THETA=0.0004;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 87541017 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.965;LDAF=0.4193;AVGPOST=0.9781;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=913;AN=2184 GT:DS:GL:BD 0.41804031 0
1 87541047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.964;LDAF=0.4218;AVGPOST=0.9749;RSQ=0.9684;ERATE=0.0008;THETA=0.0129;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 87541048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1634;AVGPOST=0.9952;RSQ=0.9861;ERATE=0.0009;THETA=0.0029;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 87541245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.922;LDAF=0.4247;AVGPOST=0.9429;RSQ=0.9214;ERATE=0.0074;THETA=0.0017;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 87541338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.978;LDAF=0.4356;AVGPOST=0.9770;RSQ=0.9701;ERATE=0.0008;THETA=0.0027;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 87541396 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.949;LDAF=0.2925;AVGPOST=0.9873;RSQ=0.9769;ERATE=0.0007;THETA=0.0012;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 87541415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0039;AVGPOST=0.9975;RSQ=0.7316;ERATE=0.0004;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87541433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0028;AVGPOST=0.9954;RSQ=0.3514;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87541470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.977;LDAF=0.4367;AVGPOST=0.9554;RSQ=0.9432;ERATE=0.0044;THETA=0.0010;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 87541605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0917;AVGPOST=0.9948;RSQ=0.9763;ERATE=0.0006;THETA=0.0005;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 87541621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0058;AVGPOST=0.9964;RSQ=0.7491;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87541722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6615;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87541786 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.939;LDAF=0.0819;AVGPOST=0.9931;RSQ=0.9657;ERATE=0.0006;THETA=0.0031;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 87541791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4638;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0006;THETA=0.0025;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 87541816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0111;AVGPOST=0.9989;RSQ=0.9619;ERATE=0.0004;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87541832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0044;AVGPOST=0.9971;RSQ=0.7373;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87541866 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4638;AVGPOST=0.9961;RSQ=0.9945;ERATE=0.0006;THETA=0.0018;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 87541946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5038;ERATE=0.0006;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87541972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0333;AVGPOST=0.9964;RSQ=0.9600;ERATE=0.0004;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 87541973 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.5660;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87542018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.8142;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87542116 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4620;AVGPOST=0.9965;RSQ=0.9956;ERATE=0.0003;THETA=0.0011;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 87542237 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87542341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4614;AVGPOST=0.9958;RSQ=0.9947;ERATE=0.0003;THETA=0.0013;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 87542347 . ATTT A 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4318;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87542353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.882;LDAF=0.4056;AVGPOST=0.9254;RSQ=0.9051;ERATE=0.0043;THETA=0.0053;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 87542407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.881;LDAF=0.3922;AVGPOST=0.9096;RSQ=0.8862;ERATE=0.0054;THETA=0.0045;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 87542427 . G GC 2326 PASS INDEL;BAVGPOST=0.919;BRSQ=0.874;LDAF=0.3518;AVGPOST=0.9116;RSQ=0.8864;ERATE=0.0013;THETA=0.0006;AC=778;AN=2184 GT:DS:GL:BD 0.35622710 0
1 87542486 rs34185133 C CA 21144 PASS INDEL;BAVGPOST=0.929;BRSQ=0.892;LDAF=0.3705;AVGPOST=0.9254;RSQ=0.9103;ERATE=0.0007;THETA=0.0010;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 87542492 . A AC 2158 PASS INDEL;BAVGPOST=0.920;BRSQ=0.876;LDAF=0.3614;AVGPOST=0.9224;RSQ=0.9028;ERATE=0.0007;THETA=0.0123;AC=801;AN=2184 GT:DS:GL:BD 0.36675823 0
1 87542494 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.897;LDAF=0.3554;AVGPOST=0.9321;RSQ=0.9153;ERATE=0.0006;THETA=0.0002;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 87542512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.889;BRSQ=0.837;LDAF=0.3142;AVGPOST=0.9134;RSQ=0.8786;ERATE=0.0007;THETA=0.0015;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 87542514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.897;LDAF=0.3575;AVGPOST=0.9242;RSQ=0.9053;ERATE=0.0016;THETA=0.0031;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 87542516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.929;LDAF=0.4492;AVGPOST=0.9563;RSQ=0.9416;ERATE=0.0061;THETA=0.0045;AC=980;AN=2184 GT:DS:GL:BD 0.44871795 0
1 87542558 . GT G 423 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7488;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87542704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1716;AVGPOST=0.9936;RSQ=0.9830;ERATE=0.0007;THETA=0.0010;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 87542934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0367;AVGPOST=0.9979;RSQ=0.9769;ERATE=0.0004;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 87542983 . CA C 66 PASS INDEL;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6741;ERATE=0.0005;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87542996 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87543042 . C CT 786 PASS INDEL;BAVGPOST=0.916;BRSQ=0.406;LDAF=0.1037;AVGPOST=0.8796;RSQ=0.4858;ERATE=0.0142;THETA=0.0062;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 87543092 rs67659995 TC T 20884 PASS INDEL;BAVGPOST=0.890;BRSQ=0.820;LDAF=0.3940;AVGPOST=0.8654;RSQ=0.7897;ERATE=0.0316;THETA=0.0004;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 87543097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.825;LDAF=0.2008;AVGPOST=0.9191;RSQ=0.8045;ERATE=0.0148;THETA=0.0002;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 87543098 . G GCGGC 856 PASS INDEL;BAVGPOST=0.998;BRSQ=0.736;LDAF=0.0067;AVGPOST=0.9914;RSQ=0.5279;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87543128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4144;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87543129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.712;LDAF=0.0046;AVGPOST=0.9950;RSQ=0.5726;ERATE=0.0010;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87543162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7438;ERATE=0.0005;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87543204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8709;AVGPOST=0.9988;RSQ=0.9959;ERATE=0.0004;THETA=0.0008;AC=1902;AN=2184 GT:DS:GL:BD 0.87087911 1
1 87543321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4637;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 87543335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5763;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87543362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5448;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87543441 . A AT 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0032;AVGPOST=0.9945;RSQ=0.3358;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87543570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6983;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87543691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5270;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87544086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.499;LDAF=0.0209;AVGPOST=0.9718;RSQ=0.4386;ERATE=0.0054;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87544089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.797;LDAF=0.0104;AVGPOST=0.9933;RSQ=0.7275;ERATE=0.0005;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87544127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.735;LDAF=0.1242;AVGPOST=0.9302;RSQ=0.7541;ERATE=0.0198;THETA=0.0012;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 87544192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9870;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87544197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5817;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87544200 . TG T 291 PASS INDEL;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0166;AVGPOST=0.9848;RSQ=0.6036;ERATE=0.0018;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87544435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7892;ERATE=0.0003;THETA=0.0035;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87544493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0235;AVGPOST=0.9988;RSQ=0.9767;ERATE=0.0004;THETA=0.0015;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 87545167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.365;LDAF=0.0045;AVGPOST=0.9936;RSQ=0.4450;ERATE=0.0009;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87545243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.929;LDAF=0.2526;AVGPOST=0.9815;RSQ=0.9649;ERATE=0.0010;THETA=0.0002;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 87545434 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6850;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87545444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0241;AVGPOST=0.9993;RSQ=0.9882;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 87545464 . ATAAC A 90 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87545474 . A AAT 68 PASS INDEL;BAVGPOST=0.996;BRSQ=0.642;LDAF=0.0139;AVGPOST=0.9856;RSQ=0.5930;ERATE=0.0018;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87545558 . C CT 1022 PASS INDEL;BAVGPOST=0.713;BRSQ=0.379;LDAF=0.2536;AVGPOST=0.8220;RSQ=0.6974;ERATE=0.0115;THETA=0.0010;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 87545644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.9307;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87545822 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0478;AVGPOST=0.9979;RSQ=0.9822;ERATE=0.0004;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 87545863 . ACAGCAGTT A 546 PASS INDEL;BAVGPOST=0.990;BRSQ=0.347;LDAF=0.0123;AVGPOST=0.9876;RSQ=0.5971;ERATE=0.0008;THETA=0.0028;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87546063 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6226;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87546294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.725;LDAF=0.0408;AVGPOST=0.9900;RSQ=0.9157;ERATE=0.0007;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 87546296 rs59017746 C CA 19965 PASS INDEL;BAVGPOST=0.876;BRSQ=0.818;LDAF=0.4615;AVGPOST=0.8918;RSQ=0.8653;ERATE=0.0113;THETA=0.0009;AC=1019;AN=2184 GT:DS:GL:BD 0.46657509 0
1 87546311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.679;LDAF=0.0259;AVGPOST=0.9888;RSQ=0.8533;ERATE=0.0004;THETA=0.0012;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87546435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.553;LDAF=0.0207;AVGPOST=0.9893;RSQ=0.8193;ERATE=0.0004;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87546459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5012;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87546597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.537;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.5730;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87546882 . T TTC 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.502;LDAF=0.0032;AVGPOST=0.9959;RSQ=0.4500;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87546889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8804;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87547248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0796;AVGPOST=0.9961;RSQ=0.9814;ERATE=0.0003;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 87547281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9496;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87547466 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.892;LDAF=0.0750;AVGPOST=0.9866;RSQ=0.9333;ERATE=0.0005;THETA=0.0004;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 87547872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.805;LDAF=0.0197;AVGPOST=0.9913;RSQ=0.8347;ERATE=0.0004;THETA=0.0013;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87548041 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.779;LDAF=0.1803;AVGPOST=0.9587;RSQ=0.9004;ERATE=0.0011;THETA=0.0005;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 87548149 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.0482;AVGPOST=0.9989;RSQ=0.9913;ERATE=0.0003;THETA=0.0008;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 87548268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0238;AVGPOST=0.9994;RSQ=0.9890;ERATE=0.0003;THETA=0.0024;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 87548443 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4045;ERATE=0.0008;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87548571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.995;LDAF=0.3004;AVGPOST=0.9919;RSQ=0.9849;ERATE=0.0009;THETA=0.0007;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 87548585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87548736 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87548862 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7475;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87548892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0224;AVGPOST=0.9996;RSQ=0.9926;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87548980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0281;AVGPOST=0.9993;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87549021 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87549108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0489;AVGPOST=0.9991;RSQ=0.9930;ERATE=0.0004;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 87549143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87549359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7246;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87549371 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87549440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.5527;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87549467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0126;AVGPOST=0.9991;RSQ=0.9697;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87549484 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.746;LDAF=0.0057;AVGPOST=0.9975;RSQ=0.8188;ERATE=0.0003;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87549492 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87549571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2749;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0006;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 87549622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87549694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7601;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87549807 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.9769;AVGPOST=0.9996;RSQ=0.9911;ERATE=0.0004;THETA=0.0002;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 87549870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.7954;ERATE=0.0007;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87549873 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8142;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87549895 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9768;AVGPOST=0.9992;RSQ=0.9841;ERATE=0.0004;THETA=0.0015;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 87549932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.9771;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 87549950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6512;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87550020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6448;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87550022 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9789;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87550184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87550251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7868;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87550270 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8316;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87550313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0915;AVGPOST=0.9954;RSQ=0.9793;ERATE=0.0004;THETA=0.0004;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 87550332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87550615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87550621 . GTTTA G 211 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6628;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87550641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6231;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0011;THETA=0.0005;AC=1359;AN=2184 GT:DS:GL:BD 0.62225276 1
1 87550648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0146;AVGPOST=0.9968;RSQ=0.9050;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87550710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0004;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87550711 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4863;AVGPOST=0.9930;RSQ=0.9894;ERATE=0.0006;THETA=0.0004;AC=1062;AN=2184 GT:DS:GL:BD 0.48626372 0
1 87550718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87550743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6590;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87550994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.844;LDAF=0.0147;AVGPOST=0.9963;RSQ=0.8974;ERATE=0.0004;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87551072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0089;AVGPOST=0.9986;RSQ=0.9386;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87551235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5892;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87551236 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9494;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87551285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.956;LDAF=0.2466;AVGPOST=0.9907;RSQ=0.9814;ERATE=0.0006;THETA=0.0004;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 87551565 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.975;LDAF=0.2191;AVGPOST=0.9844;RSQ=0.9672;ERATE=0.0031;THETA=0.0007;AC=470;AN=2184 GT:DS:GL:BD 0.21520147 0
1 87551655 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9675;AVGPOST=0.9993;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=2113;AN=2184 GT:DS:GL:BD 0.96749085 1
1 87551734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0229;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87551811 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0228;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87551817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8632;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87551882 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9316;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87551886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87551964 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6398;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87552059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87552218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2659;AVGPOST=0.9973;RSQ=0.9942;ERATE=0.0006;THETA=0.0004;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 87552440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87552516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87552565 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6052;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0010;AC=1320;AN=2184 GT:DS:GL:BD 0.60439563 1
1 87552646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87552691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6046;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0005;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 87552695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9766;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0004;THETA=0.0007;AC=2133;AN=2184 GT:DS:GL:BD 0.97664833 1
1 87552745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0273;AVGPOST=0.9979;RSQ=0.9656;ERATE=0.0004;THETA=0.0009;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87552788 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5959;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87552839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7281;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87552884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87553012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2675;AVGPOST=0.9956;RSQ=0.9903;ERATE=0.0008;THETA=0.0008;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 87553061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7542;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87553138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87553210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87553214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6686;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87553372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4905;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87553410 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.9740;AVGPOST=0.9991;RSQ=0.9865;ERATE=0.0004;THETA=0.0013;AC=2127;AN=2184 GT:DS:GL:BD 0.97390109 1
1 87553428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5052;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87553479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87553600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87553616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87553618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0924;AVGPOST=0.9953;RSQ=0.9798;ERATE=0.0004;THETA=0.0006;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 87553623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.6054;AVGPOST=0.9901;RSQ=0.9831;ERATE=0.0017;THETA=0.0005;AC=1323;AN=2184 GT:DS:GL:BD 0.60576922 1
1 87553844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87554103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.5778;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87554246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8350;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87554428 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0127;AVGPOST=0.9994;RSQ=0.9776;ERATE=0.0003;THETA=0.0016;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87554449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.9879;AVGPOST=0.9964;RSQ=0.8629;ERATE=0.0009;THETA=0.0003;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 87554459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7926;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87554668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0040;AVGPOST=0.9959;RSQ=0.5667;ERATE=0.0017;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87554719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.832;LDAF=0.0111;AVGPOST=0.9908;RSQ=0.6686;ERATE=0.0008;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87554727 . CT C 213 PASS INDEL;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0100;AVGPOST=0.9939;RSQ=0.7563;ERATE=0.0011;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87554729 . A AC 81 PASS INDEL;BAVGPOST=0.997;BRSQ=0.492;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4144;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87554745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87554885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5711;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87555027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0096;AVGPOST=0.9970;RSQ=0.8632;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87555053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0086;AVGPOST=0.9987;RSQ=0.9383;ERATE=0.0006;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87555225 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87555275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87555289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6229;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87555321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.1640;AVGPOST=0.9909;RSQ=0.9765;ERATE=0.0007;THETA=0.0017;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 87555339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8764;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87555368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0053;AVGPOST=0.9987;RSQ=0.9081;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87555580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0074;AVGPOST=0.9986;RSQ=0.9105;ERATE=0.0004;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87555601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87555712 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87555726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8856;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87555735 . CGAGT C 98 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87555869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87555870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87555915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7801;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87555954 . A AG 1035 PASS INDEL;BAVGPOST=0.897;BRSQ=0.726;LDAF=0.1968;AVGPOST=0.8894;RSQ=0.7708;ERATE=0.0044;THETA=0.0004;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 87555978 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0207;AVGPOST=0.9994;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87555985 . A AC 518 PASS INDEL;BAVGPOST=0.900;BRSQ=0.717;LDAF=0.1803;AVGPOST=0.8998;RSQ=0.7796;ERATE=0.0012;THETA=0.0004;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 87555987 . AAC A 210 PASS INDEL;BAVGPOST=0.988;BRSQ=0.661;LDAF=0.0273;AVGPOST=0.9707;RSQ=0.5496;ERATE=0.0123;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87556003 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5977;AVGPOST=0.9957;RSQ=0.9930;ERATE=0.0005;THETA=0.0003;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 87556018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0210;AVGPOST=0.9986;RSQ=0.9790;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87556093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6070;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87556094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9716;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87556106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5949;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87556115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0180;AVGPOST=0.9989;RSQ=0.9774;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87556125 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8259;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87556129 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87556175 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8233;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87556209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7980;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87556213 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87556316 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4339;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87556739 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9891;AVGPOST=0.9990;RSQ=0.9651;ERATE=0.0003;THETA=0.0005;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 87556808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87556919 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7694;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87556961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6357;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87556964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7178;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87557037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3646;AVGPOST=0.9893;RSQ=0.9822;ERATE=0.0013;THETA=0.0005;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 87557079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3639;AVGPOST=0.9950;RSQ=0.9909;ERATE=0.0006;THETA=0.0013;AC=793;AN=2184 GT:DS:GL:BD 0.36309522 0
1 87557128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3712;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87557263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3828;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0003;THETA=0.0011;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 87557315 . T TG 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7660;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87557444 . A AC 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7718;ERATE=0.0003;THETA=0.0060;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87557447 . C CTGAT 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87557534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3733;AVGPOST=0.9915;RSQ=0.9868;ERATE=0.0021;THETA=0.0075;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 87557547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4532;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87557591 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87557763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.947;LDAF=0.0624;AVGPOST=0.9931;RSQ=0.9556;ERATE=0.0005;THETA=0.0013;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 87557834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.978;LDAF=0.3947;AVGPOST=0.9819;RSQ=0.9709;ERATE=0.0019;THETA=0.0005;AC=856;AN=2184 GT:DS:GL:BD 0.39194140 0
1 87557883 . AC A 147 PASS INDEL;BAVGPOST=0.987;BRSQ=0.499;LDAF=0.0093;AVGPOST=0.9893;RSQ=0.5156;ERATE=0.0008;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87557921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3736;AVGPOST=0.9899;RSQ=0.9846;ERATE=0.0007;THETA=0.0003;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 87558083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.758;LDAF=0.0120;AVGPOST=0.9927;RSQ=0.7417;ERATE=0.0006;THETA=0.0023;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87558513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0253;AVGPOST=0.9885;RSQ=0.8208;ERATE=0.0011;THETA=0.0066;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87558646 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0110;AVGPOST=0.9971;RSQ=0.8887;ERATE=0.0006;THETA=0.0017;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87558650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.945;LDAF=0.3907;AVGPOST=0.9368;RSQ=0.8970;ERATE=0.0044;THETA=0.0013;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 87558763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.424;LDAF=0.0094;AVGPOST=0.9883;RSQ=0.4861;ERATE=0.0006;THETA=0.0064;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87558790 . GA G 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4613;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87558952 . AC A 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3598;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87558978 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4710;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0009;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 87559002 . AGAT A 11425 PASS INDEL;BAVGPOST=0.926;BRSQ=0.864;LDAF=0.3941;AVGPOST=0.8926;RSQ=0.8392;ERATE=0.0218;THETA=0.0003;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 87559039 rs66513864 GATGA G 43685 PASS INDEL;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.4715;AVGPOST=0.9946;RSQ=0.9925;ERATE=0.0009;THETA=0.0004;AC=1033;AN=2184 GT:DS:GL:BD 0.47298536 0
1 87559040 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7698;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87559157 . AAG A 56 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4015;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87559187 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5844;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87559236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4713;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0005;THETA=0.0005;AC=1029;AN=2184 GT:DS:GL:BD 0.47115386 0
1 87559262 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2704;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 87559308 . G GT 4209 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0267;AVGPOST=0.9993;RSQ=0.9887;ERATE=0.0004;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87559327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87559398 . T TG 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6252;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87559493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0790;AVGPOST=0.9989;RSQ=0.9946;ERATE=0.0004;THETA=0.0011;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 87559506 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87559541 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1907;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0006;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 87559614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87559661 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87559693 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87559711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4939;AVGPOST=0.9988;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 87559723 . AC A 331 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87559729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6292;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87559845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87559860 MERGED_DEL_2_8179 C ADELA . . SV;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0005;THETA=0.0005;CIEND=-17;33;CIPOS=-18;19;END=246447415;SOURCE=GenomeStrip_246373568_246447415;SVTYPE=DEL;AC=2;AN GT:DS:GL:BD 0.00091575 0
1 87559996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.975;LDAF=0.1886;AVGPOST=0.9968;RSQ=0.9915;ERATE=0.0006;THETA=0.0004;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 87560268 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0322;AVGPOST=0.9995;RSQ=0.9926;ERATE=0.0003;THETA=0.0007;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 87560272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.852;LDAF=0.0211;AVGPOST=0.9989;RSQ=0.9746;ERATE=0.0004;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87560301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0179;AVGPOST=0.9989;RSQ=0.9713;ERATE=0.0005;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87560323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.977;LDAF=0.4874;AVGPOST=0.9824;RSQ=0.9766;ERATE=0.0023;THETA=0.0005;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 87560333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0178;AVGPOST=0.9985;RSQ=0.9622;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87560349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9736;ERATE=0.0004;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87560389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0267;AVGPOST=0.9991;RSQ=0.9852;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87560391 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0938;AVGPOST=0.9978;RSQ=0.9897;ERATE=0.0003;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 87560400 rs34713966 TG T 24983 PASS INDEL;BAVGPOST=0.979;BRSQ=0.968;LDAF=0.3261;AVGPOST=0.9765;RSQ=0.9627;ERATE=0.0024;THETA=0.0004;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 87560414 . GC G 2403 PASS INDEL;BAVGPOST=0.916;BRSQ=0.820;LDAF=0.2869;AVGPOST=0.9410;RSQ=0.8951;ERATE=0.0045;THETA=0.0004;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 87560417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0323;AVGPOST=0.9990;RSQ=0.9858;ERATE=0.0004;THETA=0.0010;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 87560419 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.967;LDAF=0.3841;AVGPOST=0.9826;RSQ=0.9728;ERATE=0.0047;THETA=0.0004;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 87560442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4971;AVGPOST=0.9973;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 87560696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87560700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87560711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.2162;AVGPOST=0.9992;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 87560789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1419;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 87560932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6126;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87560986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0101;AVGPOST=0.9996;RSQ=0.9842;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87561031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3577;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0007;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 87561169 . A AT 8113 PASS INDEL;BAVGPOST=0.981;BRSQ=0.967;LDAF=0.3490;AVGPOST=0.9785;RSQ=0.9686;ERATE=0.0021;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 87561274 rs71776422 T TG 38607 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3568;AVGPOST=0.9955;RSQ=0.9925;ERATE=0.0007;THETA=0.0006;AC=779;AN=2184 GT:DS:GL:BD 0.35668498 0
1 87561276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87561293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1421;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0006;THETA=0.0011;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 87561297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1419;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 87561317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87561374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87561493 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87561498 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.806;LDAF=0.0203;AVGPOST=0.9916;RSQ=0.8534;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87561584 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0267;AVGPOST=0.9995;RSQ=0.9903;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87561705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87561756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8683;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87561774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3678;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 87561862 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.875;LDAF=0.0109;AVGPOST=0.9965;RSQ=0.9003;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87561901 . AT A 107 PASS INDEL;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87561926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5682;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87561932 . C CA 1488 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0122;AVGPOST=0.9992;RSQ=0.9683;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87561948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87561954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0047;AVGPOST=0.9975;RSQ=0.7803;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87561963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0052;AVGPOST=0.9971;RSQ=0.8090;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87562111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2171;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 87562207 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0524;AVGPOST=0.9993;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 87562284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8189;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87562304 rs35077215 C CA 23831 PASS INDEL;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2186;AVGPOST=0.9958;RSQ=0.9898;ERATE=0.0009;THETA=0.0009;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 87562315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.8978;ERATE=0.0004;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87562352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87562514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.3964;AVGPOST=0.9841;RSQ=0.9765;ERATE=0.0010;THETA=0.0005;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 87562610 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87562648 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6267;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87562686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.889;LDAF=0.0130;AVGPOST=0.9982;RSQ=0.9440;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87562860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87562876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0065;AVGPOST=0.9974;RSQ=0.8462;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87562938 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1715;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 87562963 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87562990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0467;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0033;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 87563156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3583;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0011;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 87563183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87563216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3582;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0006;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 87563254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1416;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 87563308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7923;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87563357 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3584;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0008;THETA=0.0005;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 87563375 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1415;AVGPOST=0.9994;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 87563450 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6015;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87563485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9089;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87563499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6347;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87563526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87563532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9708;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87563575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87563845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87563892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9292;AVGPOST=0.9984;RSQ=0.9918;ERATE=0.0004;THETA=0.0008;AC=2030;AN=2184 GT:DS:GL:BD 0.92948717 1
1 87563923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2416;AVGPOST=0.9967;RSQ=0.9935;ERATE=0.0006;THETA=0.0007;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 87563955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87563989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.6069;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87564000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0134;AVGPOST=0.9994;RSQ=0.9811;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87564245 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5847;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87564422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7973;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87564610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7008;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87564716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87564957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0646;AVGPOST=0.9962;RSQ=0.9788;ERATE=0.0004;THETA=0.0003;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 87565025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0058;AVGPOST=0.9963;RSQ=0.7658;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87565261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6153;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87565271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6144;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0007;THETA=0.0004;AC=1345;AN=2184 GT:DS:GL:BD 0.61584246 1
1 87565272 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9279;AVGPOST=0.9931;RSQ=0.9664;ERATE=0.0012;THETA=0.0004;AC=2029;AN=2184 GT:DS:GL:BD 0.92902929 1
1 87565388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3137;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 87565395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0125;AVGPOST=0.9991;RSQ=0.9687;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87565418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6381;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87565582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7515;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87565729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9297;AVGPOST=0.9991;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=2031;AN=2184 GT:DS:GL:BD 0.92994505 1
1 87565754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87565881 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87565884 . TTTC T 2050 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0141;AVGPOST=0.9984;RSQ=0.9557;ERATE=0.0004;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87565906 . CT C 736 PASS INDEL;BAVGPOST=0.880;BRSQ=0.382;LDAF=0.1392;AVGPOST=0.8399;RSQ=0.4611;ERATE=0.0232;THETA=0.0005;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 87565919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9997;RSQ=0.9888;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87565947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3160;AVGPOST=0.9950;RSQ=0.9925;ERATE=0.0007;THETA=0.0005;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 87566196 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4734;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87566423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87566476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0122;AVGPOST=0.9957;RSQ=0.8694;ERATE=0.0007;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87566481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8411;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87566516 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6153;AVGPOST=0.9979;RSQ=0.9973;ERATE=0.0006;THETA=0.0004;AC=1345;AN=2184 GT:DS:GL:BD 0.61584246 1
1 87566541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3139;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0005;THETA=0.0005;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 87566682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7549;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87566805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7429;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87566885 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87566899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.912;LDAF=0.9095;AVGPOST=0.9666;RSQ=0.8702;ERATE=0.0088;THETA=0.0007;AC=2007;AN=2184 GT:DS:GL:BD 0.91895604 1
1 87566910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87566987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.970;LDAF=0.3031;AVGPOST=0.9813;RSQ=0.9692;ERATE=0.0047;THETA=0.0006;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 87567016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8291;ERATE=0.0003;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87567175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87567191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87567245 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87567437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87567652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87567704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87567947 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87568029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7450;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87568109 . CAGA C 804 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87568185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0204;AVGPOST=0.9993;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87568336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8099;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87568464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2971;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 87568471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87568616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.732;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8750;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87568823 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7355;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87568845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.898;LDAF=0.0149;AVGPOST=0.9988;RSQ=0.9672;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87568870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7340;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87569043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6174;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0005;THETA=0.0010;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 87569147 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.813;LDAF=0.0083;AVGPOST=0.9938;RSQ=0.7274;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87569160 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4619;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87569176 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87569204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87569234 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87569312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87569371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8113;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87569423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6167;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0005;THETA=0.0008;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 87569511 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5835;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87569523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87569531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0038;AVGPOST=0.9973;RSQ=0.7194;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87569579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.961;LDAF=0.8061;AVGPOST=0.9909;RSQ=0.9779;ERATE=0.0005;THETA=0.0002;AC=1767;AN=2184 GT:DS:GL:BD 0.80906594 1
1 87569580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.981;LDAF=0.5329;AVGPOST=0.9919;RSQ=0.9874;ERATE=0.0005;THETA=0.0019;AC=1166;AN=2184 GT:DS:GL:BD 0.53388280 1
1 87569590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87569591 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7930;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87569639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0110;AVGPOST=0.9993;RSQ=0.9729;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87569664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9644;ERATE=0.0003;THETA=0.0023;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87569666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8590;ERATE=0.0014;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87569667 . AG A 15373 PASS INDEL;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1944;AVGPOST=0.9960;RSQ=0.9901;ERATE=0.0006;THETA=0.0009;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 87569690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.957;LDAF=0.0338;AVGPOST=0.9957;RSQ=0.9495;ERATE=0.0003;THETA=0.0007;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 87569739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8454;ERATE=0.0005;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87569760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87569771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.1923;AVGPOST=0.9932;RSQ=0.9833;ERATE=0.0005;THETA=0.0007;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 87569786 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.816;LDAF=0.0064;AVGPOST=0.9975;RSQ=0.8358;ERATE=0.0003;THETA=0.0021;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87569823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9671;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87569935 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6315;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87569945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.6258;AVGPOST=0.9930;RSQ=0.9888;ERATE=0.0009;THETA=0.0009;AC=1368;AN=2184 GT:DS:GL:BD 0.62637365 1
1 87569990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.6151;AVGPOST=0.9819;RSQ=0.9734;ERATE=0.0028;THETA=0.0004;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 87570023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5792;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87570072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.942;LDAF=0.7970;AVGPOST=0.9806;RSQ=0.9545;ERATE=0.0014;THETA=0.0028;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 87570111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5116;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87570151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87570153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87570162 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6178;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0007;THETA=0.0009;AC=1349;AN=2184 GT:DS:GL:BD 0.61767399 1
1 87570183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5940;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87570216 . ATTAT A 87 PASS INDEL;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6593;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87570245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8079;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87570342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5883;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=1286;AN=2184 GT:DS:GL:BD 0.58882785 1
1 87570387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5878;AVGPOST=0.9957;RSQ=0.9930;ERATE=0.0005;THETA=0.0036;AC=1286;AN=2184 GT:DS:GL:BD 0.58882785 1
1 87570413 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87570446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0265;AVGPOST=0.9982;RSQ=0.9679;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87570449 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0162;AVGPOST=0.9967;RSQ=0.9218;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87570457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0082;AVGPOST=0.9966;RSQ=0.8342;ERATE=0.0008;THETA=0.0016;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87570567 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87570593 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.6105;AVGPOST=0.9900;RSQ=0.9846;ERATE=0.0011;THETA=0.0003;AC=1336;AN=2184 GT:DS:GL:BD 0.61172163 1
1 87570682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0056;AVGPOST=0.9966;RSQ=0.7611;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87570711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.518;LDAF=0.0103;AVGPOST=0.9916;RSQ=0.6479;ERATE=0.0011;THETA=0.0036;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87570739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.786;BRSQ=0.643;LDAF=0.2584;AVGPOST=0.8564;RSQ=0.7839;ERATE=0.0006;THETA=0.0004;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 87570750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.786;BRSQ=0.641;LDAF=0.2591;AVGPOST=0.8569;RSQ=0.7835;ERATE=0.0007;THETA=0.0004;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 87570751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.796;BRSQ=0.670;LDAF=0.2647;AVGPOST=0.8504;RSQ=0.7686;ERATE=0.0009;THETA=0.0004;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 87570756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.838;BRSQ=0.781;LDAF=0.4300;AVGPOST=0.8357;RSQ=0.7914;ERATE=0.0100;THETA=0.0030;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 87570780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3073;ERATE=0.0006;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87570816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.6114;AVGPOST=0.9924;RSQ=0.9883;ERATE=0.0007;THETA=0.0009;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 87570889 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0095;AVGPOST=0.9977;RSQ=0.9123;ERATE=0.0004;THETA=0.0022;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87570911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9134;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87571094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87571095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4967;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87571096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.930;LDAF=0.5556;AVGPOST=0.9574;RSQ=0.9407;ERATE=0.0034;THETA=0.0017;AC=1228;AN=2184 GT:DS:GL:BD 0.56227106 1
1 87571125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.924;LDAF=0.3736;AVGPOST=0.9587;RSQ=0.9410;ERATE=0.0017;THETA=0.0006;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 87571136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.896;LDAF=0.7265;AVGPOST=0.9361;RSQ=0.8770;ERATE=0.0133;THETA=0.0007;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 87571155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87571308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7840;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87571359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9388;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87571444 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87571451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8374;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87571465 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.7152;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87571470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8099;AVGPOST=0.9947;RSQ=0.9870;ERATE=0.0005;THETA=0.0008;AC=1772;AN=2184 GT:DS:GL:BD 0.81135529 1
1 87571498 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9087;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87571513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1986;AVGPOST=0.9971;RSQ=0.9925;ERATE=0.0004;THETA=0.0024;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 87571614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87571651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8012;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87571664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8285;ERATE=0.0005;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87571693 . ATGTC A 51 PASS INDEL;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4392;ERATE=0.0007;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87571781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.773;LDAF=0.0377;AVGPOST=0.9791;RSQ=0.7969;ERATE=0.0012;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 87571940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87571968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.706;LDAF=0.0055;AVGPOST=0.9937;RSQ=0.5584;ERATE=0.0007;THETA=0.0035;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87572059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9464;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87572063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8589;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87572068 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4112;AVGPOST=0.9910;RSQ=0.9874;ERATE=0.0005;THETA=0.0004;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 87572090 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6362;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87572103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.945;LDAF=0.2462;AVGPOST=0.9725;RSQ=0.9427;ERATE=0.0046;THETA=0.0027;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 87572147 . CG C 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6910;ERATE=0.0003;THETA=0.0117;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87572147 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6650;ERATE=0.0004;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87572148 . G GT 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8648;ERATE=0.0004;THETA=0.0039;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87572245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.545;LDAF=0.0130;AVGPOST=0.9908;RSQ=0.7236;ERATE=0.0011;THETA=0.0093;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87572334 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.488;LDAF=0.0029;AVGPOST=0.9961;RSQ=0.3901;ERATE=0.0007;THETA=0.0064;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87572335 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.876;LDAF=0.7058;AVGPOST=0.9452;RSQ=0.9114;ERATE=0.0025;THETA=0.0084;AC=1564;AN=2184 GT:DS:GL:BD 0.71611720 1
1 87572346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.812;LDAF=0.2276;AVGPOST=0.9316;RSQ=0.8758;ERATE=0.0007;THETA=0.0008;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 87572386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.812;LDAF=0.2305;AVGPOST=0.9323;RSQ=0.8779;ERATE=0.0007;THETA=0.0044;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 87572396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5317;ERATE=0.0005;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87572399 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.641;LDAF=0.0041;AVGPOST=0.9974;RSQ=0.7219;ERATE=0.0006;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87572413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.904;LDAF=0.1468;AVGPOST=0.9790;RSQ=0.9554;ERATE=0.0008;THETA=0.0098;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 87572428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.854;BRSQ=0.768;LDAF=0.4797;AVGPOST=0.9041;RSQ=0.8670;ERATE=0.0035;THETA=0.0100;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 87572443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0081;AVGPOST=0.9929;RSQ=0.5940;ERATE=0.0007;THETA=0.0022;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87572445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.645;LDAF=0.1502;AVGPOST=0.9229;RSQ=0.7995;ERATE=0.0016;THETA=0.0007;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 87572461 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.739;BRSQ=0.677;LDAF=0.5222;AVGPOST=0.8181;RSQ=0.7965;ERATE=0.0008;THETA=0.0010;AC=1193;AN=2184 GT:DS:GL:BD 0.54624540 1
1 87572472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.736;BRSQ=0.671;LDAF=0.4995;AVGPOST=0.8019;RSQ=0.7748;ERATE=0.0030;THETA=0.0024;AC=1143;AN=2184 GT:DS:GL:BD 0.52335167 1
1 87572475 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.746;BRSQ=0.684;LDAF=0.5079;AVGPOST=0.8075;RSQ=0.7823;ERATE=0.0017;THETA=0.0019;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 87572480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.673;LDAF=0.0120;AVGPOST=0.9970;RSQ=0.8817;ERATE=0.0007;THETA=0.0056;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87572503 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.814;BRSQ=0.719;LDAF=0.6487;AVGPOST=0.8389;RSQ=0.7861;ERATE=0.0109;THETA=0.0035;AC=1476;AN=2184 GT:DS:GL:BD 0.67582417 1
1 87572505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.929;LDAF=0.0313;AVGPOST=0.9944;RSQ=0.9487;ERATE=0.0006;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87572654 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0144;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87572667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.974;LDAF=0.4743;AVGPOST=0.9765;RSQ=0.9675;ERATE=0.0007;THETA=0.0080;AC=1037;AN=2184 GT:DS:GL:BD 0.47481686 0
1 87572690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.0039;AVGPOST=0.9975;RSQ=0.7836;ERATE=0.0005;THETA=0.0122;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87572705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7218;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87572715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8165;ERATE=0.0004;THETA=0.0084;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87572720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.970;LDAF=0.3913;AVGPOST=0.9646;RSQ=0.9563;ERATE=0.0013;THETA=0.0050;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 87572729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6209;ERATE=0.0005;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87572730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.849;LDAF=0.7013;AVGPOST=0.9170;RSQ=0.8856;ERATE=0.0013;THETA=0.0059;AC=1561;AN=2184 GT:DS:GL:BD 0.71474361 1
1 87572744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.872;LDAF=0.3895;AVGPOST=0.9198;RSQ=0.8937;ERATE=0.0026;THETA=0.0125;AC=856;AN=2184 GT:DS:GL:BD 0.39194140 0
1 87572747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.740;LDAF=0.0253;AVGPOST=0.9832;RSQ=0.7760;ERATE=0.0010;THETA=0.0066;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87572748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.905;LDAF=0.6932;AVGPOST=0.9403;RSQ=0.9165;ERATE=0.0012;THETA=0.0015;AC=1524;AN=2184 GT:DS:GL:BD 0.69780219 1
1 87572766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.695;LDAF=0.0105;AVGPOST=0.9955;RSQ=0.8314;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87572768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.914;LDAF=0.6412;AVGPOST=0.9427;RSQ=0.9284;ERATE=0.0017;THETA=0.0184;AC=1403;AN=2184 GT:DS:GL:BD 0.64239925 1
1 87572773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.781;LDAF=0.0811;AVGPOST=0.9618;RSQ=0.8134;ERATE=0.0054;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 87572775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.809;LDAF=0.0604;AVGPOST=0.9745;RSQ=0.8433;ERATE=0.0052;THETA=0.0037;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 87572791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.595;LDAF=0.0061;AVGPOST=0.9941;RSQ=0.6554;ERATE=0.0021;THETA=0.0058;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87572793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.835;LDAF=0.0192;AVGPOST=0.9942;RSQ=0.8863;ERATE=0.0004;THETA=0.0047;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87572913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.577;LDAF=0.0074;AVGPOST=0.9928;RSQ=0.6773;ERATE=0.0005;THETA=0.0129;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87572929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0089;AVGPOST=0.9941;RSQ=0.7920;ERATE=0.0005;THETA=0.0032;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87572933 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6605;ERATE=0.0005;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87572936 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.930;LDAF=0.0428;AVGPOST=0.9938;RSQ=0.9484;ERATE=0.0005;THETA=0.0083;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 87572939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.956;LDAF=0.2008;AVGPOST=0.9609;RSQ=0.9155;ERATE=0.0008;THETA=0.0054;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 87572959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.677;LDAF=0.0470;AVGPOST=0.9666;RSQ=0.7182;ERATE=0.0030;THETA=0.0084;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87572990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.814;BRSQ=0.708;LDAF=0.3528;AVGPOST=0.8325;RSQ=0.7587;ERATE=0.0052;THETA=0.0020;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 87572999 . TG T 2899 PASS INDEL;BAVGPOST=0.811;BRSQ=0.700;LDAF=0.3516;AVGPOST=0.8153;RSQ=0.7340;ERATE=0.0052;THETA=0.0006;AC=749;AN=2184 GT:DS:GL:BD 0.34294870 0
1 87573001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.890;BRSQ=0.359;LDAF=0.1086;AVGPOST=0.8851;RSQ=0.5900;ERATE=0.0039;THETA=0.0072;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 87573054 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.845;BRSQ=0.797;LDAF=0.4939;AVGPOST=0.8702;RSQ=0.8525;ERATE=0.0017;THETA=0.0009;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 87573056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.640;LDAF=0.1353;AVGPOST=0.8981;RSQ=0.7118;ERATE=0.0040;THETA=0.0051;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 87573086 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.595;LDAF=0.0041;AVGPOST=0.9954;RSQ=0.4940;ERATE=0.0009;THETA=0.0104;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87573107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.826;BRSQ=0.720;LDAF=0.6120;AVGPOST=0.8186;RSQ=0.7470;ERATE=0.0149;THETA=0.0005;AC=1402;AN=2184 GT:DS:GL:BD 0.64194137 1
1 87573113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.692;LDAF=0.0101;AVGPOST=0.9936;RSQ=0.7447;ERATE=0.0008;THETA=0.0038;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87573116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.662;LDAF=0.0345;AVGPOST=0.9730;RSQ=0.6993;ERATE=0.0008;THETA=0.0011;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 87573141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.861;LDAF=0.1894;AVGPOST=0.9361;RSQ=0.8559;ERATE=0.0066;THETA=0.0003;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 87573156 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0029;AVGPOST=0.9963;RSQ=0.5247;ERATE=0.0007;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87573168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.597;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8052;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87573179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.924;LDAF=0.0507;AVGPOST=0.9897;RSQ=0.9208;ERATE=0.0005;THETA=0.0031;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 87573184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.806;LDAF=0.8099;AVGPOST=0.9303;RSQ=0.8411;ERATE=0.0017;THETA=0.0106;AC=1795;AN=2184 GT:DS:GL:BD 0.82188642 1
1 87573204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0482;AVGPOST=0.9899;RSQ=0.9244;ERATE=0.0007;THETA=0.0007;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 87573213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.827;LDAF=0.0454;AVGPOST=0.9789;RSQ=0.8255;ERATE=0.0023;THETA=0.0013;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 87573220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4256;ERATE=0.0006;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87573234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0036;AVGPOST=0.9962;RSQ=0.5899;ERATE=0.0008;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87573273 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.906;BRSQ=0.861;LDAF=0.6235;AVGPOST=0.9262;RSQ=0.9098;ERATE=0.0021;THETA=0.0087;AC=1379;AN=2184 GT:DS:GL:BD 0.63141024 1
1 87573295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.880;LDAF=0.0399;AVGPOST=0.9874;RSQ=0.8998;ERATE=0.0005;THETA=0.0047;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87573348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.881;LDAF=0.0406;AVGPOST=0.9883;RSQ=0.9016;ERATE=0.0007;THETA=0.0009;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 87573349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.897;BRSQ=0.807;LDAF=0.2449;AVGPOST=0.8897;RSQ=0.8242;ERATE=0.0024;THETA=0.0005;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 87573382 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0066;AVGPOST=0.9900;RSQ=0.3671;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87573386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.893;BRSQ=0.801;LDAF=0.2517;AVGPOST=0.8912;RSQ=0.8245;ERATE=0.0017;THETA=0.0007;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 87573388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.871;BRSQ=0.624;LDAF=0.1380;AVGPOST=0.9055;RSQ=0.7695;ERATE=0.0009;THETA=0.0013;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 87573403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.870;BRSQ=0.616;LDAF=0.1326;AVGPOST=0.9080;RSQ=0.7682;ERATE=0.0005;THETA=0.0010;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 87573404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.869;BRSQ=0.613;LDAF=0.1331;AVGPOST=0.9083;RSQ=0.7728;ERATE=0.0007;THETA=0.0009;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 87573411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.868;BRSQ=0.608;LDAF=0.1200;AVGPOST=0.8967;RSQ=0.6995;ERATE=0.0011;THETA=0.0126;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 87573418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.863;BRSQ=0.613;LDAF=0.1540;AVGPOST=0.8938;RSQ=0.7602;ERATE=0.0007;THETA=0.0012;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 87573422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.865;BRSQ=0.624;LDAF=0.1603;AVGPOST=0.8916;RSQ=0.7682;ERATE=0.0009;THETA=0.0064;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 87573426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.925;BRSQ=0.875;LDAF=0.3936;AVGPOST=0.9517;RSQ=0.9326;ERATE=0.0033;THETA=0.0096;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 87573475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.977;LDAF=0.4751;AVGPOST=0.9760;RSQ=0.9666;ERATE=0.0006;THETA=0.0011;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 87573573 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1998;AVGPOST=0.9861;RSQ=0.9695;ERATE=0.0005;THETA=0.0011;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 87573575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.976;LDAF=0.4610;AVGPOST=0.9803;RSQ=0.9726;ERATE=0.0006;THETA=0.0046;AC=1009;AN=2184 GT:DS:GL:BD 0.46199635 0
1 87573616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7189;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87573617 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8234;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87573662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.481;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.5872;ERATE=0.0005;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87573747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0052;AVGPOST=0.9938;RSQ=0.5183;ERATE=0.0010;THETA=0.0057;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87573895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8853;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87573924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5329;ERATE=0.0006;THETA=0.0105;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87573931 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6595;AVGPOST=0.9964;RSQ=0.9929;ERATE=0.0005;THETA=0.0004;AC=1441;AN=2184 GT:DS:GL:BD 0.65979856 1
1 87574028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8618;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87574116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1510;AVGPOST=0.9962;RSQ=0.9899;ERATE=0.0007;THETA=0.0030;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 87574121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0234;AVGPOST=0.9978;RSQ=0.9625;ERATE=0.0004;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87574205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4592;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87574239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87574277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8142;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87574311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0439;AVGPOST=0.9990;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 87574312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6717;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87574432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8241;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87574520 rs77712898 CCTT C 8289 PASS INDEL;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0657;AVGPOST=0.9987;RSQ=0.9923;ERATE=0.0004;THETA=0.0005;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 87574588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7384;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87574603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87574611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8615;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87574662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0672;AVGPOST=0.9984;RSQ=0.9906;ERATE=0.0005;THETA=0.0009;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 87574727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.855;LDAF=0.0331;AVGPOST=0.9900;RSQ=0.8995;ERATE=0.0004;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 87574831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6805;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87574848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0335;AVGPOST=0.9985;RSQ=0.9855;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 87574902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9355;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87574921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0064;AVGPOST=0.9988;RSQ=0.9207;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87574949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1774;AVGPOST=0.9942;RSQ=0.9841;ERATE=0.0006;THETA=0.0003;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 87574994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0352;AVGPOST=0.9979;RSQ=0.9795;ERATE=0.0003;THETA=0.0014;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 87574995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0040;AVGPOST=0.9949;RSQ=0.4580;ERATE=0.0010;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87574997 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.476;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6830;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87575008 . CCA C 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3329;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87575014 . ACAC A 135 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5459;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87575041 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.959;LDAF=0.3405;AVGPOST=0.9899;RSQ=0.9822;ERATE=0.0007;THETA=0.0003;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 87575052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.959;LDAF=0.3406;AVGPOST=0.9915;RSQ=0.9851;ERATE=0.0004;THETA=0.0006;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 87575061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8052;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87575074 . GCA G 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4344;ERATE=0.0011;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87575083 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3686;ERATE=0.0006;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87575125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1947;AVGPOST=0.9945;RSQ=0.9855;ERATE=0.0005;THETA=0.0005;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 87575282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0204;AVGPOST=0.9991;RSQ=0.9818;ERATE=0.0005;THETA=0.0034;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87575305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8647;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87575327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87575356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87575358 rs34105146 TG T 10479 PASS INDEL;BAVGPOST=0.993;BRSQ=0.976;LDAF=0.1337;AVGPOST=0.9869;RSQ=0.9551;ERATE=0.0006;THETA=0.0010;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 87575389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0045;AVGPOST=0.9964;RSQ=0.6707;ERATE=0.0008;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87575413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.960;LDAF=0.4922;AVGPOST=0.9550;RSQ=0.9346;ERATE=0.0039;THETA=0.0010;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 87575429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.561;LDAF=0.0062;AVGPOST=0.9937;RSQ=0.5691;ERATE=0.0009;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87575463 . TC T 998 PASS INDEL;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0268;AVGPOST=0.9964;RSQ=0.9451;ERATE=0.0006;THETA=0.0021;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87575466 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.474;LDAF=0.0221;AVGPOST=0.9702;RSQ=0.4739;ERATE=0.0024;THETA=0.0023;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87575510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0188;AVGPOST=0.9974;RSQ=0.9428;ERATE=0.0004;THETA=0.0012;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87575536 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6025;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87575684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87575820 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87575903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0257;AVGPOST=0.9979;RSQ=0.9684;ERATE=0.0003;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87575952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9421;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87575956 . CACAGA C 346 PASS INDEL;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7604;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87576054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0233;AVGPOST=0.9986;RSQ=0.9761;ERATE=0.0003;THETA=0.0114;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87576129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2526;AVGPOST=0.9921;RSQ=0.9872;ERATE=0.0009;THETA=0.0032;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 87576130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87576176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7035;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87576189 . CAAG C 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3669;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87576211 . G GGAGT 13885 PASS INDEL;BAVGPOST=0.992;BRSQ=0.954;LDAF=0.0737;AVGPOST=0.9915;RSQ=0.9575;ERATE=0.0007;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 87576271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87576302 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5863;ERATE=0.0005;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87576363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.1430;AVGPOST=0.9950;RSQ=0.9864;ERATE=0.0005;THETA=0.0004;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 87576396 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87576415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0358;AVGPOST=0.9975;RSQ=0.9762;ERATE=0.0003;THETA=0.0019;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87576606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8025;ERATE=0.0003;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87576626 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.931;LDAF=0.9580;AVGPOST=0.9947;RSQ=0.9553;ERATE=0.0005;THETA=0.0014;AC=2094;AN=2184 GT:DS:GL:BD 0.95879120 1
1 87576681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0130;AVGPOST=0.9974;RSQ=0.9299;ERATE=0.0004;THETA=0.0018;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87576781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.7598;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87576823 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.942;LDAF=0.1628;AVGPOST=0.9846;RSQ=0.9599;ERATE=0.0005;THETA=0.0018;AC=351;AN=2184 GT:DS:GL:BD 0.16071428 0
1 87576993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.943;LDAF=0.1624;AVGPOST=0.9848;RSQ=0.9612;ERATE=0.0003;THETA=0.0009;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 87577004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4293;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87577041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6876;ERATE=0.0003;THETA=0.0036;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87577059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0646;AVGPOST=0.9983;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 87577102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8507;ERATE=0.0005;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87577113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8424;ERATE=0.0005;THETA=0.0095;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87577538 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7976;ERATE=0.0006;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87577557 . CT C 17862 PASS INDEL;BAVGPOST=0.968;BRSQ=0.949;LDAF=0.5206;AVGPOST=0.9579;RSQ=0.9418;ERATE=0.0050;THETA=0.0004;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 87577642 rs34628185 TG T 62580 PASS INDEL;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.5365;AVGPOST=0.9881;RSQ=0.9838;ERATE=0.0009;THETA=0.0003;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 87577644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7570;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87577667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.975;LDAF=0.5315;AVGPOST=0.9860;RSQ=0.9810;ERATE=0.0012;THETA=0.0009;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 87577754 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7527;ERATE=0.0005;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87577820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4488;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87577848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.548;LDAF=0.0310;AVGPOST=0.9561;RSQ=0.4099;ERATE=0.0022;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87578159 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.809;BRSQ=0.667;LDAF=0.6351;AVGPOST=0.7879;RSQ=0.6802;ERATE=0.0156;THETA=0.0005;AC=1475;AN=2184 GT:DS:GL:BD 0.67536628 1
1 87578357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.839;BRSQ=0.427;LDAF=0.1632;AVGPOST=0.9551;RSQ=0.8722;ERATE=0.0013;THETA=0.0005;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 87578638 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.852;BRSQ=0.731;LDAF=0.6628;AVGPOST=0.8976;RSQ=0.8527;ERATE=0.0060;THETA=0.0007;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 87578643 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.835;BRSQ=0.693;LDAF=0.6553;AVGPOST=0.7973;RSQ=0.6968;ERATE=0.0095;THETA=0.0009;AC=1490;AN=2184 GT:DS:GL:BD 0.68223441 1
1 87578654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.876;BRSQ=0.722;LDAF=0.7582;AVGPOST=0.9128;RSQ=0.8396;ERATE=0.0053;THETA=0.0045;AC=1679;AN=2184 GT:DS:GL:BD 0.76877290 1
1 87578866 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0337;AVGPOST=0.9968;RSQ=0.9596;ERATE=0.0003;THETA=0.0091;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 87578963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8095;ERATE=0.0003;THETA=0.0106;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87579001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.8125;ERATE=0.0003;THETA=0.0043;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87579041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.884;LDAF=0.0162;AVGPOST=0.9965;RSQ=0.9154;ERATE=0.0005;THETA=0.0092;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87579111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.724;LDAF=0.0137;AVGPOST=0.9957;RSQ=0.8733;ERATE=0.0004;THETA=0.0121;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87579145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.401;LDAF=0.0075;AVGPOST=0.9887;RSQ=0.3786;ERATE=0.0011;THETA=0.0120;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87579164 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.545;LDAF=0.0060;AVGPOST=0.9910;RSQ=0.3839;ERATE=0.0012;THETA=0.0110;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87579193 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7749;ERATE=0.0005;THETA=0.0064;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87579437 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0136;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87579463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.6303;AVGPOST=0.9886;RSQ=0.9824;ERATE=0.0014;THETA=0.0016;AC=1376;AN=2184 GT:DS:GL:BD 0.63003665 1
1 87579640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87579673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87579766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9898;ERATE=0.0004;THETA=0.0040;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87579795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9806;ERATE=0.0007;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87579815 . TGCA T 357 PASS INDEL;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87579871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1006;AVGPOST=0.9982;RSQ=0.9938;ERATE=0.0012;THETA=0.0026;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 87579892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87579915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87579977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.942;LDAF=0.6192;AVGPOST=0.9501;RSQ=0.9253;ERATE=0.0040;THETA=0.0195;AC=1366;AN=2184 GT:DS:GL:BD 0.62545788 1
1 87579989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87580061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.869;LDAF=0.9664;AVGPOST=0.9920;RSQ=0.9067;ERATE=0.0004;THETA=0.0093;AC=2115;AN=2184 GT:DS:GL:BD 0.96840662 1
1 87580171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.693;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.6901;ERATE=0.0007;THETA=0.0064;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87580242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.963;LDAF=0.1552;AVGPOST=0.9862;RSQ=0.9714;ERATE=0.0007;THETA=0.0083;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 87580244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.621;LDAF=0.0177;AVGPOST=0.9844;RSQ=0.6359;ERATE=0.0004;THETA=0.0061;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87580303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.874;LDAF=0.0211;AVGPOST=0.9942;RSQ=0.8980;ERATE=0.0005;THETA=0.0162;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87580365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.918;LDAF=0.5093;AVGPOST=0.9624;RSQ=0.9436;ERATE=0.0031;THETA=0.0157;AC=1114;AN=2184 GT:DS:GL:BD 0.51007324 1
1 87580466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.836;LDAF=0.5707;AVGPOST=0.9168;RSQ=0.8773;ERATE=0.0122;THETA=0.0052;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 87580537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.742;LDAF=0.0182;AVGPOST=0.9926;RSQ=0.8293;ERATE=0.0013;THETA=0.0014;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87580541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7800;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87580542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.740;LDAF=0.0453;AVGPOST=0.9747;RSQ=0.7722;ERATE=0.0026;THETA=0.0035;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 87580543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.876;BRSQ=0.677;LDAF=0.2108;AVGPOST=0.8899;RSQ=0.7551;ERATE=0.0062;THETA=0.0030;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 87580554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.493;LDAF=0.0210;AVGPOST=0.9724;RSQ=0.4431;ERATE=0.0027;THETA=0.0082;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87580582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.373;LDAF=0.0088;AVGPOST=0.9861;RSQ=0.3249;ERATE=0.0011;THETA=0.0075;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87580586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.344;LDAF=0.0045;AVGPOST=0.9937;RSQ=0.3610;ERATE=0.0010;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87580587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.247;LDAF=0.0107;AVGPOST=0.9841;RSQ=0.3696;ERATE=0.0010;THETA=0.0028;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87580590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.826;BRSQ=0.441;LDAF=0.8211;AVGPOST=0.8133;RSQ=0.5200;ERATE=0.0075;THETA=0.0016;AC=1929;AN=2184 GT:DS:GL:BD 0.88324177 1
1 87580598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.755;BRSQ=0.597;LDAF=0.4908;AVGPOST=0.7637;RSQ=0.6560;ERATE=0.0075;THETA=0.0036;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 87580611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.720;BRSQ=0.528;LDAF=0.6134;AVGPOST=0.7195;RSQ=0.5784;ERATE=0.0146;THETA=0.0111;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 87580617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.728;BRSQ=0.383;LDAF=0.2751;AVGPOST=0.7455;RSQ=0.5087;ERATE=0.0234;THETA=0.0067;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 87580628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.378;LDAF=0.0453;AVGPOST=0.9633;RSQ=0.6789;ERATE=0.0011;THETA=0.0080;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 87580632 . G GT 24 PASS INDEL;BAVGPOST=0.998;BRSQ=0.336;LDAF=0.0075;AVGPOST=0.9872;RSQ=0.2283;ERATE=0.0013;THETA=0.0073;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87580633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.802;LDAF=0.0144;AVGPOST=0.9945;RSQ=0.8398;ERATE=0.0010;THETA=0.0042;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87580641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.805;BRSQ=0.542;LDAF=0.7720;AVGPOST=0.8012;RSQ=0.5906;ERATE=0.0180;THETA=0.0027;AC=1793;AN=2184 GT:DS:GL:BD 0.82097071 1
1 87580643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.306;LDAF=0.0038;AVGPOST=0.9958;RSQ=0.5169;ERATE=0.0008;THETA=0.0095;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87580660 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.699;LDAF=0.0567;AVGPOST=0.9697;RSQ=0.7868;ERATE=0.0040;THETA=0.0062;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 87580677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.669;LDAF=0.0263;AVGPOST=0.9779;RSQ=0.6900;ERATE=0.0033;THETA=0.0025;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87580688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.817;LDAF=0.0654;AVGPOST=0.9736;RSQ=0.8566;ERATE=0.0027;THETA=0.0018;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 87580689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9980;RSQ=0.2201;ERATE=0.0003;THETA=0.0051;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87580721 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.380;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5050;ERATE=0.0004;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87580727 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0140;AVGPOST=0.9952;RSQ=0.8645;ERATE=0.0004;THETA=0.0053;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87580732 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.466;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.4782;ERATE=0.0008;THETA=0.0096;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87580739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.799;LDAF=0.1318;AVGPOST=0.9617;RSQ=0.8808;ERATE=0.0022;THETA=0.0040;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 87580773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.921;LDAF=0.1606;AVGPOST=0.9797;RSQ=0.9517;ERATE=0.0005;THETA=0.0103;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 87580844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7388;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87580889 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0331;AVGPOST=0.9984;RSQ=0.9816;ERATE=0.0003;THETA=0.0031;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 87580895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0135;AVGPOST=0.9989;RSQ=0.9670;ERATE=0.0004;THETA=0.0016;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87580897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.932;BRSQ=0.891;LDAF=0.4772;AVGPOST=0.9372;RSQ=0.9178;ERATE=0.0008;THETA=0.0015;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 87581002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.901;LDAF=0.7062;AVGPOST=0.9478;RSQ=0.9202;ERATE=0.0006;THETA=0.0085;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 87581018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8603;ERATE=0.0004;THETA=0.0059;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87581088 . TG T 258 PASS INDEL;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.7793;ERATE=0.0006;THETA=0.0144;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87581208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87581219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.853;LDAF=0.0053;AVGPOST=0.9972;RSQ=0.8045;ERATE=0.0004;THETA=0.0084;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87581280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.792;LDAF=0.0772;AVGPOST=0.9771;RSQ=0.8802;ERATE=0.0005;THETA=0.0202;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 87581311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.381;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3223;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87581390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.357;LDAF=0.0154;AVGPOST=0.9804;RSQ=0.4902;ERATE=0.0030;THETA=0.0069;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87581395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.821;LDAF=0.0768;AVGPOST=0.9710;RSQ=0.8588;ERATE=0.0019;THETA=0.0097;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 87581399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.467;LDAF=0.0064;AVGPOST=0.9922;RSQ=0.5003;ERATE=0.0012;THETA=0.0114;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87581471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.481;LDAF=0.0033;AVGPOST=0.9964;RSQ=0.5109;ERATE=0.0005;THETA=0.0088;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87581486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.831;LDAF=0.1043;AVGPOST=0.9703;RSQ=0.8949;ERATE=0.0007;THETA=0.0038;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 87581540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.848;LDAF=0.0094;AVGPOST=0.9951;RSQ=0.7832;ERATE=0.0005;THETA=0.0115;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87581542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8833;ERATE=0.0003;THETA=0.0169;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87581625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9058;ERATE=0.0003;THETA=0.0063;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87581645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.848;BRSQ=0.777;LDAF=0.5580;AVGPOST=0.8261;RSQ=0.7756;ERATE=0.0035;THETA=0.0042;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 87581743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.390;LDAF=0.0073;AVGPOST=0.9917;RSQ=0.4980;ERATE=0.0008;THETA=0.0072;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87581818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.832;BRSQ=0.759;LDAF=0.4557;AVGPOST=0.8466;RSQ=0.8192;ERATE=0.0003;THETA=0.0020;AC=1002;AN=2184 GT:DS:GL:BD 0.45879120 0
1 87581883 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.833;BRSQ=0.760;LDAF=0.4568;AVGPOST=0.8453;RSQ=0.8167;ERATE=0.0007;THETA=0.0150;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 87581884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.457;LDAF=0.0048;AVGPOST=0.9946;RSQ=0.5428;ERATE=0.0005;THETA=0.0157;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87581957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.762;LDAF=0.0293;AVGPOST=0.9890;RSQ=0.8513;ERATE=0.0009;THETA=0.0151;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87581963 . A AT 758 PASS INDEL;BAVGPOST=0.990;BRSQ=0.680;LDAF=0.0095;AVGPOST=0.9941;RSQ=0.7353;ERATE=0.0005;THETA=0.0149;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87582027 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.611;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5343;ERATE=0.0006;THETA=0.0101;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87582048 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.648;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7981;ERATE=0.0004;THETA=0.0151;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87582062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.885;BRSQ=0.819;LDAF=0.5042;AVGPOST=0.8968;RSQ=0.8611;ERATE=0.0011;THETA=0.0034;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 87582122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.799;LDAF=0.0103;AVGPOST=0.9952;RSQ=0.8052;ERATE=0.0007;THETA=0.0025;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87582128 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.884;BRSQ=0.815;LDAF=0.4964;AVGPOST=0.8934;RSQ=0.8572;ERATE=0.0009;THETA=0.0097;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 87582146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.701;LDAF=0.0179;AVGPOST=0.9910;RSQ=0.8061;ERATE=0.0005;THETA=0.0283;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87582224 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.4475;ERATE=0.0004;THETA=0.0121;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87582285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.742;LDAF=0.0135;AVGPOST=0.9919;RSQ=0.7945;ERATE=0.0004;THETA=0.0127;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87582309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.575;LDAF=0.0051;AVGPOST=0.9939;RSQ=0.5290;ERATE=0.0012;THETA=0.0129;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87582357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.591;LDAF=0.0087;AVGPOST=0.9939;RSQ=0.7040;ERATE=0.0009;THETA=0.0214;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87582361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0082;AVGPOST=0.9946;RSQ=0.7620;ERATE=0.0009;THETA=0.0040;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87582407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.8968;ERATE=0.0003;THETA=0.0108;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87582444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7720;ERATE=0.0005;THETA=0.0073;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87582452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.531;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4352;ERATE=0.0006;THETA=0.0131;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87582483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.867;BRSQ=0.390;LDAF=0.1277;AVGPOST=0.8747;RSQ=0.5396;ERATE=0.0050;THETA=0.0152;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 87582627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.347;LDAF=0.0735;AVGPOST=0.9121;RSQ=0.4728;ERATE=0.0046;THETA=0.0068;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87582630 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.809;BRSQ=0.254;LDAF=0.8019;AVGPOST=0.7558;RSQ=0.3844;ERATE=0.0181;THETA=0.0063;AC=1927;AN=2184 GT:DS:GL:BD 0.88232601 1
1 87582663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.872;BRSQ=0.709;LDAF=0.2399;AVGPOST=0.8042;RSQ=0.6161;ERATE=0.0010;THETA=0.0102;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 87582674 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.656;LDAF=0.0649;AVGPOST=0.9523;RSQ=0.7300;ERATE=0.0023;THETA=0.0220;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 87582675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.248;LDAF=0.0081;AVGPOST=0.9874;RSQ=0.3358;ERATE=0.0005;THETA=0.0054;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87582695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.305;LDAF=0.0099;AVGPOST=0.9827;RSQ=0.2780;ERATE=0.0018;THETA=0.0131;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87582713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.397;LDAF=0.0066;AVGPOST=0.9895;RSQ=0.3273;ERATE=0.0010;THETA=0.0143;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87582722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.611;LDAF=0.0093;AVGPOST=0.9904;RSQ=0.5904;ERATE=0.0010;THETA=0.0148;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87582737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.616;LDAF=0.1163;AVGPOST=0.9186;RSQ=0.6802;ERATE=0.0084;THETA=0.0015;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 87582745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.852;LDAF=0.6575;AVGPOST=0.9037;RSQ=0.8566;ERATE=0.0078;THETA=0.0011;AC=1457;AN=2184 GT:DS:GL:BD 0.66712457 1
1 87582801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0071;AVGPOST=0.9973;RSQ=0.8532;ERATE=0.0005;THETA=0.0183;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87582802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4204;ERATE=0.0005;THETA=0.0191;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87582824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9527;ERATE=0.0003;THETA=0.0146;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87582995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.3328;AVGPOST=0.9816;RSQ=0.9733;ERATE=0.0005;THETA=0.0037;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 87583058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4249;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87583214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87583248 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6292;ERATE=0.0005;THETA=0.0046;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87583293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0428;AVGPOST=0.9979;RSQ=0.9817;ERATE=0.0004;THETA=0.0048;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 87583333 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87583368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.5893;AVGPOST=0.9896;RSQ=0.9871;ERATE=0.0003;THETA=0.0023;AC=1290;AN=2184 GT:DS:GL:BD 0.59065932 1
1 87583424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9067;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87583427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9282;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87583435 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.5923;AVGPOST=0.9894;RSQ=0.9870;ERATE=0.0003;THETA=0.0007;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 87583439 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6796;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87583452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8324;ERATE=0.0007;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87583470 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7951;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87583600 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2985;AVGPOST=0.9943;RSQ=0.9903;ERATE=0.0006;THETA=0.0005;AC=650;AN=2184 GT:DS:GL:BD 0.29761904 0
1 87583615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8921;ERATE=0.0005;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87583648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87583767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87583773 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7335;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87583805 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0450;AVGPOST=0.9993;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 87583855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87583870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87583949 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0829;AVGPOST=0.9958;RSQ=0.9781;ERATE=0.0007;THETA=0.0032;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 87583989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.514;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5730;ERATE=0.0006;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87583994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.309;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4116;ERATE=0.0006;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87584012 . AC A 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5364;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87584099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.954;LDAF=0.0816;AVGPOST=0.9945;RSQ=0.9705;ERATE=0.0009;THETA=0.0013;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 87584239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0811;AVGPOST=0.9967;RSQ=0.9844;ERATE=0.0004;THETA=0.0006;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 87584421 . AC A 368 PASS INDEL;BAVGPOST=0.995;BRSQ=0.653;LDAF=0.0087;AVGPOST=0.9917;RSQ=0.5830;ERATE=0.0012;THETA=0.0043;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87584450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6448;ERATE=0.0006;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87584483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0077;AVGPOST=0.9973;RSQ=0.8404;ERATE=0.0004;THETA=0.0033;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87584586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0083;AVGPOST=0.9981;RSQ=0.9029;ERATE=0.0004;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87584695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0094;AVGPOST=0.9980;RSQ=0.9194;ERATE=0.0004;THETA=0.0034;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87584827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.452;LDAF=0.0048;AVGPOST=0.9946;RSQ=0.5505;ERATE=0.0009;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87584914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0193;AVGPOST=0.9908;RSQ=0.8084;ERATE=0.0004;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87584959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.887;BRSQ=0.766;LDAF=0.2884;AVGPOST=0.8790;RSQ=0.7872;ERATE=0.0010;THETA=0.0025;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 87584992 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.5858;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87585060 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0032;AVGPOST=0.9966;RSQ=0.5399;ERATE=0.0008;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87585083 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.913;LDAF=0.0205;AVGPOST=0.9955;RSQ=0.9143;ERATE=0.0009;THETA=0.0019;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87585147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87585304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0820;AVGPOST=0.9979;RSQ=0.9887;ERATE=0.0004;THETA=0.0012;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 87585367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0042;AVGPOST=0.9970;RSQ=0.6944;ERATE=0.0010;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87585441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0042;AVGPOST=0.9970;RSQ=0.7116;ERATE=0.0004;THETA=0.0043;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87585483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6875;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87585567 . T TG 61 PASS INDEL;BAVGPOST=0.996;BRSQ=0.676;LDAF=0.0051;AVGPOST=0.9942;RSQ=0.5813;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87585591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3320;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87585631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.604;LDAF=0.0063;AVGPOST=0.9952;RSQ=0.6660;ERATE=0.0020;THETA=0.0028;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87585670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4380;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87585865 . ACT A 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.552;LDAF=0.0032;AVGPOST=0.9954;RSQ=0.4344;ERATE=0.0006;THETA=0.0049;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87585954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0808;AVGPOST=0.9981;RSQ=0.9891;ERATE=0.0004;THETA=0.0054;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 87586016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0816;AVGPOST=0.9980;RSQ=0.9890;ERATE=0.0004;THETA=0.0031;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 87586041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8107;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87586045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.0897;AVGPOST=0.9942;RSQ=0.9713;ERATE=0.0006;THETA=0.0035;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 87586090 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.910;BRSQ=0.839;LDAF=0.3783;AVGPOST=0.9102;RSQ=0.8626;ERATE=0.0031;THETA=0.0047;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 87586094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.775;LDAF=0.0084;AVGPOST=0.9948;RSQ=0.7630;ERATE=0.0016;THETA=0.0035;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87586103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.938;LDAF=0.0146;AVGPOST=0.9980;RSQ=0.9443;ERATE=0.0004;THETA=0.0054;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87586131 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8902;ERATE=0.0003;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87586172 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0819;AVGPOST=0.9990;RSQ=0.9941;ERATE=0.0004;THETA=0.0045;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 87586224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0823;AVGPOST=0.9987;RSQ=0.9924;ERATE=0.0004;THETA=0.0055;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 87586322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0817;AVGPOST=0.9954;RSQ=0.9770;ERATE=0.0005;THETA=0.0055;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 87586364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.0890;AVGPOST=0.9912;RSQ=0.9582;ERATE=0.0004;THETA=0.0089;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 87586374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.829;LDAF=0.0128;AVGPOST=0.9931;RSQ=0.7897;ERATE=0.0005;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87586466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7373;ERATE=0.0005;THETA=0.0076;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87586608 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0112;AVGPOST=0.9979;RSQ=0.9257;ERATE=0.0005;THETA=0.0145;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87586629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0083;AVGPOST=0.9978;RSQ=0.8826;ERATE=0.0007;THETA=0.0119;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87586666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0034;AVGPOST=0.9969;RSQ=0.6147;ERATE=0.0014;THETA=0.0131;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87586689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.780;LDAF=0.0055;AVGPOST=0.9977;RSQ=0.8269;ERATE=0.0005;THETA=0.0082;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87586697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.866;LDAF=0.0072;AVGPOST=0.9966;RSQ=0.8090;ERATE=0.0005;THETA=0.0127;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87586719 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8786;ERATE=0.0004;THETA=0.0081;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87586785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.724;LDAF=0.0086;AVGPOST=0.9945;RSQ=0.7346;ERATE=0.0009;THETA=0.0096;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87586859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4680;ERATE=0.0005;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87586953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0004;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87587013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7497;ERATE=0.0011;THETA=0.0084;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87587019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.933;LDAF=0.0792;AVGPOST=0.9785;RSQ=0.8924;ERATE=0.0015;THETA=0.0071;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 87587039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.707;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.7880;ERATE=0.0004;THETA=0.0090;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87587069 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0064;AVGPOST=0.9975;RSQ=0.8611;ERATE=0.0004;THETA=0.0206;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87587075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.796;LDAF=0.0387;AVGPOST=0.9814;RSQ=0.8039;ERATE=0.0007;THETA=0.0061;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 87587126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5443;ERATE=0.0004;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87587138 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.824;LDAF=0.0123;AVGPOST=0.9960;RSQ=0.8935;ERATE=0.0010;THETA=0.0128;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87587144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4712;ERATE=0.0005;THETA=0.0238;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87587149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.810;LDAF=0.1920;AVGPOST=0.9347;RSQ=0.8495;ERATE=0.0023;THETA=0.0020;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 87587172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.857;LDAF=0.0488;AVGPOST=0.9870;RSQ=0.9023;ERATE=0.0020;THETA=0.0079;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 87587182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3280;ERATE=0.0008;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87587257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.747;LDAF=0.0689;AVGPOST=0.9560;RSQ=0.7411;ERATE=0.0033;THETA=0.0265;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 87587265 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.629;LDAF=0.0212;AVGPOST=0.9851;RSQ=0.7128;ERATE=0.0012;THETA=0.0179;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87587274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.647;LDAF=0.0093;AVGPOST=0.9951;RSQ=0.7756;ERATE=0.0005;THETA=0.0092;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87587301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.781;LDAF=0.1013;AVGPOST=0.9447;RSQ=0.7722;ERATE=0.0064;THETA=0.0145;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 87587306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.444;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3810;ERATE=0.0006;THETA=0.0159;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87587309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.415;LDAF=0.0034;AVGPOST=0.9941;RSQ=0.2876;ERATE=0.0008;THETA=0.0125;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87587331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.831;LDAF=0.1093;AVGPOST=0.9489;RSQ=0.8125;ERATE=0.0052;THETA=0.0223;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 87587376 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3555;ERATE=0.0006;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87587444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6831;ERATE=0.0008;THETA=0.0125;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87587485 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.778;LDAF=0.2265;AVGPOST=0.8973;RSQ=0.8030;ERATE=0.0144;THETA=0.0085;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 87587496 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.810;LDAF=0.0231;AVGPOST=0.9883;RSQ=0.8024;ERATE=0.0007;THETA=0.0283;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87587594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.814;LDAF=0.2386;AVGPOST=0.9143;RSQ=0.8485;ERATE=0.0040;THETA=0.0063;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 87587598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0426;AVGPOST=0.9939;RSQ=0.9482;ERATE=0.0005;THETA=0.0186;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 87587650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.851;LDAF=0.1126;AVGPOST=0.9598;RSQ=0.8536;ERATE=0.0092;THETA=0.0276;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 87587656 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.833;LDAF=0.2183;AVGPOST=0.9303;RSQ=0.8502;ERATE=0.0164;THETA=0.0114;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 87587686 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.941;LDAF=0.1314;AVGPOST=0.9842;RSQ=0.9560;ERATE=0.0035;THETA=0.0176;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 87587720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7169;ERATE=0.0004;THETA=0.0060;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87587722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.861;LDAF=0.0081;AVGPOST=0.9980;RSQ=0.9068;ERATE=0.0004;THETA=0.0172;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87587731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0391;AVGPOST=0.9978;RSQ=0.9804;ERATE=0.0004;THETA=0.0181;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 87587819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8830;ERATE=0.0005;THETA=0.0055;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87587893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8764;ERATE=0.0004;THETA=0.0115;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87587894 . G GTT 189 PASS INDEL;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8592;ERATE=0.0005;THETA=0.0221;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87587901 . T TGA 335 PASS INDEL;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9442;ERATE=0.0004;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87587907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7624;ERATE=0.0003;THETA=0.0087;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87587917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.409;LDAF=0.0031;AVGPOST=0.9950;RSQ=0.4245;ERATE=0.0010;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87587921 . CAT C 539 PASS INDEL;BAVGPOST=0.998;BRSQ=0.817;LDAF=0.0040;AVGPOST=0.9979;RSQ=0.7784;ERATE=0.0018;THETA=0.0105;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87587939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0144;AVGPOST=0.9987;RSQ=0.9623;ERATE=0.0003;THETA=0.0021;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87587950 . GT G 1343 PASS INDEL;BAVGPOST=0.994;BRSQ=0.780;LDAF=0.0108;AVGPOST=0.9966;RSQ=0.8656;ERATE=0.0006;THETA=0.0053;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87587992 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.850;LDAF=0.0286;AVGPOST=0.9896;RSQ=0.8536;ERATE=0.0023;THETA=0.0173;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 87587993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.789;LDAF=0.0278;AVGPOST=0.9862;RSQ=0.8062;ERATE=0.0008;THETA=0.0040;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87588029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0143;AVGPOST=0.9986;RSQ=0.9567;ERATE=0.0004;THETA=0.0252;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87588061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0379;AVGPOST=0.9979;RSQ=0.9772;ERATE=0.0004;THETA=0.0084;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 87588062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0044;AVGPOST=0.9978;RSQ=0.7895;ERATE=0.0007;THETA=0.0087;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87588131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0005;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87588149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8419;ERATE=0.0003;THETA=0.0104;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87588178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.775;LDAF=0.0059;AVGPOST=0.9974;RSQ=0.8179;ERATE=0.0008;THETA=0.0129;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87588182 . AGT A 236 PASS INDEL;BAVGPOST=0.997;BRSQ=0.677;LDAF=0.0054;AVGPOST=0.9951;RSQ=0.6053;ERATE=0.0024;THETA=0.0073;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87588199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.796;LDAF=0.0294;AVGPOST=0.9886;RSQ=0.8516;ERATE=0.0004;THETA=0.0090;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87588241 . TG T 395 PASS INDEL;BAVGPOST=0.995;BRSQ=0.630;LDAF=0.0071;AVGPOST=0.9931;RSQ=0.5909;ERATE=0.0009;THETA=0.0076;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87588321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.934;LDAF=0.3072;AVGPOST=0.9419;RSQ=0.9249;ERATE=0.0016;THETA=0.0057;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 87588376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.903;LDAF=0.3265;AVGPOST=0.9210;RSQ=0.8870;ERATE=0.0127;THETA=0.0016;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 87588389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0003;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87588405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.884;LDAF=0.0249;AVGPOST=0.9916;RSQ=0.8744;ERATE=0.0015;THETA=0.0083;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87588406 . GGT G 2271 PASS INDEL;BAVGPOST=0.969;BRSQ=0.898;LDAF=0.1376;AVGPOST=0.9667;RSQ=0.9070;ERATE=0.0025;THETA=0.0048;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 87588444 . GTGTA G 16770 PASS INDEL;BAVGPOST=0.982;BRSQ=0.939;LDAF=0.1399;AVGPOST=0.9838;RSQ=0.9529;ERATE=0.0012;THETA=0.0082;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 87588449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0172;AVGPOST=0.9960;RSQ=0.9033;ERATE=0.0008;THETA=0.0054;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87588484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.0902;AVGPOST=0.9948;RSQ=0.9771;ERATE=0.0005;THETA=0.0011;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 87588524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.727;LDAF=0.0449;AVGPOST=0.9684;RSQ=0.7166;ERATE=0.0150;THETA=0.0025;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87588543 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.623;LDAF=0.0137;AVGPOST=0.9824;RSQ=0.5159;ERATE=0.0046;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87588555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8283;ERATE=0.0007;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87588571 rs71580203 TAGAA T 414 PASS INDEL;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8521;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87588667 . C CCTGG 7458 PASS INDEL;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0218;AVGPOST=0.9972;RSQ=0.9546;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87588715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87588836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87588855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0236;AVGPOST=0.9989;RSQ=0.9820;ERATE=0.0003;THETA=0.0069;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 87588902 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7551;ERATE=0.0005;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87588913 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8645;ERATE=0.0008;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87588935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87589190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87589202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6269;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87589223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87589232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87589386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0429;AVGPOST=0.9990;RSQ=0.9924;ERATE=0.0002;THETA=0.0014;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 87589391 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8506;ERATE=0.0003;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87589402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87589423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7654;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87589535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2499;AVGPOST=0.9968;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 87589549 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87589650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87589699 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87589726 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87589777 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7719;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87589782 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87589802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87589815 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8071;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87589847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87589850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3644;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 87589855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3640;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0005;THETA=0.0004;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 87589869 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87589929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7588;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87589953 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87589985 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7467;ERATE=0.0012;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87590039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6547;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87590055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8143;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87590089 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9853;ERATE=0.0002;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87590127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8709;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87590130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87590235 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87590261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9195;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87590317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6354;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87590324 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4071;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=889;AN=2184 GT:DS:GL:BD 0.40705130 0
1 87590356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9283;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87590463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9168;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87590473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87590527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.7070;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87590577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87590907 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5774;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87590981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87591029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87591136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7594;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87591273 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87591326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9593;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87591480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8332;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87591512 rs5772143 CA C 22496 PASS INDEL;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2464;AVGPOST=0.9937;RSQ=0.9872;ERATE=0.0004;THETA=0.0008;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 87591530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8787;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87591567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8852;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87591597 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8756;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87591647 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87591713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9946;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87591718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9802;ERATE=0.0002;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87591763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7665;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87591889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0088;AVGPOST=0.9984;RSQ=0.9235;ERATE=0.0003;THETA=0.0022;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87591917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5238;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87591991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9608;ERATE=0.0003;THETA=0.0015;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87592116 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6805;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87592141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.8137;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87592346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8397;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87592586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8912;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87592649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9016;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87592692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.6863;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87592774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0057;AVGPOST=0.9956;RSQ=0.7682;ERATE=0.0002;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87592850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2532;AVGPOST=0.9972;RSQ=0.9941;ERATE=0.0005;THETA=0.0002;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 87592961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87593023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0071;AVGPOST=0.9978;RSQ=0.8838;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87593032 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4783;ERATE=0.0004;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87593184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6517;ERATE=0.0005;THETA=0.0101;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87593226 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9706;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87593630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0113;AVGPOST=0.9969;RSQ=0.8980;ERATE=0.0005;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87593723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4282;AVGPOST=0.9936;RSQ=0.9904;ERATE=0.0006;THETA=0.0003;AC=932;AN=2184 GT:DS:GL:BD 0.42673993 0
