1092
10000
1 78810055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78810122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0128;AVGPOST=0.9982;RSQ=0.9486;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78810252 rs71912743 CATG C 1001 PASS INDEL;BAVGPOST=0.996;BRSQ=0.765;LDAF=0.0100;AVGPOST=0.9946;RSQ=0.7991;ERATE=0.0006;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78810289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0010;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78810344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5903;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0005;THETA=0.0016;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 78810450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5902;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 78810502 . TGTTGAAGTTAC T 2216 PASS INDEL;BAVGPOST=0.997;BRSQ=0.750;LDAF=0.0076;AVGPOST=0.9941;RSQ=0.7306;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78810594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0418;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 78810736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7197;ERATE=0.0004;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78810810 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78810907 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0054;AVGPOST=0.9980;RSQ=0.8428;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78810930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78810958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5907;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 78811034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0196;AVGPOST=0.9994;RSQ=0.9873;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78811040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9995;RSQ=0.9797;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78811092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8858;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78811194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78811224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78811237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9372;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78811270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78811271 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8359;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78811304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0431;AVGPOST=0.9979;RSQ=0.9787;ERATE=0.0003;THETA=0.0006;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 78811328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.893;LDAF=0.0785;AVGPOST=0.9926;RSQ=0.9622;ERATE=0.0004;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 78811377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78811401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5907;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0006;THETA=0.0005;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 78811508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7610;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78811701 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9366;ERATE=0.0003;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78811746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6857;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78811857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8069;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78811908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0038;AVGPOST=0.9962;RSQ=0.6355;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78812079 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8052;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78812117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0036;AVGPOST=0.9966;RSQ=0.6468;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78812187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5952;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78812302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78812506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0035;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78812597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9776;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78812644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9784;AVGPOST=0.9996;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 78812657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78812713 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9334;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78812807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78812851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78812866 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7698;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78812882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0161;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78813075 . A ATGC 1121 PASS INDEL;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0088;AVGPOST=0.9992;RSQ=0.9560;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78813170 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0044;AVGPOST=0.9988;RSQ=0.8835;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78813220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.7148;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78813282 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7610;ERATE=0.0005;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78813396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78813482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7303;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78813647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3589;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0005;THETA=0.0010;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 78813742 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4598;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78813828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0040;AVGPOST=0.9963;RSQ=0.6592;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78813829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0233;AVGPOST=0.9973;RSQ=0.9513;ERATE=0.0006;THETA=0.0005;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78813845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.710;LDAF=0.0057;AVGPOST=0.9973;RSQ=0.8003;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78813905 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6541;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78813955 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9532;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78814111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3590;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0005;THETA=0.0008;AC=785;AN=2184 GT:DS:GL:BD 0.35943222 0
1 78814145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6598;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78814267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0084;AVGPOST=0.9984;RSQ=0.9320;ERATE=0.0006;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78814361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0191;AVGPOST=0.9982;RSQ=0.9637;ERATE=0.0003;THETA=0.0003;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78814449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0004;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78814475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0123;AVGPOST=0.9981;RSQ=0.9335;ERATE=0.0004;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78814498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9151;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78814638 . C CT 59 PASS INDEL;BAVGPOST=0.989;BRSQ=0.542;LDAF=0.0196;AVGPOST=0.9741;RSQ=0.4673;ERATE=0.0067;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78814703 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78814763 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9989;RSQ=0.9471;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78814945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0205;AVGPOST=0.9988;RSQ=0.9744;ERATE=0.0004;THETA=0.0008;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78814955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0310;AVGPOST=0.9992;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78814959 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78814989 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.7617;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78815070 rs56044500 TC T 4652 PASS INDEL;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0445;AVGPOST=0.9996;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 78815105 rs56131945 CG C 4357 PASS INDEL;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0446;AVGPOST=0.9993;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 78815108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0287;AVGPOST=0.9992;RSQ=0.9878;ERATE=0.0003;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78815174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0164;AVGPOST=0.9986;RSQ=0.9677;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78815177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9241;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78815532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8772;ERATE=0.0005;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78815600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2457;AVGPOST=0.9970;RSQ=0.9944;ERATE=0.0004;THETA=0.0005;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 78815730 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0221;AVGPOST=0.9968;RSQ=0.9410;ERATE=0.0006;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78815822 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2477;AVGPOST=0.9978;RSQ=0.9954;ERATE=0.0004;THETA=0.0006;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 78815835 . AG A 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78815870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78815979 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3436;AVGPOST=0.9959;RSQ=0.9926;ERATE=0.0013;THETA=0.0010;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 78815980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8439;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78816100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78816119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78816179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8926;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78816248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6756;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78816385 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.3409;AVGPOST=0.9919;RSQ=0.9865;ERATE=0.0005;THETA=0.0007;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 78816451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.6280;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78816541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6960;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78816575 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9045;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78816909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0282;AVGPOST=0.9942;RSQ=0.9172;ERATE=0.0005;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78816945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78817066 rs61328800 AC A 3062 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0198;AVGPOST=0.9988;RSQ=0.9767;ERATE=0.0003;THETA=0.0010;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78817289 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9440;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78817335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78817351 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8162;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78817358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8385;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78817402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78817454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0441;AVGPOST=0.9983;RSQ=0.9843;ERATE=0.0004;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 78817563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7595;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78817635 . AG A 318 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.7782;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78817637 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78817662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78817708 . TC T 505 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.8984;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78817726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4675;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78818004 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0156;AVGPOST=0.9999;RSQ=0.9959;ERATE=0.0003;THETA=0.0024;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78818062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0050;AVGPOST=0.9977;RSQ=0.8278;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78818073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7202;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78818076 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9364;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78818302 . TGC T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78818333 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6906;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78818345 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0124;AVGPOST=0.9979;RSQ=0.9367;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78818393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78818414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78818415 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78818559 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.951;LDAF=0.7672;AVGPOST=0.9827;RSQ=0.9626;ERATE=0.0006;THETA=0.0009;AC=1691;AN=2184 GT:DS:GL:BD 0.77426738 1
1 78818609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.862;LDAF=0.7160;AVGPOST=0.9166;RSQ=0.8427;ERATE=0.0206;THETA=0.0013;AC=1607;AN=2184 GT:DS:GL:BD 0.73580587 1
1 78818642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9589;ERATE=0.0004;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78818655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4081;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78818702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6834;ERATE=0.0006;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78818726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0639;AVGPOST=0.9991;RSQ=0.9950;ERATE=0.0003;THETA=0.0012;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 78818834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78818908 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78819031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8806;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78819034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0023;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 78819035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78819069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8377;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78819091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.9039;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78819135 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0003;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78819155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78819213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.861;LDAF=0.0067;AVGPOST=0.9987;RSQ=0.9169;ERATE=0.0003;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78819214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78819354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7747;AVGPOST=0.9977;RSQ=0.9945;ERATE=0.0004;THETA=0.0008;AC=1694;AN=2184 GT:DS:GL:BD 0.77564102 1
1 78819479 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6726;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78819515 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78819520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6960;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78819566 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8111;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78819707 . ATTC A 128 PASS INDEL;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5459;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78819764 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78819871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78819912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6866;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78819931 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7088;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0004;THETA=0.0006;AC=1549;AN=2184 GT:DS:GL:BD 0.70924908 1
