| estimateMode | Estimation of the modes of the rows of a matrix |
| extractBic | Extraction of Biclusters |
| extractPlot | Plotting of Biclustering Results |
| fabi | Factor Analysis for Bicluster Acquisition: Laplace Prior (FABI) |
| fabia | Factor Analysis for Bicluster Acquisition: Laplace Prior (FABIA) |
| fabiaDemo | Demos for fabia |
| fabiap | Factor Analysis for Bicluster Acquisition: Post-Projection (FABIAP) |
| fabias | Factor Analysis for Bicluster Acquisition: Sparseness Projection (FABIAS) |
| fabiasp | Factor Analysis for Bicluster Acquisition: Sparseness Projection (FABIASP) |
| fabiaVersion | Display version info for package and for FABIA |
| Factorization | The Factorization Class |
| Factorization-class | The Factorization Class |
| makeFabiaData | Generation of Bicluster Data |
| makeFabiaDataBlocks | Generation of Bicluster Data with Bicluster Blocks |
| makeFabiaDataBlocksPos | Generation of Bicluster Data with Bicluster Blocks |
| makeFabiaDataPos | Generation of Bicluster Data |
| matrixImagePlot | Plotting of a Matrix |
| mfsc | Sparse Matrix Factorization for Bicluster Analysis (MFSC) |
| nmfdiv | Non-negative Matrix Factorization: Kullback-Leibler Divergence |
| nmfeu | Non-negative Matrix Factorization: Euclidean Distance |
| nmfsc | Non-negative Sparse Matrix Factorization |
| plot | Plot of a Matrix Factorization |
| plot-method | Plot of a Matrix Factorization |
| plot-methods | Plot of a Matrix Factorization |
| plotBicluster | Plotting of a bicluster |
| projFunc | Projection of a Vector to a Sparse Vector |
| projFuncPos | Projection of a Vector to a Non-negative Sparse Vector |
| readSamplesSpfabia | Factor Analysis for Bicluster Acquisition: Read Sparse Matrix Samples |
| readSpfabiaResult | Factor Analysis for Bicluster Acquisition: Read Results of SpFabia |
| samplesPerFeature | Factor Analysis for Bicluster Acquisition: Supplies samples per feature |
| show | Plot Statistics of a Matrix Factorization |
| show-method | Plot Statistics of a Matrix Factorization |
| show-methods | Plot Statistics of a Matrix Factorization |
| showSelected | Plot Selected Statistics of a Matrix Factorization |
| showSelected-method | Plot Selected Statistics of a Matrix Factorization |
| showSelected-methods | Plot Selected Statistics of a Matrix Factorization |
| spfabia | Factor Analysis for Bicluster Acquisition: SPARSE FABIA |
| summary | Summary of Matrix Factorization |
| summary-method | Summary of Matrix Factorization |
| summary-methods | Summary of Matrix Factorization |