1 87593761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6190;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87593770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0049;AVGPOST=0.9966;RSQ=0.7244;ERATE=0.0014;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87593897 . TTTG T 438 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87594028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7565;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87594094 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87594097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5273;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87594101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2682;AVGPOST=0.9958;RSQ=0.9928;ERATE=0.0004;THETA=0.0002;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 87594123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87594142 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7685;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87594246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87594289 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5933;ERATE=0.0009;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87594296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87594448 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3294;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 87594463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3300;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0007;THETA=0.0003;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 87594537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3300;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0004;THETA=0.0013;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 87594632 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87594708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9007;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87594734 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3295;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 87594784 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2655;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0005;THETA=0.0004;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 87595017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3928;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87595028 . GC G 339 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8708;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87595030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.8845;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87595074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9581;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87595095 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4948;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87595118 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.7969;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87595119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7398;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87595294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2049;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 87595312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87595335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7342;AVGPOST=0.9968;RSQ=0.9941;ERATE=0.0005;THETA=0.0005;AC=1606;AN=2184 GT:DS:GL:BD 0.73534799 1
1 87595343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9555;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87595347 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87595518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87595766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3297;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 87595809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87595921 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87595946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3292;AVGPOST=0.9967;RSQ=0.9941;ERATE=0.0009;THETA=0.0003;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 87595948 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6881;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87595989 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87596075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0040;AVGPOST=0.9976;RSQ=0.7404;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87596099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0144;AVGPOST=0.9991;RSQ=0.9726;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87596100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.3985;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87596140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87596164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.775;LDAF=0.0089;AVGPOST=0.9940;RSQ=0.7373;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87596185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.956;LDAF=0.5190;AVGPOST=0.9705;RSQ=0.9578;ERATE=0.0055;THETA=0.0003;AC=1144;AN=2184 GT:DS:GL:BD 0.52380955 1
1 87596188 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.5267;AVGPOST=0.9930;RSQ=0.9893;ERATE=0.0009;THETA=0.0003;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 87596250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2206;AVGPOST=0.9977;RSQ=0.9951;ERATE=0.0004;THETA=0.0005;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 87596317 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.970;LDAF=0.1981;AVGPOST=0.9929;RSQ=0.9829;ERATE=0.0018;THETA=0.0003;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 87596431 . AT A 22645 PASS INDEL;BAVGPOST=0.943;BRSQ=0.812;LDAF=0.8127;AVGPOST=0.8923;RSQ=0.7374;ERATE=0.0185;THETA=0.0003;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 87596436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0088;AVGPOST=0.9926;RSQ=0.6628;ERATE=0.0007;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87596648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7695;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87596725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.842;LDAF=0.0130;AVGPOST=0.9952;RSQ=0.8508;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87596751 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0458;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0004;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 87596819 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9531;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87596833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87596880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87596989 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7346;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 87597027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5305;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0006;THETA=0.0002;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 87597075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7271;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87597119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87597193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6330;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87597522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0071;AVGPOST=0.9977;RSQ=0.8641;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87597592 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87597742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87597752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0457;AVGPOST=0.9997;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 87597805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87597806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.595;LDAF=0.0075;AVGPOST=0.9913;RSQ=0.5394;ERATE=0.0030;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87597844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2661;AVGPOST=0.9967;RSQ=0.9934;ERATE=0.0009;THETA=0.0003;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 87597855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2575;AVGPOST=0.9960;RSQ=0.9929;ERATE=0.0005;THETA=0.0013;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 87597972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5756;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87597993 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.688;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6728;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87598009 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87598134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87598162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87598192 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3294;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 87598209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2659;AVGPOST=0.9972;RSQ=0.9938;ERATE=0.0006;THETA=0.0011;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 87598238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87598352 . ATG A 160 PASS INDEL;BAVGPOST=0.989;BRSQ=0.733;LDAF=0.0227;AVGPOST=0.9795;RSQ=0.6138;ERATE=0.0108;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87598354 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0031;AVGPOST=0.9985;RSQ=0.8113;ERATE=0.0007;THETA=0.0061;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87598382 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0457;AVGPOST=0.9988;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 87598398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87598451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87598486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0011;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87598489 rs56164436 A AG 76810 PASS INDEL;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.7362;AVGPOST=0.9706;RSQ=0.9487;ERATE=0.0057;THETA=0.0002;AC=1626;AN=2184 GT:DS:GL:BD 0.74450547 1
1 87598504 rs34951178 T TG 39264 PASS INDEL;BAVGPOST=0.973;BRSQ=0.943;LDAF=0.7516;AVGPOST=0.9846;RSQ=0.9708;ERATE=0.0017;THETA=0.0003;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 87598507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6417;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87598550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0174;AVGPOST=0.9974;RSQ=0.9513;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87598557 . G GC 25 PASS INDEL;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0052;AVGPOST=0.9935;RSQ=0.5298;ERATE=0.0007;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87598666 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0158;AVGPOST=0.9994;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87598668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87598669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6706;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87598685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87598754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87598794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7912;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87598809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8376;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87598909 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9154;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87598953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87598983 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87599008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5434;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=1186;AN=2184 GT:DS:GL:BD 0.54304028 1
1 87599040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9579;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87599101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5864;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87599102 . TG T 282 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8689;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87599235 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9533;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87599347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87599387 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0213;AVGPOST=0.9985;RSQ=0.9730;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87599498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0947;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0006;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87599502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8761;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87599566 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9104;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87599809 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8168;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87599853 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0044;AVGPOST=0.9977;RSQ=0.8075;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87599868 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4450;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87599983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87599992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8424;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87599997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1258;AVGPOST=0.9966;RSQ=0.9879;ERATE=0.0005;THETA=0.0007;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 87600030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0620;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 87600031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.364;LDAF=0.0089;AVGPOST=0.9905;RSQ=0.6115;ERATE=0.0007;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87600118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.426;LDAF=0.0024;AVGPOST=0.9959;RSQ=0.2966;ERATE=0.0009;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87600119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0084;AVGPOST=0.9938;RSQ=0.6851;ERATE=0.0011;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87600166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3106;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87600205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0162;AVGPOST=0.9968;RSQ=0.9104;ERATE=0.0008;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87600223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0779;AVGPOST=0.9976;RSQ=0.9864;ERATE=0.0007;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 87600225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0998;AVGPOST=0.9967;RSQ=0.9868;ERATE=0.0005;THETA=0.0021;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 87600293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0952;AVGPOST=0.9962;RSQ=0.9837;ERATE=0.0008;THETA=0.0005;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 87600324 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5745;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87600343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0949;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0004;THETA=0.0008;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87600372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7724;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87600446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0771;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0004;THETA=0.0007;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 87600466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0043;AVGPOST=0.9964;RSQ=0.7158;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87600496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87600679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87600827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87600856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87600895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87600997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87601042 . GGCCATCAGT G 4181 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0209;AVGPOST=0.9981;RSQ=0.9625;ERATE=0.0006;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87601164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9612;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87601230 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87601304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0946;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0004;THETA=0.0007;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87601440 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0633;AVGPOST=0.9982;RSQ=0.9883;ERATE=0.0005;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 87601508 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8915;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87601611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87601839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0011;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87601875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0940;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0004;THETA=0.0005;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 87601895 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6236;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87601898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8494;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87601905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7387;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87602226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1938;AVGPOST=0.9961;RSQ=0.9920;ERATE=0.0007;THETA=0.0008;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 87602245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3239;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0008;THETA=0.0004;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 87602287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9532;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87602288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0472;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 87602491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1001;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 87602575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87602765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0945;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87602862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6035;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87602920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3242;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0005;THETA=0.0006;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 87603033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0482;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0004;THETA=0.0009;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 87603132 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8596;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87603165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87603220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0098;AVGPOST=0.9982;RSQ=0.9196;ERATE=0.0006;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87603441 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0950;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87603483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87603501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8924;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87603565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6343;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87603665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87603685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1264;AVGPOST=0.9889;RSQ=0.9633;ERATE=0.0035;THETA=0.0008;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 87603886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9081;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87603896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0950;AVGPOST=0.9985;RSQ=0.9934;ERATE=0.0005;THETA=0.0008;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87603997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7066;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87604053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7825;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87604266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0765;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0010;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 87604271 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0185;AVGPOST=0.9996;RSQ=0.9910;ERATE=0.0003;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87604273 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0006;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87604658 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6953;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87604782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0266;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87604857 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9709;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87604921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87604924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87604937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7394;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87604961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9489;AVGPOST=0.9979;RSQ=0.9840;ERATE=0.0004;THETA=0.0005;AC=2074;AN=2184 GT:DS:GL:BD 0.94963372 1
1 87605047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0178;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87605226 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87605345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0274;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0008;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 87605346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6095;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87605524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9757;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87605624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9662;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87605669 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9259;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87605700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0200;AVGPOST=0.9990;RSQ=0.9810;ERATE=0.0003;THETA=0.0008;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87605703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7390;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87605772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9491;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=2073;AN=2184 GT:DS:GL:BD 0.94917583 1
1 87605980 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5452;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87605988 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.8959;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87606092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.948;LDAF=0.2367;AVGPOST=0.9676;RSQ=0.9335;ERATE=0.0012;THETA=0.0025;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 87606191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87606307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6993;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87606352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87606546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87606597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87606627 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5590;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0007;AC=1222;AN=2184 GT:DS:GL:BD 0.55952382 1
1 87606693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87606731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9552;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87606750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87606819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0096;AVGPOST=0.9993;RSQ=0.9722;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87606822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0046;AVGPOST=0.9978;RSQ=0.8208;ERATE=0.0008;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87607106 . T TA 71 PASS INDEL;BAVGPOST=0.992;BRSQ=0.468;LDAF=0.0197;AVGPOST=0.9737;RSQ=0.4361;ERATE=0.0049;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87607114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5407;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87607126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8567;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87607292 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5527;AVGPOST=0.9947;RSQ=0.9919;ERATE=0.0009;THETA=0.0005;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 87607300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7973;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87607406 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9173;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87607413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7896;ERATE=0.0003;THETA=0.0056;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87607599 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6151;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87607615 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0444;AVGPOST=0.9991;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 87607625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8481;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87607788 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87607965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87608064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5211;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87608235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8866;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87608282 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87608303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87608317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87608670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6369;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87608683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0313;AVGPOST=0.9934;RSQ=0.9111;ERATE=0.0005;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 87608868 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0151;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87608887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0155;AVGPOST=0.9988;RSQ=0.9708;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87608900 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0059;AVGPOST=0.9979;RSQ=0.8628;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87608943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87609004 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9525;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87609090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8069;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87609102 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7405;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87609114 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0225;AVGPOST=0.9991;RSQ=0.9823;ERATE=0.0005;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87609279 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0106;AVGPOST=0.9991;RSQ=0.9660;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87609305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5186;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87609418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6111;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87609452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0085;AVGPOST=0.9990;RSQ=0.9502;ERATE=0.0005;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87609624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9990;RSQ=0.9628;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87609747 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87609771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8262;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87609789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5814;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87609827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9997;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87609851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2490;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 87609922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87610012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87610074 . G GC 215 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6688;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87610194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87610196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9126;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87610243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2490;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 87610277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7872;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87610448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7916;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87610702 . TAA T 453 PASS INDEL;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9309;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87610842 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8012;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87610984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4468;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87611051 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0280;AVGPOST=0.9987;RSQ=0.9792;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 87611147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3406;ERATE=0.0004;THETA=0.0015;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87611244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5766;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87611311 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0201;AVGPOST=0.9997;RSQ=0.9935;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87611336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9731;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87611378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87611429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87611511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4109;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87611592 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6741;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 87611639 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87611753 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9663;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87611821 . ATT A 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8237;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87611823 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1704;AVGPOST=0.9976;RSQ=0.9935;ERATE=0.0004;THETA=0.0011;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 87611890 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0276;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 87611942 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87612289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8726;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87612353 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87612488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7174;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87612569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8460;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87612570 rs34976449 T TG 49477 PASS INDEL;BAVGPOST=0.986;BRSQ=0.973;LDAF=0.6991;AVGPOST=0.9715;RSQ=0.9563;ERATE=0.0052;THETA=0.0005;AC=1534;AN=2184 GT:DS:GL:BD 0.70238096 1
1 87612658 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87612832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6912;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87612874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87612886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0275;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0003;THETA=0.0006;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 87612904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2417;AVGPOST=0.9965;RSQ=0.9926;ERATE=0.0005;THETA=0.0003;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 87613012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9851;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87613024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9081;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87613063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8576;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87613600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87613735 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8941;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87613763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87613795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0205;AVGPOST=1.0000;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87614037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87614080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0104;AVGPOST=0.9978;RSQ=0.9068;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87614293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8769;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87614324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0033;AVGPOST=0.9967;RSQ=0.6539;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87614373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0222;AVGPOST=0.9990;RSQ=0.9815;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87614421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7013;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87614423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8350;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87614450 . ATATC A 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87614484 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87614608 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6350;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87614787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.956;LDAF=0.3230;AVGPOST=0.9901;RSQ=0.9818;ERATE=0.0008;THETA=0.0013;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 87614951 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.906;LDAF=0.9164;AVGPOST=0.9859;RSQ=0.9262;ERATE=0.0015;THETA=0.0002;AC=2010;AN=2184 GT:DS:GL:BD 0.92032969 1
1 87614958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.658;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5243;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87615116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5682;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87615244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.398;LDAF=0.0030;AVGPOST=0.9948;RSQ=0.3252;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87615334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.699;LDAF=0.0190;AVGPOST=0.9862;RSQ=0.7123;ERATE=0.0005;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87615344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.736;LDAF=0.0096;AVGPOST=0.9897;RSQ=0.5830;ERATE=0.0019;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87615371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.444;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.2278;ERATE=0.0011;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87615434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2672;AVGPOST=0.9959;RSQ=0.9917;ERATE=0.0006;THETA=0.0005;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 87615608 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.914;LDAF=0.0143;AVGPOST=0.9979;RSQ=0.9502;ERATE=0.0004;THETA=0.0018;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87615649 . C CA 588 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0086;AVGPOST=0.9979;RSQ=0.8919;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87615720 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2726;AVGPOST=0.9933;RSQ=0.9868;ERATE=0.0008;THETA=0.0080;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 87615750 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.9196;AVGPOST=0.9913;RSQ=0.9511;ERATE=0.0011;THETA=0.0034;AC=2012;AN=2184 GT:DS:GL:BD 0.92124540 1
1 87615914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0269;AVGPOST=0.9974;RSQ=0.9559;ERATE=0.0005;THETA=0.0069;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87615945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87616107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.974;LDAF=0.0709;AVGPOST=0.9888;RSQ=0.9450;ERATE=0.0011;THETA=0.0044;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 87616285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.958;LDAF=0.0702;AVGPOST=0.9886;RSQ=0.9389;ERATE=0.0014;THETA=0.0104;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 87616317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5485;ERATE=0.0005;THETA=0.0069;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87616406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0151;AVGPOST=0.9970;RSQ=0.9198;ERATE=0.0006;THETA=0.0086;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87616413 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6783;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87616618 . ATAG A 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6818;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87616628 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.899;LDAF=0.2263;AVGPOST=0.9596;RSQ=0.9147;ERATE=0.0167;THETA=0.0037;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 87616635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.947;LDAF=0.0206;AVGPOST=0.9966;RSQ=0.9344;ERATE=0.0015;THETA=0.0076;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87616654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.953;LDAF=0.2950;AVGPOST=0.9805;RSQ=0.9652;ERATE=0.0025;THETA=0.0030;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 87616808 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.957;LDAF=0.5610;AVGPOST=0.9542;RSQ=0.9271;ERATE=0.0051;THETA=0.0105;AC=1232;AN=2184 GT:DS:GL:BD 0.56410259 1
1 87617010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5172;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87617121 . C CA 1109 PASS INDEL;BAVGPOST=0.991;BRSQ=0.800;LDAF=0.0349;AVGPOST=0.9841;RSQ=0.8323;ERATE=0.0006;THETA=0.0016;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 87617238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.949;LDAF=0.1311;AVGPOST=0.9883;RSQ=0.9658;ERATE=0.0006;THETA=0.0046;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 87617305 . CATT C 361 PASS INDEL;BAVGPOST=0.998;BRSQ=0.761;LDAF=0.0048;AVGPOST=0.9966;RSQ=0.6885;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87617431 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.7860;AVGPOST=0.9799;RSQ=0.9628;ERATE=0.0007;THETA=0.0011;AC=1725;AN=2184 GT:DS:GL:BD 0.78983516 1
1 87617450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9139;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87617452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6600;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87617473 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0141;AVGPOST=0.9977;RSQ=0.9247;ERATE=0.0004;THETA=0.0014;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87617578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87617981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87617985 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9529;ERATE=0.0003;THETA=0.0026;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87618041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8797;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87618074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8945;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87618120 rs34180993 A AC 48662 PASS INDEL;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4965;AVGPOST=0.9848;RSQ=0.9823;ERATE=0.0004;THETA=0.0008;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 87618295 . C CA 15239 PASS INDEL;BAVGPOST=0.972;BRSQ=0.958;LDAF=0.4881;AVGPOST=0.9646;RSQ=0.9586;ERATE=0.0049;THETA=0.0014;AC=1079;AN=2184 GT:DS:GL:BD 0.49404761 0
1 87618296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6695;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87618321 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.802;LDAF=0.0073;AVGPOST=0.9964;RSQ=0.7942;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87618347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87618463 . A AGT 139 PASS INDEL;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6954;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87618484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7308;ERATE=0.0013;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87618505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87618516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87618523 rs70979755 C CT 1485 PASS INDEL;BAVGPOST=0.556;BRSQ=0.140;LDAF=0.6207;AVGPOST=0.6521;RSQ=0.3745;ERATE=0.0284;THETA=0.0011;AC=1463;AN=2184 GT:DS:GL:BD 0.66987181 1
1 87618590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.3373;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87618724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.948;LDAF=0.1846;AVGPOST=0.9842;RSQ=0.9683;ERATE=0.0006;THETA=0.0003;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 87618755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.942;LDAF=0.1586;AVGPOST=0.9845;RSQ=0.9654;ERATE=0.0005;THETA=0.0008;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 87618756 . AAT A 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87618764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5628;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87618800 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9079;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87618813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0027;AVGPOST=0.9970;RSQ=0.5353;ERATE=0.0010;THETA=0.0070;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87618856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9985;RSQ=0.9820;ERATE=0.0003;THETA=0.0009;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 87618870 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5025;AVGPOST=0.9952;RSQ=0.9938;ERATE=0.0008;THETA=0.0004;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 87618914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87618940 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87618979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8435;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87618985 rs71580091 C CAG 42236 PASS INDEL;BAVGPOST=0.953;BRSQ=0.931;LDAF=0.4812;AVGPOST=0.9687;RSQ=0.9627;ERATE=0.0010;THETA=0.0007;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 87619119 . G GAT 15939 PASS INDEL;BAVGPOST=0.948;BRSQ=0.921;LDAF=0.4587;AVGPOST=0.9463;RSQ=0.9336;ERATE=0.0040;THETA=0.0006;AC=1031;AN=2184 GT:DS:GL:BD 0.47206959 0
1 87619121 . GCA G 110 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7079;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87619154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.868;LDAF=0.0242;AVGPOST=0.9943;RSQ=0.8997;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87619244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87619323 . G GAGC 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87619377 . TG T 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87619430 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0032;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87619435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8676;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87619488 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87619566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1180;AVGPOST=0.9949;RSQ=0.9836;ERATE=0.0005;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 87619584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0661;AVGPOST=0.9964;RSQ=0.9781;ERATE=0.0003;THETA=0.0006;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 87619588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6681;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87619596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0401;AVGPOST=0.9991;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 87619617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5570;ERATE=0.0009;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87619672 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87619765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87619776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0297;AVGPOST=0.9967;RSQ=0.9579;ERATE=0.0004;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87619827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3223;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=704;AN=2184 GT:DS:GL:BD 0.32234433 0
1 87619876 rs112766521 GCTTCTCCCTC G 55090 PASS INDEL;BAVGPOST=0.970;BRSQ=0.939;LDAF=0.3405;AVGPOST=0.9902;RSQ=0.9820;ERATE=0.0010;THETA=0.0003;AC=750;AN=2184 GT:DS:GL:BD 0.34340659 0
1 87619913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87619947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4074;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87619956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87620127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0044;AVGPOST=0.9967;RSQ=0.7087;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87620129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87620136 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87620211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0308;AVGPOST=0.9944;RSQ=0.9378;ERATE=0.0006;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87620329 rs33963510 CAAA C 92 PASS INDEL;BAVGPOST=0.880;BRSQ=0.134;LDAF=0.1502;AVGPOST=0.7776;RSQ=0.2812;ERATE=0.0175;THETA=0.0002;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 87620406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.930;LDAF=0.2769;AVGPOST=0.9770;RSQ=0.9577;ERATE=0.0030;THETA=0.0015;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 87620449 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.555;LDAF=0.0083;AVGPOST=0.9913;RSQ=0.6099;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87620465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.584;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7889;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87620509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9794;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87620656 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87620674 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9764;AVGPOST=0.9983;RSQ=0.9768;ERATE=0.0004;THETA=0.0002;AC=2132;AN=2184 GT:DS:GL:BD 0.97619045 1
1 87620688 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6750;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87620717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5802;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87620763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87620777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7277;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87620778 . C CT 273 PASS INDEL;BAVGPOST=0.992;BRSQ=0.683;LDAF=0.0148;AVGPOST=0.9865;RSQ=0.6471;ERATE=0.0019;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87620984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2265;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 87621020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9498;ERATE=0.0005;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87621030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0095;AVGPOST=0.9982;RSQ=0.9184;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87621047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7662;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87621049 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0070;AVGPOST=0.9987;RSQ=0.9186;ERATE=0.0004;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87621134 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87621243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87621351 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87621400 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6912;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=1510;AN=2184 GT:DS:GL:BD 0.69139194 1
1 87621405 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9480;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87621695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8115;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87621955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6917;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0007;AC=1512;AN=2184 GT:DS:GL:BD 0.69230771 1
1 87621991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87622055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87622079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6686;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87622184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0231;AVGPOST=0.9977;RSQ=0.9632;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 87622198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5342;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87622361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0317;AVGPOST=0.9980;RSQ=0.9794;ERATE=0.0005;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 87622377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.6867;AVGPOST=0.9966;RSQ=0.9947;ERATE=0.0007;THETA=0.0003;AC=1502;AN=2184 GT:DS:GL:BD 0.68772894 1
1 87622444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8720;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87622531 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0166;AVGPOST=0.9975;RSQ=0.9443;ERATE=0.0006;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87622647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87622682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6922;AVGPOST=0.9966;RSQ=0.9947;ERATE=0.0006;THETA=0.0003;AC=1511;AN=2184 GT:DS:GL:BD 0.69184983 1
1 87622700 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2281;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 87622721 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8251;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87622805 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5498;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87622815 . T TC 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5019;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87622988 rs36096559 A AG 15039 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1443;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 87622990 . C CA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6010;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87623028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0028;AVGPOST=0.9980;RSQ=0.7232;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87623183 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6829;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87623243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2286;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 87623250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9248;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87623272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8276;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87623360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0323;AVGPOST=0.9993;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 87623407 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6914;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0007;THETA=0.0004;AC=1512;AN=2184 GT:DS:GL:BD 0.69230771 1
1 87623488 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87623531 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0564;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 87623567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3446;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0010;THETA=0.0004;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 87623575 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87623578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.552;LDAF=0.0047;AVGPOST=0.9974;RSQ=0.7610;ERATE=0.0006;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87623596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.566;LDAF=0.0043;AVGPOST=0.9943;RSQ=0.4991;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87623688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.956;LDAF=0.6745;AVGPOST=0.9729;RSQ=0.9564;ERATE=0.0040;THETA=0.0003;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 87623807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87624010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87624026 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.880;LDAF=0.6226;AVGPOST=0.9187;RSQ=0.8770;ERATE=0.0193;THETA=0.0004;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 87624122 . A AT 37713 PASS INDEL;BAVGPOST=0.877;BRSQ=0.515;LDAF=0.8608;AVGPOST=0.8915;RSQ=0.6619;ERATE=0.0128;THETA=0.0007;AC=1907;AN=2184 GT:DS:GL:BD 0.87316847 1
1 87624124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1292;AVGPOST=0.9964;RSQ=0.9883;ERATE=0.0005;THETA=0.0010;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 87624140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9771;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 87624271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8097;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87624275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87624317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2263;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 87624325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7079;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87624426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0042;AVGPOST=0.9955;RSQ=0.5822;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87624486 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9771;AVGPOST=0.9997;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 87624582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8439;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87624733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.9024;ERATE=0.0008;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87624813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.943;LDAF=0.0436;AVGPOST=0.9891;RSQ=0.9043;ERATE=0.0005;THETA=0.0009;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 87624836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9827;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87625081 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5863;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0052;AC=1281;AN=2184 GT:DS:GL:BD 0.58653843 1
1 87625154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0077;AVGPOST=0.9999;RSQ=0.9926;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87625200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6247;AVGPOST=0.9966;RSQ=0.9949;ERATE=0.0006;THETA=0.0009;AC=1365;AN=2184 GT:DS:GL:BD 0.62500000 1
1 87625248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9048;ERATE=0.0006;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87625256 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87625322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5875;AVGPOST=0.9968;RSQ=0.9955;ERATE=0.0005;THETA=0.0193;AC=1283;AN=2184 GT:DS:GL:BD 0.58745420 1
1 87625356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0093;AVGPOST=0.9985;RSQ=0.9341;ERATE=0.0004;THETA=0.0113;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87626068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6733;ERATE=0.0006;THETA=0.0098;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87626120 rs59913159 T TG 98162 PASS INDEL;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.7718;AVGPOST=0.9873;RSQ=0.9758;ERATE=0.0009;THETA=0.0003;AC=1687;AN=2184 GT:DS:GL:BD 0.77243590 1
1 87626313 . G GT 34113 PASS INDEL;BAVGPOST=0.970;BRSQ=0.932;LDAF=0.7601;AVGPOST=0.9713;RSQ=0.9481;ERATE=0.0019;THETA=0.0115;AC=1673;AN=2184 GT:DS:GL:BD 0.76602566 1
1 87626314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7956;ERATE=0.0004;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87626363 rs57536124 CT C 144 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8405;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87626374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7474;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87626576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6879;ERATE=0.0003;THETA=0.0054;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87626855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.806;LDAF=0.0081;AVGPOST=0.9972;RSQ=0.8493;ERATE=0.0003;THETA=0.0107;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87626897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0030;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87626912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.5351;AVGPOST=0.9903;RSQ=0.9867;ERATE=0.0014;THETA=0.0003;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 87626947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0168;AVGPOST=0.9985;RSQ=0.9681;ERATE=0.0004;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87627004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9359;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87627021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0165;AVGPOST=0.9988;RSQ=0.9727;ERATE=0.0003;THETA=0.0010;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87627047 . ATGG A 174 PASS INDEL;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.7986;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87627144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87627196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0511;AVGPOST=0.9992;RSQ=0.9934;ERATE=0.0003;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 87627247 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6473;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87627311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87627339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9849;ERATE=0.0003;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87627356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6081;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87627497 . C CA 861 PASS INDEL;BAVGPOST=0.952;BRSQ=0.552;LDAF=0.0836;AVGPOST=0.9056;RSQ=0.4980;ERATE=0.0227;THETA=0.0005;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 87627764 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5857;AVGPOST=0.9910;RSQ=0.9860;ERATE=0.0025;THETA=0.0011;AC=1279;AN=2184 GT:DS:GL:BD 0.58562273 1
1 87627772 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5400;AVGPOST=0.9977;RSQ=0.9966;ERATE=0.0004;THETA=0.0008;AC=1179;AN=2184 GT:DS:GL:BD 0.53983516 1
1 87627806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0111;AVGPOST=0.9987;RSQ=0.9601;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87627974 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0005;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87627978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8589;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87627985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5874;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0005;THETA=0.0011;AC=1284;AN=2184 GT:DS:GL:BD 0.58791208 1
1 87628057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87628081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0177;AVGPOST=0.9994;RSQ=0.9880;ERATE=0.0003;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87628099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87628112 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87628119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87628125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7142;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87628272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5392;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0005;THETA=0.0003;AC=1178;AN=2184 GT:DS:GL:BD 0.53937727 1
1 87628277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.543;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4147;ERATE=0.0010;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87628306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6267;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87628455 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5919;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0008;THETA=0.0003;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 87628621 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87628642 . C CCAT 7259 PASS INDEL;BAVGPOST=0.979;BRSQ=0.745;LDAF=0.0423;AVGPOST=0.9763;RSQ=0.7743;ERATE=0.0007;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 87628704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8940;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87628815 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5931;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0005;THETA=0.0006;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 87628847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4843;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87628959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8043;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87629010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0113;AVGPOST=0.9969;RSQ=0.8935;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87629012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8224;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87629033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5926;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 87629034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7058;ERATE=0.0004;THETA=0.0072;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87629102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87629297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87629441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0058;AVGPOST=0.9975;RSQ=0.8396;ERATE=0.0006;THETA=0.0035;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87629702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.8986;ERATE=0.0004;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87629800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.9183;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87629955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9276;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87630025 . A AT 173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0052;AVGPOST=0.9957;RSQ=0.6794;ERATE=0.0010;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87630030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87630088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0073;AVGPOST=0.9983;RSQ=0.9138;ERATE=0.0003;THETA=0.0022;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87630190 . G GT 4414 PASS INDEL;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0263;AVGPOST=0.9975;RSQ=0.9651;ERATE=0.0007;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87630303 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87630324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9996;RSQ=0.9867;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87630358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5591;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87630369 . CA C 104 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87630483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9427;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87630548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87630568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1862;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0007;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 87630886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87630898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0362;AVGPOST=0.9991;RSQ=0.9896;ERATE=0.0003;THETA=0.0013;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 87630922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87630945 . G GGGTA 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87630989 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87631117 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87631249 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6951;ERATE=0.0006;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87631315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9997;RSQ=0.9347;ERATE=0.0003;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87631412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87631560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6626;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87631658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.534;LDAF=0.0125;AVGPOST=0.9862;RSQ=0.5578;ERATE=0.0049;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87631659 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0257;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87631665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1856;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0004;THETA=0.0022;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 87631845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87631890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0132;AVGPOST=0.9988;RSQ=0.9595;ERATE=0.0003;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87631933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0128;AVGPOST=0.9995;RSQ=0.9798;ERATE=0.0004;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87631941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1887;AVGPOST=0.9929;RSQ=0.9848;ERATE=0.0012;THETA=0.0010;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 87631964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9853;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87632041 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9995;RSQ=0.9363;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87632092 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0067;AVGPOST=0.9976;RSQ=0.8431;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87632107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0131;AVGPOST=0.9995;RSQ=0.9808;ERATE=0.0003;THETA=0.0013;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87632184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0108;AVGPOST=0.9993;RSQ=0.9731;ERATE=0.0003;THETA=0.0012;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87632262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0003;THETA=0.0014;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87632308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9593;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87632309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4876;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87632366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.652;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87632372 . CA C 2199 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0207;AVGPOST=0.9980;RSQ=0.9564;ERATE=0.0007;THETA=0.0007;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87632385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6623;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87632460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87632466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87632478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0071;AVGPOST=0.9985;RSQ=0.9080;ERATE=0.0005;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87632536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87632679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0004;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87632762 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0012;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87632831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0120;AVGPOST=0.9950;RSQ=0.8230;ERATE=0.0007;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87633125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5440;ERATE=0.0007;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87633128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4552;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87633229 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87633296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0041;AVGPOST=0.9988;RSQ=0.8779;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87633488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87633509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9898;ERATE=0.0003;THETA=0.0024;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87633550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8362;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87633644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0004;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87633650 . C CCTGA 4811 PASS INDEL;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0188;AVGPOST=0.9986;RSQ=0.9695;ERATE=0.0003;THETA=0.0013;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87633703 . AC A 4448 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0196;AVGPOST=0.9988;RSQ=0.9761;ERATE=0.0009;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87633707 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1902;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0005;THETA=0.0018;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 87633869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1390;AVGPOST=0.9979;RSQ=0.9939;ERATE=0.0003;THETA=0.0008;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 87634088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87634130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87634143 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9395;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87634287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87634407 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87634446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7342;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87634471 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87634472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9998;RSQ=0.9793;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87634494 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0179;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87634518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.6515;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87634538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87634619 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0149;AVGPOST=0.9974;RSQ=0.9323;ERATE=0.0006;THETA=0.0013;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87634702 . AGTG A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87634774 . GTGGT G 158 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87634775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1274;AVGPOST=0.9963;RSQ=0.9861;ERATE=0.0008;THETA=0.0007;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 87634825 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8405;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87634843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0180;AVGPOST=0.9994;RSQ=0.9843;ERATE=0.0004;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87634863 . C CT 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7905;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87634870 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0130;AVGPOST=0.9986;RSQ=0.9560;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87634917 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87635027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1246;AVGPOST=0.9980;RSQ=0.9930;ERATE=0.0005;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 87635156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6907;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87635157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8204;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87635189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5578;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87635303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8675;ERATE=0.0004;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87635377 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87635421 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7426;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 87635496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87635581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1182;AVGPOST=0.9965;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 87635652 . CT C 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87635727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87635824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9578;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87635925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7833;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87636039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87636040 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7519;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1641;AN=2184 GT:DS:GL:BD 0.75137365 1
1 87636069 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3866;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87636193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87636336 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87636337 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87636339 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87636396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87636439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9163;AVGPOST=0.9983;RSQ=0.9923;ERATE=0.0003;THETA=0.0002;AC=2002;AN=2184 GT:DS:GL:BD 0.91666669 1
1 87636452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87636555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1190;AVGPOST=0.9985;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 87636742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7348;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 87636869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87636875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0370;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87636876 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8756;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 87637001 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1239;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 87637014 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87637194 . GCTA G 115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4978;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87637277 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0063;AVGPOST=0.9980;RSQ=0.8735;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87637281 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4426;AVGPOST=0.9920;RSQ=0.9890;ERATE=0.0029;THETA=0.0035;AC=963;AN=2184 GT:DS:GL:BD 0.44093406 0
1 87637320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4428;AVGPOST=0.9954;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 87637425 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9168;AVGPOST=0.9991;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=2002;AN=2184 GT:DS:GL:BD 0.91666669 1
1 87637533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8793;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87637601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87637670 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87637840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0338;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 87637848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0072;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87637870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87637940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0111;AVGPOST=0.9982;RSQ=0.9410;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87637974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87637993 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87638007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87638040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1243;AVGPOST=0.9978;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 87638068 . T TC 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5943;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87638073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7246;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87638164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0338;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 87638169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.8093;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87638172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87638173 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0294;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87638215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87638347 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87638397 . TG T 403 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0128;AVGPOST=0.9976;RSQ=0.9293;ERATE=0.0004;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87638426 rs112708653 G GT 680 PASS INDEL;BAVGPOST=0.943;BRSQ=0.570;LDAF=0.1049;AVGPOST=0.8936;RSQ=0.5284;ERATE=0.0374;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 87638427 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0051;AVGPOST=0.9975;RSQ=0.8042;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87638443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8520;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87638523 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6840;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87638619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87638642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1273;AVGPOST=0.9979;RSQ=0.9930;ERATE=0.0005;THETA=0.0003;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 87638691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87638990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7236;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87639000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.8802;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87639002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8548;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87639095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87639188 . AGC A 38 PASS INDEL;BAVGPOST=0.994;BRSQ=0.468;LDAF=0.0065;AVGPOST=0.9935;RSQ=0.6182;ERATE=0.0006;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87639211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87639243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87639251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5886;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87639253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87639264 . A AGG 297 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87639309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7751;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87639329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7377;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=1610;AN=2184 GT:DS:GL:BD 0.73717946 1
1 87639344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87639363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7503;AVGPOST=0.9976;RSQ=0.9950;ERATE=0.0006;THETA=0.0009;AC=1636;AN=2184 GT:DS:GL:BD 0.74908423 1
1 87639394 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.8894;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87639423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0889;AVGPOST=0.9983;RSQ=0.9916;ERATE=0.0004;THETA=0.0005;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 87639437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.9270;AVGPOST=0.9973;RSQ=0.9864;ERATE=0.0005;THETA=0.0003;AC=2024;AN=2184 GT:DS:GL:BD 0.92673993 1
1 87639487 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5755;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87639649 rs59023422 A AGGCATGAGT 116729 PASS INDEL;BAVGPOST=0.957;BRSQ=0.926;LDAF=0.5899;AVGPOST=0.9427;RSQ=0.9152;ERATE=0.0101;THETA=0.0002;AC=1312;AN=2184 GT:DS:GL:BD 0.60073262 1
1 87639751 . T TC 302 PASS INDEL;BAVGPOST=0.989;BRSQ=0.643;LDAF=0.0293;AVGPOST=0.9649;RSQ=0.5020;ERATE=0.0093;THETA=0.0015;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87639811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.608;LDAF=0.0096;AVGPOST=0.9927;RSQ=0.6867;ERATE=0.0013;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87639867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7693;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87640125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87640306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8759;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87640339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6971;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87640360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.3114;AVGPOST=0.9932;RSQ=0.9891;ERATE=0.0008;THETA=0.0026;AC=676;AN=2184 GT:DS:GL:BD 0.30952382 0
1 87640558 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4625;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87640627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87640699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8221;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87640728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87640802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9673;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87640834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87641080 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9974;RSQ=0.8987;ERATE=0.0004;THETA=0.0022;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87641300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3959;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87641316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8631;ERATE=0.0006;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87641355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0062;AVGPOST=0.9990;RSQ=0.9325;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87641436 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.1974;AVGPOST=0.9950;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 87641478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0174;AVGPOST=0.9984;RSQ=0.9638;ERATE=0.0004;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87641492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87641519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87641548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8696;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87641562 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87641640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87641701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8686;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87641704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7323;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87641721 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87641781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7406;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87641850 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8321;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87641968 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8038;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87642055 . GTTGTTTT G 303 PASS INDEL;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0045;AVGPOST=0.9954;RSQ=0.5601;ERATE=0.0021;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87642068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8434;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87642079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9980;RSQ=0.9329;ERATE=0.0005;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87642229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0109;AVGPOST=0.9980;RSQ=0.9159;ERATE=0.0006;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87642236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87642294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.991;LDAF=0.5577;AVGPOST=0.9915;RSQ=0.9895;ERATE=0.0008;THETA=0.0004;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 87642305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4651;ERATE=0.0006;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87642361 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6533;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87642373 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.5019;AVGPOST=0.9936;RSQ=0.9918;ERATE=0.0009;THETA=0.0008;AC=1094;AN=2184 GT:DS:GL:BD 0.50091577 1
1 87642479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87642663 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.6124;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87642688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.584;LDAF=0.0175;AVGPOST=0.9790;RSQ=0.5323;ERATE=0.0033;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87642765 . T TTG 209 PASS INDEL;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0096;AVGPOST=0.9957;RSQ=0.8255;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87642785 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.777;LDAF=0.0200;AVGPOST=0.9865;RSQ=0.7140;ERATE=0.0014;THETA=0.0015;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87642841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.730;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7187;ERATE=0.0005;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87642858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0039;AVGPOST=0.9969;RSQ=0.7063;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87642871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5740;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87643055 . GGT G 44 PASS INDEL;BAVGPOST=0.985;BRSQ=0.623;LDAF=0.0574;AVGPOST=0.9182;RSQ=0.3951;ERATE=0.0152;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87643160 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0042;AVGPOST=0.9988;RSQ=0.8831;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87643162 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87643213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87643285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0605;AVGPOST=0.9983;RSQ=0.9890;ERATE=0.0004;THETA=0.0007;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 87643298 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5742;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87643363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0697;AVGPOST=0.9986;RSQ=0.9922;ERATE=0.0004;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 87643449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5198;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87643494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7751;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87643519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87643565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87643604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0157;AVGPOST=0.9982;RSQ=0.9537;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87643670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9135;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87643786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8332;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87643983 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1004;AVGPOST=0.9942;RSQ=0.9801;ERATE=0.0004;THETA=0.0006;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 87644000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4828;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87644063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9713;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87644085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87644132 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.710;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87644177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7478;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87644300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0070;AVGPOST=0.9987;RSQ=0.9100;ERATE=0.0004;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87644388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6133;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87644432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8686;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87644743 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.953;LDAF=0.1853;AVGPOST=0.9804;RSQ=0.9514;ERATE=0.0014;THETA=0.0032;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 87644848 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87644914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87645091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87645101 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87645164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87645199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87645208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6424;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87645278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9451;ERATE=0.0003;THETA=0.0021;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87645280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6440;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87645286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4968;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87645289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7401;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87645307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9914;ERATE=0.0003;THETA=0.0046;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87645344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9473;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87645528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0262;AVGPOST=0.9995;RSQ=0.9914;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87645613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0265;AVGPOST=0.9991;RSQ=0.9858;ERATE=0.0004;THETA=0.0009;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87645671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87646110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87646152 . GC G 7 PASS INDEL;BAVGPOST=0.987;BRSQ=0.117;LDAF=0.0344;AVGPOST=0.9392;RSQ=0.2920;ERATE=0.0028;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87646196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87646314 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87646326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87646344 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87646473 . C CAG 181 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5626;ERATE=0.0006;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87646647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87646780 . GGTA G 6658 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0306;AVGPOST=0.9979;RSQ=0.9770;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87646857 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87646923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0060;AVGPOST=0.9979;RSQ=0.8682;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87646936 . A AT 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0031;AVGPOST=0.9947;RSQ=0.3748;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87647138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9531;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87647177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87647179 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9395;AVGPOST=0.9973;RSQ=0.9820;ERATE=0.0004;THETA=0.0009;AC=2052;AN=2184 GT:DS:GL:BD 0.93956041 1
1 87647308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0114;AVGPOST=0.9988;RSQ=0.9548;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87647364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0265;AVGPOST=0.9987;RSQ=0.9821;ERATE=0.0003;THETA=0.0012;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87647414 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7740;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87647480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.6167;AVGPOST=0.9929;RSQ=0.9894;ERATE=0.0006;THETA=0.0005;AC=1346;AN=2184 GT:DS:GL:BD 0.61630034 1
1 87647501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87647585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.183;LDAF=0.0055;AVGPOST=0.9913;RSQ=0.3674;ERATE=0.0011;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87647854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.9380;AVGPOST=0.9956;RSQ=0.9702;ERATE=0.0006;THETA=0.0007;AC=2049;AN=2184 GT:DS:GL:BD 0.93818682 1
1 87648028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.687;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7036;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87648112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4030;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87648170 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3871;ERATE=0.0009;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87648224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0071;AVGPOST=0.9966;RSQ=0.8085;ERATE=0.0007;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87648247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.6651;AVGPOST=0.9837;RSQ=0.9721;ERATE=0.0018;THETA=0.0012;AC=1458;AN=2184 GT:DS:GL:BD 0.66758239 1
1 87648352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5404;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87648421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9105;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87648557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0225;AVGPOST=0.9996;RSQ=0.9919;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87648599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6517;ERATE=0.0005;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87648610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.883;LDAF=0.0143;AVGPOST=0.9966;RSQ=0.9022;ERATE=0.0005;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87648777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7732;ERATE=0.0005;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87648840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.723;LDAF=0.0037;AVGPOST=0.9976;RSQ=0.7294;ERATE=0.0005;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87648841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0009;AVGPOST=0.9984;RSQ=0.2773;ERATE=0.0004;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87649063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87649064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5335;ERATE=0.0005;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87649097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0234;AVGPOST=0.9995;RSQ=0.9887;ERATE=0.0004;THETA=0.0025;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 87649319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9742;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87649635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0124;AVGPOST=0.9967;RSQ=0.8998;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87649716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6470;ERATE=0.0004;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87649731 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0596;AVGPOST=0.9983;RSQ=0.9889;ERATE=0.0006;THETA=0.0032;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 87649844 . C CA 2457 PASS INDEL;BAVGPOST=0.631;BRSQ=0.222;LDAF=0.6750;AVGPOST=0.6793;RSQ=0.4071;ERATE=0.0236;THETA=0.0008;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 87650098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9117;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87650168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9806;ERATE=0.0009;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87650199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9856;ERATE=0.0004;THETA=0.0038;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87650200 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87650318 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87650323 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87650365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0969;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0003;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87650441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87650498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0338;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 87650528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3605;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0005;THETA=0.0011;AC=787;AN=2184 GT:DS:GL:BD 0.36034799 0
1 87650529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87650583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0143;AVGPOST=0.9995;RSQ=0.9853;ERATE=0.0005;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87650611 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0043;AVGPOST=0.9980;RSQ=0.7924;ERATE=0.0006;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87650639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9505;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87650735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0167;AVGPOST=0.9988;RSQ=0.9696;ERATE=0.0004;THETA=0.0013;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87650788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4935;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0006;THETA=0.0007;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 87650901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4930;AVGPOST=0.9966;RSQ=0.9944;ERATE=0.0009;THETA=0.0010;AC=1078;AN=2184 GT:DS:GL:BD 0.49358973 0
1 87651058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0524;AVGPOST=0.9988;RSQ=0.9917;ERATE=0.0004;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 87651064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87651120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.4484;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87651308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.722;LDAF=0.0060;AVGPOST=0.9968;RSQ=0.7597;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87651324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9358;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87651388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0085;AVGPOST=0.9970;RSQ=0.8507;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87651497 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7907;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87651597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87651686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87651694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0556;AVGPOST=0.9990;RSQ=0.9911;ERATE=0.0004;THETA=0.0005;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 87651771 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0028;AVGPOST=0.9954;RSQ=0.3079;ERATE=0.0010;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87651832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4197;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 87651907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4186;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 87651984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.0904;AVGPOST=0.9950;RSQ=0.9772;ERATE=0.0004;THETA=0.0008;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 87652021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7745;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87652045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9214;ERATE=0.0006;THETA=0.0037;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87652080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87652097 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4573;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87652153 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87652157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9258;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87652164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0658;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 87652165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5057;AVGPOST=0.9994;RSQ=0.9993;ERATE=0.0004;THETA=0.0005;AC=1105;AN=2184 GT:DS:GL:BD 0.50595236 1
1 87652201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87652214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0017;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87652276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4214;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0003;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 87652336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87652356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87652400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87652430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87652516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87652578 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87652592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0897;AVGPOST=0.9986;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 87652620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0123;AVGPOST=0.9991;RSQ=0.9725;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87652640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0665;AVGPOST=0.9986;RSQ=0.9921;ERATE=0.0004;THETA=0.0030;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 87652646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6340;AVGPOST=0.9926;RSQ=0.9881;ERATE=0.0014;THETA=0.0010;AC=1387;AN=2184 GT:DS:GL:BD 0.63507324 1
1 87652651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0803;AVGPOST=0.9988;RSQ=0.9932;ERATE=0.0004;THETA=0.0006;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 87652664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0979;AVGPOST=0.9982;RSQ=0.9919;ERATE=0.0005;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 87652667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6577;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87652745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0005;THETA=0.0061;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87652786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87652811 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0164;AVGPOST=0.9991;RSQ=0.9790;ERATE=0.0004;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87652855 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87652920 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0056;AVGPOST=0.9975;RSQ=0.8363;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87652982 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9462;ERATE=0.0004;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87652994 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0751;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0004;THETA=0.0009;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 87652996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8609;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87653073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4890;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87653074 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87653076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4073;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87653144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87653192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87653214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9521;ERATE=0.0004;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87653283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9205;AVGPOST=0.9987;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=2010;AN=2184 GT:DS:GL:BD 0.92032969 1
1 87653449 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87653512 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87653685 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.9282;AVGPOST=0.9976;RSQ=0.9864;ERATE=0.0005;THETA=0.0007;AC=2027;AN=2184 GT:DS:GL:BD 0.92811358 1
1 87653688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0066;AVGPOST=0.9945;RSQ=0.6707;ERATE=0.0015;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87653947 MERGED_DEL_2_2041 CCTGGGTGACAGAGCAAGACTGTATCAAAAAAAAAAAAAAAGAAAGAAAAAGAAAAAACAACAACAAAAAACACCCAAATCACTCAGAATGAAGAGAATTGGAGAAAAAGTCACACTCAGCACCAGGCTTTGGCCCCACCTGCCTCTCCAGCACCATTGTAGGCCACTCTCGCTGTCCCTTACCCAGCCC C . . SV;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3531;AVGPOST=0.9898;RSQ=0.9824;ERATE=0.0005;THETA=0.0045;CIEND=-178;192;CIPOS=-156;215;END=17677665;HOMLEN=12;HOMSEQ=CTGGGTGACAGA;SOURCE=CNVnator_17676151 GT:DS:GL:BD 0.35393772 0
1 87653971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.563;LDAF=0.0136;AVGPOST=0.9816;RSQ=0.4885;ERATE=0.0017;THETA=0.0084;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87653984 . T TC 2921 PASS INDEL;BAVGPOST=0.916;BRSQ=0.603;LDAF=0.1017;AVGPOST=0.9191;RSQ=0.6768;ERATE=0.0031;THETA=0.0053;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 87653995 . AAG A 1036 PASS INDEL;BAVGPOST=0.810;BRSQ=0.389;LDAF=0.1901;AVGPOST=0.7786;RSQ=0.4344;ERATE=0.0372;THETA=0.0016;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 87654010 . GAA G 166 PASS INDEL;BAVGPOST=0.984;BRSQ=0.459;LDAF=0.0344;AVGPOST=0.9491;RSQ=0.3860;ERATE=0.0051;THETA=0.0034;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87654016 . AC A 7559 PASS INDEL;BAVGPOST=0.929;BRSQ=0.837;LDAF=0.2385;AVGPOST=0.9317;RSQ=0.8810;ERATE=0.0059;THETA=0.0011;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 87654034 rs34677561 GTC G 13003 PASS INDEL;BAVGPOST=0.994;BRSQ=0.972;LDAF=0.0787;AVGPOST=0.9925;RSQ=0.9665;ERATE=0.0007;THETA=0.0014;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 87654080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.873;LDAF=0.2180;AVGPOST=0.9544;RSQ=0.9181;ERATE=0.0006;THETA=0.0009;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 87654142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0076;AVGPOST=0.9968;RSQ=0.8202;ERATE=0.0005;THETA=0.0027;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87654147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4759;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87654217 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0094;AVGPOST=0.9943;RSQ=0.7760;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87654278 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.884;LDAF=0.2571;AVGPOST=0.9562;RSQ=0.9296;ERATE=0.0006;THETA=0.0006;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 87654429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.386;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3381;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87654486 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.872;LDAF=0.2393;AVGPOST=0.9538;RSQ=0.9215;ERATE=0.0012;THETA=0.0006;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 87654539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0073;AVGPOST=0.9890;RSQ=0.3892;ERATE=0.0012;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87654540 MERGED_DEL_2_2044 C ADELA . . SV;BAVGPOST=0.946;BRSQ=0.901;LDAF=0.3973;AVGPOST=0.8952;RSQ=0.8439;ERATE=0.0213;THETA=0.0060;CIEND=-17;33;CIPOS=-18;19;END=17677036;SOURCE=GenomeStrip_17676773_17677036;SVTYPE=DEL;AC=846;AN= GT:DS:GL:BD 0.38736263 0
1 87654572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.853;LDAF=0.1582;AVGPOST=0.9562;RSQ=0.9051;ERATE=0.0006;THETA=0.0009;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 87654573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.872;LDAF=0.2177;AVGPOST=0.9539;RSQ=0.9170;ERATE=0.0010;THETA=0.0046;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 87654633 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.3937;ERATE=0.0006;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87654663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3523;ERATE=0.0006;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87654694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8755;ERATE=0.0005;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87654706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0236;AVGPOST=0.9958;RSQ=0.9400;ERATE=0.0005;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87654768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5550;ERATE=0.0011;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87654838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0236;AVGPOST=0.9957;RSQ=0.9394;ERATE=0.0005;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87654839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3828;ERATE=0.0005;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87654842 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.718;LDAF=0.0108;AVGPOST=0.9956;RSQ=0.8208;ERATE=0.0006;THETA=0.0023;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87654845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.886;LDAF=0.2670;AVGPOST=0.9436;RSQ=0.9131;ERATE=0.0007;THETA=0.0064;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 87654868 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0293;AVGPOST=0.9831;RSQ=0.7597;ERATE=0.0007;THETA=0.0117;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87654961 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.0387;AVGPOST=0.9952;RSQ=0.9559;ERATE=0.0004;THETA=0.0051;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 87654995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.500;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4161;ERATE=0.0004;THETA=0.0058;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87655041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.0390;AVGPOST=0.9951;RSQ=0.9547;ERATE=0.0006;THETA=0.0153;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87655069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0227;AVGPOST=0.9970;RSQ=0.9537;ERATE=0.0007;THETA=0.0080;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87655111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0124;AVGPOST=0.9952;RSQ=0.8555;ERATE=0.0005;THETA=0.0084;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87655148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0235;AVGPOST=0.9945;RSQ=0.9307;ERATE=0.0004;THETA=0.0038;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87655161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9528;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87655330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9701;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87655420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5561;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87655452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87655458 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0082;AVGPOST=0.9997;RSQ=0.9839;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87655478 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4699;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87655513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9994;RSQ=0.9629;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87655618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87655772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87655780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87655781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87655881 . G GA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7379;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87656033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87656075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0034;AVGPOST=0.9972;RSQ=0.7159;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87656127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0610;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0009;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 87656240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0199;AVGPOST=0.9996;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87656341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87656429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87656517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6628;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0024;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 87656522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87656690 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6626;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0004;THETA=0.0006;AC=1447;AN=2184 GT:DS:GL:BD 0.66254580 1
1 87656813 rs35785318 CA C 1276 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0098;AVGPOST=0.9988;RSQ=0.9542;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87656847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5018;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87657042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6357;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87657077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87657153 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87657205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6506;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87657264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0179;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87657349 . AT A 830 PASS INDEL;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87657436 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9429;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87657451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6644;AVGPOST=0.9953;RSQ=0.9907;ERATE=0.0006;THETA=0.0049;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 87657458 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9833;ERATE=0.0004;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87657514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0053;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87657588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87657609 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87657680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0197;AVGPOST=0.9996;RSQ=0.9914;ERATE=0.0003;THETA=0.0023;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87657698 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0097;AVGPOST=0.9977;RSQ=0.9118;ERATE=0.0005;THETA=0.0049;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87657710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0090;AVGPOST=0.9991;RSQ=0.9588;ERATE=0.0003;THETA=0.0068;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87657841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.973;LDAF=0.8012;AVGPOST=0.9866;RSQ=0.9686;ERATE=0.0037;THETA=0.0097;AC=1754;AN=2184 GT:DS:GL:BD 0.80311358 1
1 87657879 . TG T 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5287;ERATE=0.0004;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87657884 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87657903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0566;AVGPOST=0.9956;RSQ=0.9680;ERATE=0.0003;THETA=0.0062;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 87657946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0184;AVGPOST=0.9977;RSQ=0.9568;ERATE=0.0005;THETA=0.0205;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87658019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87658043 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.967;LDAF=0.1490;AVGPOST=0.9880;RSQ=0.9642;ERATE=0.0024;THETA=0.0087;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 87658378 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87658435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9220;ERATE=0.0004;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87658485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.5753;AVGPOST=0.9935;RSQ=0.9890;ERATE=0.0008;THETA=0.0026;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 87658490 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0198;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87658828 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9989;RSQ=0.2158;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87658883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.960;LDAF=0.7505;AVGPOST=0.9600;RSQ=0.9214;ERATE=0.0052;THETA=0.0018;AC=1658;AN=2184 GT:DS:GL:BD 0.75915754 1
1 87658982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9767;ERATE=0.0004;THETA=0.0062;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87659068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87659069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.7726;AVGPOST=0.9963;RSQ=0.9916;ERATE=0.0005;THETA=0.0002;AC=1688;AN=2184 GT:DS:GL:BD 0.77289379 1
1 87659077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6283;ERATE=0.0004;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87659151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2598;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 87659197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8024;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87659252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87659257 . GC G 156 PASS INDEL;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7285;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87659269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87659274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7636;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 87659334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7323;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87659424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87659487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87659501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6784;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87659556 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87659585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2612;AVGPOST=0.9978;RSQ=0.9953;ERATE=0.0005;THETA=0.0001;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 87659772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9593;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87659795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4821;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87659796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0184;AVGPOST=0.9990;RSQ=0.9821;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87659798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7255;ERATE=0.0009;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87659817 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6595;AVGPOST=0.9900;RSQ=0.9832;ERATE=0.0027;THETA=0.0003;AC=1446;AN=2184 GT:DS:GL:BD 0.66208792 1
1 87659828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5512;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87659870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5146;AVGPOST=0.9969;RSQ=0.9954;ERATE=0.0006;THETA=0.0002;AC=1125;AN=2184 GT:DS:GL:BD 0.51510990 1
1 87659934 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8406;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87659977 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7685;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87659982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87660081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87660096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0071;AVGPOST=0.9959;RSQ=0.7886;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87660153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7457;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87660154 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.4225;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0005;THETA=0.0005;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 87660175 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87660209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.6012;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87660246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7214;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87660254 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9666;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87660287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5153;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87660375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0033;AVGPOST=0.9956;RSQ=0.5344;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87660430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2667;AVGPOST=0.9973;RSQ=0.9945;ERATE=0.0005;THETA=0.0002;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 87660519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8328;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87660520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.439;LDAF=0.0078;AVGPOST=0.9894;RSQ=0.4641;ERATE=0.0014;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87660656 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0364;AVGPOST=0.9991;RSQ=0.9894;ERATE=0.0004;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 87660681 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0387;AVGPOST=0.9972;RSQ=0.9697;ERATE=0.0008;THETA=0.0007;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 87660785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2506;AVGPOST=0.9974;RSQ=0.9940;ERATE=0.0006;THETA=0.0002;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 87660851 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87660909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8191;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87660929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.864;LDAF=0.0317;AVGPOST=0.9971;RSQ=0.9685;ERATE=0.0003;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 87660972 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5870;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87660979 . A AGT 304 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7134;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87661128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0360;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0003;THETA=0.0067;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 87661195 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8330;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87661245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87661453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87661455 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87661559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.7194;ERATE=0.0005;THETA=0.0044;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87661870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0411;AVGPOST=0.9973;RSQ=0.9749;ERATE=0.0007;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 87661891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.782;LDAF=0.0190;AVGPOST=0.9902;RSQ=0.7995;ERATE=0.0009;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87661927 rs34989207 CAA C 224 PASS INDEL;BAVGPOST=0.885;BRSQ=0.197;LDAF=0.1347;AVGPOST=0.8268;RSQ=0.4324;ERATE=0.0110;THETA=0.0012;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 87661955 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0102;AVGPOST=0.9989;RSQ=0.9528;ERATE=0.0003;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87662159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87662274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87662275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87662319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6755;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87662417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9299;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87662494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.963;LDAF=0.0977;AVGPOST=0.9931;RSQ=0.9741;ERATE=0.0004;THETA=0.0006;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 87662647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.969;LDAF=0.1173;AVGPOST=0.9950;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 87662648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87662660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87662671 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0528;AVGPOST=0.9983;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 87662682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1681;AVGPOST=0.9963;RSQ=0.9904;ERATE=0.0004;THETA=0.0016;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 87662723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0814;AVGPOST=0.9968;RSQ=0.9832;ERATE=0.0009;THETA=0.0008;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 87662753 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.966;LDAF=0.3343;AVGPOST=0.9773;RSQ=0.9657;ERATE=0.0075;THETA=0.0002;AC=730;AN=2184 GT:DS:GL:BD 0.33424908 0
1 87662862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0004;THETA=0.0052;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87662886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0378;AVGPOST=0.9957;RSQ=0.9612;ERATE=0.0017;THETA=0.0053;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87662970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87662999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.5169;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87663238 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87663425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5824;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87663518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87663532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.852;LDAF=0.9170;AVGPOST=0.9508;RSQ=0.7631;ERATE=0.0092;THETA=0.0002;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 87663599 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4697;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87663640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0157;AVGPOST=0.9959;RSQ=0.8977;ERATE=0.0006;THETA=0.0109;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87663733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0361;AVGPOST=0.9985;RSQ=0.9831;ERATE=0.0004;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87663844 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.2927;AVGPOST=0.9934;RSQ=0.9883;ERATE=0.0005;THETA=0.0003;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 87663871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.381;LDAF=0.0053;AVGPOST=0.9935;RSQ=0.4692;ERATE=0.0009;THETA=0.0051;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87663990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.929;LDAF=0.2932;AVGPOST=0.9738;RSQ=0.9535;ERATE=0.0022;THETA=0.0002;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 87664044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.971;LDAF=0.0377;AVGPOST=0.9928;RSQ=0.9295;ERATE=0.0004;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 87664198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7032;AVGPOST=0.9950;RSQ=0.9904;ERATE=0.0007;THETA=0.0003;AC=1536;AN=2184 GT:DS:GL:BD 0.70329672 1