1 78819971 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78820052 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78820088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6987;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=1527;AN=2184 GT:DS:GL:BD 0.69917583 1
1 78820122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78820136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78820138 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78820144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7088;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0006;AC=1549;AN=2184 GT:DS:GL:BD 0.70924908 1
1 78820251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7748;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0009;AC=1694;AN=2184 GT:DS:GL:BD 0.77564102 1
1 78820505 . CAT C 462 PASS INDEL;BAVGPOST=0.995;BRSQ=0.854;LDAF=0.0202;AVGPOST=0.9934;RSQ=0.8782;ERATE=0.0007;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78820691 . A AAT 2291 PASS INDEL;BAVGPOST=0.978;BRSQ=0.852;LDAF=0.0688;AVGPOST=0.9778;RSQ=0.8833;ERATE=0.0020;THETA=0.0009;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 78820695 . T TTTTA 26015 PASS INDEL;BAVGPOST=0.876;BRSQ=0.743;LDAF=0.6408;AVGPOST=0.8183;RSQ=0.6774;ERATE=0.0596;THETA=0.0017;AC=1494;AN=2184 GT:DS:GL:BD 0.68406594 1
1 78820753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0141;AVGPOST=0.9986;RSQ=0.9647;ERATE=0.0003;THETA=0.0013;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78820780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78820901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8168;ERATE=0.0005;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78820930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821094 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821101 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78821212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821273 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821377 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8509;ERATE=0.0004;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78821382 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6970;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=1524;AN=2184 GT:DS:GL:BD 0.69780219 1
1 78821402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821501 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0087;AVGPOST=0.9981;RSQ=0.9041;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78821516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0363;AVGPOST=0.9978;RSQ=0.9792;ERATE=0.0004;THETA=0.0010;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 78821567 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5990;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78821588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821686 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8232;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78821737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5134;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821774 . CG C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4900;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9912;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78821849 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78821903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.2722;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78821955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78821969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0079;AVGPOST=0.9984;RSQ=0.9174;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78822024 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6884;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0014;AC=1504;AN=2184 GT:DS:GL:BD 0.68864471 1
1 78822157 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8964;ERATE=0.0003;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78822264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6883;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78822271 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6714;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78822510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78822547 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7031;AVGPOST=0.9972;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=1534;AN=2184 GT:DS:GL:BD 0.70238096 1
1 78822556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78822578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78822681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78822704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7769;AVGPOST=0.9973;RSQ=0.9946;ERATE=0.0004;THETA=0.0008;AC=1697;AN=2184 GT:DS:GL:BD 0.77701467 1
1 78822727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5467;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78822799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9732;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78822925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0055;AVGPOST=0.9982;RSQ=0.8824;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78822926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78823000 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5653;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78823024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78823050 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4329;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78823053 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78823125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9033;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78823134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0010;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78823143 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0371;AVGPOST=0.9987;RSQ=0.9882;ERATE=0.0004;THETA=0.0008;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 78823244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7592;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78823281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7981;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78823292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78823441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.843;LDAF=0.0248;AVGPOST=0.9952;RSQ=0.9171;ERATE=0.0005;THETA=0.0009;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78823449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8033;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78823476 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5121;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78823488 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4365;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 78823695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78823751 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4386;AVGPOST=0.9962;RSQ=0.9952;ERATE=0.0006;THETA=0.0004;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 78823777 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.4394;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 78823836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0061;AVGPOST=0.9963;RSQ=0.7811;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78823843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=1.000;LDAF=0.4769;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=1043;AN=2184 GT:DS:GL:BD 0.47756410 0
1 78823851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8687;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78823856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5514;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78823896 . T TTTTG 1664 PASS INDEL;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9508;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78823899 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5722;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78823937 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.4286;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78823958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0035;AVGPOST=0.9971;RSQ=0.6939;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78823985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78823992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0089;AVGPOST=0.9941;RSQ=0.7570;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78824022 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0202;AVGPOST=0.9989;RSQ=0.9749;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78824041 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7198;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78824108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0040;AVGPOST=0.9959;RSQ=0.6113;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78824164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78824186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78824244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0039;AVGPOST=0.9949;RSQ=0.5680;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78824442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8739;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78824482 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78824559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0091;AVGPOST=0.9987;RSQ=0.9387;ERATE=0.0005;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78824756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78824798 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9166;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78824961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78825006 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78825013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4924;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78825079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.919;LDAF=0.0210;AVGPOST=0.9969;RSQ=0.9470;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78825286 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4688;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78825418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0082;AVGPOST=0.9966;RSQ=0.8505;ERATE=0.0004;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78825660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78825768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4393;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=961;AN=2184 GT:DS:GL:BD 0.44001833 0
1 78825786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3124;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78825800 . TTTC T 118 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7342;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78826032 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8640;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78826081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8566;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78826232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.475;LDAF=0.9952;AVGPOST=0.9931;RSQ=0.4098;ERATE=0.0008;THETA=0.0004;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 78826339 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0065;AVGPOST=0.9965;RSQ=0.8045;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78826350 . GTT G 3220 PASS INDEL;BAVGPOST=0.947;BRSQ=0.790;LDAF=0.1413;AVGPOST=0.9471;RSQ=0.8456;ERATE=0.0050;THETA=0.0003;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 78827272 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.528;LDAF=0.0061;AVGPOST=0.9942;RSQ=0.6377;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78827331 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.738;LDAF=0.0066;AVGPOST=0.9963;RSQ=0.7704;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78827448 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8443;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78827493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1875;AVGPOST=0.9953;RSQ=0.9879;ERATE=0.0004;THETA=0.0004;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 78827501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7121;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78827729 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0133;AVGPOST=0.9966;RSQ=0.9076;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78827938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78828088 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3921;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78828213 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0065;AVGPOST=0.9967;RSQ=0.7922;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78828227 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5306;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78828275 . A AT 1664 PASS INDEL;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0120;AVGPOST=0.9993;RSQ=0.9711;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78828315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78828380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8504;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78828455 . C CA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78828558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78828627 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78828721 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4458;AVGPOST=0.9936;RSQ=0.9902;ERATE=0.0004;THETA=0.0097;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 78828965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5326;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78829015 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78829121 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0056;AVGPOST=0.9985;RSQ=0.8919;ERATE=0.0003;THETA=0.0024;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78829239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0142;AVGPOST=0.9963;RSQ=0.8975;ERATE=0.0003;THETA=0.0045;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78829271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0620;AVGPOST=0.9988;RSQ=0.9924;ERATE=0.0004;THETA=0.0017;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 78829319 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7019;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78829332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7477;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78829445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0002;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78829485 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78829642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8884;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78829700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8342;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78829714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8618;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78829729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4651;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 78829832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5113;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78829928 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0177;AVGPOST=0.9987;RSQ=0.9781;ERATE=0.0002;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78829945 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9904;ERATE=0.0004;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78830005 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8343;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78830066 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0443;AVGPOST=0.9989;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 78830175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8288;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78830189 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7293;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78830320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0123;AVGPOST=0.9992;RSQ=0.9761;ERATE=0.0002;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78830370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7039;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78830562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0102;AVGPOST=0.9989;RSQ=0.9576;ERATE=0.0002;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78830642 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0069;AVGPOST=0.9986;RSQ=0.9226;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78830683 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7730;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78830710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78830740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0047;AVGPOST=0.9992;RSQ=0.9293;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78830741 