1 87664251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0037;AVGPOST=0.9967;RSQ=0.6628;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87664256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0555;AVGPOST=0.9984;RSQ=0.9878;ERATE=0.0004;THETA=0.0004;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 87664257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9266;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87664333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87664336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9612;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87664395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0363;AVGPOST=0.9987;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87664396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87664502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9835;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87664584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2948;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0006;THETA=0.0004;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 87664606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4743;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87664969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87664994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0247;AVGPOST=0.9995;RSQ=0.9902;ERATE=0.0003;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 87665114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6371;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0006;THETA=0.0003;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 87665121 . GA G 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87665238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2942;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 87665254 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8364;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87665304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4367;AVGPOST=0.9941;RSQ=0.9904;ERATE=0.0005;THETA=0.0005;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 87665365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87665544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.702;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8458;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87665598 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0480;AVGPOST=0.9987;RSQ=0.9884;ERATE=0.0003;THETA=0.0002;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 87665659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87665685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87665802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87665847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9691;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87666165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0032;AVGPOST=0.9977;RSQ=0.7100;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87666215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4151;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87666356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0201;AVGPOST=0.9967;RSQ=0.9392;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87666416 . AC A 130 PASS INDEL;BAVGPOST=0.991;BRSQ=0.643;LDAF=0.0202;AVGPOST=0.9713;RSQ=0.4512;ERATE=0.0042;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87666512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87666678 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.753;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8173;ERATE=0.0007;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87666724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.887;LDAF=0.0185;AVGPOST=0.9916;RSQ=0.8540;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87666735 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0090;AVGPOST=0.9983;RSQ=0.9257;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87666768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0131;AVGPOST=0.9976;RSQ=0.9275;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87666818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0105;AVGPOST=0.9951;RSQ=0.8275;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87667032 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9411;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87667458 . G GA 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6572;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87667501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0231;AVGPOST=0.9993;RSQ=0.9906;ERATE=0.0003;THETA=0.0001;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87667574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0231;AVGPOST=0.9993;RSQ=0.9905;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87667618 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8517;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87667670 rs36062560 G GC 12419 PASS INDEL;BAVGPOST=0.980;BRSQ=0.892;LDAF=0.1081;AVGPOST=0.9437;RSQ=0.7894;ERATE=0.0134;THETA=0.0005;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 87667670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2920;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0005;THETA=0.0003;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 87667708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4712;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87667819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0075;AVGPOST=0.9982;RSQ=0.9049;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87667998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0403;AVGPOST=0.9970;RSQ=0.9701;ERATE=0.0005;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 87668090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0387;AVGPOST=0.9982;RSQ=0.9795;ERATE=0.0004;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 87668379 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0907;AVGPOST=0.9980;RSQ=0.9898;ERATE=0.0004;THETA=0.0002;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 87668596 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87668736 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7634;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87668760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1549;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 87668879 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87668970 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87669319 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87669570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7079;ERATE=0.0015;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87669588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7220;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87669671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4291;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87669744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0063;AVGPOST=0.9942;RSQ=0.6097;ERATE=0.0009;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87669767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0071;AVGPOST=0.9988;RSQ=0.9225;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87669834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5353;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87669974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87670010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0375;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 87670020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.7122;AVGPOST=0.9902;RSQ=0.9821;ERATE=0.0005;THETA=0.0023;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 87670092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87670100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1380;AVGPOST=0.9957;RSQ=0.9861;ERATE=0.0003;THETA=0.0008;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 87670154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8799;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87670163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9350;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87670225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5004;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87670261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3576;AVGPOST=0.9960;RSQ=0.9933;ERATE=0.0005;THETA=0.0004;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 87670333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0049;AVGPOST=0.9944;RSQ=0.5884;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87670394 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3605;AVGPOST=0.9959;RSQ=0.9928;ERATE=0.0008;THETA=0.0002;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 87670421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5682;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87670515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.944;LDAF=0.9385;AVGPOST=0.9862;RSQ=0.9048;ERATE=0.0021;THETA=0.0002;AC=2062;AN=2184 GT:DS:GL:BD 0.94413918 1
1 87670553 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0040;AVGPOST=0.9953;RSQ=0.5538;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87670591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8092;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87670593 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0329;AVGPOST=0.9978;RSQ=0.9701;ERATE=0.0005;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 87670683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.926;LDAF=0.0908;AVGPOST=0.9866;RSQ=0.9369;ERATE=0.0021;THETA=0.0002;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 87670741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.809;LDAF=0.0163;AVGPOST=0.9938;RSQ=0.8480;ERATE=0.0007;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87670788 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.964;LDAF=0.1266;AVGPOST=0.9746;RSQ=0.9211;ERATE=0.0017;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 87670802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.571;LDAF=0.0285;AVGPOST=0.9670;RSQ=0.5312;ERATE=0.0082;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87670815 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9484;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87670878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4653;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87670905 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.963;LDAF=0.9457;AVGPOST=0.9988;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=2065;AN=2184 GT:DS:GL:BD 0.94551283 1
1 87670935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9696;ERATE=0.0002;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87670977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0057;AVGPOST=0.9985;RSQ=0.8997;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87671072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87671087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0125;AVGPOST=0.9991;RSQ=0.9700;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87671259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3628;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=790;AN=2184 GT:DS:GL:BD 0.36172161 0
1 87671308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87671338 . AC A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87671348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8512;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87671445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87671575 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0173;AVGPOST=0.9928;RSQ=0.8367;ERATE=0.0008;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87671620 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0134;AVGPOST=0.9983;RSQ=0.9439;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87671675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4002;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87671749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5791;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87671820 . T TC 29996 PASS INDEL;BAVGPOST=0.961;BRSQ=0.762;LDAF=0.8915;AVGPOST=0.9259;RSQ=0.6949;ERATE=0.0233;THETA=0.0002;AC=1994;AN=2184 GT:DS:GL:BD 0.91300368 1
1 87671852 rs34745509 C CA 97589 PASS INDEL;BAVGPOST=0.992;BRSQ=0.935;LDAF=0.9412;AVGPOST=0.9936;RSQ=0.9567;ERATE=0.0005;THETA=0.0004;AC=2055;AN=2184 GT:DS:GL:BD 0.94093406 1
1 87671853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0002;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87671904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6183;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87671944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0068;AVGPOST=0.9981;RSQ=0.8872;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87672001 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6728;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87672088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7404;ERATE=0.0005;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87672122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9552;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87672272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.955;LDAF=0.1362;AVGPOST=0.9837;RSQ=0.9538;ERATE=0.0005;THETA=0.0002;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 87672275 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87672636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6056;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87672676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0029;AVGPOST=0.9960;RSQ=0.4849;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87672688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9235;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87672737 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87672838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9876;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87672884 . C CT 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8172;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87672973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3820;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87673043 . CG C 1713 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0303;AVGPOST=0.9952;RSQ=0.9396;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87673062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0235;AVGPOST=0.9986;RSQ=0.9704;ERATE=0.0005;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87673140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8302;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87673176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1456;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0004;THETA=0.0001;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 87673254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1861;AVGPOST=0.9958;RSQ=0.9885;ERATE=0.0007;THETA=0.0002;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 87673297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0255;AVGPOST=0.9987;RSQ=0.9768;ERATE=0.0004;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87673429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2749;AVGPOST=0.9957;RSQ=0.9909;ERATE=0.0008;THETA=0.0002;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 87673478 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6413;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87673661 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87673745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3231;AVGPOST=0.9948;RSQ=0.9900;ERATE=0.0008;THETA=0.0003;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 87673805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5994;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87673838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87673864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5216;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87673905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87673908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9081;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87674097 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87674134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1483;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 87674243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8253;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87674270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0203;AVGPOST=0.9991;RSQ=0.9813;ERATE=0.0004;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87674304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.979;LDAF=0.2886;AVGPOST=0.9907;RSQ=0.9835;ERATE=0.0013;THETA=0.0005;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 87674528 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.936;LDAF=0.0790;AVGPOST=0.9963;RSQ=0.9794;ERATE=0.0005;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 87674536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.920;LDAF=0.0771;AVGPOST=0.9945;RSQ=0.9712;ERATE=0.0004;THETA=0.0002;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 87674553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.923;LDAF=0.0259;AVGPOST=0.9963;RSQ=0.9465;ERATE=0.0003;THETA=0.0001;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87674560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3859;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87674764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.623;LDAF=0.0066;AVGPOST=0.9900;RSQ=0.4620;ERATE=0.0019;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87674773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7286;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87674792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7006;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87674827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9787;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87674941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8436;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87674956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7197;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87674993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87675022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0276;AVGPOST=0.9983;RSQ=0.9781;ERATE=0.0004;THETA=0.0040;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 87675100 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7396;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87675102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.966;LDAF=0.2942;AVGPOST=0.9809;RSQ=0.9674;ERATE=0.0089;THETA=0.0009;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 87675228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6130;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87675264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7370;ERATE=0.0003;THETA=0.0054;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87675331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7609;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87675366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0671;AVGPOST=0.9951;RSQ=0.9735;ERATE=0.0004;THETA=0.0026;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 87675376 . GC G 5911 PASS INDEL;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0691;AVGPOST=0.9950;RSQ=0.9726;ERATE=0.0005;THETA=0.0014;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 87675383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9971;RSQ=0.7833;ERATE=0.0004;THETA=0.0037;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87675397 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5073;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87675408 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.988;LDAF=0.6449;AVGPOST=0.9891;RSQ=0.9844;ERATE=0.0021;THETA=0.0002;AC=1408;AN=2184 GT:DS:GL:BD 0.64468867 1
1 87675414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.959;LDAF=0.0603;AVGPOST=0.9943;RSQ=0.9652;ERATE=0.0003;THETA=0.0035;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 87675469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0668;AVGPOST=0.9977;RSQ=0.9870;ERATE=0.0004;THETA=0.0041;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 87675494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5605;AVGPOST=0.9913;RSQ=0.9873;ERATE=0.0016;THETA=0.0008;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 87675511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87675553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1364;AVGPOST=0.9937;RSQ=0.9808;ERATE=0.0005;THETA=0.0009;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 87675605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87675726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0003;THETA=0.0059;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87675736 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87675772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1972;AVGPOST=0.9952;RSQ=0.9887;ERATE=0.0006;THETA=0.0004;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 87675815 . GC G 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6238;ERATE=0.0006;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87675831 . A AG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6485;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87675932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.4370;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0006;THETA=0.0004;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 87676032 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8494;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87676050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0611;AVGPOST=0.9993;RSQ=0.9944;ERATE=0.0003;THETA=0.0001;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 87676146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.6481;AVGPOST=0.9969;RSQ=0.9952;ERATE=0.0006;THETA=0.0002;AC=1416;AN=2184 GT:DS:GL:BD 0.64835167 1
1 87676170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1303;AVGPOST=0.9972;RSQ=0.9908;ERATE=0.0003;THETA=0.0021;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 87676265 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.915;LDAF=0.0184;AVGPOST=0.9946;RSQ=0.8819;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87676453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9291;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87676459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87676473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5754;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0004;THETA=0.0010;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 87676478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5741;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0005;THETA=0.0009;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 87676573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0589;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 87676649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87676677 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87676678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5745;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=1255;AN=2184 GT:DS:GL:BD 0.57463372 1
1 87676684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8544;ERATE=0.0004;THETA=0.0026;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87676718 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6399;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0005;THETA=0.0056;AC=1397;AN=2184 GT:DS:GL:BD 0.63965201 1
1 87676764 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87676861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87676921 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8576;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87676993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6522;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87677079 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87677143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.881;LDAF=0.0087;AVGPOST=0.9960;RSQ=0.8611;ERATE=0.0005;THETA=0.0017;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87677230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8581;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87677371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.972;LDAF=0.5497;AVGPOST=0.9859;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=1204;AN=2184 GT:DS:GL:BD 0.55128205 1
1 87677485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.971;LDAF=0.5500;AVGPOST=0.9844;RSQ=0.9804;ERATE=0.0007;THETA=0.0005;AC=1205;AN=2184 GT:DS:GL:BD 0.55173993 1
1 87677486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0653;AVGPOST=0.9966;RSQ=0.9818;ERATE=0.0004;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 87677487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87677544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87677566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87677654 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1779;AVGPOST=0.9968;RSQ=0.9923;ERATE=0.0005;THETA=0.0004;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 87677678 . GA G 103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0045;AVGPOST=0.9946;RSQ=0.5042;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87677739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5894;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87677765 . CCTT C 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5262;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87677830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9707;ERATE=0.0003;THETA=0.0024;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87677907 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0638;AVGPOST=0.9987;RSQ=0.9915;ERATE=0.0004;THETA=0.0006;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 87677919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6528;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87677945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7882;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87678022 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0334;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 87678285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0049;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87678337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8817;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87678353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87678451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87678496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87678550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87678565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87678583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87678683 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87678818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87678867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87678879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5735;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0006;THETA=0.0003;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 87678883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87678888 rs60255495 CCCACCAGATGGACTTCT C 16977 PASS INDEL;BAVGPOST=0.934;BRSQ=0.874;LDAF=0.3614;AVGPOST=0.8839;RSQ=0.8115;ERATE=0.0170;THETA=0.0003;AC=792;AN=2184 GT:DS:GL:BD 0.36263737 0
1 87678965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87679230 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5763;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0007;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 87679380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0114;AVGPOST=0.9971;RSQ=0.9084;ERATE=0.0005;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87679453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6363;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=1390;AN=2184 GT:DS:GL:BD 0.63644689 1
1 87679514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87679532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1649;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 87679545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87679697 . T TGCCA 962 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9375;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87679706 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87679713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6336;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87679790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5290;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87679856 rs35468463 G GGAC 11488 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0609;AVGPOST=0.9986;RSQ=0.9907;ERATE=0.0005;THETA=0.0003;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 87679917 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87679997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2341;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0005;THETA=0.0007;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 87680047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7092;ERATE=0.0006;THETA=0.0110;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87680359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87680394 rs35349340 A AG 78565 PASS INDEL;BAVGPOST=0.948;BRSQ=0.899;LDAF=0.6297;AVGPOST=0.9525;RSQ=0.9315;ERATE=0.0011;THETA=0.0066;AC=1374;AN=2184 GT:DS:GL:BD 0.62912089 1
1 87680572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0137;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87680584 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6696;ERATE=0.0003;THETA=0.0099;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87680645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87680652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87680758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87680829 . C CAGAA 39613 PASS INDEL;BAVGPOST=0.972;BRSQ=0.913;LDAF=0.1521;AVGPOST=0.9752;RSQ=0.9383;ERATE=0.0004;THETA=0.0043;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 87680864 . G GAAA 28348 PASS INDEL;BAVGPOST=0.972;BRSQ=0.913;LDAF=0.1496;AVGPOST=0.9753;RSQ=0.9384;ERATE=0.0004;THETA=0.0005;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 87680866 rs60938603 T TA 14006 PASS INDEL;BAVGPOST=0.972;BRSQ=0.911;LDAF=0.1489;AVGPOST=0.9763;RSQ=0.9401;ERATE=0.0003;THETA=0.0018;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 87680868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0050;AVGPOST=0.9970;RSQ=0.7796;ERATE=0.0005;THETA=0.0046;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87680895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87680900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0067;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87681011 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9076;ERATE=0.0004;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87681143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0003;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87681198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9434;ERATE=0.0003;THETA=0.0117;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87681251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.947;LDAF=0.0400;AVGPOST=0.9940;RSQ=0.9503;ERATE=0.0006;THETA=0.0012;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 87681353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0059;AVGPOST=0.9975;RSQ=0.8538;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87681414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9991;RSQ=0.9629;ERATE=0.0004;THETA=0.0137;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87681494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0063;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87681546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9803;ERATE=0.0003;THETA=0.0045;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87681615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.885;LDAF=0.0229;AVGPOST=0.9933;RSQ=0.8973;ERATE=0.0007;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87681716 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.492;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7034;ERATE=0.0007;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87681840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.748;LDAF=0.0097;AVGPOST=0.9966;RSQ=0.8586;ERATE=0.0004;THETA=0.0020;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87681841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.748;LDAF=0.0192;AVGPOST=0.9887;RSQ=0.7652;ERATE=0.0016;THETA=0.0035;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87681901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.879;LDAF=0.0116;AVGPOST=0.9948;RSQ=0.8532;ERATE=0.0006;THETA=0.0051;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87681933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0137;AVGPOST=0.9952;RSQ=0.8593;ERATE=0.0007;THETA=0.0031;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87681939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0056;AVGPOST=0.9961;RSQ=0.6624;ERATE=0.0013;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87681960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3953;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87681972 rs35654085 C CA 1291 PASS INDEL;BAVGPOST=0.921;BRSQ=0.587;LDAF=0.1457;AVGPOST=0.8496;RSQ=0.5092;ERATE=0.0151;THETA=0.0008;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 87681984 rs72173791 G GA 38026 PASS INDEL;BAVGPOST=0.813;BRSQ=0.490;LDAF=0.8351;AVGPOST=0.8495;RSQ=0.5968;ERATE=0.0056;THETA=0.0014;AC=1889;AN=2184 GT:DS:GL:BD 0.86492676 1
1 87681998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87682060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9489;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87682279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8568;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87682377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87682430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8933;ERATE=0.0003;THETA=0.0036;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87682550 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9765;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87682629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0145;AVGPOST=0.9991;RSQ=0.9768;ERATE=0.0003;THETA=0.0014;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87682631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9116;ERATE=0.0005;THETA=0.0042;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87682649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0454;AVGPOST=0.9984;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 87682787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9990;RSQ=0.9787;ERATE=0.0003;THETA=0.0023;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87682806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0003;THETA=0.0049;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87682909 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87683034 . G GA 657 PASS INDEL;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0117;AVGPOST=0.9972;RSQ=0.9040;ERATE=0.0003;THETA=0.0034;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87683036 . C CAG 1261 PASS INDEL;BAVGPOST=0.998;BRSQ=0.890;LDAF=0.0120;AVGPOST=0.9964;RSQ=0.8787;ERATE=0.0004;THETA=0.0025;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87683039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87683184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8855;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87683479 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87683527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9739;ERATE=0.0003;THETA=0.0026;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87683575 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.819;LDAF=0.0679;AVGPOST=0.9741;RSQ=0.8472;ERATE=0.0069;THETA=0.0046;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 87683594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.926;LDAF=0.0826;AVGPOST=0.9834;RSQ=0.9207;ERATE=0.0055;THETA=0.0010;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 87683980 rs67351015 T TC 61 PASS INDEL;BAVGPOST=0.998;BRSQ=0.621;LDAF=0.0046;AVGPOST=0.9949;RSQ=0.5796;ERATE=0.0022;THETA=0.0036;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87683987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0605;AVGPOST=0.9982;RSQ=0.9873;ERATE=0.0003;THETA=0.0017;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 87684017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87684065 . CT C 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5657;ERATE=0.0006;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87684083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0299;AVGPOST=0.9996;RSQ=0.9944;ERATE=0.0003;THETA=0.0080;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87684120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.1196;ERATE=0.0003;THETA=0.0033;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87684152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87684164 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0052;AVGPOST=0.9983;RSQ=0.8599;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87684202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87684336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6696;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87684340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9286;ERATE=0.0003;THETA=0.0047;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87684492 . T TG 2418 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0128;AVGPOST=0.9976;RSQ=0.9328;ERATE=0.0005;THETA=0.0083;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87684497 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.901;LDAF=0.0246;AVGPOST=0.9980;RSQ=0.9695;ERATE=0.0003;THETA=0.0020;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 87684523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0618;AVGPOST=0.9993;RSQ=0.9944;ERATE=0.0003;THETA=0.0007;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 87684533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8276;ERATE=0.0003;THETA=0.0054;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87684605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87685053 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9001;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87685169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0030;AVGPOST=0.9950;RSQ=0.3515;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87685247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87685321 . C CT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3385;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87685326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87685547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87685614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.7387;ERATE=0.0019;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87685628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6205;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87685749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87686000 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5745;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87686058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0168;AVGPOST=0.9988;RSQ=0.9701;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87686134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87686346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6207;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87686354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0106;AVGPOST=0.9986;RSQ=0.9439;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87686436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87686545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.9783;AVGPOST=0.9985;RSQ=0.9782;ERATE=0.0004;THETA=0.0004;AC=2138;AN=2184 GT:DS:GL:BD 0.97893775 1
1 87686822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6196;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87687081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0157;AVGPOST=0.9992;RSQ=0.9798;ERATE=0.0003;THETA=0.0015;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87687207 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87687300 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87687380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87687440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6516;ERATE=0.0006;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87687450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6347;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87687496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87687608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9524;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87687653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4849;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87687775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.9514;AVGPOST=0.9989;RSQ=0.9917;ERATE=0.0003;THETA=0.0012;AC=2077;AN=2184 GT:DS:GL:BD 0.95100731 1
1 87688042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6179;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87688080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5893;ERATE=0.0006;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87688287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5540;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0003;THETA=0.0009;AC=1210;AN=2184 GT:DS:GL:BD 0.55402929 1
1 87688534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87688663 . A AT 4173 PASS INDEL;BAVGPOST=0.435;BRSQ=0.089;LDAF=0.4721;AVGPOST=0.7223;RSQ=0.5645;ERATE=0.0144;THETA=0.0007;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 87688748 . CA C 175 PASS INDEL;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7520;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87688851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7190;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87688892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87689027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0913;AVGPOST=0.9953;RSQ=0.9791;ERATE=0.0005;THETA=0.0005;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 87689171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.414;LDAF=0.0047;AVGPOST=0.9940;RSQ=0.4968;ERATE=0.0010;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87689323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5919;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87689353 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87689377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4348;ERATE=0.0007;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87689449 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0271;AVGPOST=0.9977;RSQ=0.9599;ERATE=0.0005;THETA=0.0018;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87689455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6733;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87689531 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4889;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87689609 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7416;ERATE=0.0011;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87689635 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6540;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87689719 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4451;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87689974 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8446;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87689978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87690011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0044;AVGPOST=0.9980;RSQ=0.8310;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87690122 . CAGG C 295 PASS INDEL;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6449;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87690215 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7804;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87690221 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7652;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87690222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87690319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87690349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87690413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.609;LDAF=0.0075;AVGPOST=0.9895;RSQ=0.4856;ERATE=0.0024;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87690558 rs71704779 CAGG C 1449 PASS INDEL;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8740;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87690594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87690676 . CCTGT C 1502 PASS INDEL;BAVGPOST=0.997;BRSQ=0.786;LDAF=0.0078;AVGPOST=0.9956;RSQ=0.7832;ERATE=0.0008;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87690684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87690787 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0312;AVGPOST=0.9992;RSQ=0.9892;ERATE=0.0005;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 87691018 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87691164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9116;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87691194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8452;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87691226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6111;AVGPOST=0.9931;RSQ=0.9881;ERATE=0.0007;THETA=0.0008;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 87691227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3222;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87691418 rs67308008 AAAG A 23628 PASS INDEL;BAVGPOST=0.961;BRSQ=0.931;LDAF=0.3703;AVGPOST=0.9487;RSQ=0.9212;ERATE=0.0053;THETA=0.0003;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 87691514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87691678 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9227;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87691814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9177;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87691842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87691861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9474;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87691869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9986;RSQ=0.9453;ERATE=0.0005;THETA=0.0037;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87691896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7068;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87691975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0126;AVGPOST=0.9978;RSQ=0.9356;ERATE=0.0005;THETA=0.0015;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87692001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.946;LDAF=0.3428;AVGPOST=0.9670;RSQ=0.9458;ERATE=0.0032;THETA=0.0006;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 87692332 . GGGGCCTGCCTGGA G 1390 PASS INDEL;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0077;AVGPOST=0.9968;RSQ=0.8363;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87692358 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4360;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87692386 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87692531 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6272;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87692581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7372;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87692615 . A AG 9579 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0529;AVGPOST=0.9984;RSQ=0.9887;ERATE=0.0005;THETA=0.0041;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 87692760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87692857 . TC T 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7433;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87692991 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.370;LDAF=0.0031;AVGPOST=0.9964;RSQ=0.5397;ERATE=0.0010;THETA=0.0057;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87693227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87693240 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87693408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87693455 . A AT 15948 PASS INDEL;BAVGPOST=0.962;BRSQ=0.928;LDAF=0.5707;AVGPOST=0.9394;RSQ=0.9056;ERATE=0.0075;THETA=0.0006;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 87693495 rs11376635 T TC 66715 PASS INDEL;BAVGPOST=0.985;BRSQ=0.971;LDAF=0.6092;AVGPOST=0.9771;RSQ=0.9653;ERATE=0.0004;THETA=0.0007;AC=1330;AN=2184 GT:DS:GL:BD 0.60897434 1
1 87693497 . C CA 9226 PASS INDEL;BAVGPOST=0.962;BRSQ=0.927;LDAF=0.5736;AVGPOST=0.9453;RSQ=0.9165;ERATE=0.0027;THETA=0.0008;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 87693498 . C CA 8508 PASS INDEL;BAVGPOST=0.957;BRSQ=0.920;LDAF=0.5704;AVGPOST=0.9271;RSQ=0.8879;ERATE=0.0138;THETA=0.0012;AC=1258;AN=2184 GT:DS:GL:BD 0.57600731 1
1 87693500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8710;ERATE=0.0008;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87693674 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.800;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7166;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87693772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.6142;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87693950 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0481;AVGPOST=0.9987;RSQ=0.9870;ERATE=0.0004;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 87693972 . C CT 782 PASS INDEL;BAVGPOST=0.659;BRSQ=0.179;LDAF=0.3272;AVGPOST=0.6585;RSQ=0.3335;ERATE=0.0329;THETA=0.0006;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 87694140 . GA G 48 PASS INDEL;BAVGPOST=0.966;BRSQ=0.073;LDAF=0.0715;AVGPOST=0.8955;RSQ=0.4020;ERATE=0.0056;THETA=0.0014;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 87694163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6585;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87694292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6473;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87694307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0148;AVGPOST=0.9975;RSQ=0.9267;ERATE=0.0004;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87694432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6039;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87694560 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4788;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87694688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0490;AVGPOST=0.9989;RSQ=0.9909;ERATE=0.0004;THETA=0.0012;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 87694714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0121;AVGPOST=0.9996;RSQ=0.9848;ERATE=0.0003;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87694947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0069;AVGPOST=0.9985;RSQ=0.9169;ERATE=0.0004;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87694970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5365;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87695017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7147;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87695100 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87695136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6405;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87695176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8810;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87695323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6685;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87695613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0088;AVGPOST=0.9970;RSQ=0.8608;ERATE=0.0006;THETA=0.0013;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87695625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6118;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87695673 . AAC A 50 PASS INDEL;BAVGPOST=0.986;BRSQ=0.540;LDAF=0.0297;AVGPOST=0.9635;RSQ=0.4760;ERATE=0.0082;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87695686 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0071;AVGPOST=0.9982;RSQ=0.9013;ERATE=0.0005;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87695691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8547;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87696110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.668;LDAF=0.0296;AVGPOST=0.9852;RSQ=0.8021;ERATE=0.0006;THETA=0.0011;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87696111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.384;LDAF=0.0233;AVGPOST=0.9713;RSQ=0.4959;ERATE=0.0019;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87696437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.449;LDAF=0.0112;AVGPOST=0.9861;RSQ=0.5052;ERATE=0.0010;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87696453 . GC G 28 PASS INDEL;BAVGPOST=0.999;BRSQ=0.408;LDAF=0.0125;AVGPOST=0.9823;RSQ=0.4121;ERATE=0.0019;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87696458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.455;LDAF=0.0140;AVGPOST=0.9854;RSQ=0.5876;ERATE=0.0021;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87696601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4555;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87696649 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4990;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87696733 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87696747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87696784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8072;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87696909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6259;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87696914 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6940;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87697061 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0481;AVGPOST=0.9993;RSQ=0.9930;ERATE=0.0003;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 87697079 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87697105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87697152 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0094;AVGPOST=0.9990;RSQ=0.9539;ERATE=0.0004;THETA=0.0028;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87697228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0498;AVGPOST=0.9970;RSQ=0.9742;ERATE=0.0004;THETA=0.0012;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 87697235 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0134;AVGPOST=0.9968;RSQ=0.8996;ERATE=0.0003;THETA=0.0025;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87697299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0160;AVGPOST=0.9969;RSQ=0.9349;ERATE=0.0007;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87697432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4619;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87697477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0035;AVGPOST=0.9951;RSQ=0.4538;ERATE=0.0008;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87697524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9404;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87697638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87697811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87697923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6961;ERATE=0.0006;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87698042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87698073 . ATTGT A 1647 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9478;ERATE=0.0005;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87698130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87698231 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6551;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87698277 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87698588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9124;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87698594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6181;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87698631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.778;LDAF=0.0062;AVGPOST=0.9978;RSQ=0.8675;ERATE=0.0004;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87698713 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.7257;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87698804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.977;LDAF=0.2185;AVGPOST=0.9954;RSQ=0.9895;ERATE=0.0005;THETA=0.0004;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 87698843 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.754;LDAF=0.0099;AVGPOST=0.9933;RSQ=0.7239;ERATE=0.0009;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87698846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3252;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87698996 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9852;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87699027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87699225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2360;AVGPOST=0.9970;RSQ=0.9935;ERATE=0.0006;THETA=0.0006;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 87699264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0174;AVGPOST=0.9982;RSQ=0.9701;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87699266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2195;AVGPOST=0.9973;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 87699273 . C CT 227 PASS INDEL;BAVGPOST=0.998;BRSQ=0.609;LDAF=0.0049;AVGPOST=0.9926;RSQ=0.4802;ERATE=0.0013;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87699355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0046;AVGPOST=0.9972;RSQ=0.7482;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87699492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.8823;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87699660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7054;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87699931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5933;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87700030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5762;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87700140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87700379 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87700402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1246;AVGPOST=0.9986;RSQ=0.9944;ERATE=0.0005;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 87700411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7638;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87700412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2349;AVGPOST=0.9985;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 87700448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87700504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6853;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87700506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9498;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87700588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87700596 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6983;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87700752 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9216;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87700803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7079;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87700827 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.719;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5603;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87700923 . GAGTACAA G 2899 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9718;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87700973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5953;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87701014 . CT C 701 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0102;AVGPOST=0.9977;RSQ=0.9032;ERATE=0.0006;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87701042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.497;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3589;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87701157 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.9119;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87701419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87701443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9062;ERATE=0.0004;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87701492 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0256;AVGPOST=0.9994;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87701537 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6390;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87701775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5836;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87701927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1241;AVGPOST=0.9983;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 87701950 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9527;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87702076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1707;AVGPOST=0.9980;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 87702086 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9317;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=2035;AN=2184 GT:DS:GL:BD 0.93177658 1
1 87702158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87702185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2143;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 87702235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5951;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87702288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0056;AVGPOST=0.9975;RSQ=0.8330;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87702461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7515;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87702508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1247;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 87702517 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1259;AVGPOST=0.9973;RSQ=0.9892;ERATE=0.0005;THETA=0.0008;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 87702579 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.680;LDAF=0.0085;AVGPOST=0.9942;RSQ=0.7209;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87702654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7059;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87702663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8580;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87702682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2343;AVGPOST=0.9975;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 87702767 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.996;LDAF=0.3337;AVGPOST=0.9965;RSQ=0.9933;ERATE=0.0005;THETA=0.0006;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 87702774 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87702824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9486;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87702970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87703025 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.9113;ERATE=0.0004;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87703094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87703108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4606;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87703113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6960;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87703114 . GA G 268 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9009;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87703419 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8416;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87703525 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5064;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87703605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8306;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87703637 . AG A 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4772;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87703692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5429;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87703711 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6700;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87703713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87704043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6664;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87704050 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.455;LDAF=0.0045;AVGPOST=0.9936;RSQ=0.4095;ERATE=0.0020;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87704117 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87704299 rs57452335 T TC 124386 PASS INDEL;BAVGPOST=0.995;BRSQ=0.821;LDAF=0.9854;AVGPOST=0.9956;RSQ=0.8843;ERATE=0.0003;THETA=0.0002;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 87704401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87704516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87704642 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7981;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87704662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0938;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 87704869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87704975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0152;AVGPOST=0.9993;RSQ=0.9786;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87705047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87705055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2410;AVGPOST=0.9963;RSQ=0.9928;ERATE=0.0005;THETA=0.0006;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 87705107 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8115;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87705208 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4822;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87705310 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7856;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87705428 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0061;AVGPOST=0.9946;RSQ=0.6578;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87705506 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7517;ERATE=0.0005;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87705592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0077;AVGPOST=0.9939;RSQ=0.6670;ERATE=0.0009;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87705672 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.710;LDAF=0.0240;AVGPOST=0.9894;RSQ=0.8260;ERATE=0.0006;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87705724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.575;LDAF=0.0036;AVGPOST=0.9963;RSQ=0.5660;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87705734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5588;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87705756 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5097;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87706166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0050;AVGPOST=0.9974;RSQ=0.8117;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87706167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4777;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87706430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7691;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87706443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6035;AVGPOST=0.9975;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=1316;AN=2184 GT:DS:GL:BD 0.60256410 1
1 87706588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9324;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87706600 . TCC T 234 PASS INDEL;BAVGPOST=0.996;BRSQ=0.644;LDAF=0.0125;AVGPOST=0.9875;RSQ=0.5848;ERATE=0.0036;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87706642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4216;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87706888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0035;AVGPOST=0.9980;RSQ=0.7389;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87706931 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87706966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7931;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87707002 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0160;AVGPOST=0.9979;RSQ=0.9451;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87707119 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.620;LDAF=0.0059;AVGPOST=0.9962;RSQ=0.7310;ERATE=0.0008;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87707341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.475;LDAF=0.0147;AVGPOST=0.9779;RSQ=0.3992;ERATE=0.0046;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87707446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.461;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4954;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87707471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.6184;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87707556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7712;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87707600 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5819;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87707847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4802;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87707937 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6994;AVGPOST=0.9965;RSQ=0.9931;ERATE=0.0005;THETA=0.0004;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 87707965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6402;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87708009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6414;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87708025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.816;LDAF=0.0139;AVGPOST=0.9929;RSQ=0.8018;ERATE=0.0007;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87708028 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5749;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87708030 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87708096 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87708125 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87708266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8664;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87708382 . C CT 2429 PASS INDEL;BAVGPOST=0.735;BRSQ=0.341;LDAF=0.2755;AVGPOST=0.7326;RSQ=0.4497;ERATE=0.0532;THETA=0.0003;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 87708414 . TC T 30546 PASS INDEL;BAVGPOST=0.956;BRSQ=0.920;LDAF=0.6840;AVGPOST=0.9759;RSQ=0.9605;ERATE=0.0027;THETA=0.0002;AC=1504;AN=2184 GT:DS:GL:BD 0.68864471 1
1 87708421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.911;LDAF=0.6486;AVGPOST=0.9185;RSQ=0.8735;ERATE=0.0175;THETA=0.0006;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 87708422 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8719;ERATE=0.0005;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87708469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.867;LDAF=0.0176;AVGPOST=0.9948;RSQ=0.8851;ERATE=0.0006;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87708479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6413;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87708544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0066;AVGPOST=0.9960;RSQ=0.7333;ERATE=0.0007;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87708565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.3682;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87708572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87708758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6541;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87708816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0174;AVGPOST=0.9969;RSQ=0.9319;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87708926 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7209;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87708976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87709000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8780;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87709115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87709206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6892;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87709367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0696;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87709420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6335;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87709426 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87709628 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7094;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87709637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0698;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0002;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87709673 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9164;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87709715 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0367;AVGPOST=0.9983;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 87709797 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0695;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0002;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87709826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.9092;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87709858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9350;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87709898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0696;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87709961 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0695;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0002;THETA=0.0005;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87710027 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87710050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8678;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87710091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87710129 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9992;RSQ=0.9735;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87710152 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9672;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87710254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9717;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87710316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5897;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87710319 . A AAC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87710346 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87710359 . G GA 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87710417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9552;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87710552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0702;AVGPOST=0.9982;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87710583 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87710623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7568;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87710633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9436;ERATE=0.0002;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87710638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87710781 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5887;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87710789 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0695;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0002;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87710849 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0042;AVGPOST=0.9943;RSQ=0.5582;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87711043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0698;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87711049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8357;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87711089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0730;AVGPOST=0.9976;RSQ=0.9879;ERATE=0.0003;THETA=0.0006;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 87711106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.645;LDAF=0.0203;AVGPOST=0.9855;RSQ=0.7616;ERATE=0.0006;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87711283 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4251;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87711297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5940;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87711313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9484;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87711379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0705;AVGPOST=0.9980;RSQ=0.9913;ERATE=0.0004;THETA=0.0006;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 87711385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87711386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87711418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6532;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87711494 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8418;AVGPOST=0.9977;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 87711581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87711624 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87711644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0697;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87711664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.9175;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87711677 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0142;AVGPOST=0.9996;RSQ=0.9874;ERATE=0.0002;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87711872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1826;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 87711983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4389;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87712018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6720;AVGPOST=0.9969;RSQ=0.9950;ERATE=0.0007;THETA=0.0003;AC=1469;AN=2184 GT:DS:GL:BD 0.67261904 1
1 87712049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87712069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0696;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87712187 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9672;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87712389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0696;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87712448 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2692;AVGPOST=0.9927;RSQ=0.9854;ERATE=0.0011;THETA=0.0003;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 87712497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1641;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0005;THETA=0.0002;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 87712545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9995;RSQ=0.9708;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87712554 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0695;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0002;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87712614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9459;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87712674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0090;AVGPOST=0.9974;RSQ=0.8940;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87712844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5394;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87712889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.845;LDAF=0.0299;AVGPOST=0.9922;RSQ=0.9062;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87712948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1524;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 87713048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0697;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87713071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8949;ERATE=0.0002;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87713113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87713172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8476;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87713174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9097;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87713251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87713278 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1641;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 87713283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6474;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87713293 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87713319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7632;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87713322 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2968;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0004;THETA=0.0005;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 87713366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7932;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87713369 . CT C 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5931;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87713439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0692;AVGPOST=0.9990;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 87713483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7403;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87713568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87713590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.8490;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0005;THETA=0.0002;AC=1854;AN=2184 GT:DS:GL:BD 0.84890109 1
1 87713647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5274;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87713677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0204;AVGPOST=0.9994;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87713696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87713747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4850;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87713807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87713904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87713915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=0.9988;RSQ=0.9586;ERATE=0.0005;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87714055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0075;AVGPOST=0.9980;RSQ=0.8855;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87714056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5044;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87714083 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.7128;AVGPOST=0.9843;RSQ=0.9716;ERATE=0.0019;THETA=0.0005;AC=1562;AN=2184 GT:DS:GL:BD 0.71520144 1
1 87714166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5508;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87714194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.838;LDAF=0.0566;AVGPOST=0.9747;RSQ=0.8227;ERATE=0.0009;THETA=0.0010;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 87714229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.418;LDAF=0.0057;AVGPOST=0.9954;RSQ=0.6832;ERATE=0.0004;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87714299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8182;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87714353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.576;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7779;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87714365 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.4866;AVGPOST=0.9815;RSQ=0.9765;ERATE=0.0019;THETA=0.0032;AC=1064;AN=2184 GT:DS:GL:BD 0.48717949 0
1 87714387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.814;LDAF=0.0183;AVGPOST=0.9911;RSQ=0.8290;ERATE=0.0009;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87714450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4287;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87714526 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87714553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0662;AVGPOST=0.9969;RSQ=0.9814;ERATE=0.0006;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 87714672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0723;AVGPOST=0.9840;RSQ=0.9104;ERATE=0.0012;THETA=0.0012;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 87714799 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.834;LDAF=0.0099;AVGPOST=0.9958;RSQ=0.8313;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87714862 rs67779751 ACT A 39832 PASS INDEL;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.6382;AVGPOST=0.9707;RSQ=0.9539;ERATE=0.0040;THETA=0.0006;AC=1406;AN=2184 GT:DS:GL:BD 0.64377290 1
1 87714879 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0051;AVGPOST=0.9954;RSQ=0.6432;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87715028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.5957;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87715037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8058;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87715275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87715352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.865;LDAF=0.0204;AVGPOST=0.9927;RSQ=0.8859;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87715465 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0645;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 87715509 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9874;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87715520 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87715531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7300;ERATE=0.0006;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87715580 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4891;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0015;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 87715590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87715645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87715653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9771;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87715668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9675;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87715729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0646;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 87715771 rs113989509 GCT G 535 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9414;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87715894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0644;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 87715907 . GTGTCAAA G 246 PASS INDEL;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87715984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 87716074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0668;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 87716134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87716146 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87716204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8826;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87716380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 87716420 . CAT C 10560 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0676;AVGPOST=0.9985;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 87716439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0106;AVGPOST=0.9984;RSQ=0.9379;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87716487 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87716518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8186;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87716541 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6298;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87716566 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87716584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8023;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87716613 . C CATGCCACCGATG 1084 PASS INDEL;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6344;ERATE=0.0005;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87716710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5711;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87716720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87716734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87716741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5562;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0005;THETA=0.0004;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 87716775 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0657;AVGPOST=0.9991;RSQ=0.9944;ERATE=0.0003;THETA=0.0009;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 87716835 rs11404864 A AC 48436 PASS INDEL;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5514;AVGPOST=0.9888;RSQ=0.9846;ERATE=0.0024;THETA=0.0006;AC=1203;AN=2184 GT:DS:GL:BD 0.55082417 1
1 87716951 . C CA 8201 PASS INDEL;BAVGPOST=0.898;BRSQ=0.813;LDAF=0.4315;AVGPOST=0.8693;RSQ=0.8075;ERATE=0.0220;THETA=0.0003;AC=975;AN=2184 GT:DS:GL:BD 0.44642857 0
1 87716957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9392;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87716990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87716992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1656;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 87717027 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87717104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4504;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87717226 . T TG 8363 PASS INDEL;BAVGPOST=0.846;BRSQ=0.757;LDAF=0.4487;AVGPOST=0.8013;RSQ=0.7328;ERATE=0.0193;THETA=0.0002;AC=1017;AN=2184 GT:DS:GL:BD 0.46565935 0
1 87717237 rs61217134 GA G 28785 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.7151;AVGPOST=0.9857;RSQ=0.9768;ERATE=0.0015;THETA=0.0004;AC=1568;AN=2184 GT:DS:GL:BD 0.71794873 1
1 87717243 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.2179;AVGPOST=0.9908;RSQ=0.9806;ERATE=0.0005;THETA=0.0006;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 87717308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87717339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0110;AVGPOST=0.9975;RSQ=0.9315;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87717340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4879;AVGPOST=0.9968;RSQ=0.9962;ERATE=0.0005;THETA=0.0010;AC=1064;AN=2184 GT:DS:GL:BD 0.48717949 0
1 87717375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9784;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87717527 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8151;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87717564 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9593;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87717572 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7508;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87717581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.613;LDAF=0.0054;AVGPOST=0.9957;RSQ=0.6678;ERATE=0.0008;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87717730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5446;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87717781 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.5544;AVGPOST=0.9932;RSQ=0.9916;ERATE=0.0004;THETA=0.0014;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 87717796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.5534;AVGPOST=0.9943;RSQ=0.9928;ERATE=0.0005;THETA=0.0006;AC=1209;AN=2184 GT:DS:GL:BD 0.55357140 1
1 87717800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8151;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87717862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9987;RSQ=0.9466;ERATE=0.0004;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87717872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.693;LDAF=0.0066;AVGPOST=0.9965;RSQ=0.7776;ERATE=0.0004;THETA=0.0035;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87717948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7021;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87718024 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7220;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0010;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 87718073 . CT C 53 PASS INDEL;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.5975;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87718119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0661;AVGPOST=0.9984;RSQ=0.9899;ERATE=0.0003;THETA=0.0004;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 87718140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5572;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0004;THETA=0.0018;AC=1215;AN=2184 GT:DS:GL:BD 0.55631870 1
1 87718141 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0735;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 87718236 . TA T 4190 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0349;AVGPOST=0.9994;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 87718268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87718296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8110;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87718319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8827;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87718322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0735;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0003;THETA=0.0007;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 87718333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7223;AVGPOST=0.9957;RSQ=0.9916;ERATE=0.0010;THETA=0.0007;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 87718362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.7194;AVGPOST=0.9908;RSQ=0.9835;ERATE=0.0015;THETA=0.0007;AC=1577;AN=2184 GT:DS:GL:BD 0.72206962 1
1 87718463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6781;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87718809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.5540;AVGPOST=0.9820;RSQ=0.9750;ERATE=0.0019;THETA=0.0006;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 87718936 . CA C 9037 PASS INDEL;BAVGPOST=0.908;BRSQ=0.823;LDAF=0.6264;AVGPOST=0.8598;RSQ=0.7813;ERATE=0.0180;THETA=0.0002;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 87719045 rs66690593 AC A 46615 PASS INDEL;BAVGPOST=0.965;BRSQ=0.930;LDAF=0.7096;AVGPOST=0.9773;RSQ=0.9595;ERATE=0.0014;THETA=0.0006;AC=1563;AN=2184 GT:DS:GL:BD 0.71565932 1
1 87719046 . CA C 24649 PASS INDEL;BAVGPOST=0.984;BRSQ=0.271;LDAF=0.9866;AVGPOST=0.9814;RSQ=0.4537;ERATE=0.0009;THETA=0.0005;AC=2168;AN=2184 GT:DS:GL:BD 0.99267399 1
1 87719048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.824;LDAF=0.0134;AVGPOST=0.9951;RSQ=0.8532;ERATE=0.0005;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87719104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9649;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87719125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9736;ERATE=0.0003;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87719196 rs71006339 AAG A 36 PASS INDEL;BAVGPOST=0.956;BRSQ=0.086;LDAF=0.1679;AVGPOST=0.7489;RSQ=0.2930;ERATE=0.0149;THETA=0.0010;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 87719215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8204;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87719219 . AAG A 258 PASS INDEL;BAVGPOST=0.975;BRSQ=0.535;LDAF=0.0504;AVGPOST=0.9361;RSQ=0.4576;ERATE=0.0129;THETA=0.0008;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87719229 . AAG A 536 PASS INDEL;BAVGPOST=0.973;BRSQ=0.511;LDAF=0.0488;AVGPOST=0.9481;RSQ=0.5455;ERATE=0.0091;THETA=0.0022;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 87719247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9482;ERATE=0.0004;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87719346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.921;LDAF=0.0827;AVGPOST=0.9908;RSQ=0.9537;ERATE=0.0009;THETA=0.0010;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 87719456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9681;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87719471 . CTG C 202 PASS INDEL;BAVGPOST=0.989;BRSQ=0.627;LDAF=0.0228;AVGPOST=0.9736;RSQ=0.5330;ERATE=0.0069;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87719491 . CTG C 31 PASS INDEL;BAVGPOST=0.996;BRSQ=0.571;LDAF=0.0088;AVGPOST=0.9894;RSQ=0.5365;ERATE=0.0020;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87719556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87719598 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.953;LDAF=0.0763;AVGPOST=0.9924;RSQ=0.9611;ERATE=0.0030;THETA=0.0015;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 87719604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9202;ERATE=0.0004;THETA=0.0019;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87719628 . CGT C 276 PASS INDEL;BAVGPOST=0.982;BRSQ=0.677;LDAF=0.0457;AVGPOST=0.9518;RSQ=0.5611;ERATE=0.0154;THETA=0.0014;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87719635 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87719642 . AGT A 47 PASS INDEL;BAVGPOST=0.977;BRSQ=0.518;LDAF=0.0448;AVGPOST=0.9439;RSQ=0.4863;ERATE=0.0082;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 87719796 . GT G 108 PASS INDEL;BAVGPOST=0.994;BRSQ=0.671;LDAF=0.0061;AVGPOST=0.9954;RSQ=0.6847;ERATE=0.0007;THETA=0.0024;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87719805 . TG T 40 PASS INDEL;BAVGPOST=0.994;BRSQ=0.663;LDAF=0.0072;AVGPOST=0.9917;RSQ=0.5995;ERATE=0.0009;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87719806 . TGTGA T 221 PASS INDEL;BAVGPOST=0.998;BRSQ=0.641;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7286;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87719888 . TA T 1171 PASS INDEL;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0121;AVGPOST=0.9939;RSQ=0.8267;ERATE=0.0004;THETA=0.0013;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87719976 . CTG C 164 PASS INDEL;BAVGPOST=0.985;BRSQ=0.559;LDAF=0.0290;AVGPOST=0.9663;RSQ=0.5329;ERATE=0.0096;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87719988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87719990 . AGT A 7 PASS INDEL;BAVGPOST=0.968;BRSQ=0.092;LDAF=0.0955;AVGPOST=0.8457;RSQ=0.2791;ERATE=0.0120;THETA=0.0027;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87720005 . AGT A 176 PASS INDEL;BAVGPOST=0.991;BRSQ=0.609;LDAF=0.0151;AVGPOST=0.9838;RSQ=0.5653;ERATE=0.0059;THETA=0.0027;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87720047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0277;AVGPOST=0.9991;RSQ=0.9875;ERATE=0.0003;THETA=0.0014;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87720075 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9738;ERATE=0.0003;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87720203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7152;ERATE=0.0007;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87720211 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87720230 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8127;ERATE=0.0005;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87720337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9646;ERATE=0.0003;THETA=0.0023;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87720373 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87720393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8450;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87720502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87720535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6208;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87720741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87721201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87721256 . GC G 20 PASS INDEL;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6583;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87721306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87721337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0187;AVGPOST=0.9994;RSQ=0.9877;ERATE=0.0003;THETA=0.0019;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87721407 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87721434 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87721491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87721540 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87721605 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6660;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87721842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87721965 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87721978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.9110;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87722035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87722179 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0122;AVGPOST=0.9991;RSQ=0.9690;ERATE=0.0003;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87722200 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87722247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87722485 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0288;AVGPOST=0.9995;RSQ=0.9929;ERATE=0.0003;THETA=0.0012;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 87722493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87722512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0022;AVGPOST=0.9999;RSQ=0.9736;ERATE=0.0003;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87722602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87722675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87722748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87722837 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9784;ERATE=0.0004;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87722901 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87722933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9901;ERATE=0.0003;THETA=0.0025;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87723352 . C CTT 223 PASS INDEL;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6559;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87723539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7353;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87723553 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7476;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87723556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8185;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87723604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.412;LDAF=0.0036;AVGPOST=0.9970;RSQ=0.6768;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87723659 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87723928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9337;ERATE=0.0004;THETA=0.0053;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87724026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87724163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87724254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2754;AVGPOST=0.9941;RSQ=0.9897;ERATE=0.0005;THETA=0.0005;AC=599;AN=2184 GT:DS:GL:BD 0.27426741 0
1 87724287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87724291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7083;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87724320 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8425;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87724341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8887;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87724373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.974;LDAF=0.3917;AVGPOST=0.9931;RSQ=0.9900;ERATE=0.0004;THETA=0.0002;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 87724405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.973;LDAF=0.5081;AVGPOST=0.9808;RSQ=0.9744;ERATE=0.0042;THETA=0.0011;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 87724406 . GTCTT G 149 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4652;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87724440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5170;AVGPOST=0.9966;RSQ=0.9949;ERATE=0.0011;THETA=0.0003;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 87724618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3719;AVGPOST=0.9962;RSQ=0.9941;ERATE=0.0010;THETA=0.0006;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 87724641 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87724826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5621;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87724867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7146;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87724923 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0021;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87725041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87725411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.888;LDAF=0.0243;AVGPOST=0.9984;RSQ=0.9714;ERATE=0.0003;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 87725437 . AGT A 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4014;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87725489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9781;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87725604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7833;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87725605 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87725697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6802;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87725829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87725830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0218;AVGPOST=0.9973;RSQ=0.9526;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87725857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9678;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87725907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87725984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8677;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87726056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87726206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87726480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7271;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87726800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87726831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87726860 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0029;AVGPOST=0.9964;RSQ=0.5233;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87726957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0112;AVGPOST=0.9979;RSQ=0.9162;ERATE=0.0009;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87726994 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87727096 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9976;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0003;THETA=0.0004;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 87727265 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7345;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87727267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9977;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 87727271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87727408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6652;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87727414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87727502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8724;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87727641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87727838 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6040;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87727868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87727904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3717;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0006;THETA=0.0002;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 87727933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7046;AVGPOST=0.9976;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 87728026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87728057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.8978;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87728059 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87728061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87728071 MERGED_DEL_2_2873 GTACTTATATCTGTCTTACATATAGCTGTGGTGAGGATTAAATAATGTAATGCAGGCACAACACACTGGACTAGGCTGAGCTTGGACACAGGCAGTGGCAGAACCCACACTAGAACCCAGTGCTTTAGACTTTTCCGGGTGGGCCACACAGGTGGAGGGAGGGCTGCGCTGATTAGCCGTGGATAGCACG G . . SV;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5043;ERATE=0.0004;THETA=0.0003;CIEND=-71;82;CIPOS=-93;64;END=33809167;HOMLEN=91;HOMSEQ=TACTTATATCTGTCTTACATATAGCTGTGGTGAGGATTAAA GT:DS:GL:BD 0.00045788 0
1 87728228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9331;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87728249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9634;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87728508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8774;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87728533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87728603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8092;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87728606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8241;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87728610 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8911;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87728643 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87728672 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87728739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87728780 . T TG 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4711;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87728837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7564;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87728839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6164;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87728857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0056;AVGPOST=0.9981;RSQ=0.8656;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87728906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.4523;AVGPOST=0.9961;RSQ=0.9944;ERATE=0.0003;THETA=0.0082;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 87729002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8566;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87729034 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5250;ERATE=0.0003;THETA=0.0073;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87729065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0163;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87729077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0048;AVGPOST=0.9964;RSQ=0.7218;ERATE=0.0005;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87729160 . TGA T 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3946;ERATE=0.0005;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87729222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7736;ERATE=0.0005;THETA=0.0053;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87729377 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87729397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7329;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87729400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5569;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87729525 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8181;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87729629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6366;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87729641 . A AC 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5705;ERATE=0.0004;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87729702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.2347;AVGPOST=0.9925;RSQ=0.9850;ERATE=0.0005;THETA=0.0004;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 87729714 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8614;ERATE=0.0005;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87729754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9806;ERATE=0.0003;THETA=0.0102;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87729759 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87729793 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87729809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0305;AVGPOST=0.9976;RSQ=0.9707;ERATE=0.0003;THETA=0.0047;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87729943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0008;AVGPOST=0.9985;RSQ=0.2350;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87729992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4044;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87730176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0128;AVGPOST=0.9985;RSQ=0.9549;ERATE=0.0004;THETA=0.0054;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87730283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9334;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87730365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87730435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9079;ERATE=0.0003;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87730488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7639;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87730502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87730503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87730664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.994;LDAF=0.3357;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0006;THETA=0.0009;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 87730709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3373;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0005;THETA=0.0005;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 87730798 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8825;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87730936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87730976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7618;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87731278 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0100;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0003;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87731385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87731424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7546;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87731437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7607;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87731514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87731666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7449;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87731668 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87731692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9776;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87731769 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2854;AVGPOST=0.9950;RSQ=0.9906;ERATE=0.0008;THETA=0.0003;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 87731797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0027;AVGPOST=0.9985;RSQ=0.7929;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87731812 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2375;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0004;THETA=0.0004;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 87731847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1529;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 87731881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0033;AVGPOST=0.9972;RSQ=0.6920;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87731924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0296;AVGPOST=0.9993;RSQ=0.9893;ERATE=0.0003;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87731964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87732126 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7141;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87732201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87732237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87732386 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7388;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87732388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0151;AVGPOST=0.9981;RSQ=0.9447;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87732619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0381;AVGPOST=0.9996;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 87732769 rs34750413 AC A 46114 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3364;AVGPOST=0.9928;RSQ=0.9879;ERATE=0.0028;THETA=0.0004;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 87732794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4061;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87733023 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87733190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6928;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=1512;AN=2184 GT:DS:GL:BD 0.69230771 1
1 87733294 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87733346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0111;AVGPOST=0.9985;RSQ=0.9366;ERATE=0.0005;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87733368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9197;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87733438 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7113;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87733564 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5660;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87733623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87733647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87733684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5326;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87733756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0380;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 87733758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5398;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87733759 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.842;LDAF=0.0154;AVGPOST=0.9949;RSQ=0.8558;ERATE=0.0004;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87733775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8773;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87733920 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0107;AVGPOST=0.9988;RSQ=0.9532;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87733945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3306;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 87733966 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0198;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87733999 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5512;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87734136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7885;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87734317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9351;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87734454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5517;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87734478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6727;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87734581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87734617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0074;AVGPOST=0.9990;RSQ=0.9524;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87734633 . ACT A 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7898;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87734672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9899;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87734907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1545;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0003;THETA=0.0007;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 87734933 . GTTCATCA G 1400 PASS INDEL;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8670;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87734992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87735069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0078;AVGPOST=0.9983;RSQ=0.9358;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87735070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87735170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87735231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6210;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87735260 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8137;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87735304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6044;ERATE=0.0005;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87735482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87735595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9443;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87735602 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.6029;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87735666 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8203;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87735683 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9331;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87735841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9592;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87735858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87735885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4403;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87735939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87735966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5945;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87736025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87736115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.407;LDAF=0.0040;AVGPOST=0.9945;RSQ=0.5163;ERATE=0.0013;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87736224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5328;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87736298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0056;AVGPOST=0.9969;RSQ=0.7886;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87736468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8848;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87736538 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8674;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87736666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0062;AVGPOST=0.9979;RSQ=0.8759;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87736758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87736852 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87737086 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87737178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87737432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1898;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 87737564 . A AT 287 PASS INDEL;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8171;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87737733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6326;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87737824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87737929 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1997;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0006;THETA=0.0007;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 87737950 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4277;ERATE=0.0007;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87738080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8339;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87738122 . TCTTC T 80 PASS INDEL;BAVGPOST=0.997;BRSQ=0.620;LDAF=0.0040;AVGPOST=0.9942;RSQ=0.4334;ERATE=0.0014;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87738202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0756;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0008;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 87738303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0755;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 87738587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8263;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87738830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.969;LDAF=0.0766;AVGPOST=0.9929;RSQ=0.9654;ERATE=0.0006;THETA=0.0078;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 87738967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5224;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87739099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0097;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87739117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=0.9998;RSQ=0.9915;ERATE=0.0003;THETA=0.0023;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87739153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7456;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87739256 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5494;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87739379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8998;ERATE=0.0003;THETA=0.0067;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87739401 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0108;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87739404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7096;ERATE=0.0004;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87739473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87739489 . TCA T 337 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9250;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87739552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0114;AVGPOST=0.9987;RSQ=0.9531;ERATE=0.0004;THETA=0.0044;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87739644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87739904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.2597;AVGPOST=0.9834;RSQ=0.9660;ERATE=0.0006;THETA=0.0018;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 87739963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0203;AVGPOST=0.9983;RSQ=0.9666;ERATE=0.0003;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87739975 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7899;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87739999 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9381;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87740017 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8577;ERATE=0.0004;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87740228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6418;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87740234 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5951;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87740309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87740369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0086;AVGPOST=0.9986;RSQ=0.9366;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87740400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.8941;ERATE=0.0013;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87740443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0081;AVGPOST=0.9990;RSQ=0.9477;ERATE=0.0003;THETA=0.0031;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87740556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87740609 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87740684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0004;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87740750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6964;ERATE=0.0004;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87740777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87740915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5826;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87740921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0090;AVGPOST=0.9987;RSQ=0.9419;ERATE=0.0004;THETA=0.0033;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87740960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7288;ERATE=0.0004;THETA=0.0053;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87741060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4991;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87741062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4861;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87741427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5142;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87741474 . AG A 285 PASS INDEL;BAVGPOST=0.998;BRSQ=0.633;LDAF=0.0050;AVGPOST=0.9929;RSQ=0.4269;ERATE=0.0008;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87741552 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0171;AVGPOST=0.9971;RSQ=0.9357;ERATE=0.0003;THETA=0.0032;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87741632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.973;LDAF=0.5507;AVGPOST=0.9724;RSQ=0.9601;ERATE=0.0033;THETA=0.0019;AC=1208;AN=2184 GT:DS:GL:BD 0.55311358 1
1 87741775 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3499;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87741787 . GTGT G 747 PASS INDEL;BAVGPOST=0.941;BRSQ=0.478;LDAF=0.0868;AVGPOST=0.8981;RSQ=0.4777;ERATE=0.0182;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 87741938 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.827;LDAF=0.2133;AVGPOST=0.9256;RSQ=0.8314;ERATE=0.0161;THETA=0.0018;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 87741943 rs72209736 G GTGGT 758 PASS INDEL;BAVGPOST=0.970;BRSQ=0.513;LDAF=0.0516;AVGPOST=0.9432;RSQ=0.5486;ERATE=0.0071;THETA=0.0016;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 87741946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5076;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87742038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8791;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87742141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.725;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7787;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87742153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87742187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8927;ERATE=0.0007;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87742283 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87742286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0097;AVGPOST=0.9989;RSQ=0.9589;ERATE=0.0005;THETA=0.0044;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87742332 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87742354 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9826;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87742388 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1915;AVGPOST=0.9972;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 87742432 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0063;AVGPOST=0.9949;RSQ=0.6615;ERATE=0.0008;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87742471 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0114;AVGPOST=0.9945;RSQ=0.7794;ERATE=0.0009;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87742505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.523;LDAF=0.0145;AVGPOST=0.9856;RSQ=0.5856;ERATE=0.0017;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87742513 . TAAG T 2468 PASS INDEL;BAVGPOST=0.994;BRSQ=0.913;LDAF=0.0282;AVGPOST=0.9878;RSQ=0.8249;ERATE=0.0009;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 87742822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3365;AVGPOST=0.9936;RSQ=0.9901;ERATE=0.0006;THETA=0.0005;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 87742946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0403;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 87743026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7337;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87743053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6704;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87743123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8306;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87743124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87743130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7363;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87743167 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87743274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87743287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87743305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8574;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87743306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9151;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87743316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0567;AVGPOST=0.9987;RSQ=0.9904;ERATE=0.0004;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 87743480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87743492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0068;AVGPOST=0.9989;RSQ=0.9357;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87743582 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0797;AVGPOST=0.9975;RSQ=0.9876;ERATE=0.0004;THETA=0.0007;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 87743724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87743791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6489;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87743871 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.6042;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87743955 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6527;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87744172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9387;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87744182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0063;AVGPOST=0.9981;RSQ=0.8929;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87744202 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.7818;AVGPOST=0.9969;RSQ=0.9940;ERATE=0.0007;THETA=0.0004;AC=1709;AN=2184 GT:DS:GL:BD 0.78250915 1