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4734;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78830744 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78830839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0002;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78830887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78831044 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0014;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78831198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=0.9992;RSQ=0.9646;ERATE=0.0002;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78831330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.943;LDAF=0.9558;AVGPOST=0.9942;RSQ=0.9465;ERATE=0.0003;THETA=0.0014;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 78831332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0137;AVGPOST=0.9994;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78831485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9223;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78831603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9486;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78831691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78831721 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8843;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78831780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0075;AVGPOST=0.9973;RSQ=0.8619;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78831816 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.806;LDAF=0.0793;AVGPOST=0.9671;RSQ=0.8379;ERATE=0.0008;THETA=0.0004;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 78831834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0109;AVGPOST=0.9967;RSQ=0.8918;ERATE=0.0006;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78831836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.4899;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78831857 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8019;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78832084 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7335;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78832164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0163;AVGPOST=0.9984;RSQ=0.9648;ERATE=0.0004;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78832353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9596;ERATE=0.0002;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78832365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9371;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78832451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78832599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6474;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78832708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78832774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4563;AVGPOST=0.9967;RSQ=0.9945;ERATE=0.0006;THETA=0.0004;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 78832813 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0036;AVGPOST=0.9965;RSQ=0.6111;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78832855 . AG A 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5164;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78832861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8670;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78832901 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9907;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78832924 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0446;AVGPOST=0.9982;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 78832943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.6054;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78833020 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8958;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78833196 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5393;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78833214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.5268;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=1151;AN=2184 GT:DS:GL:BD 0.52701467 1
1 78833327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0173;AVGPOST=0.9969;RSQ=0.9249;ERATE=0.0004;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78833485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4625;AVGPOST=0.9970;RSQ=0.9952;ERATE=0.0005;THETA=0.0006;AC=1009;AN=2184 GT:DS:GL:BD 0.46199635 0
1 78833697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7754;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78833849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.0117;AVGPOST=0.9971;RSQ=0.9021;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78833868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78833930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5490;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78834016 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9470;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78834098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78834298 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9980;RSQ=0.9210;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78834370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5960;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78834394 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5579;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78834537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.841;LDAF=0.0090;AVGPOST=0.9974;RSQ=0.8753;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78834752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9501;AVGPOST=0.9991;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=2075;AN=2184 GT:DS:GL:BD 0.95009160 1
1 78835071 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.9195;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78835075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78835099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8129;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78835193 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0039;AVGPOST=0.9965;RSQ=0.6550;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78835262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7461;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78835280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9177;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78835365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78835477 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9751;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78835541 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7676;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78835560 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9577;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78835578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78835594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78835597 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2473;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 78835673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8967;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78835679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78835822 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7422;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78835903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0063;AVGPOST=0.9981;RSQ=0.8741;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78835950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3139;AVGPOST=0.9973;RSQ=0.9947;ERATE=0.0006;THETA=0.0003;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 78836015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.8023;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78836051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.8036;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78836065 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0160;AVGPOST=0.9989;RSQ=0.9744;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78836205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5069;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78836364 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78836465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0176;AVGPOST=0.9973;RSQ=0.9324;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78836596 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7815;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78836644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0034;AVGPOST=0.9953;RSQ=0.4851;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78836810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9984;RSQ=0.9456;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78836833 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0800;AVGPOST=0.9949;RSQ=0.9730;ERATE=0.0004;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 78836873 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7206;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78837098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5504;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0006;THETA=0.0007;AC=1202;AN=2184 GT:DS:GL:BD 0.55036628 1
1 78837171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4167;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78837180 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0553;AVGPOST=0.9981;RSQ=0.9884;ERATE=0.0004;THETA=0.0002;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 78837229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78837278 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78837439 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8733;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78837475 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7901;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78837512 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6334;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78837651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8680;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0008;AC=1895;AN=2184 GT:DS:GL:BD 0.86767399 1
1 78837683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2481;AVGPOST=0.9974;RSQ=0.9944;ERATE=0.0005;THETA=0.0007;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 78837702 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78837703 . AT A 46 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78837751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78837800 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78837865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8752;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78837938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6726;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78838310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0150;AVGPOST=0.9997;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78838328 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9814;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78838335 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78838512 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78838513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5372;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78838554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78838632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78838659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5754;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78838733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5459;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78838808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0112;AVGPOST=0.9899;RSQ=0.6504;ERATE=0.0008;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78838810 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0249;AVGPOST=0.9985;RSQ=0.9727;ERATE=0.0006;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78838884 . C CT 329 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9642;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78839035 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8935;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78839038 . TC T 366 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8441;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78839057 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9517;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78839200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78839258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5063;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78839543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9589;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78839593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5817;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78839616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78839920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5341;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78839970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1411;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 78840007 . CAG C 10514 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0699;AVGPOST=0.9989;RSQ=0.9935;ERATE=0.0004;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 78840057 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.960;LDAF=0.0624;AVGPOST=0.9989;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 78840256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0124;AVGPOST=0.9986;RSQ=0.9513;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78840447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.8057;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78840499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.674;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9013;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78840633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0701;AVGPOST=0.9983;RSQ=0.9902;ERATE=0.0006;THETA=0.0009;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 78840706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4841;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78840737 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5033;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78840882 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0577;AVGPOST=0.9990;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 78840890 rs11317445 CT C 23413 PASS INDEL;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2485;AVGPOST=0.9926;RSQ=0.9860;ERATE=0.0006;THETA=0.0005;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 78841043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5471;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78841074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.937;LDAF=0.4180;AVGPOST=0.9678;RSQ=0.9528;ERATE=0.0032;THETA=0.0004;AC=928;AN=2184 GT:DS:GL:BD 0.42490843 0
1 78841234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.688;LDAF=0.0083;AVGPOST=0.9908;RSQ=0.5930;ERATE=0.0009;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78841259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9785;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78841289 . A AAAT 21 PASS INDEL;BAVGPOST=0.996;BRSQ=0.650;LDAF=0.0079;AVGPOST=0.9968;RSQ=0.8147;ERATE=0.0009;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78841326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0315;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78841572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4365;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0007;THETA=0.0003;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 78841712 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78841754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78841993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2495;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 78842028 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78842135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0083;AVGPOST=0.9993;RSQ=0.9597;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78842355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0685;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0003;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 78842356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6661;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78842359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78842363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9998;RSQ=0.8876;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78842525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6082;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=1330;AN=2184 GT:DS:GL:BD 0.60897434 1