1 87744252 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87744395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7215;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87744468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.6969;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87744596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8350;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87744635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5374;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0006;THETA=0.0005;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 87744636 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87744901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9847;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87744924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9997;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87744990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0159;AVGPOST=0.9987;RSQ=0.9720;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87744991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0073;AVGPOST=0.9994;RSQ=0.9654;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87745014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87745119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87745179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87745190 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0031;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87745203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87745373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87745422 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87745428 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87745434 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8411;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87745548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87745643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0258;AVGPOST=0.9991;RSQ=0.9828;ERATE=0.0004;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87745649 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9639;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87745782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0194;AVGPOST=0.9989;RSQ=0.9759;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87745881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87746102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0175;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87746119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87746215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0218;AVGPOST=0.9980;RSQ=0.9667;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87746331 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6519;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87746437 rs113777630 A AT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.4001;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87746437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6738;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87746462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87746463 . A AAT 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87746466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87746496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9838;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87746611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6717;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87746660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6769;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87746859 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9221;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87746873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0295;AVGPOST=0.9973;RSQ=0.9635;ERATE=0.0005;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87746920 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0036;AVGPOST=0.9970;RSQ=0.6712;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87747077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7243;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87747135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.514;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4119;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87747389 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7926;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87747398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9348;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87747413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9167;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87747524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6515;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87747561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87747676 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9425;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87747801 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87747887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87747888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87747929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87748195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.7288;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87748209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87748242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87748554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87748581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87748584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87748586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87748680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87748702 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87748775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 87748786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87748813 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6606;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87748827 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4456;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0008;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 87749007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87749035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.514;LDAF=0.0040;AVGPOST=0.9971;RSQ=0.6854;ERATE=0.0006;THETA=0.0053;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87749088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0081;AVGPOST=0.9992;RSQ=0.9600;ERATE=0.0003;THETA=0.0021;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87749259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87749567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0033;AVGPOST=0.9969;RSQ=0.6512;ERATE=0.0004;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87749635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.808;LDAF=0.0219;AVGPOST=0.9856;RSQ=0.7933;ERATE=0.0006;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87749641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87749642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8433;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87749699 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0105;AVGPOST=0.9993;RSQ=0.9726;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87749756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0109;AVGPOST=0.9979;RSQ=0.9266;ERATE=0.0006;THETA=0.0136;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87749950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87749951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9292;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87749995 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0561;AVGPOST=0.9989;RSQ=0.9919;ERATE=0.0003;THETA=0.0010;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 87750125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0203;AVGPOST=0.9995;RSQ=0.9924;ERATE=0.0003;THETA=0.0008;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87750138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87750219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87750225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87750298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0027;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87750346 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.566;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8314;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87750417 . GC G 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87750494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87750506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0087;AVGPOST=0.9988;RSQ=0.9429;ERATE=0.0004;THETA=0.0049;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87750536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87750539 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7080;ERATE=0.0006;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87750553 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87750577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3578;AVGPOST=0.9941;RSQ=0.9906;ERATE=0.0005;THETA=0.0007;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 87750607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87750611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87750626 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0348;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 87750753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9793;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87750801 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7704;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87750821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6652;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87750852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5525;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87750918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87750989 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87751072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87751075 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5589;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87751121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87751192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5448;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87751292 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8987;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87751463 . T TG 6592 PASS INDEL;BAVGPOST=0.962;BRSQ=0.932;LDAF=0.3686;AVGPOST=0.9542;RSQ=0.9267;ERATE=0.0070;THETA=0.0006;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 87751584 rs71573789 G GT 37083 PASS INDEL;BAVGPOST=0.971;BRSQ=0.952;LDAF=0.3897;AVGPOST=0.9796;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 87751585 . T TC 8790 PASS INDEL;BAVGPOST=0.967;BRSQ=0.945;LDAF=0.3832;AVGPOST=0.9747;RSQ=0.9622;ERATE=0.0008;THETA=0.0004;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 87751587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0111;AVGPOST=0.9979;RSQ=0.9222;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87751642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0254;AVGPOST=0.9975;RSQ=0.9582;ERATE=0.0004;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87751821 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7280;ERATE=0.0006;THETA=0.0058;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87752030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87752086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9435;ERATE=0.0004;THETA=0.0044;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87752133 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87752199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0438;AVGPOST=0.9990;RSQ=0.9903;ERATE=0.0005;THETA=0.0002;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 87752341 rs67140517 TG T 5868 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0437;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0007;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 87752343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87752391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0515;AVGPOST=0.9991;RSQ=0.9925;ERATE=0.0003;THETA=0.0007;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 87752497 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87752502 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87752513 . C CA 1007 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9995;RSQ=0.9713;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87752517 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3736;AVGPOST=0.9948;RSQ=0.9919;ERATE=0.0004;THETA=0.0006;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 87752626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3730;AVGPOST=0.9944;RSQ=0.9915;ERATE=0.0004;THETA=0.0008;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 87752634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8286;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87752672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8826;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87752678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0118;AVGPOST=0.9991;RSQ=0.9708;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87752697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2819;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 87752891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5750;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87752915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6674;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87753103 . AC A 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6560;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87753156 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87753187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2748;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 87753309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87753375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.9108;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87753423 . AC A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87753433 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 87753582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0759;AVGPOST=0.9972;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 87753649 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87753657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8246;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87753939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8650;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87754020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87754237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87754357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9442;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87754383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0028;AVGPOST=0.9960;RSQ=0.3987;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87754401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.4052;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87754411 . A AT 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4837;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87754490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9406;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87754505 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1438;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0002;THETA=0.0002;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 87754639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87754683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1471;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0003;THETA=0.0008;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87754761 . TG T 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87754824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87754847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5563;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87754896 . AG A 59 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0034;AVGPOST=0.9965;RSQ=0.5463;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87754997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5722;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87755111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0789;AVGPOST=0.9990;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 87755127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0123;AVGPOST=0.9983;RSQ=0.9530;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87755219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9789;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87755295 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4938;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87755296 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2541;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0005;THETA=0.0005;AC=554;AN=2184 GT:DS:GL:BD 0.25366300 0
1 87755473 . T TA 6303 PASS INDEL;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0872;AVGPOST=0.9804;RSQ=0.9149;ERATE=0.0067;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 87755585 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.955;LDAF=0.0288;AVGPOST=0.9974;RSQ=0.9651;ERATE=0.0002;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 87755664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9555;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87755677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87755777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9110;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87755980 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6980;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87756015 rs34508405 A AATC 18556 PASS INDEL;BAVGPOST=0.977;BRSQ=0.915;LDAF=0.1440;AVGPOST=0.9926;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 87756202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0750;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 87756213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87756740 . G GT 12555 PASS INDEL;BAVGPOST=0.978;BRSQ=0.961;LDAF=0.3854;AVGPOST=0.9713;RSQ=0.9580;ERATE=0.0053;THETA=0.0003;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 87756813 rs35341391 T TG 43767 PASS INDEL;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.4031;AVGPOST=0.9934;RSQ=0.9907;ERATE=0.0007;THETA=0.0002;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 87756814 . G GT 14496 PASS INDEL;BAVGPOST=0.983;BRSQ=0.970;LDAF=0.3990;AVGPOST=0.9906;RSQ=0.9871;ERATE=0.0008;THETA=0.0002;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 87756815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87756866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4023;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0004;THETA=0.0006;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 87756983 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7627;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87757026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6125;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87757049 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.7923;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87757156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1446;AVGPOST=0.9973;RSQ=0.9921;ERATE=0.0004;THETA=0.0022;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 87757287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87757293 . CA C 594 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9590;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87757315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87757658 . TTTTG T 523 PASS INDEL;BAVGPOST=0.997;BRSQ=0.759;LDAF=0.0070;AVGPOST=0.9954;RSQ=0.7280;ERATE=0.0007;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87757682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7566;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87757707 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6682;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87757715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0057;AVGPOST=0.9961;RSQ=0.7410;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87757795 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0038;AVGPOST=0.9937;RSQ=0.3445;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87757834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.680;LDAF=0.0050;AVGPOST=0.9971;RSQ=0.7740;ERATE=0.0006;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87757963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5368;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87757994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7677;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87758097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9706;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87758130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0753;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 87758146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0103;AVGPOST=0.9992;RSQ=0.9680;ERATE=0.0002;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87758174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1706;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 87758329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87758434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87758475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0098;AVGPOST=0.9993;RSQ=0.9709;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87758502 . TC T 1659 PASS INDEL;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0069;AVGPOST=0.9985;RSQ=0.9333;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87758569 . G GCT 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0036;AVGPOST=0.9962;RSQ=0.6194;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87758575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87758601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8517;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87758618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8481;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87758649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87758737 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87758739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2477;AVGPOST=0.9974;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 87758795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87758806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87758885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1463;AVGPOST=0.9994;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 87758896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87758915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.3363;ERATE=0.0004;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87758969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0073;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0002;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87759011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87759051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5913;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87759215 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2519;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 87759227 . C CT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6293;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87759560 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9283;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87759581 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9549;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87759620 . AAATTAG A 341 PASS INDEL;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8254;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87759798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87759800 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8442;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87759801 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0144;AVGPOST=0.9965;RSQ=0.9090;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87759847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6025;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87759883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0075;AVGPOST=0.9996;RSQ=0.9750;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87759909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87759930 . AAG A 1626 PASS INDEL;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0153;AVGPOST=0.9965;RSQ=0.9118;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87759933 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9675;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87759962 . T TC 209 PASS INDEL;BAVGPOST=0.997;BRSQ=0.797;LDAF=0.0113;AVGPOST=0.9912;RSQ=0.6881;ERATE=0.0010;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87759997 rs71577632 A ATGGAG 41262 PASS INDEL;BAVGPOST=0.968;BRSQ=0.922;LDAF=0.2324;AVGPOST=0.9703;RSQ=0.9448;ERATE=0.0006;THETA=0.0005;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 87760060 rs72516574 T TGGAGG 31576 PASS INDEL;BAVGPOST=0.958;BRSQ=0.880;LDAF=0.2180;AVGPOST=0.9602;RSQ=0.9168;ERATE=0.0031;THETA=0.0004;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 87760061 . G GTGGAA 25226 PASS INDEL;BAVGPOST=0.968;BRSQ=0.921;LDAF=0.2336;AVGPOST=0.9716;RSQ=0.9463;ERATE=0.0006;THETA=0.0005;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 87760065 . TTCTAG T 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6750;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87760206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0958;AVGPOST=0.9989;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 87760275 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87760282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5743;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87760310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8104;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87760328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87760338 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7875;AVGPOST=0.9963;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 87760358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87760383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7795;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87760451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2636;AVGPOST=0.9972;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 87760658 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9990;RSQ=0.9453;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87760664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5750;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87760831 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87760925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2736;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0010;THETA=0.0086;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 87760940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0067;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87760950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87760984 . TAGTC T 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87760992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87761059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9148;ERATE=0.0003;THETA=0.0061;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87761124 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.916;LDAF=0.0088;AVGPOST=0.9973;RSQ=0.8839;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87761160 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6058;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87761161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7325;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87761172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7789;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87761231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87761345 . CCTT C 3003 PASS INDEL;BAVGPOST=0.995;BRSQ=0.922;LDAF=0.0226;AVGPOST=0.9979;RSQ=0.9629;ERATE=0.0005;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87761449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7524;ERATE=0.0003;THETA=0.0062;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87761535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6947;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87761550 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3895;AVGPOST=0.9932;RSQ=0.9896;ERATE=0.0013;THETA=0.0013;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 87761618 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0285;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87761620 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5940;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87761661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8198;AVGPOST=0.9941;RSQ=0.9848;ERATE=0.0005;THETA=0.0006;AC=1793;AN=2184 GT:DS:GL:BD 0.82097071 1
1 87761666 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7111;ERATE=0.0003;THETA=0.0122;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87761759 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9372;ERATE=0.0004;THETA=0.0025;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87761991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0280;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87762002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87762077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87762104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9717;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87762140 . G GT 78 PASS INDEL;BAVGPOST=0.988;BRSQ=0.571;LDAF=0.0200;AVGPOST=0.9759;RSQ=0.5128;ERATE=0.0062;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87762184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0041;AVGPOST=0.9931;RSQ=0.3067;ERATE=0.0006;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87762333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0183;AVGPOST=0.9962;RSQ=0.9148;ERATE=0.0004;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87762402 . GT G 579 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9186;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87762538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9429;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87762577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0073;AVGPOST=0.9979;RSQ=0.9112;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87762594 . CTT C 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.656;LDAF=0.0049;AVGPOST=0.9931;RSQ=0.4155;ERATE=0.0009;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87762636 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5149;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87762738 . C CA 640 PASS INDEL;BAVGPOST=0.892;BRSQ=0.387;LDAF=0.1363;AVGPOST=0.8446;RSQ=0.4628;ERATE=0.0229;THETA=0.0005;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 87762817 . AAAAAAGAAAAG A 1120 PASS INDEL;BAVGPOST=0.990;BRSQ=0.744;LDAF=0.0249;AVGPOST=0.9887;RSQ=0.7986;ERATE=0.0010;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87762823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87762889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0221;AVGPOST=0.9996;RSQ=0.9908;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87762934 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6547;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87762936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0110;AVGPOST=0.9994;RSQ=0.9765;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87762941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6692;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87762958 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.4105;AVGPOST=0.9925;RSQ=0.9880;ERATE=0.0007;THETA=0.0005;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 87763024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0160;AVGPOST=0.9961;RSQ=0.9116;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87763032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9819;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87763052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87763270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9653;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87763290 . C CA 2425 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0221;AVGPOST=0.9996;RSQ=0.9908;ERATE=0.0004;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87763655 . CTG C 173 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3495;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87763878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7896;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87763896 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0131;AVGPOST=0.9964;RSQ=0.8973;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87764041 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0004;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87764210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87764298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9724;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87764307 . CT C 421 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9992;RSQ=0.9399;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87764360 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9785;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87764454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9754;ERATE=0.0003;THETA=0.0028;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87764543 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87764605 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3129;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0004;THETA=0.0009;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 87764769 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6364;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87764805 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4988;AVGPOST=0.9859;RSQ=0.9814;ERATE=0.0029;THETA=0.0003;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 87764834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.976;LDAF=0.1042;AVGPOST=0.9923;RSQ=0.9678;ERATE=0.0004;THETA=0.0005;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 87764900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5048;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87764945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4702;AVGPOST=0.9970;RSQ=0.9958;ERATE=0.0005;THETA=0.0002;AC=1028;AN=2184 GT:DS:GL:BD 0.47069597 0
1 87765111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87765268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1003;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 87765282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87765304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4718;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0005;THETA=0.0003;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 87765460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8066;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87765528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87765629 . AG A 1918 PASS INDEL;BAVGPOST=0.705;BRSQ=0.419;LDAF=0.3314;AVGPOST=0.7299;RSQ=0.5135;ERATE=0.0629;THETA=0.0027;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 87765883 rs55956205 GA G 65834 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.8254;AVGPOST=0.9914;RSQ=0.9797;ERATE=0.0025;THETA=0.0003;AC=1803;AN=2184 GT:DS:GL:BD 0.82554942 1
1 87765885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0002;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87766006 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8702;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87766070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87766176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8566;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87766286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6712;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87766329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87766343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87766416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0304;AVGPOST=0.9988;RSQ=0.9818;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87766427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8703;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87766428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0296;AVGPOST=0.9989;RSQ=0.9840;ERATE=0.0003;THETA=0.0001;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87766534 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9346;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87766562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.8561;AVGPOST=0.9892;RSQ=0.9728;ERATE=0.0042;THETA=0.0002;AC=1877;AN=2184 GT:DS:GL:BD 0.85943222 1
1 87766696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87766707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5257;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87766709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87766714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5964;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87766728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.924;LDAF=0.0166;AVGPOST=0.9982;RSQ=0.9501;ERATE=0.0004;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87766782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0159;AVGPOST=0.9969;RSQ=0.9341;ERATE=0.0004;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87766856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87766909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6589;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87766953 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0002;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87766973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87766978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5341;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87766983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3199;AVGPOST=0.9972;RSQ=0.9952;ERATE=0.0005;THETA=0.0015;AC=699;AN=2184 GT:DS:GL:BD 0.32005495 0
1 87766988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87767277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1645;AVGPOST=0.9966;RSQ=0.9907;ERATE=0.0007;THETA=0.0019;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 87767357 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87767438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87767536 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9022;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87767728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9370;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87767957 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87768058 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7984;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1743;AN=2184 GT:DS:GL:BD 0.79807693 1
1 87768088 . T TA 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87768339 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9706;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87768345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0002;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87768355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.975;LDAF=0.1520;AVGPOST=0.9915;RSQ=0.9772;ERATE=0.0005;THETA=0.0003;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 87768382 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.9059;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87768482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87768498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6991;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87768550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87768598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4253;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87768687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0002;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87768811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87768917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7995;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=1745;AN=2184 GT:DS:GL:BD 0.79899269 1
1 87768922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87768948 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87768963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87768973 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87769383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87769413 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.7997;AVGPOST=0.9935;RSQ=0.9862;ERATE=0.0037;THETA=0.0005;AC=1747;AN=2184 GT:DS:GL:BD 0.79990840 1
1 87769437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8858;ERATE=0.0004;THETA=0.0039;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87769549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9594;ERATE=0.0002;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87769558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87769592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.818;LDAF=0.0124;AVGPOST=0.9946;RSQ=0.8284;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87769600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1809;AVGPOST=0.9985;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 87769688 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0007;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87769756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87769923 . CT C 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87769945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6814;AVGPOST=0.9973;RSQ=0.9948;ERATE=0.0003;THETA=0.0006;AC=1489;AN=2184 GT:DS:GL:BD 0.68177658 1
1 87770068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87770193 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87770269 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5112;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87770342 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87770430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9538;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87770544 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87770580 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.5458;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87770598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87770602 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2505;AVGPOST=0.9972;RSQ=0.9936;ERATE=0.0003;THETA=0.0006;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 87770616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87770673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87770770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0978;AVGPOST=0.9983;RSQ=0.9917;ERATE=0.0004;THETA=0.0002;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 87770782 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.6761;AVGPOST=0.9946;RSQ=0.9895;ERATE=0.0011;THETA=0.0011;AC=1481;AN=2184 GT:DS:GL:BD 0.67811358 1
1 87771368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87771447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0825;AVGPOST=0.9982;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 87771453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7116;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87771469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87771542 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9635;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87771623 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9590;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87771694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5158;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87771743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0190;AVGPOST=0.9990;RSQ=0.9833;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87771810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87772140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0207;AVGPOST=0.9974;RSQ=0.9476;ERATE=0.0008;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87772191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9572;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87772395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9450;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87772432 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.5822;AVGPOST=0.9846;RSQ=0.9788;ERATE=0.0040;THETA=0.0004;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 87772605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.7901;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87772644 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87772707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7212;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87772821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6864;AVGPOST=0.9908;RSQ=0.9834;ERATE=0.0014;THETA=0.0005;AC=1506;AN=2184 GT:DS:GL:BD 0.68956041 1
1 87772875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6042;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87772939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0100;AVGPOST=0.9985;RSQ=0.9551;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87773116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87773168 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87773231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9048;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87773445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87773449 . AT A 258 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7904;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87773510 . G GT 60538 PASS INDEL;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.4828;AVGPOST=0.9818;RSQ=0.9714;ERATE=0.0046;THETA=0.0013;AC=1051;AN=2184 GT:DS:GL:BD 0.48122710 0
1 87773591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0127;AVGPOST=0.9990;RSQ=0.9683;ERATE=0.0003;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87773626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87773698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87773700 . TTC T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87773799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4813;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87774063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7022;ERATE=0.0009;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87774108 . CTCT C 42 PASS INDEL;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6058;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87774130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0137;AVGPOST=0.9982;RSQ=0.9525;ERATE=0.0006;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87774150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87774184 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.2384;AVGPOST=0.9937;RSQ=0.9876;ERATE=0.0004;THETA=0.0021;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 87774317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87774325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6678;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87774407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0065;AVGPOST=0.9992;RSQ=0.9458;ERATE=0.0004;THETA=0.0029;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87774430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87774458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87774473 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87774566 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87774568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87774711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87774793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87774811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87774892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87774955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87774967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87775055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87775280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0299;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87775309 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87775405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87775560 . G GC 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4094;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87775621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0013;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87775699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87775719 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87775722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87775759 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87776057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8676;ERATE=0.0017;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87776108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87776115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0063;AVGPOST=0.9997;RSQ=0.9810;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87776173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87776190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87776251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87776293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9806;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87776457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87776458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0804;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 87776482 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87776574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87776577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5836;AVGPOST=0.9984;RSQ=0.9980;ERATE=0.0003;THETA=0.0047;AC=1273;AN=2184 GT:DS:GL:BD 0.58287543 1
1 87776647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87776656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8866;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87776729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7378;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87776734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7386;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87776861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5763;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87776876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87777036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9661;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87777079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6463;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87777146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87777189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.4059;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87777274 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87777692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87777767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5805;AVGPOST=0.9999;RSQ=0.9999;ERATE=0.0003;THETA=0.0014;AC=1266;AN=2184 GT:DS:GL:BD 0.57967031 1
1 87777793 . T TA 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4399;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87778080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87778287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87778368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87778493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0303;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0010;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87778495 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87778551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0969;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87778591 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87778648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.970;LDAF=0.7939;AVGPOST=0.9881;RSQ=0.9728;ERATE=0.0243;THETA=0.0003;AC=1739;AN=2184 GT:DS:GL:BD 0.79624540 1
1 87778716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87778732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87778761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5285;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87779084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87779147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7085;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87779160 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87779459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87779471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0302;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87779542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87779683 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6379;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87779915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6509;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87779922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87780010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9801;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87780050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6043;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87780109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9315;ERATE=0.0003;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87780117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7139;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87780189 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87780280 rs112658215 TG T 5134 PASS INDEL;BAVGPOST=0.995;BRSQ=0.968;LDAF=0.0734;AVGPOST=0.9979;RSQ=0.9873;ERATE=0.0003;THETA=0.0006;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 87780291 . GT G 98 PASS INDEL;BAVGPOST=0.961;BRSQ=0.548;LDAF=0.0527;AVGPOST=0.9785;RSQ=0.8471;ERATE=0.0007;THETA=0.0009;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 87780296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87780340 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87780408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87780459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0015;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87780717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6736;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=1472;AN=2184 GT:DS:GL:BD 0.67399269 1
1 87780853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87780932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87781008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0643;AVGPOST=0.9965;RSQ=0.9813;ERATE=0.0003;THETA=0.0008;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 87781162 . TCG T 136 PASS INDEL;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5403;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87781178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4094;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87781371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0575;AVGPOST=0.9961;RSQ=0.9725;ERATE=0.0009;THETA=0.0004;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 87781402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87781537 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9825;AVGPOST=0.9993;RSQ=0.9819;ERATE=0.0003;THETA=0.0005;AC=2146;AN=2184 GT:DS:GL:BD 0.98260075 1
1 87781588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5342;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87781631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87781639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87781645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4739;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87781647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87781783 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2419;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0006;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 87781832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0557;AVGPOST=0.9988;RSQ=0.9919;ERATE=0.0005;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 87781945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6582;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87781998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2415;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 87782068 . A AAG 582 PASS INDEL;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0041;AVGPOST=0.9937;RSQ=0.3617;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87782283 . CTTTAT C 50180 PASS INDEL;BAVGPOST=0.969;BRSQ=0.904;LDAF=0.8090;AVGPOST=0.9213;RSQ=0.8132;ERATE=0.0088;THETA=0.0010;AC=1808;AN=2184 GT:DS:GL:BD 0.82783884 1
1 87782373 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.772;LDAF=0.0964;AVGPOST=0.9201;RSQ=0.6490;ERATE=0.0169;THETA=0.0017;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 87782392 . A AT 796 PASS INDEL;BAVGPOST=0.978;BRSQ=0.769;LDAF=0.0662;AVGPOST=0.9644;RSQ=0.7897;ERATE=0.0030;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 87782392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.545;LDAF=0.0033;AVGPOST=0.9945;RSQ=0.3367;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87782504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.2753;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87782584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0042;AVGPOST=0.9938;RSQ=0.3348;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87782595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9971;RSQ=0.7562;ERATE=0.0005;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87782629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87782748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2412;AVGPOST=0.9975;RSQ=0.9948;ERATE=0.0005;THETA=0.0002;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 87782793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8710;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87782998 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7829;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87783000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0558;AVGPOST=0.9994;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 87783172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.5160;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87783206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.6731;AVGPOST=0.9932;RSQ=0.9883;ERATE=0.0016;THETA=0.0003;AC=1471;AN=2184 GT:DS:GL:BD 0.67353481 1
1 87783207 . G GT 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0035;AVGPOST=0.9963;RSQ=0.6004;ERATE=0.0008;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87783215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2419;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0005;THETA=0.0003;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 87783691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.6039;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87783793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9739;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87783851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.1516;AVGPOST=0.9954;RSQ=0.9899;ERATE=0.0003;THETA=0.0004;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 87783888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9512;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87783943 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6082;ERATE=0.0012;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87784022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0627;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0003;THETA=0.0012;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 87784055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0028;AVGPOST=0.9967;RSQ=0.5353;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87784467 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.5908;AVGPOST=0.9918;RSQ=0.9875;ERATE=0.0008;THETA=0.0006;AC=1289;AN=2184 GT:DS:GL:BD 0.59020144 1
1 87784474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0758;AVGPOST=0.9966;RSQ=0.9789;ERATE=0.0006;THETA=0.0004;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 87784483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.1504;AVGPOST=0.9946;RSQ=0.9878;ERATE=0.0005;THETA=0.0003;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 87784492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2549;AVGPOST=0.9965;RSQ=0.9917;ERATE=0.0009;THETA=0.0005;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 87784589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0030;AVGPOST=0.9969;RSQ=0.5930;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87784594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0058;AVGPOST=0.9975;RSQ=0.8439;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87784664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5722;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87784741 rs34558645 A AT 21064 PASS INDEL;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2543;AVGPOST=0.9923;RSQ=0.9844;ERATE=0.0007;THETA=0.0003;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 87784800 . T TG 306 PASS INDEL;BAVGPOST=0.897;BRSQ=0.675;LDAF=0.1702;AVGPOST=0.9128;RSQ=0.7925;ERATE=0.0045;THETA=0.0003;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 87784804 rs3074635 A AATT 20691 PASS INDEL;BAVGPOST=0.989;BRSQ=0.972;LDAF=0.2521;AVGPOST=0.9936;RSQ=0.9865;ERATE=0.0007;THETA=0.0006;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 87784894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0055;AVGPOST=0.9968;RSQ=0.7532;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87784957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0105;AVGPOST=0.9992;RSQ=0.9657;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87785136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0061;AVGPOST=0.9974;RSQ=0.8242;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87785191 . CAAAT C 2498 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87785251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6767;AVGPOST=0.9956;RSQ=0.9919;ERATE=0.0008;THETA=0.0006;AC=1479;AN=2184 GT:DS:GL:BD 0.67719781 1
1 87785317 . CT C 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6378;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87785461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.866;LDAF=0.0161;AVGPOST=0.9987;RSQ=0.9611;ERATE=0.0004;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87785536 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6774;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=1481;AN=2184 GT:DS:GL:BD 0.67811358 1
1 87785629 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.818;LDAF=0.0155;AVGPOST=0.9957;RSQ=0.8961;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87785655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6774;AVGPOST=0.9967;RSQ=0.9937;ERATE=0.0005;THETA=0.0005;AC=1479;AN=2184 GT:DS:GL:BD 0.67719781 1
1 87785680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0055;AVGPOST=0.9964;RSQ=0.7560;ERATE=0.0006;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87785796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87785838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87785851 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4872;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87786015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8827;ERATE=0.0002;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87786140 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0077;AVGPOST=0.9987;RSQ=0.9369;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87786180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87786199 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7108;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87786203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8469;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87786236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87786288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7750;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87786319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0002;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87786416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87786420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87787023 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6906;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87787101 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4922;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87787102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87787109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.9137;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87787113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8146;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87787171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87787363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87787370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7943;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87787477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1286;AVGPOST=0.9976;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 87787518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8522;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87787632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9174;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87788268 . CAT C 126 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87788288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87788300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87788352 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9996;RSQ=0.9828;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87788459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87788479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87788553 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87788690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87788757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7008;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87788788 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87788999 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9785;ERATE=0.0002;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87789055 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9358;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87789148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0087;AVGPOST=0.9997;RSQ=0.9851;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87789174 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6125;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87789208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6458;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87789277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7822;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87789300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7807;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87789386 . A AT 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7542;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87789671 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4272;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87789678 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87789819 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8926;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87789839 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4814;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87789848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87789859 . G GT 195 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7985;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87789924 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6789;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87790112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.911;LDAF=0.1843;AVGPOST=0.9593;RSQ=0.8991;ERATE=0.0149;THETA=0.0003;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 87790180 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.915;LDAF=0.1764;AVGPOST=0.9649;RSQ=0.9131;ERATE=0.0061;THETA=0.0011;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 87790209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5963;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87790214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.921;LDAF=0.1823;AVGPOST=0.9669;RSQ=0.9155;ERATE=0.0074;THETA=0.0015;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 87790216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.955;LDAF=0.5146;AVGPOST=0.9557;RSQ=0.9441;ERATE=0.0132;THETA=0.0004;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 87790302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7844;ERATE=0.0015;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87790347 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.778;LDAF=0.0093;AVGPOST=0.9946;RSQ=0.7803;ERATE=0.0064;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87790438 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87790496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87790520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0002;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87790539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0002;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87790542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1262;AVGPOST=0.9978;RSQ=0.9935;ERATE=0.0003;THETA=0.0016;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 87790551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2229;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0003;THETA=0.0011;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 87790602 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87790617 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.896;LDAF=0.4975;AVGPOST=0.8941;RSQ=0.8717;ERATE=0.0383;THETA=0.0042;AC=1115;AN=2184 GT:DS:GL:BD 0.51053113 1
1 87790738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.776;LDAF=0.0065;AVGPOST=0.9964;RSQ=0.7742;ERATE=0.0007;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87790756 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.939;LDAF=0.6496;AVGPOST=0.9170;RSQ=0.8942;ERATE=0.0173;THETA=0.0004;AC=1448;AN=2184 GT:DS:GL:BD 0.66300368 1
1 87790781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.828;LDAF=0.0839;AVGPOST=0.9649;RSQ=0.8228;ERATE=0.0055;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 87790860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.651;LDAF=0.0155;AVGPOST=0.9870;RSQ=0.6551;ERATE=0.0015;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87790945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.867;LDAF=0.2609;AVGPOST=0.9415;RSQ=0.8896;ERATE=0.0126;THETA=0.0005;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 87791006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8588;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87791019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0101;AVGPOST=0.9968;RSQ=0.8697;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87791026 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.766;LDAF=0.1462;AVGPOST=0.9302;RSQ=0.7784;ERATE=0.0207;THETA=0.0075;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 87791035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87791086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.808;LDAF=0.1413;AVGPOST=0.9396;RSQ=0.8057;ERATE=0.0206;THETA=0.0006;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 87791109 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.635;LDAF=0.0041;AVGPOST=0.9952;RSQ=0.5597;ERATE=0.0016;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87791149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87791226 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.428;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6185;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87791245 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.818;LDAF=0.2949;AVGPOST=0.8965;RSQ=0.7872;ERATE=0.0590;THETA=0.0004;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 87791261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87791340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.964;LDAF=0.2221;AVGPOST=0.9785;RSQ=0.9570;ERATE=0.0024;THETA=0.0007;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 87791347 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0095;AVGPOST=0.9981;RSQ=0.9125;ERATE=0.0004;THETA=0.0027;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87791405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87791583 . AC A 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87791620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87791920 . AC A 77 PASS INDEL;BAVGPOST=0.994;BRSQ=0.761;LDAF=0.0156;AVGPOST=0.9879;RSQ=0.6937;ERATE=0.0052;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87791925 . TG T 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7822;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87791932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87791995 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4121;AVGPOST=0.9956;RSQ=0.9928;ERATE=0.0009;THETA=0.0004;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 87792016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9489;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87792069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87792128 . AG A 442 PASS INDEL;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.7663;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87792131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87792136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5204;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87792167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.597;LDAF=0.0101;AVGPOST=0.9872;RSQ=0.5384;ERATE=0.0047;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87792212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.517;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87792218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9639;ERATE=0.0004;THETA=0.0021;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87792237 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.801;LDAF=0.0068;AVGPOST=0.9969;RSQ=0.8258;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87792316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5421;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87792343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1921;AVGPOST=0.9981;RSQ=0.9950;ERATE=0.0007;THETA=0.0004;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 87792438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87792495 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5675;AVGPOST=0.9971;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 87792507 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.7069;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87792531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.872;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9578;ERATE=0.0003;THETA=0.0020;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87792554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87792562 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1913;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 87792629 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87792639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0015;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87792677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87792678 . AG A 21503 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1824;AVGPOST=0.9952;RSQ=0.9864;ERATE=0.0012;THETA=0.0005;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 87792721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6037;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87792733 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.894;LDAF=0.2007;AVGPOST=0.9598;RSQ=0.9106;ERATE=0.0112;THETA=0.0004;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 87792741 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87792958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87792971 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1984;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 87793042 . G GA 4926 PASS INDEL;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0427;AVGPOST=0.9964;RSQ=0.9652;ERATE=0.0003;THETA=0.0009;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 87793044 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7801;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87793130 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4411;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87793250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0033;AVGPOST=0.9968;RSQ=0.6217;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87793277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7844;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87793368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9230;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87793494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6509;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87793615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7891;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87793652 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1650;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0004;THETA=0.0008;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 87793786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.868;LDAF=0.0798;AVGPOST=0.9852;RSQ=0.9344;ERATE=0.0006;THETA=0.0003;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 87793954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.8117;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87793962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87794035 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.951;LDAF=0.1583;AVGPOST=0.9746;RSQ=0.9311;ERATE=0.0103;THETA=0.0010;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 87794061 . AC A 28 PASS INDEL;BAVGPOST=0.995;BRSQ=0.515;LDAF=0.0067;AVGPOST=0.9910;RSQ=0.4935;ERATE=0.0013;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87794345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2795;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87794362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87794525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87794713 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87794758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7557;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87794830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5613;AVGPOST=0.9980;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 87794831 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8572;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87794866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0159;AVGPOST=0.9989;RSQ=0.9676;ERATE=0.0005;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87794874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0429;AVGPOST=0.9975;RSQ=0.9748;ERATE=0.0004;THETA=0.0006;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 87794927 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87794940 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87795043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.802;LDAF=0.1028;AVGPOST=0.9505;RSQ=0.8211;ERATE=0.0054;THETA=0.0004;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 87795067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5513;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87795077 . AT A 1847 PASS INDEL;BAVGPOST=0.849;BRSQ=0.696;LDAF=0.2947;AVGPOST=0.8382;RSQ=0.7330;ERATE=0.0168;THETA=0.0006;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 87795190 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.602;LDAF=0.9514;AVGPOST=0.9516;RSQ=0.5913;ERATE=0.0064;THETA=0.0002;AC=2104;AN=2184 GT:DS:GL:BD 0.96336997 1
1 87795192 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.659;LDAF=0.0208;AVGPOST=0.9918;RSQ=0.8409;ERATE=0.0004;THETA=0.0047;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87795201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.912;LDAF=0.4646;AVGPOST=0.9429;RSQ=0.9129;ERATE=0.0119;THETA=0.0006;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 87795226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9575;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87795252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0194;AVGPOST=0.9969;RSQ=0.9339;ERATE=0.0005;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87795523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87795878 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8257;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87795895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.514;LDAF=0.0041;AVGPOST=0.9957;RSQ=0.5475;ERATE=0.0007;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87795992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.585;LDAF=0.0080;AVGPOST=0.9942;RSQ=0.7124;ERATE=0.0008;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87796036 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0596;AVGPOST=0.9980;RSQ=0.9859;ERATE=0.0004;THETA=0.0003;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 87796209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0098;AVGPOST=0.9984;RSQ=0.9415;ERATE=0.0003;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87796310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.954;LDAF=0.3934;AVGPOST=0.9717;RSQ=0.9545;ERATE=0.0040;THETA=0.0003;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 87796322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5776;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87796332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0059;AVGPOST=0.9962;RSQ=0.7309;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87796355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.975;LDAF=0.1656;AVGPOST=0.9890;RSQ=0.9724;ERATE=0.0016;THETA=0.0004;AC=361;AN=2184 GT:DS:GL:BD 0.16529304 0
1 87796379 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0080;AVGPOST=0.9976;RSQ=0.8972;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87796392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0025;AVGPOST=0.9964;RSQ=0.4644;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87796395 . AG A 264 PASS INDEL;BAVGPOST=0.989;BRSQ=0.637;LDAF=0.0115;AVGPOST=0.9894;RSQ=0.6888;ERATE=0.0005;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87796419 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.974;LDAF=0.3543;AVGPOST=0.9901;RSQ=0.9845;ERATE=0.0009;THETA=0.0027;AC=775;AN=2184 GT:DS:GL:BD 0.35485348 0
1 87796433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8751;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87796551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.7083;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87796572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8746;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87796603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0275;AVGPOST=0.9950;RSQ=0.9366;ERATE=0.0004;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87796618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87796619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7223;ERATE=0.0004;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87796700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0109;AVGPOST=0.9978;RSQ=0.9216;ERATE=0.0005;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87796764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.970;LDAF=0.1173;AVGPOST=0.9973;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 87796792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.801;LDAF=0.9840;AVGPOST=0.9943;RSQ=0.8720;ERATE=0.0004;THETA=0.0006;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 87796820 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7102;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87796991 rs35297076 GA G 14661 PASS INDEL;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1617;AVGPOST=0.9947;RSQ=0.9857;ERATE=0.0012;THETA=0.0002;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 87796998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8471;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87797007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87797042 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8458;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87797072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0053;AVGPOST=0.9963;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87797097 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0291;AVGPOST=0.9993;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 87797103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87797174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9705;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87797210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8431;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87797217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87797277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8782;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87797293 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4893;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87797340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2786;AVGPOST=0.9959;RSQ=0.9918;ERATE=0.0004;THETA=0.0027;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 87797399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87797451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9285;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87797464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0159;AVGPOST=0.9989;RSQ=0.9670;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87797469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0162;AVGPOST=0.9984;RSQ=0.9577;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87797470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87797479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.5058;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87797508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1612;AVGPOST=0.9983;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 87797779 . A ACG 31 PASS INDEL;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0069;AVGPOST=0.9922;RSQ=0.5343;ERATE=0.0024;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87797802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2786;AVGPOST=0.9960;RSQ=0.9920;ERATE=0.0005;THETA=0.0009;AC=608;AN=2184 GT:DS:GL:BD 0.27838829 0
1 87797900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7194;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87797910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9983;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87797985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9989;RSQ=0.9290;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87797997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0048;AVGPOST=0.9961;RSQ=0.7127;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87798003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87798021 . G GA 85 PASS INDEL;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7322;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87798248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.588;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87798280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6849;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87798281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0287;AVGPOST=0.9988;RSQ=0.9801;ERATE=0.0005;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87798292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.375;LDAF=0.9777;AVGPOST=0.9654;RSQ=0.3834;ERATE=0.0039;THETA=0.0003;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 87798310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.884;LDAF=0.2711;AVGPOST=0.9761;RSQ=0.9552;ERATE=0.0011;THETA=0.0004;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 87798316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.847;LDAF=0.3867;AVGPOST=0.8940;RSQ=0.8393;ERATE=0.0203;THETA=0.0006;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 87798384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9214;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87798533 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87798555 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9151;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87798598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.9984;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0003;THETA=0.0004;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 87798599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9364;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87798617 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87798655 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0581;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 87798720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87798768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.579;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8801;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87798813 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9391;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87798820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9690;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87798851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87798866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87798887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87798891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0818;AVGPOST=0.9964;RSQ=0.9801;ERATE=0.0004;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 87798903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87798939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87798961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87799010 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0195;AVGPOST=0.9969;RSQ=0.9387;ERATE=0.0004;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87799012 . A AGGAAATG 804 PASS INDEL;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8141;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87799064 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0168;AVGPOST=0.9983;RSQ=0.9640;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87799133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87799156 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87799181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87799189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9996;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87799257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6134;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87799296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87799318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87799402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7726;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87799481 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87799665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87799684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8762;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87799700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1175;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 87799704 . TG T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87799859 . CA C 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0027;AVGPOST=0.9966;RSQ=0.5129;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87799870 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1726;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 87799897 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0284;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87799952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87799974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87799976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.8238;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87799994 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4120;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 87800045 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.9027;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87800174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9545;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87800222 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0359;AVGPOST=0.9988;RSQ=0.9859;ERATE=0.0003;THETA=0.0021;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87800326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0393;AVGPOST=0.9989;RSQ=0.9894;ERATE=0.0002;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 87800532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87800536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6209;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87800545 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.7229;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87800608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8075;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87800637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5800;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87800752 . G GA 33 PASS INDEL;BAVGPOST=0.995;BRSQ=0.483;LDAF=0.0108;AVGPOST=0.9862;RSQ=0.5094;ERATE=0.0019;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87800951 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9712;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87801016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8439;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87801033 . TA T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4916;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87801160 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5729;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87801404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5146;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87801439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87801822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0694;AVGPOST=0.9969;RSQ=0.9798;ERATE=0.0004;THETA=0.0005;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 87801845 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6977;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87801868 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87801993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4284;AVGPOST=0.9928;RSQ=0.9901;ERATE=0.0006;THETA=0.0004;AC=935;AN=2184 GT:DS:GL:BD 0.42811355 0
1 87802083 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87802226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87802257 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87802282 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87802297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87802305 . A AAG 1074 PASS INDEL;BAVGPOST=0.996;BRSQ=0.842;LDAF=0.0109;AVGPOST=0.9952;RSQ=0.8428;ERATE=0.0004;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87802309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0285;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0002;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87802383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7988;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87802455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87802456 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87802525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5666;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87802529 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9449;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87802544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5446;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87802562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5785;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87802585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5262;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87802655 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.932;LDAF=0.0381;AVGPOST=0.9873;RSQ=0.8845;ERATE=0.0016;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 87802714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5904;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87802836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.837;LDAF=0.0189;AVGPOST=0.9953;RSQ=0.8967;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87802887 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0677;AVGPOST=0.9968;RSQ=0.9810;ERATE=0.0002;THETA=0.0009;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 87802952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7103;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87803129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7799;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87803230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9926;ERATE=0.0002;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87803309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0151;AVGPOST=0.9989;RSQ=0.9677;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87803533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6326;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87803679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87803826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87804037 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8175;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87804111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87804190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87804259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0101;AVGPOST=0.9983;RSQ=0.9415;ERATE=0.0002;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87804267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7417;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87804338 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8576;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87804473 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7276;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87804533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7967;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87804638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.8926;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87804685 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9691;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87804827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87804834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.8232;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87804858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6426;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87804876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1548;AVGPOST=0.9965;RSQ=0.9899;ERATE=0.0002;THETA=0.0006;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 87804923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87805077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87805135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8083;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87805160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9693;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0008;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 87805168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87805327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9917;AVGPOST=0.9998;RSQ=0.9871;ERATE=0.0003;THETA=0.0038;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 87805465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=0.9994;RSQ=0.9817;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87805578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87805681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87805686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.8033;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87805723 . A AG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4969;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87805875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9927;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87805964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5120;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87806059 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5995;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0003;THETA=0.0009;AC=1309;AN=2184 GT:DS:GL:BD 0.59935898 1
1 87806167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0145;AVGPOST=0.9960;RSQ=0.8977;ERATE=0.0005;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87806177 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6605;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87806232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0285;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87806294 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0048;AVGPOST=0.9971;RSQ=0.8012;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87806620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9812;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87806770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0114;AVGPOST=0.9996;RSQ=0.9855;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87806777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.9117;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87806831 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.9143;AVGPOST=0.9993;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 87806847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9163;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87806887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87807219 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87807242 . G GACTT 7130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0231;AVGPOST=0.9984;RSQ=0.9694;ERATE=0.0004;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87807255 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.9248;AVGPOST=0.9984;RSQ=0.9919;ERATE=0.0005;THETA=0.0007;AC=2021;AN=2184 GT:DS:GL:BD 0.92536628 1
1 87807321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87807452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87807457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0099;AVGPOST=0.9987;RSQ=0.9511;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87807894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6115;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87808261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87808307 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87808404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9150;ERATE=0.0009;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87808424 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87808438 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9693;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 87808580 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87808657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5977;AVGPOST=0.9942;RSQ=0.9924;ERATE=0.0007;THETA=0.0010;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 87808712 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87808762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6029;AVGPOST=0.9973;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 87808778 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87808874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9558;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87808935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0220;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87808964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87808996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9693;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 87809057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0228;AVGPOST=0.9990;RSQ=0.9812;ERATE=0.0004;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87809125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6505;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87809151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.939;LDAF=0.0406;AVGPOST=0.9948;RSQ=0.9441;ERATE=0.0006;THETA=0.0008;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 87809157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3121;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0004;THETA=0.0014;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 87809159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0041;AVGPOST=0.9978;RSQ=0.7765;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87809212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0214;AVGPOST=0.9995;RSQ=0.9901;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87809215 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0107;AVGPOST=0.9997;RSQ=0.9854;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87809222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9320;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87809348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8923;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87809393 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.9693;AVGPOST=0.9993;RSQ=0.9890;ERATE=0.0004;THETA=0.0009;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 87809418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87809462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87809783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9472;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87809848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0256;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87810022 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0055;AVGPOST=0.9992;RSQ=0.9436;ERATE=0.0002;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87810210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87810269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5879;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87810270 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0176;AVGPOST=0.9996;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87810427 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0051;AVGPOST=0.9978;RSQ=0.8156;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87810463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0059;AVGPOST=0.9986;RSQ=0.8996;ERATE=0.0004;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87810633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87810677 rs10529789 G GACTC 55427 PASS INDEL;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.2321;AVGPOST=0.9911;RSQ=0.9842;ERATE=0.0004;THETA=0.0008;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 87810724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87810798 . T TA 4768 PASS INDEL;BAVGPOST=0.990;BRSQ=0.808;LDAF=0.0236;AVGPOST=0.9950;RSQ=0.9169;ERATE=0.0006;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 87810854 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87810920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87811221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7954;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87811388 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9512;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87811443 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87811457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8975;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87811707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87811729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6913;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87811730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0301;AVGPOST=0.9981;RSQ=0.9760;ERATE=0.0003;THETA=0.0010;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87811842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87811960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87812108 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0002;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87812374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0002;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87812393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0004;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87812496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0002;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87812530 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87812587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0002;THETA=0.0015;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87812667 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0280;AVGPOST=0.9996;RSQ=0.9935;ERATE=0.0003;THETA=0.0009;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87812681 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87812789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87813043 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87813165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87813176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87813235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8022;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0004;THETA=0.0009;AC=1754;AN=2184 GT:DS:GL:BD 0.80311358 1
1 87813237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9998;RSQ=0.9862;ERATE=0.0002;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87813253 . G GT 248 PASS INDEL;BAVGPOST=0.993;BRSQ=0.621;LDAF=0.0130;AVGPOST=0.9876;RSQ=0.6101;ERATE=0.0034;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87813395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87813476 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0519;AVGPOST=0.9991;RSQ=0.9934;ERATE=0.0003;THETA=0.0011;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 87813628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0096;AVGPOST=0.9983;RSQ=0.9320;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87813865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0054;AVGPOST=0.9958;RSQ=0.6951;ERATE=0.0007;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87813907 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0178;AVGPOST=0.9985;RSQ=0.9627;ERATE=0.0005;THETA=0.0048;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87813914 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.967;LDAF=0.0623;AVGPOST=0.9984;RSQ=0.9889;ERATE=0.0004;THETA=0.0009;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 87813931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87813995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.801;LDAF=0.0355;AVGPOST=0.9814;RSQ=0.7965;ERATE=0.0005;THETA=0.0014;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87814024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0003;THETA=0.0011;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87814146 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0192;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0002;THETA=0.0014;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87814273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9508;ERATE=0.0002;THETA=0.0025;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87814321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87814409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0002;THETA=0.0015;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87814671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87814692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87814704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87814784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87815000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.410;LDAF=0.0085;AVGPOST=0.9915;RSQ=0.6048;ERATE=0.0009;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87815055 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0433;AVGPOST=0.9962;RSQ=0.9623;ERATE=0.0004;THETA=0.0006;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 87815076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0002;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87815091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0076;AVGPOST=0.9994;RSQ=0.9599;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87815130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0410;AVGPOST=0.9973;RSQ=0.9733;ERATE=0.0002;THETA=0.0015;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 87815135 . C CA 880 PASS INDEL;BAVGPOST=0.933;BRSQ=0.581;LDAF=0.1220;AVGPOST=0.8862;RSQ=0.5639;ERATE=0.0239;THETA=0.0010;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 87815186 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5529;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87815480 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87815525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0112;AVGPOST=0.9958;RSQ=0.8404;ERATE=0.0004;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87816005 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.829;LDAF=0.0125;AVGPOST=0.9974;RSQ=0.9263;ERATE=0.0004;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87816087 . A AT 1590 PASS INDEL;BAVGPOST=0.797;BRSQ=0.447;LDAF=0.2735;AVGPOST=0.7654;RSQ=0.5219;ERATE=0.0303;THETA=0.0006;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 87816111 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.857;BRSQ=0.485;LDAF=0.2338;AVGPOST=0.7771;RSQ=0.4863;ERATE=0.0345;THETA=0.0014;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 87816113 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.528;LDAF=0.0855;AVGPOST=0.9211;RSQ=0.6377;ERATE=0.0060;THETA=0.0009;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 87816130 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.784;BRSQ=0.549;LDAF=0.3517;AVGPOST=0.7575;RSQ=0.5638;ERATE=0.0411;THETA=0.0011;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 87816132 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.842;BRSQ=0.367;LDAF=0.8009;AVGPOST=0.7566;RSQ=0.3911;ERATE=0.0430;THETA=0.0007;AC=1920;AN=2184 GT:DS:GL:BD 0.87912089 1
1 87816134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3293;ERATE=0.0007;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87816220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.626;LDAF=0.0156;AVGPOST=0.9878;RSQ=0.7359;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87816265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0065;AVGPOST=0.9978;RSQ=0.8473;ERATE=0.0007;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87816329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8442;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87816392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0171;AVGPOST=0.9991;RSQ=0.9782;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87816507 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87816513 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.1113;AVGPOST=0.9979;RSQ=0.9906;ERATE=0.0004;THETA=0.0007;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 87816697 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.7183;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87816702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0002;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87817018 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7106;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87817128 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0337;AVGPOST=0.9973;RSQ=0.9698;ERATE=0.0003;THETA=0.0010;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 87817131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0469;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0002;THETA=0.0007;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 87817215 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9178;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87817332 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0002;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87817549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0002;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87817611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87817616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87817865 . G GA 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5779;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87817891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7676;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87817908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87817933 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9627;ERATE=0.0002;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87817960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87818059 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4698;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87818060 . C CA 144 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5323;ERATE=0.0007;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87818104 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4856;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87818364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9302;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87818399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8362;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87818463 rs113284189 T TTAAA 48773 PASS INDEL;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.3239;AVGPOST=0.9921;RSQ=0.9879;ERATE=0.0008;THETA=0.0007;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 87818491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87818592 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.6704;ERATE=0.0007;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87818640 . T TA 203 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7661;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87818640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87818689 rs67415808 CT C 93943 PASS INDEL;BAVGPOST=0.981;BRSQ=0.912;LDAF=0.9068;AVGPOST=0.9891;RSQ=0.9504;ERATE=0.0005;THETA=0.0008;AC=1978;AN=2184 GT:DS:GL:BD 0.90567768 1
1 87818799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0471;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 87818830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5817;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87818870 . TG T 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87818908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4522;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87818910 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0321;AVGPOST=0.9956;RSQ=0.9509;ERATE=0.0005;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 87818913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87818999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0051;AVGPOST=0.9952;RSQ=0.6369;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87819198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0190;AVGPOST=0.9984;RSQ=0.9630;ERATE=0.0005;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87819203 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0190;AVGPOST=0.9984;RSQ=0.9646;ERATE=0.0003;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87819358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0056;AVGPOST=0.9961;RSQ=0.7517;ERATE=0.0004;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87819393 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9920;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87819419 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9330;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87819428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87819672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87819706 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87819755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87819789 . G GA 34 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7119;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87820082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87820166 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0318;AVGPOST=0.9995;RSQ=0.9923;ERATE=0.0003;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 87820220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87820240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8292;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87820356 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9733;ERATE=0.0002;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87820438 . CCA C 14460 PASS INDEL;BAVGPOST=0.976;BRSQ=0.933;LDAF=0.1968;AVGPOST=0.9587;RSQ=0.9077;ERATE=0.0077;THETA=0.0018;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 87820796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.961;LDAF=0.6094;AVGPOST=0.9674;RSQ=0.9548;ERATE=0.0079;THETA=0.0005;AC=1346;AN=2184 GT:DS:GL:BD 0.61630034 1
1 87820827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4579;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87820978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5942;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87820983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.8115;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87821000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87821006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5538;ERATE=0.0004;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87821026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.960;LDAF=0.1801;AVGPOST=0.9916;RSQ=0.9820;ERATE=0.0006;THETA=0.0001;AC=393;AN=2184 GT:DS:GL:BD 0.17994505 0
1 87821072 . G GC 5320 PASS INDEL;BAVGPOST=0.978;BRSQ=0.950;LDAF=0.2338;AVGPOST=0.9837;RSQ=0.9688;ERATE=0.0018;THETA=0.0005;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 87821077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.5778;ERATE=0.0006;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87821153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5388;ERATE=0.0008;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87821157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4871;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87821167 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0057;AVGPOST=0.9975;RSQ=0.8046;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87821172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2332;AVGPOST=0.9972;RSQ=0.9939;ERATE=0.0006;THETA=0.0006;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 87821187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5357;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87821359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2371;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 87821399 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0169;AVGPOST=0.9952;RSQ=0.8910;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87821738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5248;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87821775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7576;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87821825 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6969;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87821855 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0571;AVGPOST=0.9982;RSQ=0.9876;ERATE=0.0005;THETA=0.0003;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 87821898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2371;AVGPOST=0.9948;RSQ=0.9897;ERATE=0.0013;THETA=0.0009;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 87821952 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8671;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87821986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5316;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87822006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2348;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0008;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 87822220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7931;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87822280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2279;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 87822419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0114;AVGPOST=0.9949;RSQ=0.8274;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87822466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8695;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87822904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4563;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87823006 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87823096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6922;AVGPOST=0.9962;RSQ=0.9927;ERATE=0.0005;THETA=0.0009;AC=1513;AN=2184 GT:DS:GL:BD 0.69276559 1
1 87823119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.526;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4020;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87823164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.627;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5948;ERATE=0.0005;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87823232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.905;LDAF=0.0194;AVGPOST=0.9948;RSQ=0.8986;ERATE=0.0005;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87823290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87823353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.4774;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87823371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87823391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87823515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4876;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87823519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2238;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 87823538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2283;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 87823587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5434;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87823683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87823761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2272;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 87823923 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87823961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87824001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1806;AVGPOST=0.9941;RSQ=0.9887;ERATE=0.0106;THETA=0.0004;AC=392;AN=2184 GT:DS:GL:BD 0.17948718 0
1 87824072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5313;ERATE=0.0010;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87824195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1695;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0015;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 87824314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87824402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6015;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87824407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87824423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87824437 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1684;AVGPOST=0.9985;RSQ=0.9966;ERATE=0.0003;THETA=0.0023;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 87824512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9549;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87824562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5011;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87824878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9516;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87824952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9407;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87825034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8469;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87825170 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7575;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87825266 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.6933;AVGPOST=0.9979;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=1514;AN=2184 GT:DS:GL:BD 0.69322342 1
1 87825275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87825330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4955;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87825475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.9250;AVGPOST=0.9971;RSQ=0.9833;ERATE=0.0006;THETA=0.0004;AC=2022;AN=2184 GT:DS:GL:BD 0.92582417 1
1 87825510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9066;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87825526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87825536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87825598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87825644 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2266;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 87825650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9963;RSQ=0.8023;ERATE=0.0008;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87825780 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0301;AVGPOST=0.9992;RSQ=0.9876;ERATE=0.0004;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87825798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87825980 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3307;AVGPOST=0.9969;RSQ=0.9956;ERATE=0.0006;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 87826070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9306;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87826175 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87826183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0131;AVGPOST=0.9992;RSQ=0.9735;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87826271 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9084;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87826308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8673;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87826337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0390;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 87826338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2510;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0004;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 87826410 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7231;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=1579;AN=2184 GT:DS:GL:BD 0.72298533 1
1 87826414 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87826488 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0721;AVGPOST=0.9988;RSQ=0.9934;ERATE=0.0004;THETA=0.0007;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 87826643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0041;AVGPOST=0.9964;RSQ=0.6284;ERATE=0.0027;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87826647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2891;AVGPOST=0.9977;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 87826717 rs71742200 C CT 855 PASS INDEL;BAVGPOST=0.767;BRSQ=0.412;LDAF=0.3230;AVGPOST=0.6618;RSQ=0.3375;ERATE=0.0565;THETA=0.0003;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 87826899 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.887;LDAF=0.1887;AVGPOST=0.9562;RSQ=0.8939;ERATE=0.0062;THETA=0.0005;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 87826920 . CACA C 115 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.7823;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87826941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0861;AVGPOST=0.9987;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 87826990 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87827006 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5142;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87827162 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9389;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87827198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3257;AVGPOST=0.9947;RSQ=0.9917;ERATE=0.0009;THETA=0.0004;AC=709;AN=2184 GT:DS:GL:BD 0.32463369 0
1 87827229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4680;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87827265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7864;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87827267 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87827337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0389;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 87827349 . AT A 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5907;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87827405 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87827456 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87827473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8510;ERATE=0.0006;THETA=0.0022;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87827524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.1336;AVGPOST=0.9929;RSQ=0.9771;ERATE=0.0011;THETA=0.0005;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 87827657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0050;AVGPOST=0.9977;RSQ=0.8256;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87827678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6812;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87827740 . G GTC 6151 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0394;AVGPOST=0.9990;RSQ=0.9888;ERATE=0.0005;THETA=0.0019;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 87827741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5549;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87827909 rs35246693 TG T 1767 PASS INDEL;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0197;AVGPOST=0.9979;RSQ=0.9583;ERATE=0.0005;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87827911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1364;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 87827919 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0191;AVGPOST=0.9991;RSQ=0.9791;ERATE=0.0005;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87828040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87828054 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8025;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87828080 . A AG 764 PASS INDEL;BAVGPOST=0.981;BRSQ=0.890;LDAF=0.0934;AVGPOST=0.9713;RSQ=0.8889;ERATE=0.0015;THETA=0.0003;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 87828123 rs78792462 G GA 12717 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0861;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 87828125 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87828248 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87828265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.1498;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87828312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0200;AVGPOST=0.9992;RSQ=0.9836;ERATE=0.0004;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87828412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6584;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87828424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0084;AVGPOST=0.9987;RSQ=0.9383;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87828497 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8107;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87828638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0866;AVGPOST=0.9979;RSQ=0.9906;ERATE=0.0005;THETA=0.0008;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 87828696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5658;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87828707 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0218;AVGPOST=0.9966;RSQ=0.9369;ERATE=0.0004;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87828745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6402;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87829029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0458;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 87829121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87829172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0460;AVGPOST=0.9988;RSQ=0.9893;ERATE=0.0005;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 87829189 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0458;AVGPOST=0.9990;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 87829198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8134;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87829239 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6637;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87829327 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9569;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87829399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1367;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0004;THETA=0.0021;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 87829572 rs35448628 GC G 13433 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1351;AVGPOST=0.9982;RSQ=0.9939;ERATE=0.0005;THETA=0.0007;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 87829610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0041;AVGPOST=0.9985;RSQ=0.8416;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87829744 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9248;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87829819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0965;AVGPOST=0.9983;RSQ=0.9939;ERATE=0.0004;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87829867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0353;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 87829880 rs72296598 GCAGA G 20031 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0857;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 87829887 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87829932 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0444;AVGPOST=0.9990;RSQ=0.9932;ERATE=0.0004;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 87830069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0251;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87830082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87830185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87830257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87830343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87830531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0860;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 87830707 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3130;AVGPOST=0.9933;RSQ=0.9891;ERATE=0.0004;THETA=0.0002;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 87830752 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5860;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87830772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87831008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9114;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87831010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87831031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5036;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87831128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9701;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87831131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7795;AVGPOST=0.9972;RSQ=0.9941;ERATE=0.0004;THETA=0.0004;AC=1704;AN=2184 GT:DS:GL:BD 0.78021979 1
1 87831175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0114;AVGPOST=0.9990;RSQ=0.9638;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87831203 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.829;LDAF=0.0079;AVGPOST=0.9976;RSQ=0.8906;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87831295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87831365 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8197;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87831435 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0908;AVGPOST=0.9989;RSQ=0.9946;ERATE=0.0004;THETA=0.0004;AC=198;AN=2184 GT:DS:GL:BD 0.09065934 0
1 87831508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0077;AVGPOST=0.9996;RSQ=0.9759;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87831625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3621;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 87831677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5621;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87831811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7601;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87831836 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6675;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87831960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.7338;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87832039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5149;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87832370 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87832439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8895;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87832440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9885;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87832491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.958;LDAF=0.0228;AVGPOST=0.9984;RSQ=0.9738;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87832510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9880;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87832513 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8684;ERATE=0.0004;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87832530 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87832605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87832767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6374;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0004;THETA=0.0008;AC=1393;AN=2184 GT:DS:GL:BD 0.63782054 1
1 87832779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87833130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9640;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87833249 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3640;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 87833370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87833575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0120;AVGPOST=0.9980;RSQ=0.9317;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87833577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8912;AVGPOST=0.9979;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 87833639 . C CTA 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4765;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87833697 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9444;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87833845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87834053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9920;AVGPOST=0.9995;RSQ=0.9707;ERATE=0.0003;THETA=0.0004;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 87834089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87834090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87834097 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2232;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 87834115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5901;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87834173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8556;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87834261 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0956;AVGPOST=0.9990;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 87834335 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3646;AVGPOST=0.9976;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 87834341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9591;ERATE=0.0009;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87834347 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.9998;AVGPOST=0.9995;RSQ=0.1996;ERATE=0.0003;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 87834436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8866;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87834477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87834547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9989;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0004;THETA=0.0002;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 87834577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4917;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87834621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87834659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87834674 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.877;LDAF=0.0157;AVGPOST=0.9949;RSQ=0.8833;ERATE=0.0011;THETA=0.0011;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87834822 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.900;LDAF=0.1093;AVGPOST=0.9755;RSQ=0.9035;ERATE=0.0038;THETA=0.0008;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 87834823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9708;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87834966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8622;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87835027 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9067;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87835082 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87835190 . TTTGTTG T 776 PASS INDEL;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0074;AVGPOST=0.9958;RSQ=0.7883;ERATE=0.0009;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87835210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9109;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87835304 . AC A 93 PASS INDEL;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8240;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87835343 rs72365568 G GCA 275 PASS INDEL;BAVGPOST=0.900;BRSQ=0.427;LDAF=0.1244;AVGPOST=0.8484;RSQ=0.4687;ERATE=0.0157;THETA=0.0003;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 87835369 . TC T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6127;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87835429 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1020;AVGPOST=0.9969;RSQ=0.9876;ERATE=0.0004;THETA=0.0005;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 87835432 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7099;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87835458 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0127;AVGPOST=0.9993;RSQ=0.9804;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87835466 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9104;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87835541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87835586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9911;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87835687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9794;ERATE=0.0003;THETA=0.0026;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87835722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4471;AVGPOST=0.9961;RSQ=0.9947;ERATE=0.0005;THETA=0.0064;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 87835803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87835884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.792;LDAF=0.0075;AVGPOST=0.9968;RSQ=0.8344;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87835908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0179;AVGPOST=0.9978;RSQ=0.9491;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87835976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9327;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87835993 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4800;AVGPOST=0.9962;RSQ=0.9937;ERATE=0.0004;THETA=0.0008;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 87836017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9810;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87836081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87836100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87836187 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87836201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5456;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87836293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9231;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87836417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87836486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5980;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87836558 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8045;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87836559 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0036;AVGPOST=0.9980;RSQ=0.7870;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87836614 . G GT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87836628 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87836824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87836842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8891;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87836919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87837118 . GA G 173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6392;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87837120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0659;AVGPOST=0.9957;RSQ=0.9727;ERATE=0.0005;THETA=0.0029;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 87837252 . T TA 242 PASS INDEL;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0067;AVGPOST=0.9915;RSQ=0.5267;ERATE=0.0011;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87837323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87837340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5861;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87837378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7844;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87837797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87837924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3362;AVGPOST=0.9940;RSQ=0.9899;ERATE=0.0005;THETA=0.0006;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 87838103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.6927;ERATE=0.0006;THETA=0.0034;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87838165 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1566;AVGPOST=0.9949;RSQ=0.9851;ERATE=0.0004;THETA=0.0021;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 87838247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9027;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87838345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87838352 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87838493 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87838616 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87838627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.4964;AVGPOST=0.9877;RSQ=0.9822;ERATE=0.0006;THETA=0.0051;AC=1089;AN=2184 GT:DS:GL:BD 0.49862638 0
1 87838648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87838740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0138;AVGPOST=0.9988;RSQ=0.9671;ERATE=0.0003;THETA=0.0104;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87838861 . TA T 297 PASS INDEL;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8853;ERATE=0.0003;THETA=0.0065;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87839013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.3285;AVGPOST=0.9635;RSQ=0.9418;ERATE=0.0008;THETA=0.0142;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 87839167 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0086;AVGPOST=0.9953;RSQ=0.7782;ERATE=0.0005;THETA=0.0169;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87839210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.1161;ERATE=0.0004;THETA=0.0250;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87839240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8945;ERATE=0.0003;THETA=0.0065;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87839504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0005;THETA=0.0285;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87839667 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0285;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87839682 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.864;LDAF=0.4322;AVGPOST=0.9196;RSQ=0.8923;ERATE=0.0019;THETA=0.0316;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 87839785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8951;ERATE=0.0003;THETA=0.0296;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87839825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7143;ERATE=0.0003;THETA=0.0189;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87839867 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5202;ERATE=0.0003;THETA=0.0085;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87840023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.832;LDAF=0.0082;AVGPOST=0.9966;RSQ=0.8450;ERATE=0.0003;THETA=0.0525;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87840035 . G GA 241 PASS INDEL;BAVGPOST=0.977;BRSQ=0.567;LDAF=0.0311;AVGPOST=0.9653;RSQ=0.5282;ERATE=0.0079;THETA=0.0161;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87840058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.775;LDAF=0.0287;AVGPOST=0.9854;RSQ=0.7879;ERATE=0.0045;THETA=0.0377;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 87840084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0228;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87840135 . T TA 145 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0003;THETA=0.0107;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87840141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5876;ERATE=0.0003;THETA=0.0172;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87840147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.867;LDAF=0.0115;AVGPOST=0.9972;RSQ=0.8942;ERATE=0.0007;THETA=0.0077;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87840246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.765;LDAF=0.0045;AVGPOST=0.9973;RSQ=0.7600;ERATE=0.0005;THETA=0.0233;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87840314 . A AC 156 PASS INDEL;BAVGPOST=0.998;BRSQ=0.736;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.5976;ERATE=0.0005;THETA=0.0201;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87840392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9313;ERATE=0.0003;THETA=0.0262;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87840673 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0340;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87840711 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6701;ERATE=0.0010;THETA=0.0322;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87840793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8720;ERATE=0.0003;THETA=0.0176;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87840883 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87840894 rs34902146 ACT A 24604 PASS INDEL;BAVGPOST=0.990;BRSQ=0.965;LDAF=0.1476;AVGPOST=0.9972;RSQ=0.9917;ERATE=0.0004;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 87840923 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5579;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87841032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87841038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5979;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 87841039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9128;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87841061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1700;AVGPOST=0.9965;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 87841063 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9983;RSQ=0.8530;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87841147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7303;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87841154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5977;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 87841274 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87841313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87841375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0148;AVGPOST=0.9982;RSQ=0.9513;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87841479 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.9917;AVGPOST=0.9967;RSQ=0.8419;ERATE=0.0003;THETA=0.0003;AC=2168;AN=2184 GT:DS:GL:BD 0.99267399 1
1 87841687 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7459;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87841735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7038;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87841773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7512;ERATE=0.0006;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87841897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0136;AVGPOST=0.9990;RSQ=0.9725;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87842001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9197;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87842020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0043;AVGPOST=0.9955;RSQ=0.5907;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87842194 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0032;AVGPOST=0.9962;RSQ=0.4551;ERATE=0.0013;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87842196 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.5994;AVGPOST=0.9934;RSQ=0.9894;ERATE=0.0008;THETA=0.0004;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 87842252 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6956;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87842315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87842336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5898;AVGPOST=0.9903;RSQ=0.9838;ERATE=0.0021;THETA=0.0013;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 87842343 . A AAG 320 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0113;AVGPOST=0.9975;RSQ=0.9087;ERATE=0.0006;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87842407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5927;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0006;THETA=0.0002;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 87842568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87842579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9191;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87842591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.992;LDAF=0.4461;AVGPOST=0.9919;RSQ=0.9878;ERATE=0.0012;THETA=0.0001;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 87842687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0069;AVGPOST=0.9966;RSQ=0.7915;ERATE=0.0007;THETA=0.0085;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87842804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9990;RSQ=0.9610;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87843028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6011;AVGPOST=0.9965;RSQ=0.9947;ERATE=0.0005;THETA=0.0010;AC=1310;AN=2184 GT:DS:GL:BD 0.59981686 1
1 87843313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6563;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87843355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0079;AVGPOST=0.9996;RSQ=0.9776;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87843414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4543;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87843415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.9209;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87843594 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0096;AVGPOST=0.9984;RSQ=0.9300;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87843595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6903;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87843757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6494;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87843807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9468;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87843966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87843998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4523;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=987;AN=2184 GT:DS:GL:BD 0.45192307 0
1 87844051 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87844088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6966;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87844106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87844111 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0042;AVGPOST=0.9982;RSQ=0.8210;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87844144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87844363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9291;ERATE=0.0004;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87844503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87844551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3924;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87844644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4477;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 87844701 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1461;AVGPOST=0.9977;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 87844956 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8573;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87845019 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9092;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87845136 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87845268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9357;ERATE=0.0009;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87845290 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9730;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87845397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5426;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87845472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.915;LDAF=0.0225;AVGPOST=0.9981;RSQ=0.9698;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87845500 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87845562 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9987;RSQ=0.9468;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87845654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87845824 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0412;AVGPOST=0.9985;RSQ=0.9855;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 87845875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87845892 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87845938 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87845974 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87846129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87846145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9992;RSQ=0.9520;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87846206 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87846300 . A AC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.5047;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87846395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7813;ERATE=0.0008;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87846401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87846431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2228;AVGPOST=0.9979;RSQ=0.9949;ERATE=0.0004;THETA=0.0007;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 87846499 . AG A 120 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87846644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87846668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87846733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87846744 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8931;AVGPOST=0.9990;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=1950;AN=2184 GT:DS:GL:BD 0.89285713 1
1 87846745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8925;AVGPOST=0.9978;RSQ=0.9907;ERATE=0.0006;THETA=0.0005;AC=1950;AN=2184 GT:DS:GL:BD 0.89285713 1
1 87846798 . CAG C 2368 PASS INDEL;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0158;AVGPOST=0.9978;RSQ=0.9461;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87846880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0095;AVGPOST=0.9995;RSQ=0.9780;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87846951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0092;AVGPOST=0.9997;RSQ=0.9856;ERATE=0.0004;THETA=0.0014;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87847072 . AT A 913 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9615;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87847079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0092;AVGPOST=0.9995;RSQ=0.9718;ERATE=0.0004;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87847230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0070;AVGPOST=0.9979;RSQ=0.8861;ERATE=0.0005;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87847432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.500;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3589;ERATE=0.0007;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87847460 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87847504 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5070;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87847587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5351;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87847595 . ACAAT A 787 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9617;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87847685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8361;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87847690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0065;AVGPOST=0.9983;RSQ=0.8925;ERATE=0.0004;THETA=0.0018;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87847730 . CA C 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87847798 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9811;ERATE=0.0004;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87847806 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87847851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0092;AVGPOST=0.9991;RSQ=0.9549;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87847871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5598;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87848007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9630;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87848189 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0070;AVGPOST=0.9974;RSQ=0.8515;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87848199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8301;ERATE=0.0006;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87848237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9562;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87848246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9154;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87848374 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6294;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87848455 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7770;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87848657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9797;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87848687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7521;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87848705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9038;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87848836 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8914;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87848846 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87848897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87848920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0176;AVGPOST=0.9994;RSQ=0.9832;ERATE=0.0004;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87848950 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0162;AVGPOST=0.9993;RSQ=0.9867;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87849138 . G GT 220 PASS INDEL;BAVGPOST=0.977;BRSQ=0.539;LDAF=0.0398;AVGPOST=0.9472;RSQ=0.4353;ERATE=0.0171;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87849138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8927;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87849173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0080;AVGPOST=0.9991;RSQ=0.9495;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87849177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87849206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9257;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87849379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87849518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0184;AVGPOST=0.9993;RSQ=0.9813;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87849519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87849635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87849638 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87849806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87849944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87849976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87850028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5607;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87850035 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8698;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87850093 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87850105 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87850205 . T TA 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6714;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87850209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6650;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87850289 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87850459 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87850530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0073;AVGPOST=0.9981;RSQ=0.8948;ERATE=0.0010;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87850630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8665;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87850655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4547;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87850658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9314;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87850676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7546;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87850692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9119;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87850766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87850770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87850817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0057;AVGPOST=0.9984;RSQ=0.8842;ERATE=0.0004;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87850827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0099;AVGPOST=0.9991;RSQ=0.9582;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87850852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0072;AVGPOST=0.9995;RSQ=0.9731;ERATE=0.0004;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87850867 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1410;AVGPOST=0.9974;RSQ=0.9932;ERATE=0.0006;THETA=0.0012;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 87850934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0462;AVGPOST=0.9984;RSQ=0.9830;ERATE=0.0005;THETA=0.0008;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 87851020 . ATTGT A 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6644;ERATE=0.0005;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87851214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87851328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0077;AVGPOST=0.9986;RSQ=0.9225;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87851335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.798;LDAF=0.0066;AVGPOST=0.9970;RSQ=0.8111;ERATE=0.0005;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87851339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0505;AVGPOST=0.9968;RSQ=0.9736;ERATE=0.0005;THETA=0.0010;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 87851340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0051;AVGPOST=0.9970;RSQ=0.7421;ERATE=0.0005;THETA=0.0018;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87851481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0540;AVGPOST=0.9975;RSQ=0.9842;ERATE=0.0004;THETA=0.0009;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 87851611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5423;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87851629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.645;LDAF=0.0137;AVGPOST=0.9848;RSQ=0.5687;ERATE=0.0059;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87851641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9190;ERATE=0.0003;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87851659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0064;AVGPOST=0.9970;RSQ=0.8391;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87851666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.854;LDAF=0.0261;AVGPOST=0.9935;RSQ=0.8976;ERATE=0.0008;THETA=0.0009;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 87851687 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0038;AVGPOST=0.9972;RSQ=0.6761;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87851810 . TTC T 1517 PASS INDEL;BAVGPOST=0.980;BRSQ=0.859;LDAF=0.0666;AVGPOST=0.9930;RSQ=0.9607;ERATE=0.0005;THETA=0.0008;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 87851889 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0104;AVGPOST=0.9988;RSQ=0.9429;ERATE=0.0005;THETA=0.0015;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87851906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0067;AVGPOST=0.9984;RSQ=0.9182;ERATE=0.0005;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87851984 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9509;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87852085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87852297 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6060;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87852354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8631;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87852484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7209;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87852537 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6583;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87852559 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87852615 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87852656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.5606;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87852733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.8252;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87852754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87852857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4045;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87852883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5109;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87852887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.650;LDAF=0.0111;AVGPOST=0.9920;RSQ=0.7308;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87852927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.819;LDAF=0.0104;AVGPOST=0.9961;RSQ=0.8466;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87853018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8016;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87853177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0832;AVGPOST=0.9989;RSQ=0.9943;ERATE=0.0003;THETA=0.0017;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 87853178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87853190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87853193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.686;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7657;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87853240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9484;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87853299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7034;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87853540 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0486;AVGPOST=0.9963;RSQ=0.9667;ERATE=0.0005;THETA=0.0013;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 87853546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87853552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87853766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5266;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87853858 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87853962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.7052;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87853982 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87854038 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87854484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5650;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87854788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0705;AVGPOST=0.9960;RSQ=0.9798;ERATE=0.0004;THETA=0.0011;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 87854834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87854867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87854883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7072;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87854939 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87854957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5754;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87855186 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87855200 . GTCA G 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0032;AVGPOST=0.9961;RSQ=0.5017;ERATE=0.0005;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87855207 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8787;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87855272 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.9134;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87855329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87855501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0261;AVGPOST=0.9981;RSQ=0.9657;ERATE=0.0004;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87855762 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87855908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0086;AVGPOST=0.9981;RSQ=0.9179;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87855934 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8010;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87856235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.8079;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87856345 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8100;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87856452 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87856488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0004;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87856577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87856609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87856690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87856705 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0310;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0002;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 87856719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8834;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87856767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.8138;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87856830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87856845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7051;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87856846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9195;ERATE=0.0012;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87856891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4247;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87856936 . ATT A 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87857026 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1644;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0005;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 87857076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8237;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87857186 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.931;LDAF=0.0260;AVGPOST=0.9945;RSQ=0.9265;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 87857384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87857393 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0076;AVGPOST=0.9990;RSQ=0.9510;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87857449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.9071;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87857470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87857485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0310;AVGPOST=0.9995;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 87857488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87857492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87857513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87857517 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0137;AVGPOST=0.9993;RSQ=0.9765;ERATE=0.0004;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87857537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0097;AVGPOST=0.9977;RSQ=0.9170;ERATE=0.0003;THETA=0.0028;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87857613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.985;LDAF=0.3823;AVGPOST=0.9894;RSQ=0.9843;ERATE=0.0008;THETA=0.0007;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 87857726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4405;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87857782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8460;ERATE=0.0003;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87857835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6786;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87857869 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.5853;AVGPOST=0.9894;RSQ=0.9864;ERATE=0.0007;THETA=0.0045;AC=1283;AN=2184 GT:DS:GL:BD 0.58745420 1
1 87857892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.7241;ERATE=0.0007;THETA=0.0037;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87857917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0082;AVGPOST=0.9979;RSQ=0.8909;ERATE=0.0004;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87857953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0455;AVGPOST=0.9991;RSQ=0.9908;ERATE=0.0003;THETA=0.0052;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 87857969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7410;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87858040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8924;ERATE=0.0003;THETA=0.0083;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87858043 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0123;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87858135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0214;AVGPOST=0.9990;RSQ=0.9823;ERATE=0.0003;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87858147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8399;ERATE=0.0003;THETA=0.0114;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87858159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.720;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7502;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87858279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8335;ERATE=0.0007;THETA=0.0145;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87858321 . CAG C 704 PASS INDEL;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0079;AVGPOST=0.9981;RSQ=0.8921;ERATE=0.0004;THETA=0.0149;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87858470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.945;LDAF=0.1625;AVGPOST=0.9757;RSQ=0.9352;ERATE=0.0071;THETA=0.0042;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 87858490 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.979;LDAF=0.5037;AVGPOST=0.9836;RSQ=0.9771;ERATE=0.0009;THETA=0.0006;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 87858636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9802;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87858651 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87858703 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0301;AVGPOST=0.9985;RSQ=0.9814;ERATE=0.0003;THETA=0.0065;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87858787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9019;ERATE=0.0004;THETA=0.0053;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87858791 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87858830 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87858851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0064;AVGPOST=0.9986;RSQ=0.9072;ERATE=0.0013;THETA=0.0033;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87858888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0191;AVGPOST=0.9990;RSQ=0.9784;ERATE=0.0003;THETA=0.0052;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87858893 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0060;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87858943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7703;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87858963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9019;ERATE=0.0006;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87858968 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.949;LDAF=0.0764;AVGPOST=0.9922;RSQ=0.9608;ERATE=0.0004;THETA=0.0019;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 87859004 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6669;ERATE=0.0005;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87859030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.9127;ERATE=0.0003;THETA=0.0049;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87859061 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0068;AVGPOST=0.9976;RSQ=0.8788;ERATE=0.0007;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87859086 . AG A 710 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9310;ERATE=0.0003;THETA=0.0072;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87859246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0245;AVGPOST=0.9972;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 87859268 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0006;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87859296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.1512;AVGPOST=0.9921;RSQ=0.9783;ERATE=0.0015;THETA=0.0016;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 87859383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87859399 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87859589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9644;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87859639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8055;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87859673 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87859799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9603;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87860002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5330;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87860034 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87860273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8337;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87860450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87860575 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87860659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.9013;ERATE=0.0003;THETA=0.0045;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87860712 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9543;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87860758 . TC T 384 PASS INDEL;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9665;ERATE=0.0003;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87860817 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8838;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87860992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0324;AVGPOST=0.9993;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 87861016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7848;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87861195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87861276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2035;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 87861283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9824;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87861314 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7541;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87861487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87861633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0676;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 87861647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6049;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87861703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8134;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87861748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0677;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 87861816 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0298;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0006;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87861904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5718;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87861923 rs34192792 TA T 11840 PASS INDEL;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2066;AVGPOST=0.9910;RSQ=0.9799;ERATE=0.0014;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 87861930 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0675;AVGPOST=0.9984;RSQ=0.9907;ERATE=0.0004;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 87861993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7143;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87862064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5469;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87862207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1219;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 87862315 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0383;AVGPOST=0.9993;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 87862382 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1738;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 87862402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5470;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87862452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.951;LDAF=0.0779;AVGPOST=0.9967;RSQ=0.9823;ERATE=0.0004;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 87862574 . CAT C 205 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87862656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.614;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7285;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87862677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5902;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87862717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1299;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 87862728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0358;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87862892 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0675;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0011;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 87862906 rs35848861 AT A 15432 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1221;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0006;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 87862926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87862975 . CA C 1229 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9993;RSQ=0.9642;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87863002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9363;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87863003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0091;AVGPOST=0.9986;RSQ=0.9345;ERATE=0.0003;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87863111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4514;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87863119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1370;AVGPOST=0.9965;RSQ=0.9874;ERATE=0.0007;THETA=0.0009;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 87863164 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.966;LDAF=0.3303;AVGPOST=0.9947;RSQ=0.9896;ERATE=0.0009;THETA=0.0013;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 87863277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8538;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87863347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.918;LDAF=0.0790;AVGPOST=0.9947;RSQ=0.9735;ERATE=0.0009;THETA=0.0019;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 87863430 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1353;AVGPOST=0.9985;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 87863562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1598;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 87863638 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0118;AVGPOST=0.9950;RSQ=0.8384;ERATE=0.0007;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87863647 . TG T 683 PASS INDEL;BAVGPOST=0.880;BRSQ=0.379;LDAF=0.1664;AVGPOST=0.8011;RSQ=0.4110;ERATE=0.0470;THETA=0.0004;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 87863679 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.5917;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87863728 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9703;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87864138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1364;AVGPOST=0.9976;RSQ=0.9926;ERATE=0.0004;THETA=0.0006;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 87864155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5980;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87864242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0332;AVGPOST=0.9991;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 87864247 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1355;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 87864290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87864427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1356;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 87864469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9059;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87864497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87864547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6678;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87864590 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1361;AVGPOST=0.9981;RSQ=0.9943;ERATE=0.0003;THETA=0.0008;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 87864612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0176;AVGPOST=0.9957;RSQ=0.9149;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87864647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87864658 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3327;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0007;THETA=0.0004;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 87864740 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87864746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9683;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87864757 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87864904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0008;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 87864911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1366;AVGPOST=0.9980;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 87865162 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9735;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87865191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87865195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7762;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87865233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0387;AVGPOST=0.9989;RSQ=0.9881;ERATE=0.0004;THETA=0.0006;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 87865307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87865345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9780;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87865396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1355;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 87865423 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9994;RSQ=0.9929;ERATE=0.0003;THETA=0.0012;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 87865532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1356;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0004;THETA=0.0011;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 87865583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1302;AVGPOST=0.9983;RSQ=0.9940;ERATE=0.0004;THETA=0.0151;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 87865612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9857;ERATE=0.0003;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87865733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6180;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87865957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1326;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 87866070 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9622;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87866251 . G GA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.6777;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87866336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6631;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87866692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6902;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87866697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87866918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8396;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87867038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.8491;AVGPOST=0.9931;RSQ=0.9809;ERATE=0.0012;THETA=0.0001;AC=1861;AN=2184 GT:DS:GL:BD 0.85210621 1
1 87867134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87867145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87867160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0595;AVGPOST=0.9982;RSQ=0.9872;ERATE=0.0003;THETA=0.0002;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 87867168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8152;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87867355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.9112;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87867420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.760;LDAF=0.0060;AVGPOST=0.9951;RSQ=0.6862;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87867468 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5093;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87867521 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.957;LDAF=0.0390;AVGPOST=0.9951;RSQ=0.9479;ERATE=0.0003;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 87867589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87867629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0141;AVGPOST=0.9993;RSQ=0.9804;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87867642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4657;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87867687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87867782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87867849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87867913 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87867947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8050;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87868007 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7686;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87868009 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87868238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8172;AVGPOST=0.9991;RSQ=0.9977;ERATE=0.0003;THETA=0.0001;AC=1785;AN=2184 GT:DS:GL:BD 0.81730771 1
1 87868285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87868404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87868412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8761;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87868473 . ATTG A 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5002;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87868489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87868571 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87868580 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0130;AVGPOST=0.9988;RSQ=0.9623;ERATE=0.0006;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87868619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1957;AVGPOST=0.9971;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 87868640 . AAC A 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87868653 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87868718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87868782 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0315;AVGPOST=0.9990;RSQ=0.9878;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 87868792 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0149;AVGPOST=0.9971;RSQ=0.9338;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87868816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6755;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87868819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2316;AVGPOST=0.9971;RSQ=0.9930;ERATE=0.0004;THETA=0.0004;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 87868843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8513;AVGPOST=0.9984;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=1860;AN=2184 GT:DS:GL:BD 0.85164833 1
1 87868886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87868893 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7120;ERATE=0.0008;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87869029 . G GA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4152;ERATE=0.0005;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87869115 . GC G 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4551;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87869140 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9867;AVGPOST=0.9999;RSQ=0.9950;ERATE=0.0003;THETA=0.0006;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 87869163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7346;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87869186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8096;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87869234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7567;AVGPOST=0.9979;RSQ=0.9958;ERATE=0.0007;THETA=0.0004;AC=1653;AN=2184 GT:DS:GL:BD 0.75686812 1
1 87869276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87869384 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0300;AVGPOST=0.9992;RSQ=0.9911;ERATE=0.0004;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87869473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87869521 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6362;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87869545 . G GT 253 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5060;ERATE=0.0012;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87869573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0197;AVGPOST=0.9989;RSQ=0.9779;ERATE=0.0004;THETA=0.0030;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87869718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87869959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0091;AVGPOST=0.9980;RSQ=0.9184;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87869971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.4987;AVGPOST=0.9908;RSQ=0.9872;ERATE=0.0009;THETA=0.0006;AC=1088;AN=2184 GT:DS:GL:BD 0.49816850 0
1 87869973 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.0891;AVGPOST=0.9971;RSQ=0.9857;ERATE=0.0004;THETA=0.0005;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 87870010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2975;AVGPOST=0.9927;RSQ=0.9878;ERATE=0.0013;THETA=0.0007;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 87870037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8767;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87870049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0214;AVGPOST=0.9992;RSQ=0.9884;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87870057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4775;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87870125 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87870142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87870224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87870245 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87870312 . AT A 6197 PASS INDEL;BAVGPOST=0.807;BRSQ=0.613;LDAF=0.6132;AVGPOST=0.7571;RSQ=0.5935;ERATE=0.0650;THETA=0.0007;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 87870356 rs67267546 TA T 72526 PASS INDEL;BAVGPOST=0.978;BRSQ=0.657;LDAF=0.9703;AVGPOST=0.9828;RSQ=0.7934;ERATE=0.0012;THETA=0.0003;AC=2124;AN=2184 GT:DS:GL:BD 0.97252744 1
1 87870365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5967;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87870475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0193;AVGPOST=0.9997;RSQ=0.9932;ERATE=0.0003;THETA=0.0013;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87870484 . T TC 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87870484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87870527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87870597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87870754 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8908;AVGPOST=0.9979;RSQ=0.9917;ERATE=0.0005;THETA=0.0012;AC=1947;AN=2184 GT:DS:GL:BD 0.89148355 1
1 87870802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5518;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87870935 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0109;AVGPOST=0.9985;RSQ=0.9461;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87870944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0623;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0004;THETA=0.0009;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 87870980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0553;AVGPOST=0.9990;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 87871041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8602;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87871051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87871355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0238;AVGPOST=0.9997;RSQ=0.9941;ERATE=0.0003;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 87871415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5817;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87871451 . ATAT A 211 PASS INDEL;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7793;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87871462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87871463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0550;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 87871604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87871630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87871707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87871711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6521;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87871854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87871976 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6944;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87872012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87872043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0558;AVGPOST=0.9982;RSQ=0.9865;ERATE=0.0004;THETA=0.0008;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 87872062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5506;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87872191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7345;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 87872292 . GTC G 209 PASS INDEL;BAVGPOST=0.982;BRSQ=0.648;LDAF=0.0420;AVGPOST=0.9518;RSQ=0.4962;ERATE=0.0181;THETA=0.0005;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 87872397 . GTC G 19679 PASS INDEL;BAVGPOST=0.992;BRSQ=0.361;LDAF=0.9840;AVGPOST=0.9774;RSQ=0.4686;ERATE=0.0027;THETA=0.0003;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 87872413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7038;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87872602 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.3123;AVGPOST=0.9892;RSQ=0.9829;ERATE=0.0006;THETA=0.0008;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 87872706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87872720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0157;AVGPOST=0.9984;RSQ=0.9542;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87872727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7140;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87872764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9715;AVGPOST=0.9996;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=2122;AN=2184 GT:DS:GL:BD 0.97161174 1
1 87872790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9281;ERATE=0.0003;THETA=0.0052;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87872874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0205;AVGPOST=0.9943;RSQ=0.8800;ERATE=0.0007;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87873230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0068;AVGPOST=0.9980;RSQ=0.8790;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87873253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0328;AVGPOST=0.9979;RSQ=0.9756;ERATE=0.0004;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 87873520 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87873665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0142;AVGPOST=0.9996;RSQ=0.9863;ERATE=0.0003;THETA=0.0047;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87873714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6696;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87873737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87873784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0085;AVGPOST=0.9983;RSQ=0.9083;ERATE=0.0004;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87873855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.9026;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87873881 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9005;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87873896 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87873906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7796;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87874166 . G GA 87 PASS INDEL;BAVGPOST=0.982;BRSQ=0.557;LDAF=0.0338;AVGPOST=0.9528;RSQ=0.4220;ERATE=0.0118;THETA=0.0035;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87874235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87874326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2101;AVGPOST=0.9963;RSQ=0.9906;ERATE=0.0007;THETA=0.0004;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 87874425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1743;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0007;THETA=0.0006;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 87874557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9385;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87874559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9359;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0004;THETA=0.0007;AC=2044;AN=2184 GT:DS:GL:BD 0.93589741 1
1 87874613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9459;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87874627 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8345;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87874738 . ACTTC A 136 PASS INDEL;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0072;AVGPOST=0.9936;RSQ=0.6256;ERATE=0.0029;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87874915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87875047 . GC G 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7560;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87875165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9721;AVGPOST=0.9974;RSQ=0.9645;ERATE=0.0005;THETA=0.0004;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 87875234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9358;AVGPOST=0.9993;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=2044;AN=2184 GT:DS:GL:BD 0.93589741 1
1 87875249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5695;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87875537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9368;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87875554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7295;AVGPOST=0.9962;RSQ=0.9930;ERATE=0.0006;THETA=0.0006;AC=1593;AN=2184 GT:DS:GL:BD 0.72939563 1
1 87875718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9748;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87875836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7322;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0005;THETA=0.0010;AC=1598;AN=2184 GT:DS:GL:BD 0.73168498 1
1 87875880 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87875909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3997;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 87876022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9995;RSQ=0.9891;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87876205 . CAA C 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0037;AVGPOST=0.9968;RSQ=0.6555;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87876279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1139;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 87876365 . A AT 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87876373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9987;AVGPOST=0.9974;RSQ=0.1258;ERATE=0.0008;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 87876536 rs34985293 C CAG 41889 PASS INDEL;BAVGPOST=0.969;BRSQ=0.955;LDAF=0.5035;AVGPOST=0.9779;RSQ=0.9695;ERATE=0.0023;THETA=0.0007;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 87876656 . GA G 14 PASS INDEL;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4419;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87876808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4055;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87876824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9988;RSQ=0.9586;ERATE=0.0004;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87877049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5091;AVGPOST=0.9888;RSQ=0.9846;ERATE=0.0015;THETA=0.0003;AC=1114;AN=2184 GT:DS:GL:BD 0.51007324 1
1 87877053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4264;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87877091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87877100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.3654;AVGPOST=0.9939;RSQ=0.9905;ERATE=0.0006;THETA=0.0004;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 87877304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6459;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87877380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0079;AVGPOST=0.9958;RSQ=0.7963;ERATE=0.0004;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87877511 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0120;AVGPOST=0.9966;RSQ=0.8801;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87877612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.636;LDAF=0.0070;AVGPOST=0.9940;RSQ=0.6764;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87877644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.818;LDAF=0.0214;AVGPOST=0.9932;RSQ=0.8685;ERATE=0.0005;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87877700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6106;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87877747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5296;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87877906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7347;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87877931 rs71809703 A ACC 25596 PASS INDEL;BAVGPOST=0.937;BRSQ=0.892;LDAF=0.3864;AVGPOST=0.9020;RSQ=0.8549;ERATE=0.0353;THETA=0.0006;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 87877955 rs67473149 CA C 5257 PASS INDEL;BAVGPOST=0.895;BRSQ=0.759;LDAF=0.2533;AVGPOST=0.8785;RSQ=0.7758;ERATE=0.0197;THETA=0.0004;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 87877956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87878135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87878147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4008;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0006;THETA=0.0003;AC=876;AN=2184 GT:DS:GL:BD 0.40109891 0
1 87878167 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5332;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87878285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87878307 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0192;AVGPOST=0.9999;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87878404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6111;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87878439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9141;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87878441 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8381;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87878473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5290;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87878498 . ATCTT A 46 PASS INDEL;BAVGPOST=0.997;BRSQ=0.744;LDAF=0.0080;AVGPOST=0.9937;RSQ=0.6437;ERATE=0.0030;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87878498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6432;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87878543 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3991;AVGPOST=0.9960;RSQ=0.9944;ERATE=0.0007;THETA=0.0003;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 87878617 . C CT 2399 PASS INDEL;BAVGPOST=0.959;BRSQ=0.876;LDAF=0.2021;AVGPOST=0.8949;RSQ=0.7495;ERATE=0.0124;THETA=0.0003;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 87878722 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.895;LDAF=0.1912;AVGPOST=0.9364;RSQ=0.8460;ERATE=0.0165;THETA=0.0003;AC=388;AN=2184 GT:DS:GL:BD 0.17765568 0
1 87878730 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0181;AVGPOST=0.9964;RSQ=0.9268;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87878734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0196;AVGPOST=0.9991;RSQ=0.9796;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87878763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87879073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7928;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87879351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87879373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0192;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87879423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6078;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87879552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87879767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8912;ERATE=0.0008;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87879807 rs36049245 G GT 576 PASS INDEL;BAVGPOST=0.938;BRSQ=0.530;LDAF=0.1073;AVGPOST=0.8812;RSQ=0.4665;ERATE=0.0399;THETA=0.0006;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 87879826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8779;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87879958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9092;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87879967 rs10588883 TAAG T 379 PASS INDEL;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9241;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87880009 . CT C 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3857;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87880049 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3886;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0011;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 87880330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87880345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87880495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0056;AVGPOST=0.9978;RSQ=0.8867;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87880549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7165;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87880596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0071;AVGPOST=0.9986;RSQ=0.9272;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87880621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87880646 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87880648 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87880665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87880737 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0123;AVGPOST=0.9990;RSQ=0.9705;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87880789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87880904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0073;AVGPOST=0.9992;RSQ=0.9610;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87880934 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6798;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87880965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6782;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87880980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3698;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0006;THETA=0.0004;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 87881009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0222;AVGPOST=0.9995;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87881132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87881148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2665;AVGPOST=0.9976;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 87881240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87881298 . CT C 588 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9601;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87881303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6733;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87881342 . CTCTT C 81 PASS INDEL;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0033;AVGPOST=0.9964;RSQ=0.5724;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87881361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.639;LDAF=0.0034;AVGPOST=0.9970;RSQ=0.6318;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87881486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2666;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0004;THETA=0.0005;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 87881605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7927;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87881614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2667;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 87881668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0137;AVGPOST=0.9984;RSQ=0.9564;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87881774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8804;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87881820 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8052;ERATE=0.0009;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87881886 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6261;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87881903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0176;AVGPOST=0.9967;RSQ=0.9287;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87882098 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7737;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87882118 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0243;AVGPOST=0.9994;RSQ=0.9893;ERATE=0.0004;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 87882199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0023;AVGPOST=0.9970;RSQ=0.5818;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87882288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8930;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87882328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8518;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87882355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7261;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87882574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0097;AVGPOST=0.9983;RSQ=0.9301;ERATE=0.0004;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87882681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8358;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87882733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87882782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2662;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=581;AN=2184 GT:DS:GL:BD 0.26602563 0
1 87882924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9006;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87882944 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87883045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87883101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87883184 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87883209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7696;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87883322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87883328 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87883463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87883480 . CTG C 181 PASS INDEL;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8433;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87883546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87883572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87883875 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87883908 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87883998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0955;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 87884045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87884064 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87884153 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87884198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0961;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0009;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 87884233 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2665;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 87884318 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0818;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0009;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 87884613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5720;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87884658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8308;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87884659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0304;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87884685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87884717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87884718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0307;AVGPOST=0.9998;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87884775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5762;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87884777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0164;AVGPOST=0.9990;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87884840 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1340;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 87884852 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7430;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87884945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2709;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 87884979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.913;LDAF=0.0173;AVGPOST=0.9969;RSQ=0.9188;ERATE=0.0005;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87885298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1332;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0004;THETA=0.0004;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 87885337 . C CATTT 355 PASS INDEL;BAVGPOST=0.997;BRSQ=0.817;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7137;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87885408 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0093;AVGPOST=0.9985;RSQ=0.9366;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87885427 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9990;RSQ=0.3752;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87885522 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87885571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87885577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2918;AVGPOST=0.9934;RSQ=0.9898;ERATE=0.0005;THETA=0.0003;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 87885696 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8750;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87885698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0221;AVGPOST=0.9997;RSQ=0.9929;ERATE=0.0003;THETA=0.0006;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87885859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87886113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0046;AVGPOST=0.9957;RSQ=0.6247;ERATE=0.0017;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87886361 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6503;ERATE=0.0006;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87886418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0004;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87886445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.8178;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87886490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87886601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0034;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87886659 . CT C 255 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5862;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87886689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.3933;ERATE=0.0003;THETA=0.0195;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87886907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9064;ERATE=0.0003;THETA=0.0027;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87886933 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0055;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87887028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9180;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87887079 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87887080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87887159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87887222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87887252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9183;ERATE=0.0004;THETA=0.0091;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87887296 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87887298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87887368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7828;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87887378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87887379 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0113;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87887509 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87887528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87887585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9274;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87887630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87887746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87887869 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87887940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8016;ERATE=0.0005;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87887973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7836;ERATE=0.0007;THETA=0.0047;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87888022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87888100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8582;ERATE=0.0003;THETA=0.0091;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87888102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87888106 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4969;ERATE=0.0003;THETA=0.0062;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87888181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.9079;ERATE=0.0005;THETA=0.0154;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87888385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0043;AVGPOST=0.9974;RSQ=0.7739;ERATE=0.0009;THETA=0.0034;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87888476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8218;ERATE=0.0004;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87888525 . T TA 216 PASS INDEL;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8942;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87888758 . G GA 189 PASS INDEL;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8829;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87888759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0003;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87888881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0577;AVGPOST=0.9983;RSQ=0.9873;ERATE=0.0003;THETA=0.0020;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 87888920 . A AT 1459 PASS INDEL;BAVGPOST=0.994;BRSQ=0.912;LDAF=0.0191;AVGPOST=0.9968;RSQ=0.9362;ERATE=0.0003;THETA=0.0059;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87888996 . GT G 1226 PASS INDEL;BAVGPOST=0.994;BRSQ=0.912;LDAF=0.0193;AVGPOST=0.9966;RSQ=0.9304;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87888999 . A AG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5435;ERATE=0.0006;THETA=0.0095;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87889298 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87889314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87889332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0054;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87889341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87889354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87889581 . C CT 68 PASS INDEL;BAVGPOST=0.998;BRSQ=0.442;LDAF=0.0032;AVGPOST=0.9951;RSQ=0.4236;ERATE=0.0006;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87889679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.613;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4386;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87889706 rs17838102 G GT 65 PASS INDEL;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0082;AVGPOST=0.9891;RSQ=0.5326;ERATE=0.0006;THETA=0.0051;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87889965 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0160;AVGPOST=0.9971;RSQ=0.9396;ERATE=0.0004;THETA=0.0032;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87889966 . GT G 120 PASS INDEL;BAVGPOST=0.998;BRSQ=0.656;LDAF=0.0036;AVGPOST=0.9963;RSQ=0.5790;ERATE=0.0015;THETA=0.0074;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87890128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.8728;AVGPOST=0.9929;RSQ=0.9766;ERATE=0.0005;THETA=0.0012;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 87890155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8196;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87890234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0143;AVGPOST=0.9998;RSQ=0.9927;ERATE=0.0003;THETA=0.0068;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87890235 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87890239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0006;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 87890539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87890554 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0016;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87890575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0028;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87890579 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87890671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8665;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87890673 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87890681 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1212;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0013;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 87890944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 87890946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1900;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 87890968 . T TCG 711 PASS INDEL;BAVGPOST=0.907;BRSQ=0.390;LDAF=0.2196;AVGPOST=0.7043;RSQ=0.2570;ERATE=0.0216;THETA=0.0008;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 87891036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0395;AVGPOST=0.9978;RSQ=0.9803;ERATE=0.0003;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 87891228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6853;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87891283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87891315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87891487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87891531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87891681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87891707 . T TG 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6405;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87891733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9392;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87891799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0367;AVGPOST=0.9988;RSQ=0.9894;ERATE=0.0003;THETA=0.0014;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 87891839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87891849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6263;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87891870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0373;AVGPOST=0.9993;RSQ=0.9927;ERATE=0.0003;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87891914 . TC T 1352 PASS INDEL;BAVGPOST=0.997;BRSQ=0.781;LDAF=0.0076;AVGPOST=0.9964;RSQ=0.8217;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87892079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6800;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87892094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3173;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 87892107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9686;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87892398 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87892414 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3541;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0006;THETA=0.0002;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 87892453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87892469 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3540;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0006;AC=773;AN=2184 GT:DS:GL:BD 0.35393772 0
1 87892491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6157;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87892577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3174;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0005;THETA=0.0006;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 87892781 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9730;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87892823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3161;AVGPOST=0.9964;RSQ=0.9932;ERATE=0.0007;THETA=0.0004;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 87892824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87893126 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.913;LDAF=0.0244;AVGPOST=0.9963;RSQ=0.9438;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 87893145 . AC A 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87893242 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8807;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87893243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7461;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87893300 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2673;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 87893322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87893417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3152;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0004;THETA=0.0006;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 87893418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0096;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87893460 rs112288891 TCAAA T 2410 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87893598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9810;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87893747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87893832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8276;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87893838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0042;AVGPOST=0.9978;RSQ=0.7934;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87893908 . G GA 61 PASS INDEL;BAVGPOST=0.991;BRSQ=0.506;LDAF=0.0166;AVGPOST=0.9787;RSQ=0.4817;ERATE=0.0058;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87893979 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87893996 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0041;AVGPOST=0.9995;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87894255 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7678;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87894315 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3162;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 87894449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87894490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87894709 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5449;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87894757 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6293;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=1374;AN=2184 GT:DS:GL:BD 0.62912089 1
1 87894778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87894889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8085;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87894990 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87895004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9738;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87895057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0173;AVGPOST=0.9989;RSQ=0.9719;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87895122 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3123;AVGPOST=0.9942;RSQ=0.9889;ERATE=0.0010;THETA=0.0006;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 87895242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0110;AVGPOST=0.9987;RSQ=0.9457;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87895246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9728;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87895366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3076;AVGPOST=0.9965;RSQ=0.9930;ERATE=0.0009;THETA=0.0004;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 87895475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2999;AVGPOST=0.9963;RSQ=0.9924;ERATE=0.0012;THETA=0.0006;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 87895650 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87895675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4719;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87895705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.7933;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87895768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6277;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87895883 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87895950 . TC T 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87895969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87895991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.3134;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0006;THETA=0.0006;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 87896132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6390;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87896216 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8254;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87896241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5819;AVGPOST=0.9960;RSQ=0.9942;ERATE=0.0008;THETA=0.0003;AC=1273;AN=2184 GT:DS:GL:BD 0.58287543 1
1 87896285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0012;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87896461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87896464 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5084;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87896482 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8157;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87896511 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9361;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87896521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8929;AVGPOST=0.9961;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=1951;AN=2184 GT:DS:GL:BD 0.89331502 1
1 87896594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9216;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87896645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87896753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87896791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9523;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87896819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87896934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.939;LDAF=0.0226;AVGPOST=0.9969;RSQ=0.9456;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87896944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0106;AVGPOST=0.9966;RSQ=0.8796;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87897028 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7139;AVGPOST=0.9957;RSQ=0.9916;ERATE=0.0005;THETA=0.0004;AC=1556;AN=2184 GT:DS:GL:BD 0.71245420 1
1 87897041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6524;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87897106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5314;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87897227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87897293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8780;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87897355 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7729;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87897366 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87897430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87897535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0032;AVGPOST=0.9962;RSQ=0.5466;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87897536 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0070;AVGPOST=0.9985;RSQ=0.9125;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87897538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9343;ERATE=0.0003;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87897648 . CTCTA C 267 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6611;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87897713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.611;LDAF=0.0038;AVGPOST=0.9942;RSQ=0.3878;ERATE=0.0013;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87897768 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9117;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87897872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0005;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87897923 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5828;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87898191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87898335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0233;AVGPOST=0.9969;RSQ=0.9506;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87898372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6025;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87898391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87898463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1248;AVGPOST=0.9983;RSQ=0.9943;ERATE=0.0007;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 87898522 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0166;AVGPOST=0.9979;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87898523 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9323;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87898532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87898540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8410;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87898610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7289;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87898681 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9874;ERATE=0.0003;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87898991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87899006 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87899018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87899030 . TC T 289 PASS INDEL;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6419;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87899071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0252;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0003;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87899175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87899186 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8318;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87899287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7202;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87899303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8186;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87899355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87899356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5958;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87899443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87899589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7928;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87899644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6388;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87899779 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.901;LDAF=0.0121;AVGPOST=0.9952;RSQ=0.8437;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87899838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87899848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87899946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87899958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9371;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87900003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1706;AVGPOST=0.9979;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 87900107 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2053;AVGPOST=0.9968;RSQ=0.9918;ERATE=0.0005;THETA=0.0010;AC=447;AN=2184 GT:DS:GL:BD 0.20467032 0
1 87900159 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87900209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0207;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 87900252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87900345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7439;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87900350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87900380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9235;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87900382 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87900548 . TA T 152 PASS INDEL;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8340;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87900595 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87900770 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87900805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9120;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87900977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8435;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87901197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87901215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87901264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5634;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0005;THETA=0.0003;AC=1230;AN=2184 GT:DS:GL:BD 0.56318682 1
1 87901385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0211;AVGPOST=0.9996;RSQ=0.9915;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87901415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4559;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0006;THETA=0.0002;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 87901639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4590;AVGPOST=0.9963;RSQ=0.9938;ERATE=0.0009;THETA=0.0005;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 87901695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8287;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87901799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3949;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0004;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 87901818 . G GT 337 PASS INDEL;BAVGPOST=0.994;BRSQ=0.663;LDAF=0.0125;AVGPOST=0.9854;RSQ=0.5381;ERATE=0.0044;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87901848 . AC A 210 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87901879 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9143;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87902060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.921;LDAF=0.1152;AVGPOST=0.9802;RSQ=0.9357;ERATE=0.0005;THETA=0.0006;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 87902165 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4745;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=1038;AN=2184 GT:DS:GL:BD 0.47527471 0
1 87902166 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87902309 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4850;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87902363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9276;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87902372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0498;AVGPOST=0.9991;RSQ=0.9926;ERATE=0.0004;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 87902491 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1705;AVGPOST=0.9937;RSQ=0.9813;ERATE=0.0007;THETA=0.0005;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 87902497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9345;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87902552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87902561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0174;AVGPOST=0.9997;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87902592 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6717;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87902787 . A AT 11984 PASS INDEL;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.4566;AVGPOST=0.9902;RSQ=0.9860;ERATE=0.0005;THETA=0.0003;AC=995;AN=2184 GT:DS:GL:BD 0.45558608 0
1 87903012 rs34872442 T TA 64711 PASS INDEL;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.4582;AVGPOST=0.9908;RSQ=0.9867;ERATE=0.0005;THETA=0.0004;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 87903014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0130;AVGPOST=0.9991;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87903395 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0171;AVGPOST=0.9992;RSQ=0.9796;ERATE=0.0005;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87903398 . GCATC G 174 PASS INDEL;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3244;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87903400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.964;LDAF=0.1589;AVGPOST=0.9885;RSQ=0.9709;ERATE=0.0004;THETA=0.0004;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 87903779 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0101;AVGPOST=0.9981;RSQ=0.9326;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87903805 . A ACT 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.4531;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87903880 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4778;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87903995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6250;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87904023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7277;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87904040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0489;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 87904092 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5387;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87904191 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87904227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5537;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87904351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9568;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87904690 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0038;AVGPOST=0.9973;RSQ=0.7583;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87904709 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=0.9992;RSQ=0.9798;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87904834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9963;RSQ=0.4966;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87904862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5081;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87904935 rs11312122 A AC 5150 PASS INDEL;BAVGPOST=0.979;BRSQ=0.887;LDAF=0.0994;AVGPOST=0.9656;RSQ=0.8409;ERATE=0.0075;THETA=0.0003;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 87905000 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0054;AVGPOST=0.9962;RSQ=0.7221;ERATE=0.0018;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87905003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0175;AVGPOST=0.9992;RSQ=0.9771;ERATE=0.0005;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87905053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4783;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87905161 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.869;LDAF=0.0133;AVGPOST=0.9944;RSQ=0.8335;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87905175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0020;AVGPOST=0.9967;RSQ=0.3428;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87905191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4322;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87905246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1212;AVGPOST=0.9918;RSQ=0.9708;ERATE=0.0003;THETA=0.0005;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 87905281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4558;AVGPOST=0.9957;RSQ=0.9931;ERATE=0.0007;THETA=0.0003;AC=994;AN=2184 GT:DS:GL:BD 0.45512819 0
1 87905374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7067;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87905383 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0607;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 87905557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9523;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87905564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.6937;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87905595 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4564;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0004;THETA=0.0001;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 87905737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87905750 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0115;AVGPOST=0.9979;RSQ=0.9251;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87906146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8044;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87906455 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5277;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87906524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6612;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87906584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5161;AVGPOST=0.9979;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 87906664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0178;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87906694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87906698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3168;AVGPOST=0.9971;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 87906908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6393;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87906967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87906986 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5166;AVGPOST=0.9993;RSQ=0.9989;ERATE=0.0003;THETA=0.0006;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 87907014 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.647;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9148;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87907066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.944;LDAF=0.0281;AVGPOST=0.9973;RSQ=0.9606;ERATE=0.0002;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 87907136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0292;AVGPOST=0.9994;RSQ=0.9921;ERATE=0.0002;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87907243 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8494;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87907266 . G GA 392 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87907336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5182;AVGPOST=0.9963;RSQ=0.9951;ERATE=0.0005;THETA=0.0008;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 87907400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0083;AVGPOST=0.9988;RSQ=0.9427;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87907423 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8600;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87907558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5424;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87907777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9993;RSQ=0.9671;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87907826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5578;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87907845 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9764;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87907900 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.6757;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87908077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87908119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5163;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0027;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 87908314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.9176;ERATE=0.0002;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87908342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9401;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87908518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0123;AVGPOST=0.9969;RSQ=0.8976;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87908557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9666;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87908637 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87908994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7247;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87909139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0051;AVGPOST=0.9954;RSQ=0.6798;ERATE=0.0008;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87909176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9148;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87909208 . T TG 140 PASS INDEL;BAVGPOST=0.995;BRSQ=0.652;LDAF=0.0187;AVGPOST=0.9832;RSQ=0.6704;ERATE=0.0011;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87909251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4308;AVGPOST=0.9960;RSQ=0.9954;ERATE=0.0007;THETA=0.0004;AC=940;AN=2184 GT:DS:GL:BD 0.43040293 0