1 78842566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78842662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78842678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8584;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78842708 rs5781240 T TTAAA 118039 PASS INDEL;BAVGPOST=0.973;BRSQ=0.954;LDAF=0.5192;AVGPOST=0.9748;RSQ=0.9666;ERATE=0.0036;THETA=0.0005;AC=1148;AN=2184 GT:DS:GL:BD 0.52564102 1
1 78842782 . A AAATG 39971 PASS INDEL;BAVGPOST=0.967;BRSQ=0.945;LDAF=0.5075;AVGPOST=0.9512;RSQ=0.9362;ERATE=0.0140;THETA=0.0005;AC=1131;AN=2184 GT:DS:GL:BD 0.51785713 1
1 78842784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2489;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 78842818 . CG C 2718 PASS INDEL;BAVGPOST=0.992;BRSQ=0.830;LDAF=0.0257;AVGPOST=0.9949;RSQ=0.9222;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78842897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0687;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 78842904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0669;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 78842965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78843027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78843062 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7858;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78843108 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0700;AVGPOST=0.9979;RSQ=0.9897;ERATE=0.0004;THETA=0.0007;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 78843212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0077;AVGPOST=0.9986;RSQ=0.9297;ERATE=0.0003;THETA=0.0046;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78843225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78843313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5682;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78843365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9641;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78843396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.686;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78843545 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0090;AVGPOST=0.9992;RSQ=0.9669;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78843557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9797;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78843668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.8030;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78843793 . TC T 421 PASS INDEL;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.9119;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78843803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5316;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78843806 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78843882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78843885 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78843892 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0665;AVGPOST=0.9990;RSQ=0.9934;ERATE=0.0004;THETA=0.0004;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 78843895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.7783;AVGPOST=0.9958;RSQ=0.9927;ERATE=0.0027;THETA=0.0016;AC=1699;AN=2184 GT:DS:GL:BD 0.77793038 1
1 78844035 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7590;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78844046 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9716;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78844100 . TCTTCC T 227 PASS INDEL;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0041;AVGPOST=0.9983;RSQ=0.8320;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78844255 . CA C 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78844328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78844406 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78844466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1565;AVGPOST=0.9981;RSQ=0.9950;ERATE=0.0005;THETA=0.0003;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 78844533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5718;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78844604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.7635;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0005;THETA=0.0004;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 78844606 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8661;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78844638 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7374;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78844729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78844786 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9584;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78844812 . CAT C 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5394;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78844951 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5828;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78844984 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.930;LDAF=0.0177;AVGPOST=0.9981;RSQ=0.9568;ERATE=0.0003;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78845130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9996;RSQ=0.9889;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78845239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78845287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6386;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78845331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78845458 . CAAGTT C 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0039;AVGPOST=0.9941;RSQ=0.3788;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78845461 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0086;AVGPOST=0.9977;RSQ=0.8897;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78845479 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78845525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0311;AVGPOST=0.9989;RSQ=0.9873;ERATE=0.0003;THETA=0.0007;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78845544 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78845670 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78845780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78845835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78845875 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78845878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5351;AVGPOST=0.9968;RSQ=0.9958;ERATE=0.0010;THETA=0.0008;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 78846077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.511;LDAF=0.0084;AVGPOST=0.9893;RSQ=0.5130;ERATE=0.0025;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78846172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78846284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7890;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78846349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.710;LDAF=0.0065;AVGPOST=0.9933;RSQ=0.6110;ERATE=0.0008;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78846392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.648;LDAF=0.0034;AVGPOST=0.9981;RSQ=0.7469;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78846578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0042;AVGPOST=0.9943;RSQ=0.5030;ERATE=0.0010;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78846581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9973;RSQ=0.8285;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78846599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78846704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6999;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78846750 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78846771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4956;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78846817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8452;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78846946 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0127;AVGPOST=0.9994;RSQ=0.9823;ERATE=0.0003;THETA=0.0013;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78847101 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2260;AVGPOST=0.9965;RSQ=0.9921;ERATE=0.0006;THETA=0.0018;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 78847224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6639;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78847488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6670;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78847489 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78847496 . CT C 656 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9663;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78847535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0154;AVGPOST=0.9982;RSQ=0.9582;ERATE=0.0003;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78847917 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.0902;AVGPOST=0.9971;RSQ=0.9880;ERATE=0.0004;THETA=0.0004;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 78847965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78848278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78848360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78848437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78848782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78848789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0107;AVGPOST=0.9979;RSQ=0.9223;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78849149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5139;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78849150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0146;AVGPOST=0.9984;RSQ=0.9617;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78849196 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1957;AVGPOST=0.9967;RSQ=0.9921;ERATE=0.0004;THETA=0.0003;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 78849310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9979;RSQ=0.9562;ERATE=0.0004;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78849437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9706;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78849468 . CCCACCTGCCCCG C 192 PASS INDEL;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5045;ERATE=0.0009;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78849548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0033;AVGPOST=0.9959;RSQ=0.5289;ERATE=0.0010;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78849560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0028;AVGPOST=0.9966;RSQ=0.5807;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78849602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0111;AVGPOST=0.9975;RSQ=0.9219;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78849622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7879;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78849726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78849772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78849809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78849818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78849832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0247;AVGPOST=0.9991;RSQ=0.9870;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78849875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1952;AVGPOST=0.9982;RSQ=0.9952;ERATE=0.0005;THETA=0.0029;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 78849910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9435;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78849920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7465;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78849991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78850113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3158;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 78850156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1678;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 78850270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.973;LDAF=0.0381;AVGPOST=0.9978;RSQ=0.9751;ERATE=0.0003;THETA=0.0003;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 78850431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7025;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78850573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4837;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78850590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9258;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78850648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78850721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9652;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78850769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7916;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78850804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3358;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 78850872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5718;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78851070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78851153 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78851170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78851235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78851293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78851377 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78851484 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78851535 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78851625 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78851697 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78851700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7323;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78851728 rs3835624 CTGTAAATCGGCTCTA C 3176 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78851813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6234;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78852110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0251;AVGPOST=0.9991;RSQ=0.9864;ERATE=0.0003;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78852156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9983;RSQ=0.8765;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78852189 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78852312 . T TA 119 PASS INDEL;BAVGPOST=0.994;BRSQ=0.448;LDAF=0.0079;AVGPOST=0.9927;RSQ=0.6444;ERATE=0.0011;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78852426 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0983;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 78852432 . G GA 3032 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0254;AVGPOST=0.9973;RSQ=0.9583;ERATE=0.0006;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78852484 . GA G 234 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.7955;ERATE=0.0007;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78852489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9957;RSQ=0.7703;ERATE=0.0007;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78852490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4352;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78852521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78852585 . AAC A 227 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8019;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78852592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8175;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78852633 . C CTA 17124 PASS INDEL;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3292;AVGPOST=0.9837;RSQ=0.9744;ERATE=0.0031;THETA=0.0004;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 78852661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.845;LDAF=0.0166;AVGPOST=0.9916;RSQ=0.8039;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78852791 . CATGT C 802 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78852793 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8631;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78852820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.978;LDAF=0.1080;AVGPOST=0.9975;RSQ=0.9908;ERATE=0.0004;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 78852882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78853086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7436;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78853145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3404;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 78853244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0097;AVGPOST=0.9965;RSQ=0.8502;ERATE=0.0006;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78853354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0208;AVGPOST=0.9995;RSQ=0.9877;ERATE=0.0004;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78853369 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78853420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2372;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0004;THETA=0.0006;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 78853430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78853446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8775;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78853498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78853509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78853573 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.8712;AVGPOST=0.9898;RSQ=0.9660;ERATE=0.0005;THETA=0.0002;AC=1905;AN=2184 GT:DS:GL:BD 0.87225276 1
1 78853664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78853748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78853849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78853914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78853942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78854132 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9195;ERATE=0.0002;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78854200 . GC G 103 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5901;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78854203 . TG T 1432 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0156;AVGPOST=0.9988;RSQ=0.9632;ERATE=0.0005;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78854213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6362;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78854232 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.8039;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78854234 . TC T 221 PASS INDEL;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7883;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78854515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78854521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0480;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78854545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6334;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78854577 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9988;RSQ=0.9669;ERATE=0.0002;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78854578 . AG A 2731 PASS INDEL;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0479;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78854644 . GA G 1915 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0002;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78854780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0481;AVGPOST=0.9995;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78854881 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7369;AVGPOST=0.9974;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=1610;AN=2184 GT:DS:GL:BD 0.73717946 1
1 78855065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8348;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78855162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78855198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.833;LDAF=0.0090;AVGPOST=0.9979;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78855213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2918;AVGPOST=0.9974;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 78855255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78855301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9992;RSQ=0.9702;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78855350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0370;AVGPOST=0.9987;RSQ=0.9854;ERATE=0.0004;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78855395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0002;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78855576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78855630 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8577;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78855651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8214;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78855766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9401;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78855771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7037;ERATE=0.0003;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78855774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78855781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7647;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78855812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0002;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78855900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9553;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78855967 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.7356;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78856023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4483;AVGPOST=0.9944;RSQ=0.9921;ERATE=0.0005;THETA=0.0006;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 78856042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9824;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78856191 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9993;RSQ=0.9728;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78856208 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8970;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78856315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0034;AVGPOST=0.9959;RSQ=0.5744;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78856326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0496;AVGPOST=0.9984;RSQ=0.9871;ERATE=0.0004;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 78856367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1267;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 78856636 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0957;AVGPOST=0.9992;RSQ=0.9974;ERATE=0.0002;THETA=0.0008;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 78856751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78856915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5584;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78856919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78856928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8753;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78856938 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9556;ERATE=0.0002;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78856992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78857019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78857183 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0481;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78857234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78857293 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0481;AVGPOST=0.9995;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78857315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0233;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0002;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78857408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0159;AVGPOST=0.9991;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78857452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6686;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78857462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0491;AVGPOST=0.9980;RSQ=0.9846;ERATE=0.0003;THETA=0.0007;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78857468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6656;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78857509 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0131;AVGPOST=0.9994;RSQ=0.9804;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78857642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7263;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78857647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0931;AVGPOST=0.9973;RSQ=0.9911;ERATE=0.0003;THETA=0.0010;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 78857648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.7994;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78857790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0002;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78857888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78857988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78857989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78858014 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78858174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7278;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78858185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1258;AVGPOST=0.9986;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 78858187 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4847;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78858215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78858362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0088;AVGPOST=0.9975;RSQ=0.8945;ERATE=0.0002;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78858420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3871;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0006;THETA=0.0004;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 78858428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9856;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78858485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78858608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78858640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1276;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0004;THETA=0.0006;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 78858663 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0406;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0002;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 78858757 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0002;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78858861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78858924 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0240;AVGPOST=0.9994;RSQ=0.9889;ERATE=0.0002;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78858967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0489;AVGPOST=0.9989;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 78859004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6900;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78859100 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78859157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8997;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78859191 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0317;AVGPOST=0.9975;RSQ=0.9757;ERATE=0.0003;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78859245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0215;AVGPOST=0.9963;RSQ=0.9349;ERATE=0.0005;THETA=0.0014;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78859400 . G GC 383 PASS INDEL;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5197;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78859418 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78859445 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78859459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0164;AVGPOST=0.9981;RSQ=0.9582;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78859495 . GC G 10398 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0647;AVGPOST=0.9966;RSQ=0.9772;ERATE=0.0005;THETA=0.0007;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 78859555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8196;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78859590 . TC T 110 PASS INDEL;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5164;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78859625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7308;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78859759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9895;ERATE=0.0003;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78859783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5537;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78859870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6402;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78859970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78860060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78860076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78860514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0074;AVGPOST=0.9975;RSQ=0.8748;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78860543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78860681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9063;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78860704 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8632;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78860778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9685;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78860872 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.8231;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78860899 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0049;AVGPOST=0.9982;RSQ=0.8698;ERATE=0.0005;THETA=0.0030;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78860906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8184;ERATE=0.0004;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78860939 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0085;AVGPOST=0.9960;RSQ=0.8238;ERATE=0.0008;THETA=0.0057;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78860983 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78861149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78861444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9179;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78861605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3530;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78861645 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0296;AVGPOST=0.9973;RSQ=0.9660;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 78861752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7994;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78861758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78861766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78861776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78861936 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78861970 . AC A 9 PASS INDEL;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.6590;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78861978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7000;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78862009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0091;AVGPOST=0.9987;RSQ=0.9501;ERATE=0.0005;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78862102 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0100;AVGPOST=0.9982;RSQ=0.9325;ERATE=0.0006;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78862235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0093;AVGPOST=0.9984;RSQ=0.9386;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78862239 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0540;AVGPOST=0.9876;RSQ=0.9036;ERATE=0.0006;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 78862386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0043;AVGPOST=0.9963;RSQ=0.6960;ERATE=0.0004;THETA=0.0024;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78862408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0306;AVGPOST=0.9961;RSQ=0.9555;ERATE=0.0004;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 78862540 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78862612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0100;AVGPOST=0.9980;RSQ=0.9338;ERATE=0.0004;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78862743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6364;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78862817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5240;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78862861 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.779;LDAF=0.9960;AVGPOST=0.9964;RSQ=0.6551;ERATE=0.0005;THETA=0.0003;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 78862866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6496;ERATE=0.0003;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78862925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0645;AVGPOST=0.9979;RSQ=0.9875;ERATE=0.0003;THETA=0.0023;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 78862973 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78863021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0086;AVGPOST=0.9996;RSQ=0.9854;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78863135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78863158 . CCT C 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0051;AVGPOST=0.9921;RSQ=0.4439;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78863158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9825;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78863189 