1 87909345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87909352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0727;AVGPOST=0.9994;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 87909394 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87909418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6166;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87909468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6640;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87909579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6417;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87909674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7502;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87909729 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5185;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 87909762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87909772 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5193;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0006;THETA=0.0006;AC=1135;AN=2184 GT:DS:GL:BD 0.51968867 1
1 87909790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9990;RSQ=0.9729;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87909815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9137;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87909956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5185;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 87909984 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5210;AVGPOST=0.9948;RSQ=0.9935;ERATE=0.0006;THETA=0.0006;AC=1137;AN=2184 GT:DS:GL:BD 0.52060437 1
1 87910131 rs10603050 ATG A 35918 PASS INDEL;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.5134;AVGPOST=0.9870;RSQ=0.9822;ERATE=0.0017;THETA=0.0002;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 87910217 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0159;AVGPOST=0.9987;RSQ=0.9665;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87910265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0080;AVGPOST=0.9958;RSQ=0.7955;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87910326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4260;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87910359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3563;AVGPOST=0.9937;RSQ=0.9912;ERATE=0.0008;THETA=0.0005;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 87910428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9975;RSQ=0.9059;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87910493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0101;AVGPOST=0.9982;RSQ=0.9171;ERATE=0.0006;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87910594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5119;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0007;THETA=0.0005;AC=1117;AN=2184 GT:DS:GL:BD 0.51144689 1
1 87910653 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5636;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87910656 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5078;AVGPOST=0.9983;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=1108;AN=2184 GT:DS:GL:BD 0.50732601 1
1 87910810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5116;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0005;THETA=0.0002;AC=1117;AN=2184 GT:DS:GL:BD 0.51144689 1
1 87910897 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9342;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87910986 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6993;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87911102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5602;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87911145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87911147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6455;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87911242 . A AT 23768 PASS INDEL;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5362;AVGPOST=0.9972;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 87911403 rs5775072 T TC 71831 PASS INDEL;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5362;AVGPOST=0.9982;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 87911406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8387;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87911476 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87911489 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7021;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87911716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4629;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0005;THETA=0.0006;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 87911730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87911833 . GT G 44 PASS INDEL;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5291;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87911851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87911884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4647;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0003;THETA=0.0010;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 87911886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6283;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87911914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0213;AVGPOST=0.9984;RSQ=0.9737;ERATE=0.0004;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87911971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87912014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.4494;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87912052 . CT C 923 PASS INDEL;BAVGPOST=0.806;BRSQ=0.537;LDAF=0.1873;AVGPOST=0.8707;RSQ=0.7323;ERATE=0.0012;THETA=0.0009;AC=387;AN=2184 GT:DS:GL:BD 0.17719780 0
1 87912093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4635;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0018;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 87912184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87912187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5168;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87912226 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6079;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87912296 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8433;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87912308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87912337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8526;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87912451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87912523 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7865;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87912524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.685;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7887;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87912580 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.9712;AVGPOST=0.9981;RSQ=0.9750;ERATE=0.0006;THETA=0.0006;AC=2122;AN=2184 GT:DS:GL:BD 0.97161174 1
1 87912583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9970;RSQ=0.9270;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87912622 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5696;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87912657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0641;AVGPOST=0.9985;RSQ=0.9907;ERATE=0.0006;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 87912662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.901;LDAF=0.0158;AVGPOST=0.9965;RSQ=0.9186;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87912722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87912783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.735;LDAF=0.0048;AVGPOST=0.9978;RSQ=0.8028;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87912945 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4577;AVGPOST=0.9963;RSQ=0.9947;ERATE=0.0006;THETA=0.0004;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 87913071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7436;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87913110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87913113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9983;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87913167 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6319;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87913225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0627;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0002;THETA=0.0005;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 87913293 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9062;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87913300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9727;AVGPOST=0.9992;RSQ=0.9905;ERATE=0.0003;THETA=0.0015;AC=2125;AN=2184 GT:DS:GL:BD 0.97298533 1
1 87913441 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87913645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87913665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6353;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87913715 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87913834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7879;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87913914 . C CT 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6430;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87914148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.908;LDAF=0.0157;AVGPOST=0.9960;RSQ=0.8848;ERATE=0.0005;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87914313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6131;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87914352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0052;AVGPOST=0.9981;RSQ=0.8279;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87914364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0626;AVGPOST=0.9978;RSQ=0.9878;ERATE=0.0005;THETA=0.0004;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 87914455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5434;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87914544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8642;ERATE=0.0002;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87914549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87914619 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4602;AVGPOST=0.9983;RSQ=0.9975;ERATE=0.0005;THETA=0.0006;AC=1004;AN=2184 GT:DS:GL:BD 0.45970696 0
1 87914705 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4274;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0004;THETA=0.0006;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 87914873 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0058;AVGPOST=0.9990;RSQ=0.9275;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87914888 . AAC A 870 PASS INDEL;BAVGPOST=0.957;BRSQ=0.673;LDAF=0.0942;AVGPOST=0.9194;RSQ=0.5948;ERATE=0.0397;THETA=0.0006;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 87914933 . ACAT A 4037 PASS INDEL;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0201;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87914954 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5408;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87914967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4642;AVGPOST=0.9990;RSQ=0.9986;ERATE=0.0004;THETA=0.0006;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 87915030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5590;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87915060 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9104;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87915142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4160;AVGPOST=0.9983;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 87915222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4596;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0004;THETA=0.0007;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 87915253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87915308 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87915526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87915838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8324;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87915918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6658;ERATE=0.0006;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87915961 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87915980 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7059;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87916085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4598;AVGPOST=0.9983;RSQ=0.9975;ERATE=0.0005;THETA=0.0009;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 87916186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87916211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4271;AVGPOST=0.9982;RSQ=0.9974;ERATE=0.0005;THETA=0.0004;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 87916396 . A AAAG 24449 PASS INDEL;BAVGPOST=0.964;BRSQ=0.949;LDAF=0.4179;AVGPOST=0.9681;RSQ=0.9611;ERATE=0.0032;THETA=0.0004;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 87916495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9559;ERATE=0.0002;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87916530 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3095;AVGPOST=0.9940;RSQ=0.9902;ERATE=0.0005;THETA=0.0005;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 87916597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.747;LDAF=0.0075;AVGPOST=0.9963;RSQ=0.7754;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87916661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.621;LDAF=0.0098;AVGPOST=0.9917;RSQ=0.6537;ERATE=0.0024;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87916662 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8981;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87916826 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87916867 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87916909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4648;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87916947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87917105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0003;THETA=0.0066;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87917106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87917126 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9235;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87917200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5532;AVGPOST=0.9933;RSQ=0.9901;ERATE=0.0009;THETA=0.0007;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 87917243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5321;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87917259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0197;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87917383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.917;LDAF=0.0203;AVGPOST=0.9968;RSQ=0.9420;ERATE=0.0004;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87917416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0357;AVGPOST=0.9982;RSQ=0.9795;ERATE=0.0003;THETA=0.0009;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 87917421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8269;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87917553 . TA T 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6328;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87917576 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5277;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87917631 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7544;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87917763 . ATTC A 83 PASS INDEL;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.6606;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87917856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87917906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8101;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87917975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87917992 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8675;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87918043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.908;LDAF=0.8553;AVGPOST=0.9826;RSQ=0.9531;ERATE=0.0004;THETA=0.0006;AC=1874;AN=2184 GT:DS:GL:BD 0.85805863 1
1 87918181 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87918226 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.509;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.5088;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87918266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87918333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6244;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87918386 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.518;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4840;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87918497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.364;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4106;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87918563 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87918616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3060;AVGPOST=0.9937;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 87918631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0046;AVGPOST=0.9947;RSQ=0.5798;ERATE=0.0010;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87918709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9986;RSQ=0.9649;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87918760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5566;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0004;THETA=0.0013;AC=1215;AN=2184 GT:DS:GL:BD 0.55631870 1
1 87918828 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5551;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87918922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9223;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87918926 rs112654830 AAAAC A 28081 PASS INDEL;BAVGPOST=0.970;BRSQ=0.943;LDAF=0.2957;AVGPOST=0.9849;RSQ=0.9748;ERATE=0.0008;THETA=0.0003;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 87918976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5888;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87919042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87919043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0131;AVGPOST=0.9993;RSQ=0.9742;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87919098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87919230 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0124;AVGPOST=0.9995;RSQ=0.9804;ERATE=0.0002;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87919255 . TA T 1209 PASS INDEL;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0131;AVGPOST=0.9982;RSQ=0.9419;ERATE=0.0004;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87919294 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87919386 . A AG 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5876;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87919395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87919553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6204;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87919558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5830;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87919560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87919648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87919670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7948;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87919675 rs59908088 C CT 1042 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0147;AVGPOST=0.9970;RSQ=0.9111;ERATE=0.0007;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87919816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.5480;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87919854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0045;AVGPOST=0.9964;RSQ=0.6719;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87920140 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.5626;AVGPOST=0.9541;RSQ=0.9327;ERATE=0.0070;THETA=0.0002;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 87920177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0341;AVGPOST=0.9980;RSQ=0.9727;ERATE=0.0006;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 87920197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0200;AVGPOST=0.9988;RSQ=0.9739;ERATE=0.0004;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87920227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.903;LDAF=0.0206;AVGPOST=0.9946;RSQ=0.9008;ERATE=0.0005;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87920442 rs10581846 CATATAT C 2180 PASS INDEL;BAVGPOST=0.664;BRSQ=0.023;LDAF=0.7535;AVGPOST=0.6575;RSQ=0.2355;ERATE=0.0187;THETA=0.0006;AC=1858;AN=2184 GT:DS:GL:BD 0.85073262 1
1 87920462 . TATATATATATATATATA T 2689 PASS INDEL;BAVGPOST=0.632;BRSQ=0.186;LDAF=0.3001;AVGPOST=0.7602;RSQ=0.5713;ERATE=0.0100;THETA=0.0018;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 87920486 . TATATATATATATATA T 3845 PASS INDEL;BAVGPOST=0.629;BRSQ=0.230;LDAF=0.2641;AVGPOST=0.8572;RSQ=0.7456;ERATE=0.0025;THETA=0.0004;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 87920488 . TATATATATATATA T 2931 PASS INDEL;BAVGPOST=0.574;BRSQ=0.182;LDAF=0.3210;AVGPOST=0.7852;RSQ=0.6334;ERATE=0.0043;THETA=0.0005;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 87920490 . TATATATATA T 2081 PASS INDEL;BAVGPOST=0.404;BRSQ=0.051;LDAF=0.4148;AVGPOST=0.6426;RSQ=0.3762;ERATE=0.0221;THETA=0.0007;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 87920494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.456;LDAF=0.0171;AVGPOST=0.9825;RSQ=0.5705;ERATE=0.0011;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87920539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.863;LDAF=0.0181;AVGPOST=0.9953;RSQ=0.8802;ERATE=0.0007;THETA=0.0015;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87920564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.909;LDAF=0.5315;AVGPOST=0.8760;RSQ=0.8222;ERATE=0.0210;THETA=0.0005;AC=1179;AN=2184 GT:DS:GL:BD 0.53983516 1
1 87920664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8041;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87920760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7913;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87920770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6181;ERATE=0.0003;THETA=0.0037;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87920917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0356;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0002;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87921083 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7245;ERATE=0.0002;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87921138 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0002;THETA=0.0016;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 87921154 rs59746157 AC A 3928 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0358;AVGPOST=0.9990;RSQ=0.9871;ERATE=0.0004;THETA=0.0015;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87921366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87921412 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.2711;AVGPOST=0.9869;RSQ=0.9789;ERATE=0.0004;THETA=0.0030;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 87921528 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87921544 . TA T 247 PASS INDEL;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0048;AVGPOST=0.9971;RSQ=0.7461;ERATE=0.0004;THETA=0.0149;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87921569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0073;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87921574 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5789;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87921801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87921989 . A AGT 330 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0047;AVGPOST=0.9962;RSQ=0.6789;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87922012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8170;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87922049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.959;LDAF=0.2159;AVGPOST=0.9888;RSQ=0.9717;ERATE=0.0019;THETA=0.0005;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 87922229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0143;AVGPOST=0.9979;RSQ=0.9414;ERATE=0.0006;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87922363 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.4437;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87922388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.9966;AVGPOST=0.9978;RSQ=0.7810;ERATE=0.0003;THETA=0.0003;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 87922509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.2048;AVGPOST=0.9979;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 87922515 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0623;AVGPOST=0.9991;RSQ=0.9933;ERATE=0.0004;THETA=0.0002;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 87922592 . A AG 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0021;AVGPOST=0.9967;RSQ=0.3980;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87922646 . T TA 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9952;RSQ=0.3034;ERATE=0.0008;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87922648 . AT A 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.761;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7033;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87922808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6813;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=1490;AN=2184 GT:DS:GL:BD 0.68223441 1
1 87922847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87922877 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87922929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87922945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87923012 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0443;AVGPOST=0.9952;RSQ=0.9647;ERATE=0.0076;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 87923085 . GT G 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5010;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87923228 . TTATC T 3970 PASS INDEL;BAVGPOST=0.997;BRSQ=0.957;LDAF=0.0253;AVGPOST=0.9985;RSQ=0.9771;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 87923300 . C CA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6566;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87923359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87923375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87923390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87923436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5815;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87923494 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9408;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87923524 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.6543;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87923588 . AT A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87923692 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87923697 rs113365558 GC G 48302 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2888;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0006;THETA=0.0006;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 87923707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6596;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87923774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6813;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=1490;AN=2184 GT:DS:GL:BD 0.68223441 1
1 87923799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6115;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87923861 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8699;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87923904 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87923917 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7682;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87924146 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2893;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0014;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 87924161 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2886;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 87924220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3290;AVGPOST=0.9973;RSQ=0.9960;ERATE=0.0006;THETA=0.0006;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 87924241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=0.9991;RSQ=0.9861;ERATE=0.0003;THETA=0.0002;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 87924519 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87924646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6076;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87924673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8270;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87924903 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87924924 . CTG C 205 PASS INDEL;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.7132;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87925012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0383;AVGPOST=0.9982;RSQ=0.9830;ERATE=0.0003;THETA=0.0002;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 87925133 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5713;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87925307 . T TA 41 PASS INDEL;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0128;AVGPOST=0.9809;RSQ=0.4172;ERATE=0.0041;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87925488 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7562;ERATE=0.0008;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87925569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87925783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4570;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87925906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.854;LDAF=0.0233;AVGPOST=0.9953;RSQ=0.9175;ERATE=0.0006;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87925917 . G GT 56 PASS INDEL;BAVGPOST=0.987;BRSQ=0.501;LDAF=0.0271;AVGPOST=0.9638;RSQ=0.4601;ERATE=0.0083;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87925947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2885;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0003;THETA=0.0001;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 87926024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87926118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7919;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87926177 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.9152;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87926243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2150;AVGPOST=0.9973;RSQ=0.9932;ERATE=0.0004;THETA=0.0007;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 87926245 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87926257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87926278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5035;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87926304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9637;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87926351 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6475;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87926393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87926426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7478;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87926767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0247;AVGPOST=0.9990;RSQ=0.9841;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 87926796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87926933 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9706;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87926986 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8075;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=1763;AN=2184 GT:DS:GL:BD 0.80723441 1
1 87927040 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87927046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.950;LDAF=0.0562;AVGPOST=0.9936;RSQ=0.9549;ERATE=0.0007;THETA=0.0001;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 87927079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3077;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0003;THETA=0.0006;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 87927089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87927167 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8689;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87927224 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2121;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=463;AN=2184 GT:DS:GL:BD 0.21199633 0
1 87927275 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87927321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9694;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87927395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1766;AVGPOST=0.9983;RSQ=0.9951;ERATE=0.0006;THETA=0.0004;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 87927430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0181;AVGPOST=0.9993;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87927470 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87927542 rs10543433 TAAG T 26329 PASS INDEL;BAVGPOST=0.990;BRSQ=0.963;LDAF=0.1621;AVGPOST=0.9935;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 87927561 . AGAC A 4983 PASS INDEL;BAVGPOST=0.990;BRSQ=0.964;LDAF=0.1614;AVGPOST=0.9946;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 87927566 . G GA 452 PASS INDEL;BAVGPOST=0.976;BRSQ=0.551;LDAF=0.0451;AVGPOST=0.9458;RSQ=0.4862;ERATE=0.0131;THETA=0.0026;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 87927696 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87927715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87927853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0222;AVGPOST=0.9979;RSQ=0.9602;ERATE=0.0004;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87927908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0002;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87927909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0413;AVGPOST=0.9995;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 87928021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7407;AVGPOST=0.9955;RSQ=0.9911;ERATE=0.0006;THETA=0.0003;AC=1618;AN=2184 GT:DS:GL:BD 0.74084246 1
1 87928071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4507;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87928072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0647;AVGPOST=0.9992;RSQ=0.9943;ERATE=0.0003;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 87928208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9829;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87928224 . CTGG C 134 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6541;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87928237 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7430;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0004;THETA=0.0005;AC=1623;AN=2184 GT:DS:GL:BD 0.74313188 1
1 87928291 rs5742050 C CT 60082 PASS INDEL;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.4251;AVGPOST=0.9866;RSQ=0.9817;ERATE=0.0033;THETA=0.0003;AC=931;AN=2184 GT:DS:GL:BD 0.42628205 0
1 87928294 rs5745371 CATAG C 4417 PASS INDEL;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0417;AVGPOST=0.9986;RSQ=0.9829;ERATE=0.0007;THETA=0.0010;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 87928376 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5542;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87928441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2220;AVGPOST=0.9981;RSQ=0.9955;ERATE=0.0006;THETA=0.0006;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 87928601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87928686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8073;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1763;AN=2184 GT:DS:GL:BD 0.80723441 1
1 87928706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87929164 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87929277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9310;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87929321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8228;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87929701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.4312;AVGPOST=0.9940;RSQ=0.9920;ERATE=0.0016;THETA=0.0010;AC=945;AN=2184 GT:DS:GL:BD 0.43269232 0
1 87929753 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0002;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87929917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7246;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87929978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0646;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0002;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 87930047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9947;ERATE=0.0002;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87930429 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8183;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87930430 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7467;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87930498 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.839;LDAF=0.0074;AVGPOST=0.9983;RSQ=0.9095;ERATE=0.0002;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87930524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6645;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87930553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8148;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87930730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87930793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8072;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=1763;AN=2184 GT:DS:GL:BD 0.80723441 1
1 87930822 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7834;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87930932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87931061 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87931164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9772;ERATE=0.0003;THETA=0.0012;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87931174 . TAC T 22471 PASS INDEL;BAVGPOST=0.921;BRSQ=0.841;LDAF=0.6469;AVGPOST=0.8940;RSQ=0.8214;ERATE=0.0345;THETA=0.0004;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 87931218 rs72102800 ACT A 82768 PASS INDEL;BAVGPOST=0.983;BRSQ=0.961;LDAF=0.7359;AVGPOST=0.9870;RSQ=0.9757;ERATE=0.0014;THETA=0.0007;AC=1615;AN=2184 GT:DS:GL:BD 0.73946887 1
1 87931219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87931514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7830;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87931529 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.915;LDAF=0.0204;AVGPOST=0.9982;RSQ=0.9653;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87931585 . AC A 57 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0041;AVGPOST=0.9936;RSQ=0.3838;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87931674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.9220;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87931684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4559;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87931756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87931762 . A AC 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87931897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87931989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6671;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87932017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.9040;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87932059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87932064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87932210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87932271 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7202;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87932365 rs5775365 CCA C 4626 PASS INDEL;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0490;AVGPOST=0.9975;RSQ=0.9837;ERATE=0.0005;THETA=0.0018;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 87932434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87932461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87932534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6809;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87932586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87932598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0499;AVGPOST=0.9985;RSQ=0.9875;ERATE=0.0004;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 87932607 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87932759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7012;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87932962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0084;AVGPOST=0.9992;RSQ=0.9561;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87933063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5303;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87933075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87933095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7638;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87933111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4468;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87933262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87933276 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0494;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 87933528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87933567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0493;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0011;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 87933576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87933653 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7698;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87933835 . GAGA G 866 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9260;ERATE=0.0003;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87933845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0383;AVGPOST=0.9983;RSQ=0.9831;ERATE=0.0004;THETA=0.0008;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 87933989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0151;AVGPOST=0.9988;RSQ=0.9683;ERATE=0.0005;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87934005 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7931;ERATE=0.0014;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87934007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87934149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87934340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9669;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87934363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.7174;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87934429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87934478 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7721;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87934610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87934618 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.7842;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87934627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.8774;ERATE=0.0005;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87934715 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0053;AVGPOST=0.9962;RSQ=0.7624;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87934874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5858;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87934934 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87934974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0178;AVGPOST=0.9974;RSQ=0.9462;ERATE=0.0003;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87935281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87935288 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0498;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0010;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 87935307 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87935322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87935329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8162;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87935394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0298;AVGPOST=0.9993;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87935396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.3669;AVGPOST=0.9848;RSQ=0.9742;ERATE=0.0042;THETA=0.0008;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 87935397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9062;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87935415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87935436 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87935515 . CA C 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6711;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87935690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3755;AVGPOST=0.9979;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 87935794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0298;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87935895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8118;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87935938 . ACT A 854 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0199;AVGPOST=0.9980;RSQ=0.9591;ERATE=0.0004;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87936090 . CTG C 3882 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0192;AVGPOST=0.9979;RSQ=0.9564;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87936091 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.900;LDAF=0.0203;AVGPOST=0.9948;RSQ=0.8985;ERATE=0.0004;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87936139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0297;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87936177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87936374 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6805;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87936535 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7437;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87936943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87936966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8889;AVGPOST=0.9990;RSQ=0.9958;ERATE=0.0003;THETA=0.0008;AC=1941;AN=2184 GT:DS:GL:BD 0.88873625 1
1 87937012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.9548;AVGPOST=0.9985;RSQ=0.9868;ERATE=0.0003;THETA=0.0006;AC=2085;AN=2184 GT:DS:GL:BD 0.95467031 1
1 87937016 . GGTGGGTCACTTGA G 10479 PASS INDEL;BAVGPOST=0.989;BRSQ=0.904;LDAF=0.0636;AVGPOST=0.9956;RSQ=0.9707;ERATE=0.0007;THETA=0.0011;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 87937128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0150;AVGPOST=0.9972;RSQ=0.9288;ERATE=0.0004;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87937200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5402;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87937206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8754;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87937291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7898;AVGPOST=0.9963;RSQ=0.9915;ERATE=0.0008;THETA=0.0004;AC=1727;AN=2184 GT:DS:GL:BD 0.79075092 1
1 87937305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87937391 . A AT 1373 PASS INDEL;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0941;AVGPOST=0.9980;RSQ=0.9901;ERATE=0.0004;THETA=0.0008;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 87937444 . T TA 8530 PASS INDEL;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0956;AVGPOST=0.9975;RSQ=0.9891;ERATE=0.0003;THETA=0.0009;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 87937446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0951;AVGPOST=0.9986;RSQ=0.9931;ERATE=0.0003;THETA=0.0039;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 87937473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9982;RSQ=0.9579;ERATE=0.0006;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87937498 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0109;AVGPOST=0.9961;RSQ=0.8813;ERATE=0.0004;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87937506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0099;AVGPOST=0.9954;RSQ=0.8062;ERATE=0.0006;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87937642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.450;LDAF=0.0033;AVGPOST=0.9936;RSQ=0.2901;ERATE=0.0008;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87937672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0046;AVGPOST=0.9957;RSQ=0.5975;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87937690 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4322;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87937702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5205;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87937721 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.962;LDAF=0.7853;AVGPOST=0.9850;RSQ=0.9688;ERATE=0.0019;THETA=0.0008;AC=1722;AN=2184 GT:DS:GL:BD 0.78846157 1
1 87937739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87937830 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87937920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87937982 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87938111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8071;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87938147 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8945;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87938177 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7092;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0003;THETA=0.0009;AC=1548;AN=2184 GT:DS:GL:BD 0.70879120 1
1 87938217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87938237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9997;RSQ=0.9933;ERATE=0.0003;THETA=0.0012;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87938276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7811;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87938424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6074;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87938425 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8759;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87938446 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0247;AVGPOST=0.9951;RSQ=0.9147;ERATE=0.0006;THETA=0.0008;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 87938569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87938741 . CAAG C 7341 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0958;AVGPOST=0.9959;RSQ=0.9824;ERATE=0.0003;THETA=0.0007;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 87938768 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87938848 . TA T 309 PASS INDEL;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8254;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87938991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87939014 . CAAT C 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4535;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87939021 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.8164;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87939290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.944;LDAF=0.0356;AVGPOST=0.9981;RSQ=0.9806;ERATE=0.0004;THETA=0.0017;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87939302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87939313 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87939455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87939456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9992;RSQ=0.9556;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87939587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.937;LDAF=0.0285;AVGPOST=0.9979;RSQ=0.9686;ERATE=0.0003;THETA=0.0008;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87939795 . G GT 1995 PASS INDEL;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0188;AVGPOST=0.9991;RSQ=0.9787;ERATE=0.0003;THETA=0.0012;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87939817 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0042;AVGPOST=0.9974;RSQ=0.7789;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87939845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.762;LDAF=0.0050;AVGPOST=0.9968;RSQ=0.7494;ERATE=0.0011;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87939846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7845;ERATE=0.0003;THETA=0.0029;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87939847 . CCT C 43 PASS INDEL;BAVGPOST=0.998;BRSQ=0.670;LDAF=0.0051;AVGPOST=0.9950;RSQ=0.5983;ERATE=0.0007;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87939946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5260;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87939958 . CAG C 149 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7902;ERATE=0.0004;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87940051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7336;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87940118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87940206 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0653;AVGPOST=0.9986;RSQ=0.9916;ERATE=0.0003;THETA=0.0010;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 87940474 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87940488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6678;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87940528 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87940529 . TTTAC T 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87940546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0037;AVGPOST=0.9974;RSQ=0.7910;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87940559 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87940598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8523;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87940604 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87940751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.7324;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87940788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9890;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87940796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87940807 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87940856 rs11365097 GT G 2306 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0168;AVGPOST=0.9993;RSQ=0.9810;ERATE=0.0005;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87940866 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87940918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8022;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87940979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6230;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87940992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9814;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87941062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87941114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87941146 . TAGAAACCAAAAGTCA T 27906 PASS INDEL;BAVGPOST=0.975;BRSQ=0.929;LDAF=0.1980;AVGPOST=0.9712;RSQ=0.9364;ERATE=0.0035;THETA=0.0010;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 87941275 . T TC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87941447 . CCT C 254 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87941480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4991;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87941556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7286;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87941577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87941589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87941746 . TA T 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6418;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87941820 . C CT 13489 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0819;AVGPOST=0.9978;RSQ=0.9879;ERATE=0.0004;THETA=0.0007;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 87941870 . AGT A 273 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9022;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87941934 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9069;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87942065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942125 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4203;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5787;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942293 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.796;LDAF=0.0063;AVGPOST=0.9980;RSQ=0.8729;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87942301 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942411 rs112588621 C CAGCTAATAT 61510 PASS INDEL;BAVGPOST=0.959;BRSQ=0.925;LDAF=0.4307;AVGPOST=0.9570;RSQ=0.9358;ERATE=0.0060;THETA=0.0006;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 87942459 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4499;AVGPOST=0.9941;RSQ=0.9911;ERATE=0.0006;THETA=0.0005;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 87942473 . A AG 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6667;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87942512 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6307;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942562 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4373;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942578 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8741;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87942584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4509;AVGPOST=0.9969;RSQ=0.9951;ERATE=0.0005;THETA=0.0002;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 87942702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9028;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87942706 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8789;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87942711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87942717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942851 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.956;LDAF=0.0596;AVGPOST=0.9928;RSQ=0.9554;ERATE=0.0005;THETA=0.0004;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 87942907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942923 . C CA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4711;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87942982 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87943128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8325;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87943137 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9591;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87943230 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87943269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0264;AVGPOST=0.9988;RSQ=0.9834;ERATE=0.0003;THETA=0.0012;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 87943273 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5330;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87943317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9815;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87943352 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87943440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0152;AVGPOST=0.9975;RSQ=0.9409;ERATE=0.0006;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87943557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.945;LDAF=0.0566;AVGPOST=0.9945;RSQ=0.9632;ERATE=0.0003;THETA=0.0005;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 87943592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0110;AVGPOST=0.9963;RSQ=0.8760;ERATE=0.0009;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87943623 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0054;AVGPOST=0.9954;RSQ=0.7203;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87943647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87943685 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87943711 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3920;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87943731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.9062;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87943812 . TA T 39 PASS INDEL;BAVGPOST=0.988;BRSQ=0.367;LDAF=0.0205;AVGPOST=0.9687;RSQ=0.3838;ERATE=0.0067;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87943881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.905;LDAF=0.0209;AVGPOST=0.9946;RSQ=0.8956;ERATE=0.0004;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87943882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0226;AVGPOST=0.9990;RSQ=0.9799;ERATE=0.0003;THETA=0.0009;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 87943932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87943979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87944023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8334;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87944120 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9676;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87944165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2613;AVGPOST=0.9972;RSQ=0.9941;ERATE=0.0005;THETA=0.0016;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 87944295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0090;AVGPOST=0.9995;RSQ=0.9708;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87944309 . T TTG 14857 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.4526;AVGPOST=0.9949;RSQ=0.9919;ERATE=0.0005;THETA=0.0006;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 87944377 rs35100942 T TG 33190 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4533;AVGPOST=0.9941;RSQ=0.9907;ERATE=0.0007;THETA=0.0010;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 87944378 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.493;LDAF=0.0079;AVGPOST=0.9900;RSQ=0.5314;ERATE=0.0010;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87944544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0296;AVGPOST=0.9966;RSQ=0.9543;ERATE=0.0004;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 87944750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5172;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87944753 . C CAT 238 PASS INDEL;BAVGPOST=0.997;BRSQ=0.636;LDAF=0.0095;AVGPOST=0.9898;RSQ=0.5800;ERATE=0.0018;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87944805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87944938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7169;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87945002 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7246;AVGPOST=0.9944;RSQ=0.9892;ERATE=0.0004;THETA=0.0004;AC=1585;AN=2184 GT:DS:GL:BD 0.72573262 1
1 87945031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87945040 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.814;LDAF=0.0123;AVGPOST=0.9957;RSQ=0.8605;ERATE=0.0004;THETA=0.0028;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87945209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5470;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87945238 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5422;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87945288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8947;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87945392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5399;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87945393 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7935;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87945439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0036;AVGPOST=0.9990;RSQ=0.8768;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87945469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.541;LDAF=0.0055;AVGPOST=0.9955;RSQ=0.6562;ERATE=0.0010;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87945568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0119;AVGPOST=0.9919;RSQ=0.7262;ERATE=0.0006;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87945595 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.935;LDAF=0.4423;AVGPOST=0.9362;RSQ=0.8976;ERATE=0.0138;THETA=0.0015;AC=977;AN=2184 GT:DS:GL:BD 0.44734433 0
1 87945610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5227;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87945640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.973;LDAF=0.2631;AVGPOST=0.9938;RSQ=0.9866;ERATE=0.0010;THETA=0.0012;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 87945688 . T TTAAA 164 PASS INDEL;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3176;ERATE=0.0008;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87945692 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.827;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7201;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87945706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7225;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87945738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2624;AVGPOST=0.9978;RSQ=0.9950;ERATE=0.0006;THETA=0.0006;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 87945824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0156;AVGPOST=0.9986;RSQ=0.9607;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 87945843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.7802;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87945939 rs34066579 AT A 115 PASS INDEL;BAVGPOST=0.988;BRSQ=0.492;LDAF=0.0172;AVGPOST=0.9802;RSQ=0.5359;ERATE=0.0032;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87945955 rs58338191 A ACC 244 PASS INDEL;BAVGPOST=0.981;BRSQ=0.535;LDAF=0.0353;AVGPOST=0.9557;RSQ=0.4988;ERATE=0.0086;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 87945959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.800;LDAF=0.4193;AVGPOST=0.8734;RSQ=0.7637;ERATE=0.0654;THETA=0.0005;AC=889;AN=2184 GT:DS:GL:BD 0.40705130 0
1 87945960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.707;LDAF=0.0972;AVGPOST=0.9238;RSQ=0.6370;ERATE=0.0330;THETA=0.0027;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 87945964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.468;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4167;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87945985 rs11429771 A AT 28083 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4506;AVGPOST=0.9926;RSQ=0.9877;ERATE=0.0012;THETA=0.0002;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 87946081 . T TC 1065 PASS INDEL;BAVGPOST=0.849;BRSQ=0.686;LDAF=0.2521;AVGPOST=0.8431;RSQ=0.7238;ERATE=0.0081;THETA=0.0005;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 87946083 . T TA 973 PASS INDEL;BAVGPOST=0.848;BRSQ=0.689;LDAF=0.2687;AVGPOST=0.8500;RSQ=0.7458;ERATE=0.0065;THETA=0.0034;AC=555;AN=2184 GT:DS:GL:BD 0.25412089 0
1 87946088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7183;AVGPOST=0.9936;RSQ=0.9874;ERATE=0.0005;THETA=0.0024;AC=1571;AN=2184 GT:DS:GL:BD 0.71932232 1
1 87946138 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2435;AVGPOST=0.9877;RSQ=0.9737;ERATE=0.0009;THETA=0.0004;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 87946259 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0289;AVGPOST=0.9977;RSQ=0.9677;ERATE=0.0005;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 87946292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0100;AVGPOST=0.9980;RSQ=0.9168;ERATE=0.0005;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87946425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7908;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87946447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.4535;AVGPOST=0.9880;RSQ=0.9821;ERATE=0.0021;THETA=0.0007;AC=989;AN=2184 GT:DS:GL:BD 0.45283884 0
1 87946534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8996;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87946590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4506;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0006;THETA=0.0004;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 87946654 rs5775472 AT A 21025 PASS INDEL;BAVGPOST=0.986;BRSQ=0.966;LDAF=0.2562;AVGPOST=0.9948;RSQ=0.9889;ERATE=0.0007;THETA=0.0020;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 87946790 . TC T 24738 PASS INDEL;BAVGPOST=0.992;BRSQ=0.453;LDAF=0.9854;AVGPOST=0.9794;RSQ=0.4402;ERATE=0.0035;THETA=0.0004;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 87946793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0287;AVGPOST=0.9983;RSQ=0.9800;ERATE=0.0003;THETA=0.0002;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 87946800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6340;ERATE=0.0008;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87946855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.411;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5080;ERATE=0.0005;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87946970 . A AT 968 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0170;AVGPOST=0.9951;RSQ=0.9080;ERATE=0.0004;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87947190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0144;AVGPOST=0.9970;RSQ=0.9157;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87947222 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4691;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87947234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6763;ERATE=0.0008;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87947243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1844;AVGPOST=0.9986;RSQ=0.9961;ERATE=0.0005;THETA=0.0004;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 87947317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9763;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87947387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9522;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87947619 . AAAT A 486 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0063;AVGPOST=0.9963;RSQ=0.7688;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87947650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9544;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87947764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9247;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87947823 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.440;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5964;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87947873 . GTC G 118 PASS INDEL;BAVGPOST=0.997;BRSQ=0.587;LDAF=0.0049;AVGPOST=0.9947;RSQ=0.5305;ERATE=0.0009;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87947887 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0048;AVGPOST=0.9961;RSQ=0.7029;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87947901 . TA T 19 PASS INDEL;BAVGPOST=0.997;BRSQ=0.595;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8523;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87947926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7630;AVGPOST=0.9965;RSQ=0.9920;ERATE=0.0006;THETA=0.0003;AC=1668;AN=2184 GT:DS:GL:BD 0.76373625 1
1 87947932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4157;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87947957 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4595;AVGPOST=0.9945;RSQ=0.9906;ERATE=0.0008;THETA=0.0003;AC=1004;AN=2184 GT:DS:GL:BD 0.45970696 0
1 87947980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0137;AVGPOST=0.9980;RSQ=0.9466;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87948062 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0143;AVGPOST=0.9969;RSQ=0.9303;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87948065 . A AT 1301 PASS INDEL;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0131;AVGPOST=0.9976;RSQ=0.9362;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87948067 . GA G 776 PASS INDEL;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0127;AVGPOST=0.9982;RSQ=0.9464;ERATE=0.0005;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87948077 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0138;AVGPOST=0.9987;RSQ=0.9651;ERATE=0.0003;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87948081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0137;AVGPOST=0.9989;RSQ=0.9676;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87948084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0047;AVGPOST=0.9984;RSQ=0.8611;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87948188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.3687;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87948261 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.4393;AVGPOST=0.9976;RSQ=0.9957;ERATE=0.0006;THETA=0.0002;AC=960;AN=2184 GT:DS:GL:BD 0.43956044 0
1 87948416 . GTAAT G 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4734;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87948455 . CAAT C 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4327;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87948679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6765;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87948691 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7715;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87948748 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87948818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0065;AVGPOST=0.9986;RSQ=0.8985;ERATE=0.0005;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87949170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7039;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87949207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4232;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87949333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0068;AVGPOST=0.9984;RSQ=0.8935;ERATE=0.0005;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87949371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87949394 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2759;AVGPOST=0.9978;RSQ=0.9958;ERATE=0.0004;THETA=0.0004;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 87949519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7475;AVGPOST=0.9967;RSQ=0.9931;ERATE=0.0006;THETA=0.0004;AC=1634;AN=2184 GT:DS:GL:BD 0.74816847 1
1 87949690 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0936;AVGPOST=0.9992;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 87949787 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87949794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2762;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 87949857 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8479;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87949933 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87949965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.5517;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87949981 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7372;AVGPOST=0.9982;RSQ=0.9958;ERATE=0.0006;THETA=0.0005;AC=1610;AN=2184 GT:DS:GL:BD 0.73717946 1
1 87950049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.665;LDAF=0.0101;AVGPOST=0.9878;RSQ=0.5478;ERATE=0.0034;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87950085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.9970;AVGPOST=0.9988;RSQ=0.8331;ERATE=0.0002;THETA=0.0004;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 87950086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4609;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87950090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4209;AVGPOST=0.9965;RSQ=0.9946;ERATE=0.0006;THETA=0.0003;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 87950246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7414;AVGPOST=0.9980;RSQ=0.9956;ERATE=0.0006;THETA=0.0010;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 87950258 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6097;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87950306 . GAT G 16369 PASS INDEL;BAVGPOST=0.968;BRSQ=0.945;LDAF=0.4348;AVGPOST=0.9820;RSQ=0.9733;ERATE=0.0005;THETA=0.0005;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 87950436 . ATAT A 23035 PASS INDEL;BAVGPOST=0.962;BRSQ=0.933;LDAF=0.4178;AVGPOST=0.9575;RSQ=0.9384;ERATE=0.0051;THETA=0.0010;AC=916;AN=2184 GT:DS:GL:BD 0.41941392 0
1 87950439 rs35006869 TATG T 61374 PASS INDEL;BAVGPOST=0.947;BRSQ=0.905;LDAF=0.4586;AVGPOST=0.9436;RSQ=0.9173;ERATE=0.0106;THETA=0.0004;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 87950440 rs35726791 TG T 40555 PASS INDEL;BAVGPOST=0.979;BRSQ=0.949;LDAF=0.7801;AVGPOST=0.9831;RSQ=0.9657;ERATE=0.0010;THETA=0.0002;AC=1708;AN=2184 GT:DS:GL:BD 0.78205127 1
1 87950442 . GA G 4653 PASS INDEL;BAVGPOST=0.961;BRSQ=0.931;LDAF=0.3498;AVGPOST=0.9104;RSQ=0.8613;ERATE=0.0155;THETA=0.0002;AC=771;AN=2184 GT:DS:GL:BD 0.35302198 0
1 87950444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9651;ERATE=0.0003;THETA=0.0018;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87950490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7765;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87950506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87950513 . AT A 562 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0068;AVGPOST=0.9987;RSQ=0.9235;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87950619 . A AT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7072;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87950652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1852;AVGPOST=0.9967;RSQ=0.9915;ERATE=0.0006;THETA=0.0010;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 87950691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.620;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87950695 rs71504628 T TA 18286 PASS INDEL;BAVGPOST=0.985;BRSQ=0.971;LDAF=0.4603;AVGPOST=0.9735;RSQ=0.9601;ERATE=0.0022;THETA=0.0004;AC=1000;AN=2184 GT:DS:GL:BD 0.45787546 0
1 87950788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.742;LDAF=0.0069;AVGPOST=0.9968;RSQ=0.8101;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87950801 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7911;AVGPOST=0.9981;RSQ=0.9954;ERATE=0.0003;THETA=0.0009;AC=1727;AN=2184 GT:DS:GL:BD 0.79075092 1
1 87950843 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.874;BRSQ=0.752;LDAF=0.4831;AVGPOST=0.8334;RSQ=0.7119;ERATE=0.0904;THETA=0.0006;AC=1032;AN=2184 GT:DS:GL:BD 0.47252747 0
1 87951094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8786;ERATE=0.0003;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87951134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4387;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87951297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9996;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87951335 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87951397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.6118;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87951408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0002;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87951473 . GA G 229 PASS INDEL;BAVGPOST=0.997;BRSQ=0.472;LDAF=0.0029;AVGPOST=0.9961;RSQ=0.4931;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87951519 rs61081800 AT A 4686 PASS INDEL;BAVGPOST=0.988;BRSQ=0.933;LDAF=0.1005;AVGPOST=0.9929;RSQ=0.9696;ERATE=0.0006;THETA=0.0003;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 87951520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4414;AVGPOST=0.9945;RSQ=0.9911;ERATE=0.0005;THETA=0.0003;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 87951523 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7474;AVGPOST=0.9978;RSQ=0.9951;ERATE=0.0005;THETA=0.0004;AC=1633;AN=2184 GT:DS:GL:BD 0.74771065 1
1 87951563 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7680;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0004;THETA=0.0006;AC=1678;AN=2184 GT:DS:GL:BD 0.76831502 1
1 87951620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7511;AVGPOST=0.9959;RSQ=0.9923;ERATE=0.0006;THETA=0.0009;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 87951664 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9979;RSQ=0.9633;ERATE=0.0003;THETA=0.0027;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 87951697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7507;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0006;THETA=0.0018;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 87951740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.894;LDAF=0.0302;AVGPOST=0.9946;RSQ=0.9337;ERATE=0.0004;THETA=0.0019;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87951801 rs112108702 GTATGT G 109377 PASS INDEL;BAVGPOST=0.985;BRSQ=0.968;LDAF=0.7354;AVGPOST=0.9756;RSQ=0.9526;ERATE=0.0066;THETA=0.0003;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 87951964 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0170;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 87952042 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87952053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87952054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7507;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=1640;AN=2184 GT:DS:GL:BD 0.75091577 1
1 87952073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0315;AVGPOST=0.9980;RSQ=0.9797;ERATE=0.0003;THETA=0.0008;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87952198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5187;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87952299 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4508;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87952303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5985;AVGPOST=0.9967;RSQ=0.9948;ERATE=0.0006;THETA=0.0004;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 87952316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2174;AVGPOST=0.9990;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 87952394 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4757;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87952404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87952512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0162;AVGPOST=0.9973;RSQ=0.9277;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87952610 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87952639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87952643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7797;ERATE=0.0010;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87952700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8652;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87952824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0026;AVGPOST=0.9966;RSQ=0.5010;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87952996 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87953010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9663;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87953066 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.973;LDAF=0.5058;AVGPOST=0.9764;RSQ=0.9662;ERATE=0.0048;THETA=0.0003;AC=1115;AN=2184 GT:DS:GL:BD 0.51053113 1
1 87953209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3852;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87953210 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2176;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 87953240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87953562 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87953618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3414;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 87953638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0372;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 87953651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8816;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87953677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87953700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6706;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87953751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87953920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8472;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87953945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9948;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87954013 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6994;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87954036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6166;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87954178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8483;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87954211 . AAT A 239 PASS INDEL;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.8272;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87954274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1403;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 87954402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4975;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87954573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.902;LDAF=0.0191;AVGPOST=0.9951;RSQ=0.9056;ERATE=0.0005;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 87954909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87955003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3163;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 87955042 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8216;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87955059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8443;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87955074 . GC G 160 PASS INDEL;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.5511;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87955083 . CTG C 429 PASS INDEL;BAVGPOST=0.981;BRSQ=0.700;LDAF=0.0532;AVGPOST=0.9452;RSQ=0.5433;ERATE=0.0230;THETA=0.0009;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 87955111 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87955184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9100;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87955311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87955341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87955361 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87955617 . A AAAT 12654 PASS INDEL;BAVGPOST=0.936;BRSQ=0.842;LDAF=0.2446;AVGPOST=0.9413;RSQ=0.8811;ERATE=0.0015;THETA=0.0003;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 87955627 . A AAAT 15069 PASS INDEL;BAVGPOST=0.935;BRSQ=0.840;LDAF=0.2556;AVGPOST=0.9075;RSQ=0.8083;ERATE=0.0145;THETA=0.0005;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 87955629 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6288;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87955850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.5597;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87955902 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 87955974 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6269;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87955997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9993;RSQ=0.9719;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87956114 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6016;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0006;THETA=0.0011;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 87956148 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.933;LDAF=0.0330;AVGPOST=0.9941;RSQ=0.9310;ERATE=0.0005;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 87956245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87956509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7561;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87956619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9436;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87956644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9232;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87956656 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.9170;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87956669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9318;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87956680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87956709 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0043;AVGPOST=0.9977;RSQ=0.8108;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87956721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.3681;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87956781 . TTGTA T 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3436;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87956949 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87956979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9623;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87956981 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2856;AVGPOST=0.9980;RSQ=0.9958;ERATE=0.0005;THETA=0.0005;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 87957025 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6827;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87957263 . CCAA C 225 PASS INDEL;BAVGPOST=0.994;BRSQ=0.670;LDAF=0.0142;AVGPOST=0.9856;RSQ=0.5941;ERATE=0.0027;THETA=0.0037;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87957303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87957309 . T TA 3211 PASS INDEL;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0247;AVGPOST=0.9981;RSQ=0.9625;ERATE=0.0004;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 87957329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8405;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87957340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2353;AVGPOST=0.9967;RSQ=0.9934;ERATE=0.0004;THETA=0.0014;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 87957365 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87957378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7740;ERATE=0.0003;THETA=0.0045;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87957468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9421;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 87957633 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9934;AVGPOST=0.9993;RSQ=0.9525;ERATE=0.0004;THETA=0.0007;AC=2170;AN=2184 GT:DS:GL:BD 0.99358976 1
1 87957687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87957726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9813;ERATE=0.0003;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 87957771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7478;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87958037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8716;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87958088 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87958099 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7073;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87958120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5286;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87958149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8821;ERATE=0.0005;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87958350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4450;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87958467 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5181;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87958531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87958576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87958634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87958704 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2369;AVGPOST=0.9975;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=517;AN=2184 GT:DS:GL:BD 0.23672161 0
1 87958710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5471;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87958723 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4785;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87958785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6350;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87958810 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0081;AVGPOST=0.9989;RSQ=0.9440;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87958887 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87958946 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5009;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87959049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0280;AVGPOST=0.9989;RSQ=0.9853;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 87959086 . A AT 17 PASS INDEL;BAVGPOST=0.998;BRSQ=0.496;LDAF=0.0036;AVGPOST=0.9970;RSQ=0.6463;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87959136 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.755;LDAF=0.0401;AVGPOST=0.9722;RSQ=0.7118;ERATE=0.0054;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87959137 . AT A 125 PASS INDEL;BAVGPOST=0.997;BRSQ=0.716;LDAF=0.0055;AVGPOST=0.9947;RSQ=0.6213;ERATE=0.0011;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87959138 . T TAC 1947 PASS INDEL;BAVGPOST=0.897;BRSQ=0.713;LDAF=0.1873;AVGPOST=0.9418;RSQ=0.8627;ERATE=0.0010;THETA=0.0008;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 87959141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.9837;AVGPOST=0.9950;RSQ=0.8915;ERATE=0.0004;THETA=0.0004;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 87959160 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0063;AVGPOST=0.9938;RSQ=0.6522;ERATE=0.0004;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87959185 . TTA T 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.498;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.3533;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87959236 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8596;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87959305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9991;RSQ=0.9542;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87959497 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87959529 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.789;LDAF=0.0376;AVGPOST=0.9866;RSQ=0.8776;ERATE=0.0004;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 87959681 rs11363052 AT A 9591 PASS INDEL;BAVGPOST=0.988;BRSQ=0.974;LDAF=0.2436;AVGPOST=0.9878;RSQ=0.9757;ERATE=0.0009;THETA=0.0009;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 87959819 . TACAA T 342 PASS INDEL;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0029;AVGPOST=0.9981;RSQ=0.7278;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87960090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5255;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87960100 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.607;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8385;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87960260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8867;ERATE=0.0006;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87960282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6258;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87960301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6997;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87960320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.657;LDAF=0.0047;AVGPOST=0.9976;RSQ=0.8269;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87960349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8621;ERATE=0.0004;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87960435 . AAAC A 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87960449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87960565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9670;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87960575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7511;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87960637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87960670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5981;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87960686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7377;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87960696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9736;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87960732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0056;AVGPOST=0.9941;RSQ=0.5859;ERATE=0.0012;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87960769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87960848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0271;AVGPOST=0.9979;RSQ=0.9717;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87960952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7751;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87961145 . G GT 159 PASS INDEL;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7210;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87961150 . AC A 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87961281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87961379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87961483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9597;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87961501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6862;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0006;THETA=0.0005;AC=1499;AN=2184 GT:DS:GL:BD 0.68635529 1
1 87961512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87961603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2356;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0004;THETA=0.0007;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 87961672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87961700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6337;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87961744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87961776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9769;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87961831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9016;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87961969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87962130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87962164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8505;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87962170 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6268;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87962181 . TA T 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87962196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87962231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8726;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87962411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9848;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87962488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0031;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87962505 . C CAACT 243 PASS INDEL;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9228;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87962525 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0025;AVGPOST=0.9966;RSQ=0.4998;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87962536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4879;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87962619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0141;AVGPOST=0.9904;RSQ=0.7110;ERATE=0.0012;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87962747 . TTTAA T 4693 PASS INDEL;BAVGPOST=0.991;BRSQ=0.967;LDAF=0.1373;AVGPOST=0.9667;RSQ=0.8970;ERATE=0.0021;THETA=0.0005;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 87962757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.767;LDAF=0.0091;AVGPOST=0.9947;RSQ=0.7716;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87962821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1693;AVGPOST=0.9933;RSQ=0.9807;ERATE=0.0009;THETA=0.0011;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 87963138 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.537;LDAF=0.0059;AVGPOST=0.9925;RSQ=0.5160;ERATE=0.0006;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87963142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8707;ERATE=0.0005;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87963270 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.522;LDAF=0.0114;AVGPOST=0.9851;RSQ=0.5107;ERATE=0.0012;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87963284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0054;AVGPOST=0.9967;RSQ=0.7608;ERATE=0.0005;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87963359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7683;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87963549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0078;AVGPOST=0.9981;RSQ=0.9029;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87963576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.681;LDAF=0.0115;AVGPOST=0.9949;RSQ=0.8136;ERATE=0.0006;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87963756 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0046;AVGPOST=0.9965;RSQ=0.7351;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87963793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8819;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87963805 . C CA 725 PASS INDEL;BAVGPOST=0.991;BRSQ=0.761;LDAF=0.0238;AVGPOST=0.9853;RSQ=0.7611;ERATE=0.0013;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 87963836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9946;AVGPOST=0.9918;RSQ=0.3945;ERATE=0.0007;THETA=0.0004;AC=2179;AN=2184 GT:DS:GL:BD 0.99771065 1
1 87963866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9980;RSQ=0.9057;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87963878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8701;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87963917 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9000;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87963985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0163;AVGPOST=0.9975;RSQ=0.9377;ERATE=0.0003;THETA=0.0017;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87964165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8685;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87964180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.4573;ERATE=0.0008;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87964420 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.812;BRSQ=0.690;LDAF=0.6061;AVGPOST=0.8630;RSQ=0.8082;ERATE=0.0091;THETA=0.0006;AC=1378;AN=2184 GT:DS:GL:BD 0.63095236 1
1 87964474 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0041;AVGPOST=0.9937;RSQ=0.3651;ERATE=0.0007;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87964484 . TATA T 5660 PASS INDEL;BAVGPOST=0.733;BRSQ=0.504;LDAF=0.3753;AVGPOST=0.7231;RSQ=0.5232;ERATE=0.0267;THETA=0.0016;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 87964738 . TA T 5507 PASS INDEL;BAVGPOST=0.702;BRSQ=0.524;LDAF=0.4303;AVGPOST=0.7349;RSQ=0.5718;ERATE=0.0226;THETA=0.0009;AC=867;AN=2184 GT:DS:GL:BD 0.39697802 0
1 87964740 . T TA 813 PASS INDEL;BAVGPOST=0.821;BRSQ=0.324;LDAF=0.1477;AVGPOST=0.8629;RSQ=0.5838;ERATE=0.0009;THETA=0.0004;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 87964743 . T TA 856 PASS INDEL;BAVGPOST=0.822;BRSQ=0.325;LDAF=0.1537;AVGPOST=0.8571;RSQ=0.5782;ERATE=0.0014;THETA=0.0005;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 87964744 . T TA 14 PASS INDEL;BAVGPOST=0.951;BRSQ=0.224;LDAF=0.0835;AVGPOST=0.8765;RSQ=0.3860;ERATE=0.0083;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 87964745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.909;LDAF=0.0167;AVGPOST=0.9967;RSQ=0.9276;ERATE=0.0006;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87964790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.810;LDAF=0.0211;AVGPOST=0.9889;RSQ=0.7784;ERATE=0.0011;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87964843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0060;AVGPOST=0.9962;RSQ=0.7251;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87964884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0027;AVGPOST=0.9954;RSQ=0.3405;ERATE=0.0005;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87964897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0083;AVGPOST=0.9944;RSQ=0.7318;ERATE=0.0005;THETA=0.0018;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87964936 . AG A 1803 PASS INDEL;BAVGPOST=0.972;BRSQ=0.529;LDAF=0.0349;AVGPOST=0.9772;RSQ=0.7478;ERATE=0.0009;THETA=0.0036;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 87964949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.929;LDAF=0.1839;AVGPOST=0.9873;RSQ=0.9693;ERATE=0.0006;THETA=0.0022;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 87965503 rs71088660 T TCTA 1206 PASS INDEL;BAVGPOST=0.534;BRSQ=0.054;LDAF=0.3551;AVGPOST=0.6134;RSQ=0.2867;ERATE=0.0404;THETA=0.0003;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 87965596 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.362;LDAF=0.0074;AVGPOST=0.9922;RSQ=0.5869;ERATE=0.0007;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87965616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0854;AVGPOST=0.9952;RSQ=0.9763;ERATE=0.0004;THETA=0.0010;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 87965819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.809;LDAF=0.0169;AVGPOST=0.9985;RSQ=0.9604;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87965842 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.671;LDAF=0.0110;AVGPOST=0.9906;RSQ=0.6940;ERATE=0.0004;THETA=0.0015;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87966023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.4991;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87966056 . GGA G 8 PASS INDEL;BAVGPOST=0.987;BRSQ=0.114;LDAF=0.1038;AVGPOST=0.8582;RSQ=0.4087;ERATE=0.0037;THETA=0.0012;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 87966326 . CAG C 4204 PASS INDEL;BAVGPOST=0.978;BRSQ=0.781;LDAF=0.0726;AVGPOST=0.9468;RSQ=0.6732;ERATE=0.0239;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 87966339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.627;LDAF=0.0194;AVGPOST=0.9794;RSQ=0.6008;ERATE=0.0041;THETA=0.0034;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87966411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0065;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87966566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.538;LDAF=0.1375;AVGPOST=0.8516;RSQ=0.4754;ERATE=0.0301;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 87966850 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.901;BRSQ=0.832;LDAF=0.6361;AVGPOST=0.9042;RSQ=0.8684;ERATE=0.0085;THETA=0.0012;AC=1418;AN=2184 GT:DS:GL:BD 0.64926738 1
1 87967002 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87967225 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.913;LDAF=0.0234;AVGPOST=0.9969;RSQ=0.9517;ERATE=0.0004;THETA=0.0013;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 87967404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0066;AVGPOST=0.9990;RSQ=0.9465;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87967444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87967469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87967535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4728;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87967735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87967772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6944;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87967778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87967871 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8722;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87967885 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87967912 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7551;ERATE=0.0006;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87967979 . C CT 600 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8728;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87968003 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87968050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87968120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6302;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87968125 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0081;AVGPOST=0.9991;RSQ=0.9578;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87968132 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0480;AVGPOST=0.9989;RSQ=0.9908;ERATE=0.0003;THETA=0.0007;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 87968192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0155;AVGPOST=0.9971;RSQ=0.9165;ERATE=0.0004;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87968221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9169;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87968356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8488;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87968377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8796;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87968398 . GCTTT G 2781 PASS INDEL;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0233;AVGPOST=0.9989;RSQ=0.9784;ERATE=0.0004;THETA=0.0010;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87968640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6230;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87968780 . T TA 31 PASS INDEL;BAVGPOST=0.996;BRSQ=0.359;LDAF=0.0075;AVGPOST=0.9883;RSQ=0.3762;ERATE=0.0010;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87968784 . TC T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3891;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87968903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7905;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87968929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6535;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87968975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4723;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87968993 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9066;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87969007 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9394;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87969018 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0481;AVGPOST=0.9989;RSQ=0.9906;ERATE=0.0003;THETA=0.0008;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 87969058 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87969111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87969206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7803;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87969219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0231;AVGPOST=0.9995;RSQ=0.9902;ERATE=0.0003;THETA=0.0017;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87969264 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87969327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5413;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87969368 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0299;AVGPOST=0.9993;RSQ=0.9890;ERATE=0.0003;THETA=0.0010;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 87969432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87969434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4900;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87969453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.536;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5980;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87969549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0231;AVGPOST=0.9993;RSQ=0.9866;ERATE=0.0003;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87969575 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9370;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87969579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6181;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87969609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9595;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87969703 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6510;ERATE=0.0008;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87969850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0231;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87969898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9127;AVGPOST=0.9978;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=1993;AN=2184 GT:DS:GL:BD 0.91254580 1
1 87970332 . TC T 569 PASS INDEL;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0069;AVGPOST=0.9972;RSQ=0.8252;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87970418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7882;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87970437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0102;AVGPOST=0.9987;RSQ=0.9510;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87970540 . AT A 408 PASS INDEL;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0054;AVGPOST=0.9961;RSQ=0.6970;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87970727 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87970769 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5993;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87970783 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0239;AVGPOST=0.9986;RSQ=0.9772;ERATE=0.0004;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 87970794 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8215;AVGPOST=0.9969;RSQ=0.9919;ERATE=0.0005;THETA=0.0008;AC=1792;AN=2184 GT:DS:GL:BD 0.82051283 1
1 87970848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0161;AVGPOST=0.9992;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 87970856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0231;AVGPOST=0.9995;RSQ=0.9902;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87970922 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7462;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87970988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.869;LDAF=0.7472;AVGPOST=0.9234;RSQ=0.8465;ERATE=0.0121;THETA=0.0008;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 87971091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.866;LDAF=0.6970;AVGPOST=0.8954;RSQ=0.8230;ERATE=0.0403;THETA=0.0009;AC=1566;AN=2184 GT:DS:GL:BD 0.71703297 1
1 87971123 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7197;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87971179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.537;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8439;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87971232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.927;BRSQ=0.827;LDAF=0.2869;AVGPOST=0.9095;RSQ=0.8225;ERATE=0.0165;THETA=0.0012;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 87971336 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0233;AVGPOST=0.9990;RSQ=0.9801;ERATE=0.0004;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 87971347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87971383 . T TG 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7349;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87971533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0055;AVGPOST=0.9993;RSQ=0.9578;ERATE=0.0003;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87971614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0317;AVGPOST=0.9990;RSQ=0.9892;ERATE=0.0003;THETA=0.0008;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 87971684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9724;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87971813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6156;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87971850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9977;RSQ=0.8168;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87971982 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87971998 . TG T 372 PASS INDEL;BAVGPOST=0.816;BRSQ=0.247;LDAF=0.1942;AVGPOST=0.7502;RSQ=0.3509;ERATE=0.0281;THETA=0.0006;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 87972146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7962;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87972216 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0106;AVGPOST=0.9990;RSQ=0.9556;ERATE=0.0004;THETA=0.0001;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87972340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0306;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87972380 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.8181;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87972521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5849;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87972587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87972696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0157;AVGPOST=0.9992;RSQ=0.9780;ERATE=0.0003;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 87972733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6510;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87972820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9041;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87972841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0312;AVGPOST=0.9987;RSQ=0.9821;ERATE=0.0003;THETA=0.0011;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 87972849 rs36109764 C CT 893 PASS INDEL;BAVGPOST=0.603;BRSQ=0.206;LDAF=0.4078;AVGPOST=0.6529;RSQ=0.3455;ERATE=0.0427;THETA=0.0006;AC=744;AN=2184 GT:DS:GL:BD 0.34065935 0
1 87972876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0083;AVGPOST=0.9924;RSQ=0.6591;ERATE=0.0007;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87972913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0045;AVGPOST=0.9969;RSQ=0.7307;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87972924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8556;ERATE=0.0005;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87972930 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3294;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87973080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9200;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87973216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87973279 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4959;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87973337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1541;AVGPOST=0.9971;RSQ=0.9908;ERATE=0.0004;THETA=0.0004;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 87973344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87973425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0505;AVGPOST=0.9994;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 87973500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87973529 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9598;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87973554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1214;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 87973577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0172;AVGPOST=0.9984;RSQ=0.9622;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 87973682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87973705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0360;AVGPOST=0.9994;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87973708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8754;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87973712 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7969;ERATE=0.0003;THETA=0.0082;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87973802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0300;AVGPOST=0.9969;RSQ=0.9641;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 87973944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87974008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.9182;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87974196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1529;AVGPOST=0.9941;RSQ=0.9827;ERATE=0.0013;THETA=0.0004;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 87974211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87974262 . G GA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87974383 . A AG 22345 PASS INDEL;BAVGPOST=0.912;BRSQ=0.801;LDAF=0.6674;AVGPOST=0.8753;RSQ=0.7838;ERATE=0.0944;THETA=0.0004;AC=1515;AN=2184 GT:DS:GL:BD 0.69368130 1
1 87974429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8348;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87974475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.961;LDAF=0.1606;AVGPOST=0.9848;RSQ=0.9599;ERATE=0.0085;THETA=0.0002;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 87974530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2834;AVGPOST=0.9908;RSQ=0.9837;ERATE=0.0046;THETA=0.0001;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 87974574 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.2056;AVGPOST=0.9902;RSQ=0.9780;ERATE=0.0029;THETA=0.0002;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 87974604 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9339;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87974609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87974641 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0031;AVGPOST=0.9971;RSQ=0.6171;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87974764 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6096;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87974823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0522;AVGPOST=0.9954;RSQ=0.9657;ERATE=0.0015;THETA=0.0002;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 87974893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9275;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87974957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87975007 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0616;AVGPOST=0.9989;RSQ=0.9920;ERATE=0.0003;THETA=0.0002;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 87975307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0331;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0014;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 87975318 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8945;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87975331 . ATCAG A 191 PASS INDEL;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8503;ERATE=0.0006;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87975487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7070;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87975488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0081;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87975526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9090;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87975592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0365;AVGPOST=0.9989;RSQ=0.9872;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 87975659 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87975768 rs58223471 T TG 4562 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0365;AVGPOST=0.9991;RSQ=0.9892;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 87975812 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4590;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87975839 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2960;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 87975931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9998;RSQ=0.9908;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 87975949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4706;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87976199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5667;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87976241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0068;AVGPOST=0.9986;RSQ=0.9137;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87976363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.690;LDAF=0.0057;AVGPOST=0.9959;RSQ=0.7173;ERATE=0.0007;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87976367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7903;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87976369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1237;AVGPOST=0.9991;RSQ=0.9962;ERATE=0.0005;THETA=0.0001;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 87976375 . G GT 147 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0067;AVGPOST=0.9943;RSQ=0.6695;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87976398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6806;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0004;THETA=0.0002;AC=1488;AN=2184 GT:DS:GL:BD 0.68131870 1
1 87976551 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87976608 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0106;AVGPOST=0.9981;RSQ=0.9222;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87976643 rs34810153 CTA C 38382 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3319;AVGPOST=0.9841;RSQ=0.9738;ERATE=0.0033;THETA=0.0003;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 87976802 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87976862 . C CT 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5371;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87976888 . TAA T 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87976965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0362;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 87977061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7104;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87977081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87977108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87977112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87977114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87977190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0363;AVGPOST=0.9993;RSQ=0.9912;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 87977274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8656;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87977283 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87977298 . CTG C 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7725;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87977377 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4327;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87977648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.8011;AVGPOST=0.9978;RSQ=0.9944;ERATE=0.0005;THETA=0.0004;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 87977741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9820;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87977751 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0119;AVGPOST=0.9994;RSQ=0.9792;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87977782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2201;AVGPOST=0.9954;RSQ=0.9903;ERATE=0.0006;THETA=0.0008;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 87977870 rs113228505 GT G 7499 PASS INDEL;BAVGPOST=0.982;BRSQ=0.953;LDAF=0.2185;AVGPOST=0.9928;RSQ=0.9845;ERATE=0.0006;THETA=0.0014;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 87977889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9452;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87977991 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0063;AVGPOST=0.9987;RSQ=0.9073;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87977993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6929;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87978095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87978197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2194;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0005;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 87978212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8565;ERATE=0.0003;THETA=0.0016;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87978391 . C CT 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0040;AVGPOST=0.9949;RSQ=0.5343;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87978500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9075;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87978509 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87978531 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8373;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87978589 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.863;LDAF=0.0623;AVGPOST=0.9910;RSQ=0.9450;ERATE=0.0004;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 87978705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.922;LDAF=0.0767;AVGPOST=0.9904;RSQ=0.9527;ERATE=0.0004;THETA=0.0007;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 87978722 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.930;LDAF=0.0763;AVGPOST=0.9921;RSQ=0.9617;ERATE=0.0003;THETA=0.0015;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 87978734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.930;LDAF=0.0768;AVGPOST=0.9921;RSQ=0.9614;ERATE=0.0003;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 87978736 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0225;AVGPOST=0.9987;RSQ=0.9779;ERATE=0.0003;THETA=0.0024;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 87978754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.957;LDAF=0.0508;AVGPOST=0.9971;RSQ=0.9760;ERATE=0.0003;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 87978862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.966;LDAF=0.0921;AVGPOST=0.9949;RSQ=0.9761;ERATE=0.0008;THETA=0.0003;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 87978875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0803;AVGPOST=0.9966;RSQ=0.9813;ERATE=0.0003;THETA=0.0008;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 87978892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5879;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87978893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2544;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 87979083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87979099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87979233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87979239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0956;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87979243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0953;AVGPOST=0.9981;RSQ=0.9912;ERATE=0.0006;THETA=0.0004;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87979296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.0963;AVGPOST=0.9989;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 87979319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0955;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87979352 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4742;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87979430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87979463 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9660;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87979476 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2073;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 87979485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0604;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 87979617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0107;AVGPOST=0.9990;RSQ=0.9676;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87979745 rs71730900 GTGA G 9497 PASS INDEL;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0981;AVGPOST=0.9979;RSQ=0.9899;ERATE=0.0005;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 87979767 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87979802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0120;AVGPOST=0.9996;RSQ=0.9872;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87979823 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9993;RSQ=0.9780;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87979844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9216;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87979915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87980087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87980245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0603;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 87980255 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8861;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87980266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6966;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87980304 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9339;ERATE=0.0003;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87980335 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6634;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87980418 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2548;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 87980467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87980516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5292;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=1155;AN=2184 GT:DS:GL:BD 0.52884614 1