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0087;AVGPOST=0.9995;RSQ=0.9766;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78863225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78863247 . G GA 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4898;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78863296 . T TG 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5756;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78863340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7731;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78863644 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9979;RSQ=0.9446;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78863757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0229;AVGPOST=0.9990;RSQ=0.9847;ERATE=0.0003;THETA=0.0027;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78863846 . C CTTTT 13532 PASS INDEL;BAVGPOST=0.962;BRSQ=0.909;LDAF=0.2644;AVGPOST=0.9610;RSQ=0.9263;ERATE=0.0108;THETA=0.0006;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 78864041 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.954;LDAF=0.0728;AVGPOST=0.9964;RSQ=0.9803;ERATE=0.0003;THETA=0.0003;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 78864055 . T TGTG 1093 PASS INDEL;BAVGPOST=0.981;BRSQ=0.841;LDAF=0.0713;AVGPOST=0.9903;RSQ=0.9418;ERATE=0.0015;THETA=0.0006;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 78864059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0086;AVGPOST=0.9996;RSQ=0.9845;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78864081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.559;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.6930;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78864126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.879;LDAF=0.0189;AVGPOST=0.9928;RSQ=0.8605;ERATE=0.0004;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78864236 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78864338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78864398 . C CT 1773 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9989;RSQ=0.9668;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78864428 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9879;ERATE=0.0002;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78864499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78864658 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.962;LDAF=0.1111;AVGPOST=0.9885;RSQ=0.9600;ERATE=0.0003;THETA=0.0005;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 78864784 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1111;AVGPOST=0.9875;RSQ=0.9570;ERATE=0.0003;THETA=0.0003;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 78864785 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78864789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0233;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0002;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78864807 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9818;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78864836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78864837 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0122;AVGPOST=0.9989;RSQ=0.9581;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78865055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6006;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78865104 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.877;LDAF=0.0106;AVGPOST=0.9963;RSQ=0.8723;ERATE=0.0005;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78865158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0277;AVGPOST=0.9994;RSQ=0.9902;ERATE=0.0002;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78865203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6170;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78865207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0072;AVGPOST=0.9963;RSQ=0.7897;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78865288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.870;LDAF=0.0123;AVGPOST=0.9959;RSQ=0.8838;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78865337 . C CG 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7924;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78865443 . C CCT 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78865458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78865524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0394;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 78865544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78865564 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5776;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78865609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6447;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78865611 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0092;AVGPOST=0.9986;RSQ=0.9401;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78865742 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1548;AVGPOST=0.9976;RSQ=0.9920;ERATE=0.0004;THETA=0.0008;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 78865772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9991;RSQ=0.1841;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78865839 . C CT 74 PASS INDEL;BAVGPOST=0.982;BRSQ=0.539;LDAF=0.0356;AVGPOST=0.9584;RSQ=0.5099;ERATE=0.0108;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78865841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1271;AVGPOST=0.9974;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 78865900 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8909;AVGPOST=0.9969;RSQ=0.9860;ERATE=0.0004;THETA=0.0004;AC=1948;AN=2184 GT:DS:GL:BD 0.89194137 1
1 78865969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.660;LDAF=0.0045;AVGPOST=0.9978;RSQ=0.7936;ERATE=0.0007;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78865979 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.883;LDAF=0.0465;AVGPOST=0.9835;RSQ=0.8704;ERATE=0.0021;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 78866033 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78866101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.930;LDAF=0.0278;AVGPOST=0.9968;RSQ=0.9549;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78866106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1269;AVGPOST=0.9962;RSQ=0.9875;ERATE=0.0004;THETA=0.0007;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 78866108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78866113 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0243;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0002;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78866187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9624;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78866270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0081;AVGPOST=0.9982;RSQ=0.9256;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78866290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.740;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8889;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78866325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78866356 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6451;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78866379 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8043;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78866381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78866430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78866518 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0278;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0002;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78866647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5590;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78866676 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6239;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78866688 . T TC 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0018;AVGPOST=0.9976;RSQ=0.5319;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78866726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0269;AVGPOST=0.9959;RSQ=0.9525;ERATE=0.0002;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78866764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5107;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78866768 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7986;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78866776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.457;LDAF=0.0048;AVGPOST=0.9931;RSQ=0.3993;ERATE=0.0010;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78866867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.554;LDAF=0.0100;AVGPOST=0.9949;RSQ=0.7827;ERATE=0.0007;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78866898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0116;AVGPOST=0.9990;RSQ=0.9640;ERATE=0.0004;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78866971 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1435;AVGPOST=0.9944;RSQ=0.9806;ERATE=0.0006;THETA=0.0004;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 78867074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0138;AVGPOST=0.9965;RSQ=0.9047;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78867096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.909;LDAF=0.0313;AVGPOST=0.9887;RSQ=0.8687;ERATE=0.0017;THETA=0.0009;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 78867145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.519;LDAF=0.0130;AVGPOST=0.9842;RSQ=0.5281;ERATE=0.0034;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78867146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9287;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78867218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.924;LDAF=0.0426;AVGPOST=0.9955;RSQ=0.9636;ERATE=0.0007;THETA=0.0007;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 78867245 . CT C 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0033;AVGPOST=0.9959;RSQ=0.5449;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78867304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8417;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78867373 . C CA 105 PASS INDEL;BAVGPOST=0.988;BRSQ=0.427;LDAF=0.0155;AVGPOST=0.9934;RSQ=0.8311;ERATE=0.0008;THETA=0.0001;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78867409 . G GA 407 PASS INDEL;BAVGPOST=0.985;BRSQ=0.620;LDAF=0.0197;AVGPOST=0.9880;RSQ=0.7689;ERATE=0.0014;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78867421 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5611;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78867458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78867640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78867732 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8824;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78868040 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9830;ERATE=0.0002;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78868095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8242;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78868132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9721;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78868330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78868497 . G GCAT 40027 PASS INDEL;BAVGPOST=0.947;BRSQ=0.813;LDAF=0.8119;AVGPOST=0.9166;RSQ=0.7884;ERATE=0.0383;THETA=0.0003;AC=1819;AN=2184 GT:DS:GL:BD 0.83287543 1
1 78868670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9281;ERATE=0.0009;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78868818 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9803;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78869025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1040;AVGPOST=0.9972;RSQ=0.9888;ERATE=0.0003;THETA=0.0005;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 78869046 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78869047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9985;RSQ=0.8811;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78869117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6946;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78869302 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.3158;AVGPOST=0.9923;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 78869529 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78869572 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6374;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78869604 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78869607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78869746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78869856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0002;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78869869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1667;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 78869893 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0102;AVGPOST=0.9982;RSQ=0.9264;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78869975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0114;AVGPOST=0.9992;RSQ=0.9729;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78869976 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5272;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78869980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1515;AVGPOST=0.9964;RSQ=0.9892;ERATE=0.0008;THETA=0.0003;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 78870030 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0128;AVGPOST=0.9988;RSQ=0.9622;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78870053 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78870184 rs34498453 TA T 8607 PASS INDEL;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1673;AVGPOST=0.9961;RSQ=0.9898;ERATE=0.0007;THETA=0.0006;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 78870318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0041;AVGPOST=0.9967;RSQ=0.6664;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78870577 . TAATA T 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8028;ERATE=0.0003;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78870667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8891;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78870725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78870786 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6244;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78871051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0054;AVGPOST=0.9967;RSQ=0.7689;ERATE=0.0004;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78871195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8379;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78871246 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9261;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78871363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9836;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78871469 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78871541 . T TG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6303;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78871624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.9304;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78871743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78871804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78871845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78872137 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7001;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78872271 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.635;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78872324 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2037;AVGPOST=0.9933;RSQ=0.9840;ERATE=0.0006;THETA=0.0005;AC=443;AN=2184 GT:DS:GL:BD 0.20283882 0
1 78872414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0155;AVGPOST=0.9986;RSQ=0.9618;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78872447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1269;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 78872511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7385;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78872545 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.8268;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78872576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78872613 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78873024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7266;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 78873027 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78873132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78873181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1263;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 78873183 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78873301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6969;AVGPOST=0.9979;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=1523;AN=2184 GT:DS:GL:BD 0.69734430 1
1 78873303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9808;ERATE=0.0002;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78873386 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9840;ERATE=0.0002;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78873546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0786;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0002;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 78873560 rs60330642 C CTTTAT 9722 PASS INDEL;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0391;AVGPOST=0.9983;RSQ=0.9840;ERATE=0.0006;THETA=0.0007;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 78873564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78873581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.840;LDAF=0.0097;AVGPOST=0.9961;RSQ=0.8780;ERATE=0.0002;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78873781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6249;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78873798 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9782;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78873996 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8825;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78874241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6670;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78874248 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.4859;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78874250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78874377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4370;ERATE=0.0002;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78874424 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78874494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78874514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7040;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78874515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0049;AVGPOST=0.9987;RSQ=0.8801;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78874628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78874656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0511;AVGPOST=0.9964;RSQ=0.9692;ERATE=0.0004;THETA=0.0007;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 78874727 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9525;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78874911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78874957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3652;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 78875037 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4661;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78875080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7549;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78875267 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.4631;AVGPOST=0.9926;RSQ=0.9893;ERATE=0.0009;THETA=0.0002;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 78875327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.954;LDAF=0.8236;AVGPOST=0.9867;RSQ=0.9657;ERATE=0.0011;THETA=0.0005;AC=1806;AN=2184 GT:DS:GL:BD 0.82692307 1
1 78875344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3649;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0006;THETA=0.0008;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 78875374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6939;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78875378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0059;AVGPOST=0.9956;RSQ=0.6830;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78875385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3651;AVGPOST=0.9957;RSQ=0.9925;ERATE=0.0009;THETA=0.0004;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 78875388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.593;LDAF=0.0136;AVGPOST=0.9837;RSQ=0.5382;ERATE=0.0027;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78875432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.555;LDAF=0.9904;AVGPOST=0.9868;RSQ=0.4612;ERATE=0.0016;THETA=0.0004;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 78875472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8747;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78875556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78875564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0166;AVGPOST=0.9951;RSQ=0.8887;ERATE=0.0008;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78875703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0044;AVGPOST=0.9964;RSQ=0.6364;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78875738 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.956;LDAF=0.4704;AVGPOST=0.9718;RSQ=0.9613;ERATE=0.0039;THETA=0.0004;AC=1035;AN=2184 GT:DS:GL:BD 0.47390109 0
1 78875770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.954;LDAF=0.0850;AVGPOST=0.9942;RSQ=0.9753;ERATE=0.0004;THETA=0.0004;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 78875811 . GC G 8824 PASS INDEL;BAVGPOST=0.990;BRSQ=0.948;LDAF=0.0856;AVGPOST=0.9951;RSQ=0.9801;ERATE=0.0004;THETA=0.0005;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 78875832 . CA C 823 PASS INDEL;BAVGPOST=0.982;BRSQ=0.902;LDAF=0.0781;AVGPOST=0.9894;RSQ=0.9535;ERATE=0.0005;THETA=0.0027;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 78875836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.945;LDAF=0.4044;AVGPOST=0.9471;RSQ=0.9180;ERATE=0.0113;THETA=0.0003;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 78875876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.740;LDAF=0.0131;AVGPOST=0.9911;RSQ=0.7222;ERATE=0.0007;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78875879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0048;AVGPOST=0.9943;RSQ=0.5704;ERATE=0.0009;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78875951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3644;AVGPOST=0.9948;RSQ=0.9916;ERATE=0.0007;THETA=0.0004;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 78876019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.980;LDAF=0.8369;AVGPOST=0.9851;RSQ=0.9585;ERATE=0.0020;THETA=0.0006;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 78876048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.960;LDAF=0.8170;AVGPOST=0.9752;RSQ=0.9420;ERATE=0.0022;THETA=0.0006;AC=1799;AN=2184 GT:DS:GL:BD 0.82371795 1
1 78876097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9377;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78876304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.8424;AVGPOST=0.9939;RSQ=0.9824;ERATE=0.0006;THETA=0.0002;AC=1844;AN=2184 GT:DS:GL:BD 0.84432232 1
1 78876307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0111;AVGPOST=0.9989;RSQ=0.9587;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78876407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0137;AVGPOST=0.9933;RSQ=0.8002;ERATE=0.0005;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78876477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4238;AVGPOST=0.9927;RSQ=0.9886;ERATE=0.0010;THETA=0.0006;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 78876602 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.8957;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78876641 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9529;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78876646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0071;AVGPOST=0.9972;RSQ=0.8651;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78876663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.4732;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78876664 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4691;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78876665 . T TTA 18 PASS INDEL;BAVGPOST=0.998;BRSQ=0.637;LDAF=0.0073;AVGPOST=0.9914;RSQ=0.5373;ERATE=0.0012;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78876696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.695;LDAF=0.0047;AVGPOST=0.9951;RSQ=0.5759;ERATE=0.0008;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78876705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0033;AVGPOST=0.9943;RSQ=0.2781;ERATE=0.0010;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78876706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0155;AVGPOST=0.9963;RSQ=0.9095;ERATE=0.0005;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78876767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.829;LDAF=0.0166;AVGPOST=0.9926;RSQ=0.8339;ERATE=0.0006;THETA=0.0020;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78876768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.488;LDAF=0.0093;AVGPOST=0.9903;RSQ=0.6000;ERATE=0.0010;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78876769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0892;AVGPOST=0.9955;RSQ=0.9815;ERATE=0.0005;THETA=0.0006;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 78876817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0090;AVGPOST=0.9989;RSQ=0.9512;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78876834 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0146;AVGPOST=0.9979;RSQ=0.9403;ERATE=0.0004;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78876872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5117;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78876886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.928;LDAF=0.0201;AVGPOST=0.9966;RSQ=0.9351;ERATE=0.0005;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78876920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.4597;AVGPOST=0.9896;RSQ=0.9854;ERATE=0.0006;THETA=0.0014;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 78876938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0146;AVGPOST=0.9980;RSQ=0.9401;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78876949 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9854;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78877013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.4549;AVGPOST=0.9826;RSQ=0.9752;ERATE=0.0038;THETA=0.0006;AC=997;AN=2184 GT:DS:GL:BD 0.45650184 0
1 78877078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.760;LDAF=0.0138;AVGPOST=0.9934;RSQ=0.8146;ERATE=0.0008;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78877151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.915;LDAF=0.1281;AVGPOST=0.9186;RSQ=0.7502;ERATE=0.0117;THETA=0.0014;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 78877259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0051;AVGPOST=0.9981;RSQ=0.8407;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78877361 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3463;AVGPOST=0.9869;RSQ=0.9787;ERATE=0.0011;THETA=0.0005;AC=759;AN=2184 GT:DS:GL:BD 0.34752747 0
1 78877386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.602;LDAF=0.0147;AVGPOST=0.9856;RSQ=0.6227;ERATE=0.0009;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78877418 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9017;ERATE=0.0005;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78877422 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0204;AVGPOST=0.9972;RSQ=0.9486;ERATE=0.0004;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78877436 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9618;ERATE=0.0004;THETA=0.0027;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78877476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0038;AVGPOST=0.9943;RSQ=0.3745;ERATE=0.0011;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78877640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5264;ERATE=0.0005;THETA=0.0057;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78877784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.3737;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78877916 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.926;LDAF=0.3349;AVGPOST=0.9705;RSQ=0.9523;ERATE=0.0020;THETA=0.0013;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 78878051 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0144;AVGPOST=0.9994;RSQ=0.9812;ERATE=0.0005;THETA=0.0011;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78878070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9544;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78878150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0120;AVGPOST=0.9972;RSQ=0.9294;ERATE=0.0003;THETA=0.0025;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78878155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6742;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78878166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0173;AVGPOST=0.9965;RSQ=0.9210;ERATE=0.0003;THETA=0.0034;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78878170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.969;LDAF=0.4776;AVGPOST=0.9849;RSQ=0.9790;ERATE=0.0007;THETA=0.0014;AC=1048;AN=2184 GT:DS:GL:BD 0.47985348 0
1 78878185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0059;AVGPOST=0.9980;RSQ=0.8696;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78878186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.913;LDAF=0.8000;AVGPOST=0.9565;RSQ=0.9035;ERATE=0.0053;THETA=0.0007;AC=1770;AN=2184 GT:DS:GL:BD 0.81043959 1
1 78878197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.952;LDAF=0.0465;AVGPOST=0.9910;RSQ=0.9316;ERATE=0.0004;THETA=0.0008;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 78878198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0243;AVGPOST=0.9867;RSQ=0.8020;ERATE=0.0013;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78878241 . CCT C 325 PASS INDEL;BAVGPOST=0.996;BRSQ=0.707;LDAF=0.0085;AVGPOST=0.9957;RSQ=0.7979;ERATE=0.0006;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78878336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0050;AVGPOST=0.9960;RSQ=0.6786;ERATE=0.0010;THETA=0.0040;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78878468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.871;LDAF=0.0304;AVGPOST=0.9929;RSQ=0.9164;ERATE=0.0007;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 78878487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9161;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78878493 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.938;LDAF=0.3112;AVGPOST=0.9641;RSQ=0.9384;ERATE=0.0069;THETA=0.0007;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 78878504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.892;BRSQ=0.783;LDAF=0.3335;AVGPOST=0.8668;RSQ=0.7747;ERATE=0.0186;THETA=0.0008;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 78878529 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.674;LDAF=0.0099;AVGPOST=0.9943;RSQ=0.7743;ERATE=0.0007;THETA=0.0010;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78878541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.817;LDAF=0.0421;AVGPOST=0.9847;RSQ=0.8528;ERATE=0.0029;THETA=0.0010;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 78878549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78878551 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.522;LDAF=0.0275;AVGPOST=0.9654;RSQ=0.4797;ERATE=0.0089;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78878575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0179;AVGPOST=0.9944;RSQ=0.8907;ERATE=0.0005;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78878583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.502;LDAF=0.0595;AVGPOST=0.9275;RSQ=0.4999;ERATE=0.0122;THETA=0.0013;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 78878592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.559;LDAF=0.0274;AVGPOST=0.9750;RSQ=0.6648;ERATE=0.0008;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78878611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.883;LDAF=0.2983;AVGPOST=0.9043;RSQ=0.8289;ERATE=0.0127;THETA=0.0083;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 78878614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.928;BRSQ=0.815;LDAF=0.7472;AVGPOST=0.8771;RSQ=0.7645;ERATE=0.0196;THETA=0.0003;AC=1698;AN=2184 GT:DS:GL:BD 0.77747256 1
1 78878749 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0094;AVGPOST=0.9987;RSQ=0.9426;ERATE=0.0003;THETA=0.0039;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78878777 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6720;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78878835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0331;AVGPOST=0.9976;RSQ=0.9759;ERATE=0.0004;THETA=0.0012;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 78878925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7254;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78878981 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0739;AVGPOST=0.9930;RSQ=0.9594;ERATE=0.0004;THETA=0.0013;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 78879039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.739;BRSQ=0.582;LDAF=0.5819;AVGPOST=0.7362;RSQ=0.6037;ERATE=0.0297;THETA=0.0006;AC=1348;AN=2184 GT:DS:GL:BD 0.61721611 1