1 87980601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0955;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87980628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87980863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0932;AVGPOST=0.9991;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 87980864 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87980873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87980917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87980925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87981007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87981065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87981114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0955;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87981126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87981141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0603;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 87981206 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87981230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87981244 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2075;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0002;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 87981269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0956;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87981290 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1567;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 87981305 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3736;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0005;THETA=0.0005;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 87981329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0955;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0002;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87981330 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87981382 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6849;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87981386 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87981439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0075;AVGPOST=0.9994;RSQ=0.9644;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 87981463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0956;AVGPOST=0.9998;RSQ=0.9988;ERATE=0.0003;THETA=0.0002;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87981466 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0954;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87981509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0055;AVGPOST=0.9988;RSQ=0.9142;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87981510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87981523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87981526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 87981559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5883;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87981599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7816;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87981731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8665;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87981742 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87981825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87981837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0649;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0002;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 87981839 . TC T 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87981875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0603;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 87981971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87981989 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0649;AVGPOST=1.0000;RSQ=0.9996;ERATE=0.0003;THETA=0.0007;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 87982035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87982051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87982069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87982164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87982183 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87982191 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87982264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0605;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 87982331 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87982340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 87982376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6463;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87982523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6009;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87982683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8227;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87982722 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87982809 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0112;AVGPOST=0.9977;RSQ=0.9186;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 87982953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87983004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8447;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87983121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0347;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 87983139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8903;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87983168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4495;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87983341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8406;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87983424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7478;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87983432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5800;AVGPOST=0.9947;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 87983593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87983621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3620;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87983739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8351;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87983786 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87983818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87983826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0751;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0005;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 87983901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87983912 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0530;AVGPOST=0.9985;RSQ=0.9892;ERATE=0.0004;THETA=0.0002;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 87984016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87984057 . A AT 263 PASS INDEL;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8603;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87984290 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87984348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87984426 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8914;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87984434 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4402;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87984451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87984608 . CT C 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.6352;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87984737 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0523;AVGPOST=0.9989;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 87984743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9666;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87984883 . TAC T 146 PASS INDEL;BAVGPOST=0.992;BRSQ=0.734;LDAF=0.0205;AVGPOST=0.9819;RSQ=0.6382;ERATE=0.0088;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 87984901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87984982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0273;AVGPOST=0.9991;RSQ=0.9854;ERATE=0.0003;THETA=0.0011;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 87985047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6001;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87985119 . AC A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87985182 . AT A 347 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87985194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0051;AVGPOST=0.9975;RSQ=0.8114;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87985240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4975;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87985316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87985330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87985332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87985439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87985457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0489;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 87985472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8574;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87985560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9558;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87985571 . C CTACA 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87985584 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87985752 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0358;AVGPOST=0.9991;RSQ=0.9897;ERATE=0.0003;THETA=0.0018;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87985864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5124;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87985911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8113;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87985991 rs72037956 TTTTG T 3224 PASS INDEL;BAVGPOST=0.995;BRSQ=0.922;LDAF=0.0345;AVGPOST=0.9968;RSQ=0.9646;ERATE=0.0006;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 87986021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4918;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87986120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87986139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4425;AVGPOST=0.9845;RSQ=0.9761;ERATE=0.0007;THETA=0.0007;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 87986187 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.8045;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87986307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.4806;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87986319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5009;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87986343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6576;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87986503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9560;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87986522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7704;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87986605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87986618 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87986659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7552;ERATE=0.0004;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87986686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8151;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87986706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0034;AVGPOST=0.9984;RSQ=0.8319;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87986738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87986773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.445;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5650;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87986802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0051;AVGPOST=0.9957;RSQ=0.6972;ERATE=0.0014;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87986805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87986903 . GT G 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87986937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0013;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 87987289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1121;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 87987424 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8649;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87987489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0340;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 87987519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9990;RSQ=0.9369;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87987694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8618;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 87987701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87987712 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87987740 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5302;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87987831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0357;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87988019 . GC G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4431;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87988064 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7183;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87988076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0361;AVGPOST=0.9991;RSQ=0.9890;ERATE=0.0004;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 87988241 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0039;AVGPOST=0.9988;RSQ=0.8632;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87988260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87988631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6347;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87988727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87988748 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8036;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87988808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4891;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87989023 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7588;ERATE=0.0005;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87989042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.6830;ERATE=0.0008;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87989044 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9415;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 87989209 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87989257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2622;AVGPOST=0.9986;RSQ=0.9969;ERATE=0.0004;THETA=0.0006;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 87989285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87989295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87989307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6559;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87989332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 87989342 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8981;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87989350 . A AT 318 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87989729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7285;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87989746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1141;AVGPOST=0.9991;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 87989808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9162;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 87989843 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9996;RSQ=0.8634;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87990150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0102;AVGPOST=0.9991;RSQ=0.9648;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 87990182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87990281 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87990369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0094;AVGPOST=0.9993;RSQ=0.9640;ERATE=0.0010;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 87990425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 87990445 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7214;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87990561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87990575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0175;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 87990692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87990750 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.8237;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87990753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87990849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1143;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0003;THETA=0.0008;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 87990881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6595;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87991234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6949;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87991272 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7909;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87991344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9640;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87991363 . GA G 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7002;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87991368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8118;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87991388 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5839;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87991426 . A AG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87991438 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 87991442 . G GA 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4522;ERATE=0.0007;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87991456 . TA T 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6446;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87991462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87991472 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87991615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9987;RSQ=0.9309;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87991641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6516;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87991701 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9147;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87991782 . A AT 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4264;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87991831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7629;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87991854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87992149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0215;AVGPOST=0.9995;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87992163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87992275 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87992319 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.6023;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87992362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7895;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87992414 . T TTA 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.6199;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87992558 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6077;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87992614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87992617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5052;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87992676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87992677 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8325;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87992695 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8529;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87992701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7706;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87992873 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87992884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6393;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87993319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6347;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87993557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87993663 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 87993748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.773;LDAF=0.0063;AVGPOST=0.9977;RSQ=0.8568;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87993841 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2003;AVGPOST=0.9942;RSQ=0.9853;ERATE=0.0010;THETA=0.0008;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 87993847 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0230;AVGPOST=0.9959;RSQ=0.9338;ERATE=0.0009;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87993911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.462;LDAF=0.0099;AVGPOST=0.9871;RSQ=0.4926;ERATE=0.0011;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87993981 . CA C 78 PASS INDEL;BAVGPOST=0.997;BRSQ=0.477;LDAF=0.0072;AVGPOST=0.9889;RSQ=0.4205;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87993982 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1862;AVGPOST=0.9966;RSQ=0.9907;ERATE=0.0004;THETA=0.0004;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 87994133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1867;AVGPOST=0.9964;RSQ=0.9902;ERATE=0.0007;THETA=0.0012;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 87994228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6860;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87994398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7461;ERATE=0.0004;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87994451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9898;ERATE=0.0004;THETA=0.0013;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87994514 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87994542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87994603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8772;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87994841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0014;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87994954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5051;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87994976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4921;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87995007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0491;AVGPOST=0.9957;RSQ=0.9727;ERATE=0.0005;THETA=0.0028;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 87995085 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87995265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0217;AVGPOST=0.9982;RSQ=0.9743;ERATE=0.0003;THETA=0.0046;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 87995268 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8129;ERATE=0.0009;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87995356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0194;AVGPOST=0.9994;RSQ=0.9880;ERATE=0.0003;THETA=0.0037;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 87995649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.442;LDAF=0.0065;AVGPOST=0.9887;RSQ=0.3350;ERATE=0.0017;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87995733 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.574;LDAF=0.0065;AVGPOST=0.9927;RSQ=0.5329;ERATE=0.0006;THETA=0.0020;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87995756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.393;LDAF=0.0037;AVGPOST=0.9960;RSQ=0.5605;ERATE=0.0007;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 87995797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.437;LDAF=0.0708;AVGPOST=0.9163;RSQ=0.5163;ERATE=0.0103;THETA=0.0013;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 87995847 . T TCG 39 PASS INDEL;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0035;AVGPOST=0.9960;RSQ=0.4994;ERATE=0.0010;THETA=0.0095;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87995943 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0149;AVGPOST=0.9958;RSQ=0.8987;ERATE=0.0005;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 87995980 . AG A 127 PASS INDEL;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6001;ERATE=0.0012;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87996116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5638;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87996374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87996413 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5737;AVGPOST=0.9964;RSQ=0.9948;ERATE=0.0003;THETA=0.0022;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 87996473 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5750;AVGPOST=0.9951;RSQ=0.9927;ERATE=0.0004;THETA=0.0005;AC=1257;AN=2184 GT:DS:GL:BD 0.57554942 1
1 87996505 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9995;RSQ=0.9830;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 87996641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6667;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87996693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4926;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87996700 . TA T 6274 PASS INDEL;BAVGPOST=0.945;BRSQ=0.831;LDAF=0.1752;AVGPOST=0.9400;RSQ=0.8446;ERATE=0.0034;THETA=0.0012;AC=373;AN=2184 GT:DS:GL:BD 0.17078754 0
1 87996852 . A ATTTT 5197 PASS INDEL;BAVGPOST=0.912;BRSQ=0.637;LDAF=0.1544;AVGPOST=0.9047;RSQ=0.7268;ERATE=0.0105;THETA=0.0010;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 87996855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0078;AVGPOST=0.9935;RSQ=0.6806;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87996936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0085;AVGPOST=0.9943;RSQ=0.7561;ERATE=0.0005;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 87996948 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.690;LDAF=0.0070;AVGPOST=0.9958;RSQ=0.7721;ERATE=0.0005;THETA=0.0034;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 87997091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0058;AVGPOST=0.9985;RSQ=0.8822;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87997098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0605;AVGPOST=0.9995;RSQ=0.9963;ERATE=0.0003;THETA=0.0009;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 87997145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.1611;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 87997244 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87997250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1098;AVGPOST=0.9981;RSQ=0.9928;ERATE=0.0003;THETA=0.0001;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 87997308 . GA G 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.551;LDAF=0.0052;AVGPOST=0.9939;RSQ=0.5118;ERATE=0.0013;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87997331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0066;AVGPOST=0.9959;RSQ=0.7693;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 87997339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1240;AVGPOST=0.9983;RSQ=0.9942;ERATE=0.0005;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 87997388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.6657;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87997452 rs58938148 CAG C 15801 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0946;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 87997459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87997510 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5424;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87997514 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87997569 . C CA 268 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87997604 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8112;ERATE=0.0010;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 87997722 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3707;AVGPOST=0.9924;RSQ=0.9887;ERATE=0.0026;THETA=0.0002;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 87997724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5786;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87997764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.9181;AVGPOST=0.9981;RSQ=0.9893;ERATE=0.0007;THETA=0.0003;AC=2007;AN=2184 GT:DS:GL:BD 0.91895604 1
1 87997809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87998133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0063;AVGPOST=0.9980;RSQ=0.8886;ERATE=0.0002;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87998185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8483;ERATE=0.0002;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 87998193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6012;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87998313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2259;AVGPOST=0.9982;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 87998325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6164;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87998341 . A AT 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87998424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1257;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0002;THETA=0.0004;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 87998484 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1259;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 87998545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5491;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87998663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1262;AVGPOST=0.9984;RSQ=0.9946;ERATE=0.0004;THETA=0.0001;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 87998880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87998906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0268;AVGPOST=0.9993;RSQ=0.9889;ERATE=0.0004;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87999024 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87999076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0206;AVGPOST=0.9978;RSQ=0.9608;ERATE=0.0004;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 87999100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7929;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87999456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1154;AVGPOST=0.9989;RSQ=0.9954;ERATE=0.0002;THETA=0.0003;AC=253;AN=2184 GT:DS:GL:BD 0.11584249 0
1 87999525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9108;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87999534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 87999644 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 87999764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5103;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87999862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 87999872 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0070;AVGPOST=0.9959;RSQ=0.7800;ERATE=0.0007;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 87999926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9382;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 87999938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0030;AVGPOST=0.9979;RSQ=0.7293;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 87999956 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4101;ERATE=0.0010;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 87999980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5915;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88000009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6697;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88000059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7058;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88000094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5634;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88000126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.8184;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88000133 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0314;AVGPOST=0.9973;RSQ=0.9672;ERATE=0.0005;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 88000254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.814;BRSQ=0.064;LDAF=0.1812;AVGPOST=0.7639;RSQ=0.3644;ERATE=0.0141;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 88000408 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.508;LDAF=0.1044;AVGPOST=0.8952;RSQ=0.5831;ERATE=0.0054;THETA=0.0002;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 88000466 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.906;BRSQ=0.813;LDAF=0.3309;AVGPOST=0.8371;RSQ=0.7289;ERATE=0.0150;THETA=0.0003;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 88000495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.599;BRSQ=0.249;LDAF=0.6424;AVGPOST=0.6930;RSQ=0.4542;ERATE=0.0278;THETA=0.0002;AC=1518;AN=2184 GT:DS:GL:BD 0.69505495 1
1 88000534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.759;BRSQ=0.464;LDAF=0.3154;AVGPOST=0.8136;RSQ=0.6725;ERATE=0.0105;THETA=0.0004;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 88000560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.920;LDAF=0.0780;AVGPOST=0.9789;RSQ=0.8888;ERATE=0.0014;THETA=0.0004;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 88000602 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.974;LDAF=0.2337;AVGPOST=0.9797;RSQ=0.9618;ERATE=0.0017;THETA=0.0024;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 88000632 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.317;LDAF=0.0215;AVGPOST=0.9727;RSQ=0.4736;ERATE=0.0015;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 88000845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.8806;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88000964 . G GT 173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.4207;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88001096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5618;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88001110 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.939;LDAF=0.3389;AVGPOST=0.9833;RSQ=0.9737;ERATE=0.0018;THETA=0.0007;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 88001135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0194;AVGPOST=0.9959;RSQ=0.9185;ERATE=0.0005;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 88001159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3407;AVGPOST=0.9958;RSQ=0.9930;ERATE=0.0010;THETA=0.0003;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 88001209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.783;LDAF=0.0358;AVGPOST=0.9851;RSQ=0.8515;ERATE=0.0004;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 88001215 . C CA 205 PASS INDEL;BAVGPOST=0.987;BRSQ=0.558;LDAF=0.0290;AVGPOST=0.9653;RSQ=0.5069;ERATE=0.0071;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 88001283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3401;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 88001367 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0059;AVGPOST=0.9973;RSQ=0.8439;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88001410 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.998;LDAF=0.3367;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 88001421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7428;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88001559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0939;AVGPOST=0.9985;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 88001599 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9197;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88001763 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88001847 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88001910 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5990;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88002007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88002014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.6295;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88002018 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8710;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88002224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0070;AVGPOST=0.9977;RSQ=0.8534;ERATE=0.0006;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88002333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.1780;AVGPOST=0.9933;RSQ=0.9845;ERATE=0.0004;THETA=0.0011;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 88002767 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1356;AVGPOST=0.9973;RSQ=0.9903;ERATE=0.0005;THETA=0.0004;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 88002845 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88002863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9570;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88002882 rs113799849 C CA 53121 PASS INDEL;BAVGPOST=0.987;BRSQ=0.985;LDAF=0.5024;AVGPOST=0.9822;RSQ=0.9730;ERATE=0.0016;THETA=0.0037;AC=1096;AN=2184 GT:DS:GL:BD 0.50183153 1
1 88002960 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.6069;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88002977 . TC T 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8300;ERATE=0.0004;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88003030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7563;ERATE=0.0005;THETA=0.0141;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88003086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88003106 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0267;AVGPOST=0.9970;RSQ=0.9584;ERATE=0.0003;THETA=0.0123;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 88003144 . T TA 637 PASS INDEL;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8911;ERATE=0.0003;THETA=0.0058;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88003166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88003335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7907;ERATE=0.0003;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88003336 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8338;ERATE=0.0007;THETA=0.0048;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88003350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0177;AVGPOST=0.9980;RSQ=0.9531;ERATE=0.0003;THETA=0.0058;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 88003514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88003524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8650;ERATE=0.0003;THETA=0.0058;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88003538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6652;ERATE=0.0003;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88003593 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0073;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88003596 . C CT 121 PASS INDEL;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8463;ERATE=0.0003;THETA=0.0099;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88003669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.956;LDAF=0.6733;AVGPOST=0.9710;RSQ=0.9516;ERATE=0.0101;THETA=0.0117;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 88003787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0196;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88003808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.960;LDAF=0.0332;AVGPOST=0.9974;RSQ=0.9650;ERATE=0.0022;THETA=0.0023;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 88003846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9824;ERATE=0.0003;THETA=0.0155;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88003952 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9334;ERATE=0.0004;THETA=0.0181;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88003989 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7638;ERATE=0.0004;THETA=0.0272;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88003993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88004039 . A AC 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0003;THETA=0.0085;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88004187 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8559;ERATE=0.0004;THETA=0.0316;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88004455 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.643;LDAF=0.0151;AVGPOST=0.9876;RSQ=0.6800;ERATE=0.0035;THETA=0.0271;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 88004640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0165;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88004841 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6720;ERATE=0.0004;THETA=0.0333;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88004851 . GA G 138 PASS INDEL;BAVGPOST=0.990;BRSQ=0.665;LDAF=0.0073;AVGPOST=0.9940;RSQ=0.6719;ERATE=0.0012;THETA=0.0162;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88004895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0237;AVGPOST=0.9983;RSQ=0.9716;ERATE=0.0003;THETA=0.0117;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 88004928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88004947 . ACTCT A 993 PASS INDEL;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0087;AVGPOST=0.9937;RSQ=0.7483;ERATE=0.0005;THETA=0.0102;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88004996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0078;AVGPOST=0.9992;RSQ=0.9568;ERATE=0.0003;THETA=0.0104;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 88005034 . TTC T 1941 PASS INDEL;BAVGPOST=0.978;BRSQ=0.941;LDAF=0.1736;AVGPOST=0.9805;RSQ=0.9496;ERATE=0.0009;THETA=0.0038;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 88005120 . TC T 15113 PASS INDEL;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.1807;AVGPOST=0.9896;RSQ=0.9745;ERATE=0.0004;THETA=0.0102;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 88005121 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1840;AVGPOST=0.9977;RSQ=0.9939;ERATE=0.0004;THETA=0.0040;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 88005173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1838;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0004;THETA=0.0010;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 88005293 . AG A 38 PASS INDEL;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88005364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1844;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0004;THETA=0.0007;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 88005529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88005532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9877;ERATE=0.0003;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88005537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88005743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88006003 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88006023 . TCAAA T 6295 PASS INDEL;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.0486;AVGPOST=0.9981;RSQ=0.9829;ERATE=0.0004;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 88006040 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4849;AVGPOST=0.9954;RSQ=0.9926;ERATE=0.0006;THETA=0.0004;AC=1060;AN=2184 GT:DS:GL:BD 0.48534799 0
1 88006061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1842;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0007;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 88006081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5554;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88006164 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88006176 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0061;AVGPOST=0.9962;RSQ=0.7561;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88006242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7333;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88006247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4865;AVGPOST=0.9951;RSQ=0.9925;ERATE=0.0005;THETA=0.0003;AC=1062;AN=2184 GT:DS:GL:BD 0.48626372 0
1 88006268 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6115;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88006328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88006521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8706;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88006530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1856;AVGPOST=0.9967;RSQ=0.9919;ERATE=0.0005;THETA=0.0006;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 88006552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0493;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 88006661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0124;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 88006940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7360;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88006941 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88007204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0124;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 88007209 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9314;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88007286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88007318 . TC T 1146 PASS INDEL;BAVGPOST=0.870;BRSQ=0.410;LDAF=0.1814;AVGPOST=0.8058;RSQ=0.4360;ERATE=0.0372;THETA=0.0011;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 88007432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.874;LDAF=0.8270;AVGPOST=0.9594;RSQ=0.8935;ERATE=0.0042;THETA=0.0009;AC=1823;AN=2184 GT:DS:GL:BD 0.83470696 1
1 88007433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0238;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0027;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 88007546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7079;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88007605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.916;LDAF=0.0127;AVGPOST=0.9965;RSQ=0.8878;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 88007673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88007733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0256;AVGPOST=0.9984;RSQ=0.9776;ERATE=0.0003;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 88007806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.993;LDAF=0.6538;AVGPOST=0.9949;RSQ=0.9921;ERATE=0.0006;THETA=0.0006;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 88007887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8612;ERATE=0.0007;THETA=0.0022;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88007930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.558;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7833;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88008026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6215;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88008088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88008134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8453;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88008136 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6694;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88008274 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88008335 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88008342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7931;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88008391 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5685;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88008599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9740;ERATE=0.0004;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88008645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88008663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.8268;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88008740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5372;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88008768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.902;LDAF=0.8359;AVGPOST=0.9754;RSQ=0.9332;ERATE=0.0008;THETA=0.0008;AC=1833;AN=2184 GT:DS:GL:BD 0.83928573 1
1 88008944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1485;AVGPOST=0.9884;RSQ=0.9674;ERATE=0.0011;THETA=0.0007;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 88008953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.883;LDAF=0.8144;AVGPOST=0.9312;RSQ=0.8269;ERATE=0.0055;THETA=0.0009;AC=1817;AN=2184 GT:DS:GL:BD 0.83195972 1
1 88008976 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5301;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88009030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4099;ERATE=0.0006;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88009072 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.852;LDAF=0.0201;AVGPOST=0.9885;RSQ=0.7802;ERATE=0.0007;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 88009094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.911;LDAF=0.8633;AVGPOST=0.9816;RSQ=0.9434;ERATE=0.0022;THETA=0.0008;AC=1889;AN=2184 GT:DS:GL:BD 0.86492676 1
1 88009108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4409;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88009158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8692;AVGPOST=0.9983;RSQ=0.9940;ERATE=0.0004;THETA=0.0006;AC=1899;AN=2184 GT:DS:GL:BD 0.86950547 1
1 88009280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0101;AVGPOST=0.9973;RSQ=0.8883;ERATE=0.0006;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88009356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.479;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4711;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88009367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0027;AVGPOST=0.9960;RSQ=0.4280;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88009452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9957;RSQ=0.7742;ERATE=0.0006;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88009644 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88009666 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.974;LDAF=0.8627;AVGPOST=0.9872;RSQ=0.9580;ERATE=0.0013;THETA=0.0003;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 88009740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0091;AVGPOST=0.9959;RSQ=0.8006;ERATE=0.0008;THETA=0.0020;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 88009752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.696;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7446;ERATE=0.0005;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88009917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6354;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88009933 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.966;LDAF=0.8655;AVGPOST=0.9936;RSQ=0.9784;ERATE=0.0008;THETA=0.0024;AC=1893;AN=2184 GT:DS:GL:BD 0.86675823 1
1 88009944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0059;AVGPOST=0.9977;RSQ=0.8727;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88010014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5286;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88010028 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7492;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88010286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88010326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.9045;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88010346 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7275;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88010558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0063;AVGPOST=0.9976;RSQ=0.8579;ERATE=0.0006;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88010756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88010807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8956;ERATE=0.0004;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88010937 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1712;AVGPOST=0.9958;RSQ=0.9893;ERATE=0.0006;THETA=0.0041;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 88011005 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88011162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88011257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1567;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0016;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 88011440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9368;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88011550 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88011671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6243;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88011677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8028;ERATE=0.0005;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88011954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5309;ERATE=0.0003;THETA=0.0048;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88011982 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.936;BRSQ=0.858;LDAF=0.8449;AVGPOST=0.9563;RSQ=0.8726;ERATE=0.0037;THETA=0.0006;AC=1870;AN=2184 GT:DS:GL:BD 0.85622710 1
1 88012138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.3578;ERATE=0.0005;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88012288 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.8039;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88012371 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0040;AVGPOST=0.9980;RSQ=0.8173;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88012407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9970;RSQ=0.4334;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88012538 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7794;AVGPOST=0.9979;RSQ=0.9948;ERATE=0.0006;THETA=0.0006;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 88012615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9834;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88012662 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.831;LDAF=0.0467;AVGPOST=0.9781;RSQ=0.8014;ERATE=0.0034;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 88012709 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.887;LDAF=0.4319;AVGPOST=0.9078;RSQ=0.8610;ERATE=0.0205;THETA=0.0007;AC=943;AN=2184 GT:DS:GL:BD 0.43177655 0
1 88012711 rs5776196 T TA 151 PASS INDEL;BAVGPOST=0.970;BRSQ=0.482;LDAF=0.0302;AVGPOST=0.9823;RSQ=0.7749;ERATE=0.0007;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 88012711 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.541;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5780;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88012737 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.784;LDAF=0.0068;AVGPOST=0.9972;RSQ=0.8463;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88012773 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88012820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88012843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8901;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88012946 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5817;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88013324 . G GA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.553;LDAF=0.0038;AVGPOST=0.9950;RSQ=0.4861;ERATE=0.0012;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88013464 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8730;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88013591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88013717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88013783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0048;AVGPOST=0.9980;RSQ=0.8326;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88013919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7131;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88013922 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4643;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88013931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4350;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0011;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 88013950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88013985 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0648;AVGPOST=0.9995;RSQ=0.9962;ERATE=0.0003;THETA=0.0012;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 88014014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88014104 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4350;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0007;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 88014111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0075;AVGPOST=0.9991;RSQ=0.9570;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88014118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88014129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4349;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 88014242 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88014294 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9989;RSQ=0.9828;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 88014329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88014564 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88014636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 88014702 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7530;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88014722 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88014757 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5037;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=1102;AN=2184 GT:DS:GL:BD 0.50457877 1
1 88014823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8833;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88014901 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0027;AVGPOST=0.9978;RSQ=0.6600;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88015074 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9982;RSQ=0.7844;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88015100 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88015223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0032;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88015241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88015373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.4220;AVGPOST=0.9936;RSQ=0.9905;ERATE=0.0053;THETA=0.0005;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 88015404 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88015470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5003;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=1093;AN=2184 GT:DS:GL:BD 0.50045788 1
1 88015534 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8569;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88015622 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9897;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88015728 . G GA 715 PASS INDEL;BAVGPOST=0.987;BRSQ=0.521;LDAF=0.0154;AVGPOST=0.9854;RSQ=0.6461;ERATE=0.0016;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 88015756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88015771 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.661;LDAF=0.0033;AVGPOST=0.9966;RSQ=0.5808;ERATE=0.0012;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88015859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.622;BRSQ=0.277;LDAF=0.4141;AVGPOST=0.6595;RSQ=0.3970;ERATE=0.0298;THETA=0.0004;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 88015945 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.643;BRSQ=0.291;LDAF=0.4093;AVGPOST=0.6757;RSQ=0.4343;ERATE=0.0152;THETA=0.0005;AC=834;AN=2184 GT:DS:GL:BD 0.38186812 0
1 88015946 . AT A 6679 PASS INDEL;BAVGPOST=0.864;BRSQ=0.296;LDAF=0.9089;AVGPOST=0.8951;RSQ=0.5379;ERATE=0.0032;THETA=0.0004;AC=2049;AN=2184 GT:DS:GL:BD 0.93818682 1
1 88015960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88016068 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88016253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88016321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0166;AVGPOST=0.9991;RSQ=0.9768;ERATE=0.0005;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 88016328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88016370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 88016469 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8701;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88016474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88016537 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3392;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0004;THETA=0.0005;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 88016831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88016914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88017032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88017061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88017181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88017267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4090;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 88017290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88017322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9498;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88017341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0150;AVGPOST=0.9975;RSQ=0.9364;ERATE=0.0003;THETA=0.0012;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 88017389 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0083;AVGPOST=0.9994;RSQ=0.9700;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88017390 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88017404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7153;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88017465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7761;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88017498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88017787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5956;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88017899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88018097 . CTT C 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6985;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88018158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9320;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88018229 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0879;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 88018260 . CTG C 1305 PASS INDEL;BAVGPOST=0.995;BRSQ=0.801;LDAF=0.0117;AVGPOST=0.9947;RSQ=0.8354;ERATE=0.0003;THETA=0.0016;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88018305 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0103;AVGPOST=0.9984;RSQ=0.9372;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88018487 . G GT 302 PASS INDEL;BAVGPOST=0.974;BRSQ=0.503;LDAF=0.0517;AVGPOST=0.9358;RSQ=0.4791;ERATE=0.0124;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 88018592 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0884;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 88018730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0420;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 88018890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88018914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8181;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88018986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5563;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88019132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5290;AVGPOST=0.9963;RSQ=0.9937;ERATE=0.0008;THETA=0.0003;AC=1155;AN=2184 GT:DS:GL:BD 0.52884614 1
1 88019144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8845;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88019322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88019470 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8830;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88019546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6872;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88019577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9106;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88019666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9188;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88019741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6227;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88019970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0570;AVGPOST=0.9982;RSQ=0.9882;ERATE=0.0004;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 88019978 . AG A 1837 PASS INDEL;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0939;AVGPOST=0.9988;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 88020043 rs60030195 GC G 11211 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0951;AVGPOST=0.9981;RSQ=0.9908;ERATE=0.0004;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 88020044 . T TC 7064 PASS INDEL;BAVGPOST=0.937;BRSQ=0.887;LDAF=0.4865;AVGPOST=0.9000;RSQ=0.8526;ERATE=0.0250;THETA=0.0003;AC=1089;AN=2184 GT:DS:GL:BD 0.49862638 0
1 88020252 rs36010345 C CT 56374 PASS INDEL;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5398;AVGPOST=0.9890;RSQ=0.9840;ERATE=0.0014;THETA=0.0003;AC=1174;AN=2184 GT:DS:GL:BD 0.53754580 1
1 88020254 . CAAAG C 196 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6526;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88020325 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9322;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88020475 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9506;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88021014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2198;AVGPOST=0.9978;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 88021064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88021294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0587;AVGPOST=0.9985;RSQ=0.9886;ERATE=0.0005;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 88021317 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88021398 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5940;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88021457 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8895;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88021490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0052;AVGPOST=0.9990;RSQ=0.9343;ERATE=0.0005;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88021666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.838;LDAF=0.0178;AVGPOST=0.9963;RSQ=0.9118;ERATE=0.0004;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 88021827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1002;AVGPOST=0.9954;RSQ=0.9825;ERATE=0.0005;THETA=0.0002;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 88021932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.932;LDAF=0.0718;AVGPOST=0.9966;RSQ=0.9782;ERATE=0.0005;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 88022041 rs72269936 T TAA 6025 PASS INDEL;BAVGPOST=0.779;BRSQ=0.600;LDAF=0.5797;AVGPOST=0.7697;RSQ=0.6395;ERATE=0.0201;THETA=0.0002;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 88022105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6351;AVGPOST=0.9974;RSQ=0.9961;ERATE=0.0004;THETA=0.0001;AC=1389;AN=2184 GT:DS:GL:BD 0.63598901 1
1 88022207 rs71670250 TC T 1366 PASS INDEL;BAVGPOST=0.953;BRSQ=0.823;LDAF=0.1418;AVGPOST=0.9738;RSQ=0.9271;ERATE=0.0014;THETA=0.0003;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 88022296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88022452 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9546;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 88022482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.961;LDAF=0.6139;AVGPOST=0.9581;RSQ=0.9391;ERATE=0.0049;THETA=0.0003;AC=1356;AN=2184 GT:DS:GL:BD 0.62087911 1
1 88022576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7519;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88022577 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.934;LDAF=0.6075;AVGPOST=0.9389;RSQ=0.9103;ERATE=0.0116;THETA=0.0002;AC=1354;AN=2184 GT:DS:GL:BD 0.61996335 1
1 88022643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88022657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0026;AVGPOST=0.9961;RSQ=0.5308;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88022873 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88022921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6901;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88023114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6833;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88023116 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7698;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88023160 . GA G 1753 PASS INDEL;BAVGPOST=0.963;BRSQ=0.717;LDAF=0.0582;AVGPOST=0.9572;RSQ=0.7349;ERATE=0.0047;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 88023296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4399;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 88023395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7254;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88023463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6149;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88023508 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.960;LDAF=0.1384;AVGPOST=0.9923;RSQ=0.9761;ERATE=0.0007;THETA=0.0003;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 88023519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0159;AVGPOST=0.9994;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 88023553 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5316;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88023908 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88023932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6425;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88023933 . TTAA T 1853 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0109;AVGPOST=0.9982;RSQ=0.9410;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 88024000 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8800;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88024174 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9241;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88024197 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.888;LDAF=0.0143;AVGPOST=0.9963;RSQ=0.9054;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 88024300 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5919;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88024304 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5202;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88024350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5924;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88024398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7804;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88024416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88024431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8855;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88024548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88024567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6338;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88024764 . A AG 49 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6949;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88024794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5796;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88024864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1648;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 88024893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6720;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88025011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8695;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88025020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5146;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88025077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2272;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0006;THETA=0.0002;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 88025106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1649;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 88025136 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88025141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0182;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 88025238 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.790;LDAF=0.0324;AVGPOST=0.9835;RSQ=0.8148;ERATE=0.0008;THETA=0.0002;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 88025266 . TAAAAG T 578 PASS INDEL;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0057;AVGPOST=0.9968;RSQ=0.8003;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88025407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 88025477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0157;AVGPOST=0.9992;RSQ=0.9778;ERATE=0.0003;THETA=0.0015;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 88025533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7469;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88025628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0129;AVGPOST=0.9994;RSQ=0.9815;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 88025724 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0066;AVGPOST=0.9959;RSQ=0.7707;ERATE=0.0008;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88025756 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7730;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88026228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88026251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3913;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0005;THETA=0.0001;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 88026256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8344;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88026319 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1649;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 88026407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88026437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0146;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0002;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 88026618 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0171;AVGPOST=0.9956;RSQ=0.8996;ERATE=0.0003;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 88026756 rs71068856 TG T 15943 PASS INDEL;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1393;AVGPOST=0.9951;RSQ=0.9865;ERATE=0.0005;THETA=0.0010;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 88026775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7531;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88026913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.6507;AVGPOST=0.9964;RSQ=0.9945;ERATE=0.0007;THETA=0.0032;AC=1423;AN=2184 GT:DS:GL:BD 0.65155679 1
1 88027000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0150;AVGPOST=0.9993;RSQ=0.9805;ERATE=0.0002;THETA=0.0094;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 88027076 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88027104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1858;AVGPOST=0.9981;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 88027189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4546;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88027426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8482;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88027496 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8862;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88027520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6717;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88027535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7900;ERATE=0.0002;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88027543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8351;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88027799 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88027833 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88027835 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9089;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88027860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5077;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88027872 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88027925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7765;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88027955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88028046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9896;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 88028120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1023;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 88028199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.1760;AVGPOST=0.9967;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 88028288 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.7517;AVGPOST=0.9959;RSQ=0.9925;ERATE=0.0008;THETA=0.0005;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 88028342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6789;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88028496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0045;AVGPOST=0.9982;RSQ=0.8450;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88028541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7930;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88028682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1024;AVGPOST=0.9991;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 88028702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9995;RSQ=0.0578;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 88028732 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0739;AVGPOST=0.9950;RSQ=0.9771;ERATE=0.0003;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 88028766 . AG A 4346 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0186;AVGPOST=0.9984;RSQ=0.9627;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 88028911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88029044 . T TC 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7448;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88029066 . TG T 34024 PASS INDEL;BAVGPOST=0.979;BRSQ=0.849;LDAF=0.9155;AVGPOST=0.9477;RSQ=0.7537;ERATE=0.0063;THETA=0.0004;AC=2029;AN=2184 GT:DS:GL:BD 0.92902929 1
1 88029335 . T TTG 15 PASS INDEL;BAVGPOST=0.998;BRSQ=0.612;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6245;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88029347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88029393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.872;LDAF=0.0118;AVGPOST=0.9984;RSQ=0.9381;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 88029403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7642;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88029492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9264;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88029582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0205;AVGPOST=0.9975;RSQ=0.9511;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 88029586 . TA T 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.5828;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88029724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0158;AVGPOST=0.9993;RSQ=0.9832;ERATE=0.0002;THETA=0.0001;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 88029744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88029887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88029923 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88029992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9347;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88030018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7798;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88030079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0109;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0002;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 88030103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88030127 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6665;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88030165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9870;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88030194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9516;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88030310 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4919;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88030410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0119;AVGPOST=0.9987;RSQ=0.9559;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 88030511 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0150;AVGPOST=0.9991;RSQ=0.9795;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 88030629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88030687 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6726;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88030733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88030795 . C CA 379 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7914;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88030874 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1460;AVGPOST=0.9961;RSQ=0.9883;ERATE=0.0004;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 88030928 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6993;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88031036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1021;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0002;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 88031109 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6460;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88031190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0086;AVGPOST=0.9997;RSQ=0.9839;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88031292 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0801;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 88031323 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.7928;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88031399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9521;AVGPOST=0.9986;RSQ=0.9878;ERATE=0.0005;THETA=0.0006;AC=2080;AN=2184 GT:DS:GL:BD 0.95238096 1
1 88031457 . TG T 3233 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0298;AVGPOST=0.9986;RSQ=0.9797;ERATE=0.0003;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 88031529 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88031604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6860;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88031656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88031709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9651;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88031760 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0127;AVGPOST=0.9982;RSQ=0.9398;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 88031796 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1023;AVGPOST=0.9984;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 88031847 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7700;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88031892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7577;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88031926 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1024;AVGPOST=0.9986;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88031976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9355;ERATE=0.0002;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88031989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5324;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88032079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9495;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88032144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88032382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88032387 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1019;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 88032411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9910;AVGPOST=0.9994;RSQ=0.9688;ERATE=0.0003;THETA=0.0007;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 88032588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7672;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88032651 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.634;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4936;ERATE=0.0006;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88032809 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5247;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88032810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88032969 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0028;AVGPOST=0.9966;RSQ=0.5466;ERATE=0.0008;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88032993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.530;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88033082 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0863;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 88033208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88033230 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7371;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88033560 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88033683 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8953;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88033748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9995;RSQ=0.0496;ERATE=0.0003;THETA=0.0022;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 88033866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0107;AVGPOST=0.9987;RSQ=0.9548;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 88033888 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88033896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5000;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88033972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88033992 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0090;AVGPOST=0.9992;RSQ=0.9594;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88034217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6511;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88034256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6513;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88034327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2703;AVGPOST=0.9947;RSQ=0.9907;ERATE=0.0009;THETA=0.0002;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 88034674 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0278;AVGPOST=0.9993;RSQ=0.9881;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 88034679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88034707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.9106;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88034901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9111;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88034917 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0861;AVGPOST=0.9981;RSQ=0.9909;ERATE=0.0005;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 88034932 . TTTATC T 116 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5241;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88035121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88035201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9959;RSQ=0.6532;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88035224 . T TAA 1224 PASS INDEL;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0109;AVGPOST=0.9974;RSQ=0.8993;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 88035231 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6518;ERATE=0.0004;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88035265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.9011;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88035391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8533;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88035468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4917;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88035570 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1490;AVGPOST=0.9984;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 88035697 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5441;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88035789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88035949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.851;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8473;ERATE=0.0005;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88036061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9115;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88036342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6900;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88036436 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88036599 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6814;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88036624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8056;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88036643 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88036701 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6491;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88036746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8853;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88036762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9604;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88036952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1392;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0004;THETA=0.0006;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 88037102 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1507;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 88037214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9307;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88037220 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1395;AVGPOST=0.9981;RSQ=0.9940;ERATE=0.0006;THETA=0.0003;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 88037286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0144;AVGPOST=0.9993;RSQ=0.9781;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88037481 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7398;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88037515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88037536 . GA G 186 PASS INDEL;BAVGPOST=0.987;BRSQ=0.450;LDAF=0.0219;AVGPOST=0.9687;RSQ=0.4193;ERATE=0.0072;THETA=0.0011;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88037572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0566;AVGPOST=0.9993;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 88037590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8735;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88037613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88037789 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88037797 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88037799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88037895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9477;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88037981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88037992 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0384;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 88038147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.8993;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88038182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7369;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88038242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9153;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88038484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0057;AVGPOST=0.9968;RSQ=0.8066;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88038505 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88038629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88038650 . TG T 4 PASS INDEL;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4413;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88038657 . G GT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4770;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88038661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8799;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88038750 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3228;AVGPOST=0.9987;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 88038805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9181;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88039020 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88039121 . TG T 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88039192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6150;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88039194 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0111;AVGPOST=0.9991;RSQ=0.9652;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 88039346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.7411;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88039438 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9985;RSQ=0.9283;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88039526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88039531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88039534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6720;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88039566 . GCA G 318 PASS INDEL;BAVGPOST=0.983;BRSQ=0.665;LDAF=0.0395;AVGPOST=0.9574;RSQ=0.5343;ERATE=0.0156;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 88039590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9333;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88039638 . CT C 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5104;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88039639 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6979;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88039720 . T TGA 2939 PASS INDEL;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0138;AVGPOST=0.9971;RSQ=0.9187;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 88039733 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0138;AVGPOST=0.9970;RSQ=0.9158;ERATE=0.0003;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 88039735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5169;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88039736 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5040;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88039941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5202;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88040083 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88040181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0239;AVGPOST=0.9979;RSQ=0.9636;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 88040271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8072;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88040604 rs113140827 T TG 6410 PASS INDEL;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1115;AVGPOST=0.9864;RSQ=0.9509;ERATE=0.0016;THETA=0.0005;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 88040748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0088;AVGPOST=0.9988;RSQ=0.9425;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88040890 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8442;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88040976 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5368;ERATE=0.0009;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88041130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0251;AVGPOST=0.9988;RSQ=0.9814;ERATE=0.0003;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 88041160 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6819;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88041273 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3238;AVGPOST=0.9970;RSQ=0.9941;ERATE=0.0007;THETA=0.0005;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 88041473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0047;AVGPOST=0.9964;RSQ=0.7071;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88041548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88041567 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88041609 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 88041704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5898;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88041717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88041790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3239;AVGPOST=0.9937;RSQ=0.9885;ERATE=0.0020;THETA=0.0005;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 88041832 . TG T 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4327;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88041866 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88042046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0050;AVGPOST=0.9993;RSQ=0.9403;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88042212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88042269 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6238;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88042350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88042480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.706;LDAF=0.0095;AVGPOST=0.9901;RSQ=0.5825;ERATE=0.0016;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88042707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9274;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88042857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5752;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88042934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.6928;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88042978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9866;AVGPOST=0.9980;RSQ=0.9476;ERATE=0.0003;THETA=0.0007;AC=2155;AN=2184 GT:DS:GL:BD 0.98672163 1
1 88043182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0335;AVGPOST=0.9985;RSQ=0.9826;ERATE=0.0004;THETA=0.0008;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 88043237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.489;LDAF=0.0024;AVGPOST=0.9966;RSQ=0.4072;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88043412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.538;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7690;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88043494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0040;AVGPOST=0.9948;RSQ=0.5197;ERATE=0.0013;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88043506 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7446;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88043773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5534;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88043876 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.7963;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0017;AC=1739;AN=2184 GT:DS:GL:BD 0.79624540 1
1 88044014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88044024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4632;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88044031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0002;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88044256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88044308 . G GC 798 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9369;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88044325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0035;AVGPOST=0.9997;RSQ=0.9666;ERATE=0.0002;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88044328 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.9981;AVGPOST=0.9993;RSQ=0.8482;ERATE=0.0004;THETA=0.0010;AC=2180;AN=2184 GT:DS:GL:BD 0.99816847 1
1 88044377 rs60870853 GAA G 2532 PASS INDEL;BAVGPOST=0.996;BRSQ=0.921;LDAF=0.0200;AVGPOST=0.9984;RSQ=0.9701;ERATE=0.0002;THETA=0.0016;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 88044379 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88044562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5796;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88044601 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88044830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0630;AVGPOST=0.9970;RSQ=0.9829;ERATE=0.0003;THETA=0.0006;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 88045023 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7976;AVGPOST=0.9972;RSQ=0.9936;ERATE=0.0004;THETA=0.0013;AC=1743;AN=2184 GT:DS:GL:BD 0.79807693 1
1 88045119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6458;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88045143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9427;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88045344 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.969;LDAF=0.7845;AVGPOST=0.9862;RSQ=0.9723;ERATE=0.0011;THETA=0.0011;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 88045399 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7981;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0010;AC=1743;AN=2184 GT:DS:GL:BD 0.79807693 1
1 88045526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7982;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0003;THETA=0.0008;AC=1743;AN=2184 GT:DS:GL:BD 0.79807693 1
1 88045579 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7983;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0009;AC=1743;AN=2184 GT:DS:GL:BD 0.79807693 1
1 88045602 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88045605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.8971;ERATE=0.0005;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88045667 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7968;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0011;AC=1740;AN=2184 GT:DS:GL:BD 0.79670328 1
1 88045696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7971;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0017;AC=1740;AN=2184 GT:DS:GL:BD 0.79670328 1
1 88045789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8568;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88045873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8554;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88045898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88045987 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8043;ERATE=0.0002;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88046034 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9643;ERATE=0.0003;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88046037 rs61011546 AC A 3867 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0239;AVGPOST=0.9987;RSQ=0.9765;ERATE=0.0005;THETA=0.0012;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 88046202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9711;ERATE=0.0002;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88046206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8843;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88046209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88046351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8192;ERATE=0.0003;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88046645 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8198;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88046943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 88046960 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88047109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9740;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88047159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88047223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7629;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=1665;AN=2184 GT:DS:GL:BD 0.76236266 1
1 88047273 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88047284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88047385 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0002;THETA=0.0016;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 88047394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.646;LDAF=0.0085;AVGPOST=0.9911;RSQ=0.6147;ERATE=0.0009;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88047431 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88047494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88047510 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7912;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0003;THETA=0.0009;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 88047567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.952;LDAF=0.0498;AVGPOST=0.9955;RSQ=0.9603;ERATE=0.0004;THETA=0.0007;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 88047601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7908;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0005;THETA=0.0007;AC=1726;AN=2184 GT:DS:GL:BD 0.79029304 1
1 88047610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1193;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 88047696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1192;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0003;THETA=0.0001;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 88047742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1196;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 88047744 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1162;AVGPOST=0.9973;RSQ=0.9904;ERATE=0.0004;THETA=0.0004;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 88047768 rs34367642 TA T 8597 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1206;AVGPOST=0.9967;RSQ=0.9865;ERATE=0.0008;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 88047826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7151;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88047844 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88047902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1202;AVGPOST=0.9984;RSQ=0.9934;ERATE=0.0005;THETA=0.0002;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 88047950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88047992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88047995 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9297;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88048019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1196;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 88048057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88048062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88048207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1194;AVGPOST=0.9981;RSQ=0.9939;ERATE=0.0004;THETA=0.0002;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 88048208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6589;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88048275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0611;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 88048366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4918;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=1075;AN=2184 GT:DS:GL:BD 0.49221611 0
1 88048374 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1212;AVGPOST=0.9947;RSQ=0.9809;ERATE=0.0008;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 88048393 . TCA T 654 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7515;ERATE=0.0014;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88048437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88048463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.9748;AVGPOST=0.9970;RSQ=0.9513;ERATE=0.0006;THETA=0.0001;AC=2131;AN=2184 GT:DS:GL:BD 0.97573262 1
1 88048472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1193;AVGPOST=0.9991;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 88048534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88048600 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7066;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88048675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7173;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88048723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3720;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 88048826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88048869 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88048910 rs71712069 CTG C 593 PASS INDEL;BAVGPOST=0.996;BRSQ=0.822;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.9037;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88048912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8434;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88048928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9548;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88048936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4945;AVGPOST=0.9983;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1079;AN=2184 GT:DS:GL:BD 0.49404761 0
1 88048942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3057;AVGPOST=0.9967;RSQ=0.9946;ERATE=0.0010;THETA=0.0002;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 88048972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88049002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0658;AVGPOST=0.9983;RSQ=0.9897;ERATE=0.0007;THETA=0.0002;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 88049003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8384;ERATE=0.0003;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88049021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7912;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88049126 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0643;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0001;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 88049234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3732;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0031;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 88049266 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1190;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0037;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 88049397 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8443;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88049406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9605;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88049479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0607;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0014;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 88049562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2399;AVGPOST=0.9928;RSQ=0.9848;ERATE=0.0019;THETA=0.0067;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 88049616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8460;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88049634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.0872;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88049661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.693;LDAF=0.9913;AVGPOST=0.9948;RSQ=0.7630;ERATE=0.0010;THETA=0.0003;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 88049716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.955;LDAF=0.4600;AVGPOST=0.9673;RSQ=0.9550;ERATE=0.0110;THETA=0.0002;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 88049717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.1838;AVGPOST=0.9944;RSQ=0.9856;ERATE=0.0005;THETA=0.0013;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 88049808 . TC T 133 PASS INDEL;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88049824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2526;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0003;THETA=0.0023;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 88049856 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8276;ERATE=0.0003;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88049912 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0101;AVGPOST=0.9993;RSQ=0.9687;ERATE=0.0004;THETA=0.0062;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88049963 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1274;AVGPOST=0.9952;RSQ=0.9852;ERATE=0.0004;THETA=0.0005;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 88050162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0380;AVGPOST=0.9989;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 88050181 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9348;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88050258 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2198;AVGPOST=0.9968;RSQ=0.9932;ERATE=0.0004;THETA=0.0002;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 88050398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88050412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 88050457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0163;AVGPOST=0.9994;RSQ=0.9856;ERATE=0.0003;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 88050476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7332;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88050559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88050589 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88050601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 88050606 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8586;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88050642 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1185;AVGPOST=0.9985;RSQ=0.9943;ERATE=0.0003;THETA=0.0059;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 88050731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8230;ERATE=0.0015;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88050754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0376;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 88050755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1189;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0012;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 88050778 . CT C 791 PASS INDEL;BAVGPOST=0.994;BRSQ=0.803;LDAF=0.0163;AVGPOST=0.9938;RSQ=0.8561;ERATE=0.0004;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 88050896 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0221;AVGPOST=0.9974;RSQ=0.9603;ERATE=0.0004;THETA=0.0006;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 88050902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0094;AVGPOST=0.9968;RSQ=0.8667;ERATE=0.0005;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88050991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1205;AVGPOST=0.9961;RSQ=0.9857;ERATE=0.0005;THETA=0.0006;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 88051058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.1176;AVGPOST=0.9973;RSQ=0.9890;ERATE=0.0003;THETA=0.0002;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 88051114 . TTC T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6134;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88051235 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0674;AVGPOST=0.9969;RSQ=0.9846;ERATE=0.0005;THETA=0.0020;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 88051347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8449;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88051372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.814;LDAF=0.0113;AVGPOST=0.9947;RSQ=0.8156;ERATE=0.0005;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88051447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0379;AVGPOST=0.9991;RSQ=0.9907;ERATE=0.0003;THETA=0.0026;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 88051455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4876;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88051495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0124;AVGPOST=0.9983;RSQ=0.9434;ERATE=0.0004;THETA=0.0014;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 88051616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5839;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88051664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1725;AVGPOST=0.9924;RSQ=0.9792;ERATE=0.0008;THETA=0.0167;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 88051682 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0497;AVGPOST=0.9988;RSQ=0.9894;ERATE=0.0003;THETA=0.0100;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 88052003 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4609;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88052125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0213;AVGPOST=0.9985;RSQ=0.9715;ERATE=0.0004;THETA=0.0054;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 88052144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4718;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88052312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0398;AVGPOST=0.9945;RSQ=0.9560;ERATE=0.0008;THETA=0.0055;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 88052343 . CG C 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4456;ERATE=0.0006;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88052393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.975;LDAF=0.1577;AVGPOST=0.9878;RSQ=0.9673;ERATE=0.0010;THETA=0.0077;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 88052423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5794;ERATE=0.0003;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88052480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5687;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88052516 . AAT A 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4966;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88052569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88052693 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9579;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88052716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7678;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=1676;AN=2184 GT:DS:GL:BD 0.76739925 1
1 88052751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88052764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0785;AVGPOST=0.9984;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 88052819 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7665;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88052963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9679;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88052975 . GAGGGTT G 3181 PASS INDEL;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0212;AVGPOST=0.9989;RSQ=0.9756;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 88053015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1021;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88053023 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88053051 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6948;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88053067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1027;AVGPOST=0.9990;RSQ=0.9953;ERATE=0.0005;THETA=0.0005;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 88053086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88053114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4797;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88053142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8875;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88053143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6401;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88053167 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1779;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 88053190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88053369 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88053435 rs11286948 AC A 14095 PASS INDEL;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1028;AVGPOST=0.9985;RSQ=0.9937;ERATE=0.0004;THETA=0.0006;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 88053539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8546;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88053547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88053559 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7759;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88053593 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1024;AVGPOST=0.9979;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88053652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9122;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88053693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88053714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5696;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88053717 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.971;LDAF=0.0965;AVGPOST=0.9967;RSQ=0.9862;ERATE=0.0003;THETA=0.0007;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 88053738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.971;LDAF=0.0958;AVGPOST=0.9954;RSQ=0.9820;ERATE=0.0005;THETA=0.0003;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 88053739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88053758 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8590;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88053857 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6507;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0007;THETA=0.0007;AC=1421;AN=2184 GT:DS:GL:BD 0.65064102 1
1 88053886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88054055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1001;AVGPOST=0.9956;RSQ=0.9827;ERATE=0.0004;THETA=0.0005;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 88054161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.704;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7518;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88054171 . GT G 519 PASS INDEL;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0101;AVGPOST=0.9957;RSQ=0.8245;ERATE=0.0004;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88054214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7672;AVGPOST=0.9975;RSQ=0.9945;ERATE=0.0007;THETA=0.0004;AC=1676;AN=2184 GT:DS:GL:BD 0.76739925 1
1 88054312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.1016;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0002;THETA=0.0005;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88054363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.611;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5365;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88054403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.830;LDAF=0.0171;AVGPOST=0.9967;RSQ=0.9269;ERATE=0.0003;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 88054453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1023;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88054553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1019;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0002;THETA=0.0005;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88054682 . GTC G 1337 PASS INDEL;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0080;AVGPOST=0.9967;RSQ=0.8048;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88054682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0776;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0002;THETA=0.0007;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 88054730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1020;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0002;THETA=0.0004;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88054777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1019;AVGPOST=0.9985;RSQ=0.9940;ERATE=0.0005;THETA=0.0004;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88054800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7732;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88054855 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6657;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88054889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9866;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88054893 rs10646677 A ATAGT 28790 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1009;AVGPOST=0.9982;RSQ=0.9926;ERATE=0.0005;THETA=0.0005;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 88054963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88055036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5804;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0007;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 88055058 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.7881;AVGPOST=0.9981;RSQ=0.9960;ERATE=0.0005;THETA=0.0005;AC=1721;AN=2184 GT:DS:GL:BD 0.78800368 1
1 88055109 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0119;AVGPOST=0.9989;RSQ=0.9639;ERATE=0.0002;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 88055281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0983;AVGPOST=0.9982;RSQ=0.9926;ERATE=0.0003;THETA=0.0008;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 88055289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4977;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88055291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.5824;AVGPOST=0.9971;RSQ=0.9955;ERATE=0.0004;THETA=0.0003;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 88055305 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88055328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88055343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88055367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88055403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1011;AVGPOST=0.9979;RSQ=0.9922;ERATE=0.0004;THETA=0.0003;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 88055537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7463;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88055555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6580;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 88055581 rs11324678 CT C 6578 PASS INDEL;BAVGPOST=0.964;BRSQ=0.856;LDAF=0.1554;AVGPOST=0.9124;RSQ=0.7647;ERATE=0.0169;THETA=0.0011;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 88055603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4077;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88055690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1013;AVGPOST=0.9980;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88055738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.8071;AVGPOST=0.9972;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=1763;AN=2184 GT:DS:GL:BD 0.80723441 1
1 88055745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1019;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88055762 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5992;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88055835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9365;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88055836 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1022;AVGPOST=0.9988;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88055862 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5004;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88055880 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0051;AVGPOST=0.9978;RSQ=0.8306;ERATE=0.0007;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88055909 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1023;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88055910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88056093 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6747;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88056129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88056158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.784;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9628;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88056185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7714;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88056293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1011;AVGPOST=0.9979;RSQ=0.9930;ERATE=0.0002;THETA=0.0007;AC=220;AN=2184 GT:DS:GL:BD 0.10073260 0
1 88056334 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88056444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8513;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88056553 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88056574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9784;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 88056623 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0105;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 88056649 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1019;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88056727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88056800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1116;AVGPOST=0.9985;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 88056911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1117;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 88057011 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8634;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88057042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8073;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88057088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5293;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88057121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88057211 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5216;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88057236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1097;AVGPOST=0.9983;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 88057246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9989;RSQ=0.1883;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88057262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0003;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88057295 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0237;AVGPOST=0.9993;RSQ=0.9902;ERATE=0.0002;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 88057317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6595;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88057354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1117;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0009;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 88057480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6700;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88057634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0051;AVGPOST=0.9993;RSQ=0.9391;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88057647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5266;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88058022 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88058131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88058230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7490;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88058241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88058385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8068;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88058583 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9825;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88058608 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6132;AVGPOST=0.9958;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 88058654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.842;LDAF=0.0104;AVGPOST=0.9964;RSQ=0.8587;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 88058659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4226;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88058935 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9995;RSQ=0.0677;ERATE=0.0003;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 88059063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7610;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88059541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3748;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88059542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8870;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88059677 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.4093;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88059690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7305;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88059791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7224;ERATE=0.0018;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88059799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5369;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88059891 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7017;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88059961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88060003 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88060009 . TGTTACCCA T 7307 PASS INDEL;BAVGPOST=0.992;BRSQ=0.881;LDAF=0.0340;AVGPOST=0.9980;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 88060191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0051;AVGPOST=0.9968;RSQ=0.7708;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88060285 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6327;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88060373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0293;AVGPOST=0.9941;RSQ=0.9154;ERATE=0.0006;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 88060456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9362;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88060562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4436;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88060625 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5102;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88060635 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6701;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88060719 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4895;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88061196 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0003;AVGPOST=0.9993;RSQ=0.3496;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88061317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6821;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88061344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6796;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88061431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0260;AVGPOST=0.9984;RSQ=0.9730;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 88061439 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.0144;AVGPOST=0.9927;RSQ=0.8104;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 88061441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0196;AVGPOST=0.9990;RSQ=0.9812;ERATE=0.0004;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 88061477 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.651;LDAF=0.0054;AVGPOST=0.9956;RSQ=0.6735;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88061564 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0084;AVGPOST=0.9982;RSQ=0.9230;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88061613 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6682;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88061678 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0057;AVGPOST=0.9978;RSQ=0.8324;ERATE=0.0006;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88061688 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7259;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88061792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1420;AVGPOST=0.9862;RSQ=0.9544;ERATE=0.0013;THETA=0.0003;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 88061908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9623;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88061927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0254;AVGPOST=0.9957;RSQ=0.9324;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 88062005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.6435;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88062091 . TAAAC T 455 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0028;AVGPOST=0.9959;RSQ=0.3813;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88062247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88062470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3217;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88062593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5313;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88062604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6000;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88062779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88062961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9644;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88062983 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9028;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88063143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88063247 rs113300027 A AAAAT 76899 PASS INDEL;BAVGPOST=0.982;BRSQ=0.950;LDAF=0.7888;AVGPOST=0.9569;RSQ=0.9057;ERATE=0.0082;THETA=0.0003;AC=1749;AN=2184 GT:DS:GL:BD 0.80082417 1
1 88063279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.599;LDAF=0.0483;AVGPOST=0.9505;RSQ=0.5718;ERATE=0.0232;THETA=0.0007;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 88063299 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.975;LDAF=0.1379;AVGPOST=0.9950;RSQ=0.9846;ERATE=0.0007;THETA=0.0004;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 88063300 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88063309 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0113;AVGPOST=0.9964;RSQ=0.8612;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88063331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0067;AVGPOST=0.9986;RSQ=0.9170;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88063480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8901;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88063529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6301;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88063598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0077;AVGPOST=0.9997;RSQ=0.9819;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 88063602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88063603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1408;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 88063674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 88063772 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7669;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88063827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88063858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0777;AVGPOST=0.9993;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 88063916 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6055;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88064119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7888;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88064212 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4182;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88064354 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9713;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88064420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88064430 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0205;AVGPOST=0.9982;RSQ=0.9643;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 88064438 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88064472 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6942;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88064477 . C CA 130 PASS INDEL;BAVGPOST=0.998;BRSQ=0.702;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6376;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88064650 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88064659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0070;AVGPOST=0.9993;RSQ=0.9668;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88064698 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0205;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 88064834 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0025;AVGPOST=0.9990;RSQ=0.8195;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88064864 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88064865 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8243;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=1801;AN=2184 GT:DS:GL:BD 0.82463372 1
1 88065025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0279;AVGPOST=0.9995;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 88065082 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1407;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 88065102 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9131;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88065118 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5512;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88065130 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1410;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 88065143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.5079;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88065337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7287;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88065369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88065433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2833;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 88065465 . T TG 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88065532 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2823;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0003;THETA=0.0024;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 88065537 . TTG T 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88065600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5469;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88065610 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88065744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.853;LDAF=0.0265;AVGPOST=0.9921;RSQ=0.8854;ERATE=0.0004;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 88065756 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9106;AVGPOST=0.9980;RSQ=0.9899;ERATE=0.0005;THETA=0.0006;AC=1991;AN=2184 GT:DS:GL:BD 0.91163003 1
1 88065766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0791;AVGPOST=0.9972;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 88065847 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2835;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 88065925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0282;AVGPOST=0.9973;RSQ=0.9623;ERATE=0.0005;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 88066035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5994;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88066149 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1400;AVGPOST=0.9969;RSQ=0.9908;ERATE=0.0005;THETA=0.0004;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 88066167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8729;ERATE=0.0006;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88066170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0809;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 88066231 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7634;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88066272 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88066340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1145;AVGPOST=0.9985;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 88066356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0281;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 88066480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7243;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88066533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1409;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 88066577 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.734;LDAF=0.0093;AVGPOST=0.9968;RSQ=0.8568;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88066592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8241;AVGPOST=0.9986;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=1801;AN=2184 GT:DS:GL:BD 0.82463372 1
1 88066606 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6972;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88066674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1409;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 88066712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8181;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88066912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8407;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88066956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1406;AVGPOST=0.9992;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 88067019 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7981;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88067047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1408;AVGPOST=0.9988;RSQ=0.9958;ERATE=0.0005;THETA=0.0003;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 88067050 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.900;LDAF=0.0377;AVGPOST=0.9854;RSQ=0.8460;ERATE=0.0020;THETA=0.0003;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 88067059 rs71076585 C CT 2736 PASS INDEL;BAVGPOST=0.660;BRSQ=0.412;LDAF=0.5673;AVGPOST=0.7493;RSQ=0.6290;ERATE=0.0159;THETA=0.0004;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 88067060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.4021;AVGPOST=0.9872;RSQ=0.9801;ERATE=0.0014;THETA=0.0003;AC=878;AN=2184 GT:DS:GL:BD 0.40201464 0
1 88067089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2821;AVGPOST=0.9917;RSQ=0.9867;ERATE=0.0014;THETA=0.0003;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 88067107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8579;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88067114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9998;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 88067387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7297;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88067393 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7993;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88067425 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7355;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88067456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3158;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 88067461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3092;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 88067528 . G GTA 93 PASS INDEL;BAVGPOST=0.994;BRSQ=0.439;LDAF=0.0142;AVGPOST=0.9809;RSQ=0.4672;ERATE=0.0010;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88067554 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1411;AVGPOST=0.9990;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 88067562 . A ATG 537 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8373;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88067564 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1412;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0003;THETA=0.0008;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 88067651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2609;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 88067753 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1426;AVGPOST=0.9973;RSQ=0.9928;ERATE=0.0004;THETA=0.0005;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 88067790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2828;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 88067831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88067889 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7493;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88068015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5174;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88068022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5228;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88068024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0280;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 88068053 . GT G 470 PASS INDEL;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0057;AVGPOST=0.9989;RSQ=0.9212;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88068065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3365;AVGPOST=0.9934;RSQ=0.9888;ERATE=0.0017;THETA=0.0003;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 88068090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6305;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88068202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7206;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88068368 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9116;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88068378 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88068393 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9329;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88068428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.804;LDAF=0.0140;AVGPOST=0.9946;RSQ=0.8532;ERATE=0.0004;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 88068453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9845;AVGPOST=0.9989;RSQ=0.9665;ERATE=0.0006;THETA=0.0006;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 88068506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88068598 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88068651 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88068750 . G GT 104 PASS INDEL;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7601;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88068803 . GTT G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88068809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.777;LDAF=0.0097;AVGPOST=0.9968;RSQ=0.8635;ERATE=0.0007;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88068852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5471;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88069092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0226;AVGPOST=0.9988;RSQ=0.9796;ERATE=0.0004;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 88069124 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.9054;ERATE=0.0004;THETA=0.0016;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88069255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88069286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88069338 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8580;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88069434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8342;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88069475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7565;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88069537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88069589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0147;AVGPOST=0.9979;RSQ=0.9413;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88069608 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0146;AVGPOST=0.9991;RSQ=0.9770;ERATE=0.0003;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88069736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88069788 . TCTAA T 150 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3779;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88069864 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5375;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88069931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5410;ERATE=0.0005;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88069936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6509;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88069987 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6510;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88070022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0053;AVGPOST=0.9972;RSQ=0.8274;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88070071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9997;RSQ=0.9841;ERATE=0.0004;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88070106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0145;AVGPOST=0.9988;RSQ=0.9677;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88070125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9045;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88070187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0034;AVGPOST=0.9973;RSQ=0.7134;ERATE=0.0010;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88070228 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0147;AVGPOST=0.9988;RSQ=0.9682;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88070357 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7695;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88070483 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6580;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88070573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8825;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88070593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5643;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88070678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88070701 . T TA 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88070769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9743;ERATE=0.0003;THETA=0.0047;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88070804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8758;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88070827 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88070840 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6078;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88070890 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7554;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88070985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88071002 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5773;AVGPOST=0.9910;RSQ=0.9859;ERATE=0.0029;THETA=0.0006;AC=1264;AN=2184 GT:DS:GL:BD 0.57875460 1
1 88071035 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88071168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88071179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0506;AVGPOST=0.9979;RSQ=0.9833;ERATE=0.0003;THETA=0.0006;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 88071212 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8043;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88071245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88071255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88071311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6205;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88071337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88071443 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9800;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88071546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0138;AVGPOST=0.9987;RSQ=0.9608;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 88071551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5051;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88071569 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4559;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88071584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9841;AVGPOST=0.9982;RSQ=0.9556;ERATE=0.0003;THETA=0.0008;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 88071592 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0644;AVGPOST=0.9985;RSQ=0.9896;ERATE=0.0004;THETA=0.0003;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 88071714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88071749 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5761;AVGPOST=0.9964;RSQ=0.9937;ERATE=0.0005;THETA=0.0005;AC=1260;AN=2184 GT:DS:GL:BD 0.57692307 1
1 88071834 . TTTA T 133 PASS INDEL;BAVGPOST=0.990;BRSQ=0.569;LDAF=0.0242;AVGPOST=0.9741;RSQ=0.5650;ERATE=0.0050;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 88071875 . TTA T 71 PASS INDEL;BAVGPOST=0.997;BRSQ=0.562;LDAF=0.0097;AVGPOST=0.9892;RSQ=0.5645;ERATE=0.0019;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88071879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0038;AVGPOST=0.9964;RSQ=0.6063;ERATE=0.0007;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88071930 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6004;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88072038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9256;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88072072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.854;LDAF=0.5130;AVGPOST=0.8871;RSQ=0.8026;ERATE=0.0259;THETA=0.0007;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 88072110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.862;LDAF=0.0459;AVGPOST=0.9849;RSQ=0.8649;ERATE=0.0004;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 88072282 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.906;LDAF=0.5492;AVGPOST=0.9140;RSQ=0.8669;ERATE=0.0109;THETA=0.0004;AC=1219;AN=2184 GT:DS:GL:BD 0.55815017 1
1 88072347 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.891;BRSQ=0.738;LDAF=0.2452;AVGPOST=0.9420;RSQ=0.8914;ERATE=0.0009;THETA=0.0005;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 88072457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.5916;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88072488 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.691;LDAF=0.0118;AVGPOST=0.9890;RSQ=0.6657;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88072507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.732;LDAF=0.9508;AVGPOST=0.9436;RSQ=0.5643;ERATE=0.0047;THETA=0.0008;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 88072719 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.903;LDAF=0.0133;AVGPOST=0.9964;RSQ=0.8910;ERATE=0.0005;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 88072763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0154;AVGPOST=0.9923;RSQ=0.7968;ERATE=0.0007;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 88072880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.541;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.5554;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88072901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7384;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88072958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0102;AVGPOST=0.9968;RSQ=0.8773;ERATE=0.0006;THETA=0.0017;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88072982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.944;LDAF=0.5326;AVGPOST=0.9411;RSQ=0.9122;ERATE=0.0090;THETA=0.0007;AC=1179;AN=2184 GT:DS:GL:BD 0.53983516 1
1 88073015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88073104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4994;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88073156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9984;RSQ=0.9409;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88073159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88073177 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88073193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6075;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88073383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8071;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88073394 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88073427 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88073437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88073448 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88073535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8933;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88073725 . CA C 5026 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0245;AVGPOST=0.9995;RSQ=0.9910;ERATE=0.0003;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 88073809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4813;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88073860 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88073937 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88073955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6350;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88074012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88074032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9888;AVGPOST=0.9995;RSQ=0.9786;ERATE=0.0003;THETA=0.0005;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 88074037 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88074053 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9319;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88074066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0930;AVGPOST=0.9982;RSQ=0.9923;ERATE=0.0004;THETA=0.0007;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 88074222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0112;AVGPOST=0.9992;RSQ=0.9754;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 88074223 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=1.0000;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88074299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0071;AVGPOST=0.9988;RSQ=0.9413;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88074308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88074377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88074442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9713;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88074589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5868;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88074763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7851;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88074985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8024;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0005;THETA=0.0003;AC=1751;AN=2184 GT:DS:GL:BD 0.80173993 1
1 88074987 . TAC T 145 PASS INDEL;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4798;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88075000 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88075005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6380;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88075080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9586;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88075169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6829;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0005;THETA=0.0005;AC=1492;AN=2184 GT:DS:GL:BD 0.68315017 1
1 88075180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0037;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88075237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6269;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88075344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8899;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88075431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88075448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9663;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88075475 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9205;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88075494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8940;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88075583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8155;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88075613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9035;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88075648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88075678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7418;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88075710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0263;AVGPOST=0.9992;RSQ=0.9866;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 88075745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88075768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88075853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8955;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88076029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8418;AVGPOST=0.9968;RSQ=0.9915;ERATE=0.0004;THETA=0.0004;AC=1839;AN=2184 GT:DS:GL:BD 0.84203297 1
1 88076069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88076083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.896;LDAF=0.0416;AVGPOST=0.9950;RSQ=0.9525;ERATE=0.0007;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 88076129 . AAT A 224 PASS INDEL;BAVGPOST=0.984;BRSQ=0.508;LDAF=0.0306;AVGPOST=0.9645;RSQ=0.5265;ERATE=0.0073;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 88076129 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.703;LDAF=0.0319;AVGPOST=0.9713;RSQ=0.6454;ERATE=0.0053;THETA=0.0009;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 88076131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6496;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88076154 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9685;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 88076172 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7853;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88076246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8367;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88076334 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5684;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88076745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88076759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0315;AVGPOST=0.9987;RSQ=0.9839;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 88076849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9595;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88077013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9832;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 88077172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88077188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88077362 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9017;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88077428 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88077495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88077531 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6029;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88077532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.829;LDAF=0.0196;AVGPOST=0.9911;RSQ=0.8343;ERATE=0.0005;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 88077576 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8417;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1838;AN=2184 GT:DS:GL:BD 0.84157509 1
1 88077620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88077627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1420;AVGPOST=0.9970;RSQ=0.9912;ERATE=0.0003;THETA=0.0007;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 88077692 . T TC 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5710;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88077696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0187;AVGPOST=0.9993;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 88077731 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88077782 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.749;LDAF=0.0060;AVGPOST=0.9978;RSQ=0.8716;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88077843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0108;AVGPOST=0.9974;RSQ=0.9129;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 88077844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6367;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88078001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88078059 rs34734940 CT C 37576 PASS INDEL;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3762;AVGPOST=0.9933;RSQ=0.9886;ERATE=0.0005;THETA=0.0003;AC=822;AN=2184 GT:DS:GL:BD 0.37637362 0
1 88078087 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9997;AVGPOST=0.9995;RSQ=0.0677;ERATE=0.0003;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 88078199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7285;ERATE=0.0008;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88078232 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8974;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88078273 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7783;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88078282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9622;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88078533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88078605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5574;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88078721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88078787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2919;AVGPOST=0.9988;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 88078814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7096;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88078969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2403;AVGPOST=0.9956;RSQ=0.9903;ERATE=0.0004;THETA=0.0003;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 88079020 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7189;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88079074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0093;AVGPOST=0.9987;RSQ=0.9414;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88079079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88079217 . T TA 8 PASS INDEL;BAVGPOST=0.993;BRSQ=0.595;LDAF=0.0142;AVGPOST=0.9820;RSQ=0.5130;ERATE=0.0027;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88079284 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1866;AVGPOST=0.9989;RSQ=0.9966;ERATE=0.0005;THETA=0.0002;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 88079292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7216;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88079345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1940;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0005;THETA=0.0002;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 88079377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1187;AVGPOST=0.9981;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 88079381 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0426;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 88079424 . AG A 242 PASS INDEL;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88079542 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88079682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1880;AVGPOST=0.9971;RSQ=0.9934;ERATE=0.0004;THETA=0.0002;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 88079890 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88079972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6039;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88079981 . C CT 70 PASS INDEL;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0036;AVGPOST=0.9951;RSQ=0.4853;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88079983 . A AAT 64 PASS INDEL;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.4671;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88080016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88080036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8447;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88080177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4746;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88080289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3650;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 88080330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8806;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88080442 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7925;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88080469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88080470 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88080471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6301;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88080568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88080755 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2223;AVGPOST=0.9962;RSQ=0.9915;ERATE=0.0004;THETA=0.0003;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 88080762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0464;AVGPOST=0.9985;RSQ=0.9862;ERATE=0.0003;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 88080782 . G GTC 7804 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2275;AVGPOST=0.9941;RSQ=0.9857;ERATE=0.0008;THETA=0.0006;AC=495;AN=2184 GT:DS:GL:BD 0.22664835 0
1 88080786 rs5776907 C CTG 32912 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2294;AVGPOST=0.9980;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 88080790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88080813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6183;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88080905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2908;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 88080943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0110;AVGPOST=0.9965;RSQ=0.8775;ERATE=0.0005;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88081075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9594;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88081125 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 88081171 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8811;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88081323 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9464;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88081350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.750;LDAF=0.0053;AVGPOST=0.9968;RSQ=0.7525;ERATE=0.0009;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88081467 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0484;AVGPOST=0.9989;RSQ=0.9909;ERATE=0.0003;THETA=0.0002;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 88081481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0118;AVGPOST=0.9983;RSQ=0.9474;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 88081760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.2960;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88081795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.956;LDAF=0.2293;AVGPOST=0.9939;RSQ=0.9854;ERATE=0.0011;THETA=0.0005;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 88081809 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4663;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88081956 . C CA 84 PASS INDEL;BAVGPOST=0.993;BRSQ=0.700;LDAF=0.0174;AVGPOST=0.9751;RSQ=0.4292;ERATE=0.0051;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88082055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6789;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88082142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88082187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88082221 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9996;RSQ=0.9774;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88082245 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88082250 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0103;AVGPOST=0.9979;RSQ=0.9256;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88082339 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0125;AVGPOST=0.9971;RSQ=0.9247;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 88082633 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0427;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 88082648 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5729;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88082660 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4711;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88082726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4609;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88082745 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88082748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2278;AVGPOST=0.9971;RSQ=0.9931;ERATE=0.0005;THETA=0.0003;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 88082749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4765;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88082845 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1207;AVGPOST=0.9984;RSQ=0.9931;ERATE=0.0004;THETA=0.0006;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 88082875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7676;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88083021 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6702;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88083037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4467;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88083135 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0057;AVGPOST=0.9954;RSQ=0.6982;ERATE=0.0008;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88083161 . A AT 518 PASS INDEL;BAVGPOST=0.938;BRSQ=0.515;LDAF=0.0871;AVGPOST=0.9554;RSQ=0.8028;ERATE=0.0011;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 88083165 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1214;AVGPOST=0.9963;RSQ=0.9862;ERATE=0.0008;THETA=0.0005;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 88083172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88083326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88083346 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88083417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88083457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5515;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88083488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9429;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88083619 . CA C 1108 PASS INDEL;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0155;AVGPOST=0.9974;RSQ=0.9366;ERATE=0.0004;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 88083645 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1913;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0007;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 88083684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2080;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=452;AN=2184 GT:DS:GL:BD 0.20695971 0
1 88083757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.716;LDAF=0.0087;AVGPOST=0.9956;RSQ=0.8125;ERATE=0.0007;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 88083916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0193;AVGPOST=0.9980;RSQ=0.9508;ERATE=0.0006;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 88084159 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0202;AVGPOST=0.9973;RSQ=0.9365;ERATE=0.0007;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 88084209 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.487;LDAF=0.0285;AVGPOST=0.9664;RSQ=0.5176;ERATE=0.0020;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 88084211 . CT C 285 PASS INDEL;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0103;AVGPOST=0.9957;RSQ=0.8211;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88084232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.371;LDAF=0.0229;AVGPOST=0.9702;RSQ=0.5155;ERATE=0.0019;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 88084258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0317;AVGPOST=0.9973;RSQ=0.9688;ERATE=0.0004;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 88084297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0185;AVGPOST=0.9964;RSQ=0.9316;ERATE=0.0006;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 88084325 . AAAT A 1506 PASS INDEL;BAVGPOST=0.985;BRSQ=0.787;LDAF=0.0384;AVGPOST=0.9899;RSQ=0.8916;ERATE=0.0009;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 88084328 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.589;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5357;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88084364 . C CA 394 PASS INDEL;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0046;AVGPOST=0.9974;RSQ=0.7820;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88084395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6173;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88084490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2662;AVGPOST=0.9955;RSQ=0.9906;ERATE=0.0007;THETA=0.0007;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 88084649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0061;AVGPOST=0.9945;RSQ=0.6563;ERATE=0.0007;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88084663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.557;LDAF=0.0130;AVGPOST=0.9820;RSQ=0.5094;ERATE=0.0009;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88084690 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1128;AVGPOST=0.9975;RSQ=0.9889;ERATE=0.0005;THETA=0.0004;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 88084743 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7007;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88084840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.541;LDAF=0.0038;AVGPOST=0.9963;RSQ=0.5987;ERATE=0.0009;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88084886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0030;AVGPOST=0.9963;RSQ=0.4583;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88084941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.510;LDAF=0.0079;AVGPOST=0.9948;RSQ=0.7468;ERATE=0.0007;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88085018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.535;LDAF=0.0055;AVGPOST=0.9939;RSQ=0.5562;ERATE=0.0007;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88085019 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0193;AVGPOST=0.9980;RSQ=0.9608;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 88085058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.561;LDAF=0.0092;AVGPOST=0.9952;RSQ=0.8029;ERATE=0.0007;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88085108 . GAAC G 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88085261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88085267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0145;AVGPOST=0.9993;RSQ=0.9799;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 88085304 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0421;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 88085374 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8407;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88085377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88085435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88085506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88085578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88085592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88085642 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88085729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0200;AVGPOST=0.9990;RSQ=0.9799;ERATE=0.0004;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 88085892 . T TACCC 356 PASS INDEL;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7925;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88086015 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6933;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88086063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6571;ERATE=0.0009;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88086091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0040;AVGPOST=0.9966;RSQ=0.6768;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88086202 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7861;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88086204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0162;AVGPOST=0.9984;RSQ=0.9608;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 88086327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88086367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1903;AVGPOST=0.9971;RSQ=0.9926;ERATE=0.0005;THETA=0.0008;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 88086415 rs112706578 GAC G 186 PASS INDEL;BAVGPOST=0.985;BRSQ=0.640;LDAF=0.0356;AVGPOST=0.9584;RSQ=0.5360;ERATE=0.0106;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 88086497 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0666;AVGPOST=0.9985;RSQ=0.9895;ERATE=0.0004;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 88086509 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0484;AVGPOST=0.9892;RSQ=0.9085;ERATE=0.0040;THETA=0.0010;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 88086511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9880;ERATE=0.0005;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 88086520 rs77148789 G GT 2100 PASS INDEL;BAVGPOST=0.962;BRSQ=0.614;LDAF=0.0756;AVGPOST=0.9240;RSQ=0.5633;ERATE=0.0237;THETA=0.0007;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 88086520 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5784;ERATE=0.0006;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88086524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8295;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88086644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0182;AVGPOST=0.9986;RSQ=0.9732;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 88086652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4921;AVGPOST=0.9964;RSQ=0.9941;ERATE=0.0007;THETA=0.0004;AC=1075;AN=2184 GT:DS:GL:BD 0.49221611 0
1 88086662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0100;AVGPOST=0.9962;RSQ=0.8722;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88086853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88087133 rs71593466 CACTT C 11842 PASS INDEL;BAVGPOST=0.990;BRSQ=0.945;LDAF=0.1096;AVGPOST=0.9930;RSQ=0.9707;ERATE=0.0012;THETA=0.0007;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 88087249 . ACTTT A 3149 PASS INDEL;BAVGPOST=0.990;BRSQ=0.946;LDAF=0.1072;AVGPOST=0.9939;RSQ=0.9743;ERATE=0.0005;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 88087254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88087301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88087357 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.6573;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88087420 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88087430 . CTCT C 258 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0162;AVGPOST=0.9985;RSQ=0.9647;ERATE=0.0004;THETA=0.0010;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 88087445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0064;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88087447 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88087470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88087505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88087548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1117;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 88087620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7768;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88087667 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88087707 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4860;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88087743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0041;AVGPOST=0.9968;RSQ=0.6832;ERATE=0.0007;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88087749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.712;LDAF=0.0066;AVGPOST=0.9955;RSQ=0.7218;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88087756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9712;ERATE=0.0004;THETA=0.0019;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 88087791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0059;AVGPOST=0.9979;RSQ=0.8416;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88087845 MERGED_DEL_2_4639 C ADELA . . SV;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0004;THETA=0.0003;CIEND=-17;33;CIPOS=-18;19;END=109619242;SOURCE=GenomeStrip_109609466_109619242;SVTYPE=DEL;AC=2;AN GT:DS:GL:BD 0.00091575 0
1 88087845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4745;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88087960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0457;AVGPOST=0.9956;RSQ=0.9579;ERATE=0.0006;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 88088011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88088120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7153;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88088178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5458;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88088279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88088280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0699;AVGPOST=0.9987;RSQ=0.9925;ERATE=0.0004;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 88088364 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0418;AVGPOST=0.9970;RSQ=0.9685;ERATE=0.0004;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 88088449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.740;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.6915;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88088472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6381;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88088568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7069;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88088604 . AAATAAT A 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3450;ERATE=0.0007;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88088613 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88088728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6517;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88088864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9846;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88088882 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88088884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88088980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88089006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88089009 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88089087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0083;AVGPOST=0.9995;RSQ=0.9743;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88089163 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0186;AVGPOST=0.9956;RSQ=0.9082;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 88089166 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0181;AVGPOST=0.9975;RSQ=0.9425;ERATE=0.0005;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 88089169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2859;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0006;THETA=0.0003;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 88089191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8620;ERATE=0.0004;THETA=0.0023;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88089230 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0050;AVGPOST=0.9977;RSQ=0.8005;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88089243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88089249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0267;AVGPOST=0.9980;RSQ=0.9715;ERATE=0.0005;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 88089307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0145;AVGPOST=0.9981;RSQ=0.9513;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88089423 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9820;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88089450 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.873;LDAF=0.0064;AVGPOST=0.9963;RSQ=0.8154;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88089519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88089574 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0057;AVGPOST=0.9991;RSQ=0.9429;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88089738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0581;AVGPOST=0.9968;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 88089816 . AG A 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88089853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7507;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88089921 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9685;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88089995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9992;RSQ=0.9390;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88090010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88090156 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88090162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0148;AVGPOST=0.9994;RSQ=0.9823;ERATE=0.0004;THETA=0.0019;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 88090188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2463;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0005;THETA=0.0005;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 88090290 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1211;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 88090358 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9463;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88090381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8853;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88090490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9744;ERATE=0.0004;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 88090513 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88090544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88090618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9996;RSQ=0.9852;ERATE=0.0004;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 88090694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9593;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88090716 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9991;RSQ=0.9490;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88090718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0004;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88090736 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2500;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 88090745 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1420;AVGPOST=0.9990;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 88090748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88090835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0114;AVGPOST=0.9988;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 88090866 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88090990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8986;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88091044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6967;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88091205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9781;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88091206 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9995;RSQ=0.9832;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 88091208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6164;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88091212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9301;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88091334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88091336 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9602;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88091442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88091559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0107;AVGPOST=0.9965;RSQ=0.8762;ERATE=0.0005;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88091629 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1151;AVGPOST=0.9960;RSQ=0.9858;ERATE=0.0004;THETA=0.0021;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 88091645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0046;AVGPOST=0.9964;RSQ=0.7066;ERATE=0.0009;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88091700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.1533;AVGPOST=0.9893;RSQ=0.9726;ERATE=0.0004;THETA=0.0002;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 88091836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6809;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88091979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2428;AVGPOST=0.9933;RSQ=0.9876;ERATE=0.0007;THETA=0.0029;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 88092028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8687;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88092097 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.509;LDAF=0.0088;AVGPOST=0.9888;RSQ=0.5108;ERATE=0.0041;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88092197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9994;RSQ=0.9680;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88092218 rs56102844 TC T 24041 PASS INDEL;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.2086;AVGPOST=0.9861;RSQ=0.9710;ERATE=0.0005;THETA=0.0013;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 88092545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8649;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88092648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6061;ERATE=0.0004;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88092683 . T TA 780 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8683;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88092769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0053;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88092787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88092807 . CGT C 353 PASS INDEL;BAVGPOST=0.977;BRSQ=0.652;LDAF=0.0405;AVGPOST=0.9614;RSQ=0.5823;ERATE=0.0176;THETA=0.0040;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 88092824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0169;AVGPOST=0.9992;RSQ=0.9793;ERATE=0.0004;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 88092825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7791;ERATE=0.0015;THETA=0.0079;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88092829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9297;ERATE=0.0004;THETA=0.0074;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88092860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88093003 . AT A 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0004;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88093043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0004;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88093052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0236;AVGPOST=0.9979;RSQ=0.9631;ERATE=0.0005;THETA=0.0045;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 88093176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0004;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88093196 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.969;LDAF=0.6074;AVGPOST=0.9784;RSQ=0.9670;ERATE=0.0008;THETA=0.0179;AC=1329;AN=2184 GT:DS:GL:BD 0.60851645 1
1 88093326 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0142;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88093643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9455;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88093650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88093676 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8650;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88093723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2742;AVGPOST=0.9962;RSQ=0.9929;ERATE=0.0008;THETA=0.0002;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 88093798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0297;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 88093998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6796;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88094234 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.5345;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88094348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0103;AVGPOST=0.9994;RSQ=0.9752;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 88094376 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88094389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7280;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88094485 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6181;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88094500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4414;AVGPOST=0.9965;RSQ=0.9940;ERATE=0.0007;THETA=0.0005;AC=966;AN=2184 GT:DS:GL:BD 0.44230768 0
1 88094513 . T TAA 388 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9240;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88094579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88094607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7300;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88094691 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8903;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88094696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8630;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88094730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9280;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88094772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88094825 rs3833539 G GC 201 PASS INDEL;BAVGPOST=0.998;BRSQ=0.843;LDAF=0.0050;AVGPOST=0.9959;RSQ=0.6836;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88094847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0103;AVGPOST=0.9989;RSQ=0.9662;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 88094851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88094854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88094862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88094919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0107;AVGPOST=0.9989;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 88094965 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88095020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9515;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88095057 . TTA T 64 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9352;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88095087 rs113148667 TATA T 1642 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9629;ERATE=0.0004;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88095088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88095217 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88095286 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88095430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88095431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88095443 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88095472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88095527 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88095594 rs112822665 G GC 4744 PASS INDEL;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0277;AVGPOST=0.9977;RSQ=0.9688;ERATE=0.0004;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 88095627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88095643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0105;AVGPOST=0.9991;RSQ=0.9725;ERATE=0.0008;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88095737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88095826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88095894 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88095908 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88095927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88095966 . T TG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88095994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88096088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1438;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0016;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 88096089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9200;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88096267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2832;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0007;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 88096346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0811;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0015;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 88096403 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0289;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 88096506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88096539 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0039;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88096540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88096567 . CTGAT C 433 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9721;ERATE=0.0003;THETA=0.0114;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88096834 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9721;ERATE=0.0003;THETA=0.0074;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88096845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88096861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88097098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7496;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88097128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0077;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0053;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 88097166 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0760;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0017;THETA=0.0092;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 88097191 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7716;ERATE=0.0003;THETA=0.0072;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88097321 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0059;AVGPOST=0.9984;RSQ=0.9087;ERATE=0.0010;THETA=0.0115;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88097363 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88097395 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0004;THETA=0.0108;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88097457 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0004;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88097461 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1253;AVGPOST=0.9951;RSQ=0.9841;ERATE=0.0004;THETA=0.0040;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 88097491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9993;RSQ=0.9445;ERATE=0.0006;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88097506 . AT A 1452 PASS INDEL;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0134;AVGPOST=0.9978;RSQ=0.9279;ERATE=0.0003;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 88097539 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0330;AVGPOST=0.9989;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 88097596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0175;AVGPOST=0.9996;RSQ=0.9897;ERATE=0.0003;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 88097617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88097676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5426;ERATE=0.0006;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88097712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.534;LDAF=0.0135;AVGPOST=0.9836;RSQ=0.5094;ERATE=0.0019;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88097741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.764;LDAF=0.0114;AVGPOST=0.9927;RSQ=0.7454;ERATE=0.0007;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88097746 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.799;LDAF=0.0237;AVGPOST=0.9858;RSQ=0.7850;ERATE=0.0005;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 88097780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.905;LDAF=0.0132;AVGPOST=0.9966;RSQ=0.9002;ERATE=0.0006;THETA=0.0020;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 88097834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.957;LDAF=0.0415;AVGPOST=0.9902;RSQ=0.9226;ERATE=0.0003;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 88097841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.944;LDAF=0.0548;AVGPOST=0.9872;RSQ=0.9195;ERATE=0.0009;THETA=0.0009;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 88097842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.614;LDAF=0.0094;AVGPOST=0.9909;RSQ=0.6455;ERATE=0.0006;THETA=0.0042;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88097846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.950;LDAF=0.3061;AVGPOST=0.9562;RSQ=0.9223;ERATE=0.0013;THETA=0.0006;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 88097899 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0046;AVGPOST=0.9960;RSQ=0.6028;ERATE=0.0009;THETA=0.0046;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88097950 . A AC 49 PASS INDEL;BAVGPOST=0.971;BRSQ=0.520;LDAF=0.0345;AVGPOST=0.9687;RSQ=0.6463;ERATE=0.0023;THETA=0.0044;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 88097980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8439;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88098108 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88098156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88098260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4609;ERATE=0.0005;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88098471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88098487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9744;ERATE=0.0004;THETA=0.0033;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88098552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0214;AVGPOST=0.9990;RSQ=0.9842;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 88098594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.939;LDAF=0.0834;AVGPOST=0.9867;RSQ=0.9352;ERATE=0.0020;THETA=0.0036;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 88098724 rs11441538 G GC 663 PASS INDEL;BAVGPOST=0.997;BRSQ=0.835;LDAF=0.0090;AVGPOST=0.9961;RSQ=0.8258;ERATE=0.0011;THETA=0.0124;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 88098797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0795;AVGPOST=0.9961;RSQ=0.9794;ERATE=0.0005;THETA=0.0154;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 88098813 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5733;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88098883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9716;ERATE=0.0003;THETA=0.0112;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88098921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9575;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88098996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0118;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88099016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.3555;AVGPOST=0.9828;RSQ=0.9741;ERATE=0.0004;THETA=0.0011;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 88099061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.3573;AVGPOST=0.9838;RSQ=0.9752;ERATE=0.0004;THETA=0.0287;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 88099065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7678;ERATE=0.0004;THETA=0.0141;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88099144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1998;AVGPOST=0.9967;RSQ=0.9918;ERATE=0.0005;THETA=0.0023;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 88099352 . G GA 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88099460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.976;LDAF=0.3604;AVGPOST=0.9888;RSQ=0.9832;ERATE=0.0006;THETA=0.0006;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 88099466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88099515 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88099548 . AT A 211 PASS INDEL;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.1433;ERATE=0.0004;THETA=0.0018;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88099571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.945;LDAF=0.0843;AVGPOST=0.9899;RSQ=0.9519;ERATE=0.0003;THETA=0.0013;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 88099703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9885;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88099708 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88099720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2011;AVGPOST=0.9980;RSQ=0.9952;ERATE=0.0013;THETA=0.0010;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 88099729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88099736 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0327;AVGPOST=0.9993;RSQ=0.9905;ERATE=0.0004;THETA=0.0016;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 88099766 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0045;AVGPOST=0.9998;RSQ=0.9835;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88099786 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.885;BRSQ=0.796;LDAF=0.3410;AVGPOST=0.9361;RSQ=0.9125;ERATE=0.0021;THETA=0.0002;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 88099805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2027;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 88099823 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9829;AVGPOST=0.9993;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=2147;AN=2184 GT:DS:GL:BD 0.98305863 1
1 88099830 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0316;AVGPOST=0.9993;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 88099942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5142;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88099987 . TG T 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7265;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88100031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88100050 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88100102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7386;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88100123 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88100289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9601;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88100398 rs71658935 TTAA T 69443 PASS INDEL;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.7733;AVGPOST=0.9822;RSQ=0.9589;ERATE=0.0050;THETA=0.0005;AC=1694;AN=2184 GT:DS:GL:BD 0.77564102 1
1 88100436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2463;AVGPOST=0.9934;RSQ=0.9875;ERATE=0.0004;THETA=0.0024;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 88100618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.1485;AVGPOST=0.9968;RSQ=0.9903;ERATE=0.0003;THETA=0.0006;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 88100619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4604;AVGPOST=0.9968;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 88100630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88100670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0154;AVGPOST=0.9965;RSQ=0.9140;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 88100706 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1697;AVGPOST=0.9977;RSQ=0.9932;ERATE=0.0004;THETA=0.0027;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 88100793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88100838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7805;ERATE=0.0005;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88101146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4862;AVGPOST=0.9949;RSQ=0.9930;ERATE=0.0008;THETA=0.0005;AC=1061;AN=2184 GT:DS:GL:BD 0.48580587 0
1 88101172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.897;LDAF=0.0163;AVGPOST=0.9953;RSQ=0.8886;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 88101180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88101286 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0628;AVGPOST=0.9976;RSQ=0.9842;ERATE=0.0003;THETA=0.0010;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 88101296 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.966;LDAF=0.0627;AVGPOST=0.9975;RSQ=0.9834;ERATE=0.0003;THETA=0.0007;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 88101297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88101412 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3961;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0006;THETA=0.0018;AC=863;AN=2184 GT:DS:GL:BD 0.39514652 0
1 88101455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0079;AVGPOST=0.9985;RSQ=0.9203;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88101462 . GTGCTATGCAGAC G 4175 PASS INDEL;BAVGPOST=0.997;BRSQ=0.884;LDAF=0.0163;AVGPOST=0.9988;RSQ=0.9674;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 88101489 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7435;ERATE=0.0004;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88101558 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9567;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88101642 . CTG C 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7550;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88101676 . TG T 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88101677 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0004;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88101752 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88101773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3965;AVGPOST=0.9968;RSQ=0.9951;ERATE=0.0005;THETA=0.0007;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 88101817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88101952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0194;AVGPOST=0.9972;RSQ=0.9469;ERATE=0.0004;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 88101954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8301;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88101976 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88102001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88102027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8471;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88102414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6906;ERATE=0.0004;THETA=0.0063;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88102416 . A AG 20 PASS INDEL;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88102436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7425;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88102490 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8622;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88102557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88102678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3995;AVGPOST=0.9968;RSQ=0.9957;ERATE=0.0005;THETA=0.0002;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 88102706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88102730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7973;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88102790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0238;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 88102891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88102892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3947;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 88102913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3945;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=860;AN=2184 GT:DS:GL:BD 0.39377290 0
1 88103048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88103107 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0206;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 88103128 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3980;AVGPOST=0.9944;RSQ=0.9909;ERATE=0.0027;THETA=0.0003;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 88103153 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3991;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0007;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 88103210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88103265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88103289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88103316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3989;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 88103362 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3989;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0015;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 88103371 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0274;AVGPOST=0.9991;RSQ=0.9859;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 88103517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88103553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8493;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88103681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88103792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88103853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88103983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9365;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88104071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9888;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88104154 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88104226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88104254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7954;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88104421 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9610;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 88104458 . AG A 1423 PASS INDEL;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0098;AVGPOST=0.9994;RSQ=0.9712;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 88104481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88104498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9252;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88104588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5869;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0005;THETA=0.0007;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 88104621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7404;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88104648 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9785;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88104812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0764;AVGPOST=0.9965;RSQ=0.9827;ERATE=0.0004;THETA=0.0004;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 88104849 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88104894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6368;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88104901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88104966 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8114;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88105002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0235;AVGPOST=0.9996;RSQ=0.9917;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 88105026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9804;ERATE=0.0003;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88105033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0072;AVGPOST=0.9972;RSQ=0.8704;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88105052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9737;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88105126 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.6431;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88105146 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88105154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88105252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0088;AVGPOST=0.9986;RSQ=0.9269;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88105288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1454;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0008;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 88105304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88105320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9809;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88105338 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0234;AVGPOST=0.9974;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 88105390 . TC T 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6044;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88105404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0055;AVGPOST=0.9956;RSQ=0.6587;ERATE=0.0007;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88105477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0057;AVGPOST=0.9992;RSQ=0.9353;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88105492 . C CA 535 PASS INDEL;BAVGPOST=0.750;BRSQ=0.238;LDAF=0.2763;AVGPOST=0.6811;RSQ=0.2995;ERATE=0.0426;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 88105522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.940;LDAF=0.2119;AVGPOST=0.9719;RSQ=0.9394;ERATE=0.0051;THETA=0.0004;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 88105539 . AT A 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6000;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88105573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88105651 . T TCA 403 PASS INDEL;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8639;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88105730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88105835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9440;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88106114 . G GC 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5463;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88106139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0135;AVGPOST=0.9983;RSQ=0.9516;ERATE=0.0003;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 88106230 rs71575185 C CCTCACCA 112756 PASS INDEL;BAVGPOST=0.973;BRSQ=0.957;LDAF=0.4854;AVGPOST=0.9678;RSQ=0.9564;ERATE=0.0112;THETA=0.0004;AC=1068;AN=2184 GT:DS:GL:BD 0.48901099 0
1 88106277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8937;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88106381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7985;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88106417 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7528;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88106438 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9479;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88106445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7492;AVGPOST=0.9862;RSQ=0.9745;ERATE=0.0024;THETA=0.0007;AC=1643;AN=2184 GT:DS:GL:BD 0.75228935 1
1 88106521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88106598 . TAG T 47 PASS INDEL;BAVGPOST=0.992;BRSQ=0.690;LDAF=0.0236;AVGPOST=0.9727;RSQ=0.5273;ERATE=0.0084;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 88106689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4139;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88106721 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8309;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88106743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88106751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4789;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88106758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0213;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 88107188 . TAGAC T 1008 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88107325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8200;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88107456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7016;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88107457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.686;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.6141;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88107529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5471;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88107557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9992;AVGPOST=0.9983;RSQ=0.1459;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 88107581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.4413;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88107600 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6089;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0004;THETA=0.0001;AC=1331;AN=2184 GT:DS:GL:BD 0.60943222 1
1 88107666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88107704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4878;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88107728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.6031;AVGPOST=0.9870;RSQ=0.9812;ERATE=0.0019;THETA=0.0005;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 88107815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.2893;AVGPOST=0.9955;RSQ=0.9925;ERATE=0.0005;THETA=0.0007;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 88107907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88107940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4545;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88108219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7080;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88108255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7610;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88108409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88108410 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0713;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 88108567 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0214;AVGPOST=0.9994;RSQ=0.9894;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 88108698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0125;AVGPOST=0.9987;RSQ=0.9615;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 88108842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0156;AVGPOST=0.9983;RSQ=0.9540;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 88108875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8188;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88109030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9620;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88109060 . A AT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4782;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88109063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0247;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0004;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 88109134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6789;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88109138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0112;AVGPOST=0.9993;RSQ=0.9732;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 88109146 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88109219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0058;AVGPOST=0.9987;RSQ=0.9115;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88109257 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0086;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88109296 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88109350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9192;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88109353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7594;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88109390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.9979;AVGPOST=0.9991;RSQ=0.8055;ERATE=0.0004;THETA=0.0008;AC=2180;AN=2184 GT:DS:GL:BD 0.99816847 1
1 88109541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9778;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 88109634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9917;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 88109707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0136;AVGPOST=0.9982;RSQ=0.9466;ERATE=0.0004;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 88109758 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.3789;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88109863 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9989;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 88109899 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88109962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88110275 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0260;AVGPOST=0.9993;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 88110472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0143;AVGPOST=0.9954;RSQ=0.8710;ERATE=0.0007;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 88110632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0210;AVGPOST=0.9972;RSQ=0.9483;ERATE=0.0003;THETA=0.0012;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 88110720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0142;AVGPOST=0.9980;RSQ=0.9387;ERATE=0.0005;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 88110840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0123;AVGPOST=0.9970;RSQ=0.8906;ERATE=0.0007;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 88111134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7648;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88111332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2169;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0009;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 88111366 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.8987;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88111598 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0094;AVGPOST=0.9973;RSQ=0.8874;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 88111804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0124;AVGPOST=0.9972;RSQ=0.8945;ERATE=0.0006;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 88111815 . TA T 556 PASS INDEL;BAVGPOST=0.991;BRSQ=0.704;LDAF=0.0198;AVGPOST=0.9819;RSQ=0.6285;ERATE=0.0026;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 88111885 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8616;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88111904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.593;LDAF=0.0034;AVGPOST=0.9965;RSQ=0.6180;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88111930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2599;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0005;THETA=0.0008;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 88112125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7996;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88112159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2629;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0006;THETA=0.0006;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 88112212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88112378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7683;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88112404 . ATCT A 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7512;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88112411 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0272;AVGPOST=0.9973;RSQ=0.9654;ERATE=0.0004;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 88112490 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5933;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88112528 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88112585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88112612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88112697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0173;AVGPOST=0.9981;RSQ=0.9682;ERATE=0.0003;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 88112779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88112809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9707;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88112832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5526;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88112980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7458;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88113276 rs79485630 TGA T 17 PASS INDEL;BAVGPOST=0.960;BRSQ=0.084;LDAF=0.0821;AVGPOST=0.9041;RSQ=0.5169;ERATE=0.0015;THETA=0.0003;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 88113375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0191;AVGPOST=0.9982;RSQ=0.9597;ERATE=0.0005;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 88113380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9943;RSQ=0.8990;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 88113381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0037;AVGPOST=0.9937;RSQ=0.3421;ERATE=0.0012;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88113580 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0279;AVGPOST=0.9961;RSQ=0.9479;ERATE=0.0006;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 88113581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0033;AVGPOST=0.9948;RSQ=0.3633;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88113639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 88113793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88113816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6382;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88114135 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88114303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88114341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2098;AVGPOST=0.9978;RSQ=0.9948;ERATE=0.0004;THETA=0.0002;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 88114359 . TTA T 257 PASS INDEL;BAVGPOST=0.980;BRSQ=0.550;LDAF=0.0433;AVGPOST=0.9484;RSQ=0.4974;ERATE=0.0120;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 88114393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.972;LDAF=0.3347;AVGPOST=0.9937;RSQ=0.9879;ERATE=0.0011;THETA=0.0001;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 88114646 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0043;AVGPOST=0.9950;RSQ=0.5478;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88114718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.8176;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88114763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4540;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88114836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5785;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88114931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88114933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0228;AVGPOST=0.9990;RSQ=0.9820;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 88115145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88115259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.491;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6210;ERATE=0.0007;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88115355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9538;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88115377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88115454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8570;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88115538 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88115539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7396;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88115655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88115740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88115750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9474;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88115770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9987;RSQ=0.3210;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 88115814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88115869 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88115882 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88115916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9774;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88115949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8008;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88116088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0192;AVGPOST=0.9995;RSQ=0.9885;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 88116108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9787;ERATE=0.0003;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88116198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6873;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88116274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4059;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 88116355 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9387;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88116356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88116424 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4703;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88116463 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9702;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88116467 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88116541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5895;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88116586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8411;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88116644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8231;ERATE=0.0010;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88116673 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 88116715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9980;RSQ=0.7698;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88116720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.4793;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88116721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 88116746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7926;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88116836 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88116863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8718;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88116896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6088;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88116967 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88117013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88117028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5002;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88117161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1980;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 88117260 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9180;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88117273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2327;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 88117303 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88117333 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88117362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88117402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1869;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0001;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 88117414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2321;AVGPOST=0.9979;RSQ=0.9955;ERATE=0.0010;THETA=0.0001;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 88117424 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8379;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88117428 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9904;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88117517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2003;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 88117524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88117543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88117561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9362;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88117567 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0095;AVGPOST=0.9983;RSQ=0.9416;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 88117678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7385;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88117714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7681;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88117738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9396;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88117783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.8785;AVGPOST=0.9979;RSQ=0.9917;ERATE=0.0004;THETA=0.0001;AC=1919;AN=2184 GT:DS:GL:BD 0.87866300 1
1 88117864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88117902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9088;ERATE=0.0004;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88117958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1264;AVGPOST=0.9988;RSQ=0.9946;ERATE=0.0004;THETA=0.0002;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 88117970 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3913;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88117991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88117993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4719;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88118027 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9429;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88118050 . CAA C 421 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88118255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7863;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88118271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88118272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88118344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88118452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88118473 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7526;AVGPOST=0.9974;RSQ=0.9941;ERATE=0.0008;THETA=0.0001;AC=1645;AN=2184 GT:DS:GL:BD 0.75320512 1
1 88118491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88118511 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9189;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88118567 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8749;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88118618 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0146;AVGPOST=0.9963;RSQ=0.9157;ERATE=0.0003;THETA=0.0001;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 88118650 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88118668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4569;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88118686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0023;AVGPOST=0.9978;RSQ=0.6039;ERATE=0.0005;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88118726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.955;LDAF=0.0418;AVGPOST=0.9921;RSQ=0.9262;ERATE=0.0003;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 88118765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7936;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88118809 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9293;ERATE=0.0003;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88119001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8648;ERATE=0.0003;THETA=0.0056;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88119009 . G GT 235 PASS INDEL;BAVGPOST=0.991;BRSQ=0.593;LDAF=0.0189;AVGPOST=0.9796;RSQ=0.5816;ERATE=0.0046;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 88119025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9232;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88119047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1015;AVGPOST=0.9991;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 88119143 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9128;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88119165 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88119304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6753;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88119347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8033;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88119369 . T TTCCTAATG 186 PASS INDEL;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4467;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88119377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8338;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88119380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88119484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88119534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9108;ERATE=0.0003;THETA=0.0025;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88119828 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6658;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88119954 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2783;AVGPOST=0.9964;RSQ=0.9937;ERATE=0.0005;THETA=0.0005;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 88119976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9354;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88120016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0596;AVGPOST=0.9979;RSQ=0.9875;ERATE=0.0005;THETA=0.0009;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 88120140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7280;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88120369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0052;AVGPOST=0.9991;RSQ=0.9303;ERATE=0.0004;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88120435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7865;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88120457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8864;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88120592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88120778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9402;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88120821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0284;AVGPOST=0.9979;RSQ=0.9707;ERATE=0.0004;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 88120825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6629;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88120852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88120964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1390;AVGPOST=0.9955;RSQ=0.9849;ERATE=0.0007;THETA=0.0006;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 88121042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8250;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88121071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.6825;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88121141 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7074;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88121199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88121211 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88121225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88121324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88121351 . A AT 28 PASS INDEL;BAVGPOST=0.995;BRSQ=0.453;LDAF=0.0068;AVGPOST=0.9917;RSQ=0.5360;ERATE=0.0015;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 88121444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88121621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9287;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88121641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6959;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88121661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7381;ERATE=0.0010;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88121694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8764;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88121701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0012;AVGPOST=0.9982;RSQ=0.3215;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88121721 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9357;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88121842 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88121852 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 88121973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.836;LDAF=0.0157;AVGPOST=0.9944;RSQ=0.8567;ERATE=0.0004;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88122076 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88122104 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88122143 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88122149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88122229 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0063;AVGPOST=0.9984;RSQ=0.9206;ERATE=0.0006;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88122303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9996;RSQ=0.9883;ERATE=0.0003;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 88122315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3706;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 88122398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88122399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88122440 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88122509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3732;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 88122656 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88122658 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5522;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88122726 . AAGAC A 212 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5354;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88122728 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9781;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 88123067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9994;RSQ=0.9557;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88123108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88123227 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88123372 . TA T 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6991;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88123420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0264;AVGPOST=0.9989;RSQ=0.9854;ERATE=0.0003;THETA=0.0015;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 88123421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88123439 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8785;ERATE=0.0004;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 88123512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9138;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88123521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88123544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0621;AVGPOST=0.9984;RSQ=0.9913;ERATE=0.0003;THETA=0.0006;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 88123574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88123614 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88123619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.722;LDAF=0.0049;AVGPOST=0.9968;RSQ=0.7053;ERATE=0.0006;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 88123816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88123989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0200;AVGPOST=0.9974;RSQ=0.9557;ERATE=0.0003;THETA=0.0072;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 88124239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9502;ERATE=0.0003;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 88124341 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0089;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88124342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8558;ERATE=0.0003;THETA=0.0059;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88124349 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9702;ERATE=0.0003;THETA=0.0032;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 88124473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6253;ERATE=0.0004;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88124740 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7796;ERATE=0.0003;THETA=0.0053;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88124942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9780;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88125125 . TTC T 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.5850;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88125143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8568;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88125158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8328;ERATE=0.0004;THETA=0.0097;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88125254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9705;ERATE=0.0003;THETA=0.0037;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 88125397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0152;AVGPOST=0.9986;RSQ=0.9652;ERATE=0.0003;THETA=0.0032;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 88125602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.876;LDAF=0.6587;AVGPOST=0.9351;RSQ=0.8958;ERATE=0.0096;THETA=0.0037;AC=1451;AN=2184 GT:DS:GL:BD 0.66437727 1
1 88125638 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7282;ERATE=0.0006;THETA=0.0120;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 88125685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9342;ERATE=0.0003;THETA=0.0076;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88125699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0018;AVGPOST=0.9985;RSQ=0.6552;ERATE=0.0004;THETA=0.0049;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88125755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8793;ERATE=0.0010;THETA=0.0025;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 88125877 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0244;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88125912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0003;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88125917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8534;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88126114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88126212 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5861;ERATE=0.0003;THETA=0.0090;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88126385 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7386;ERATE=0.0004;THETA=0.0078;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88126387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8626;ERATE=0.0004;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 88126470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88126527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8681;ERATE=0.0003;THETA=0.0271;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88126561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9793;ERATE=0.0003;THETA=0.0034;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 88126563 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9041;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 88126578 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7042;ERATE=0.0003;THETA=0.0076;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 88126946 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6186;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88127011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.695;LDAF=0.0047;AVGPOST=0.9976;RSQ=0.7853;ERATE=0.0003;THETA=0.0080;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 88127027 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7748;ERATE=0.0004;THETA=0.0160;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88127078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.787;LDAF=0.0209;AVGPOST=0.9915;RSQ=0.8324;ERATE=0.0012;THETA=0.0063;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 88127169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88127273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88127367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6006;ERATE=0.0003;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 88127591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0051;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 88127751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9232;ERATE=0.0003;THETA=0.0035;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 88127790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0101;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0