1 78879079 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.945;LDAF=0.3123;AVGPOST=0.9766;RSQ=0.9603;ERATE=0.0014;THETA=0.0041;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 78879398 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.833;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9497;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78879482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9860;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78879551 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9113;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78879598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78879618 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78879815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6576;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78879903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6868;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78879907 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7502;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78880028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8386;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78880117 . G GA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5869;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78880244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78880488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5207;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78880489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78880499 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7986;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78880543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78880553 . A AC 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4431;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78880573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78880611 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78880624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9426;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78880626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78880718 . CT C 829 PASS INDEL;BAVGPOST=0.996;BRSQ=0.843;LDAF=0.0132;AVGPOST=0.9933;RSQ=0.8339;ERATE=0.0006;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78880817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78880849 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78880925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78880982 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78881019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7402;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78881177 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78881203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6714;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=1469;AN=2184 GT:DS:GL:BD 0.67261904 1
1 78881210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1024;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0003;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 78881352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0896;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 78881388 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78881400 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.886;LDAF=0.0899;AVGPOST=0.9776;RSQ=0.8887;ERATE=0.0723;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 78881414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8373;ERATE=0.0009;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78881419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78881444 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78881465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78881522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78881548 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78881621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78881912 . AG A 109 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7797;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78882094 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9999;RSQ=0.9255;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78882098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78882170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9996;RSQ=0.9727;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78882298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9990;RSQ=0.9931;ERATE=0.0003;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 78882556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.2726;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78882624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4781;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78882686 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9997;RSQ=0.9802;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78882767 . CT C 992 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0081;AVGPOST=0.9962;RSQ=0.8180;ERATE=0.0005;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78882857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5931;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78882899 . AAG A 397 PASS INDEL;BAVGPOST=0.997;BRSQ=0.768;LDAF=0.0113;AVGPOST=0.9903;RSQ=0.6866;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78882929 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9567;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78882958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9269;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78883035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78883047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78883085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0085;AVGPOST=0.9976;RSQ=0.8972;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78883125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78883143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0001;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78883241 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2299;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 78883603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8672;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78883638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78883663 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6402;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78883731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0082;AVGPOST=0.9967;RSQ=0.8416;ERATE=0.0006;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78883949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4124;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78883984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.6932;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78883990 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7443;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78883996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6899;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78884076 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5102;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78884113 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78884115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9663;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78884173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.800;LDAF=0.0136;AVGPOST=0.9928;RSQ=0.8093;ERATE=0.0005;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78884215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0064;AVGPOST=0.9969;RSQ=0.8101;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78884331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4769;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78884369 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2317;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 78884506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78884530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7368;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78884537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.979;LDAF=0.1047;AVGPOST=0.9966;RSQ=0.9870;ERATE=0.0005;THETA=0.0004;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 78884757 . TACTC T 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78885045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9482;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78885085 . ATTAT A 103 PASS INDEL;BAVGPOST=0.997;BRSQ=0.726;LDAF=0.0087;AVGPOST=0.9910;RSQ=0.5998;ERATE=0.0010;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78885349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5246;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78885400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9318;ERATE=0.0003;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78885477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78885667 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.732;LDAF=0.0084;AVGPOST=0.9944;RSQ=0.7446;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78885704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1187;AVGPOST=0.9988;RSQ=0.9960;ERATE=0.0005;THETA=0.0012;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 78885805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.5984;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78885806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0359;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0007;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78886218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78886285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78886381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9669;ERATE=0.0004;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78886406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9529;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78886437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78886451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0587;AVGPOST=0.9988;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 78886468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78886578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9639;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78886709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8282;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78886735 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78886787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7324;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78886891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6674;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78887028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9637;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78887108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78887138 . CCA C 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4350;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78887189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8380;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78887195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78887340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9864;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78887349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1045;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0010;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 78887480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0083;AVGPOST=0.9996;RSQ=0.9762;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78887753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9876;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78887825 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78887890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0280;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0011;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78888001 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9687;ERATE=0.0003;THETA=0.0011;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78888004 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9018;ERATE=0.0004;THETA=0.0043;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78888045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78888126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0687;AVGPOST=0.9988;RSQ=0.9925;ERATE=0.0005;THETA=0.0010;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 78888231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0082;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78888252 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78888299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5683;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78888495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78888668 . AC A 1317 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9988;RSQ=0.9515;ERATE=0.0004;THETA=0.0012;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78888722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0205;AVGPOST=0.9980;RSQ=0.9575;ERATE=0.0005;THETA=0.0011;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78888767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78888795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0091;AVGPOST=0.9990;RSQ=0.9572;ERATE=0.0003;THETA=0.0017;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78888796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9818;ERATE=0.0003;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78888804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0280;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0008;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78888889 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0027;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78888892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0274;AVGPOST=0.9984;RSQ=0.9725;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78888931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78888985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9842;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78889014 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78889093 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6098;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78889096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78889311 . G GCTTACCAAC 1290 PASS INDEL;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0044;AVGPOST=0.9970;RSQ=0.8014;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78889387 . GTCA G 210 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9235;ERATE=0.0004;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78889422 . TCATG T 968 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8617;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78889423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8532;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78889436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0251;AVGPOST=0.9987;RSQ=0.9794;ERATE=0.0003;THETA=0.0008;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78889535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9109;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78889572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6731;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78889586 . T TA 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6974;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78889684 . C CA 682 PASS INDEL;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0050;AVGPOST=0.9968;RSQ=0.7742;ERATE=0.0006;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78889732 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8560;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78889787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78889828 . TAAC T 754 PASS INDEL;BAVGPOST=0.996;BRSQ=0.820;LDAF=0.0120;AVGPOST=0.9961;RSQ=0.8705;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78889898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78889951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2166;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0003;THETA=0.0001;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 78889962 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5682;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78889989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6066;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78890343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8399;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78890384 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4900;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=1070;AN=2184 GT:DS:GL:BD 0.48992673 0
1 78890440 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4899;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0001;AC=1070;AN=2184 GT:DS:GL:BD 0.48992673 0
1 78890469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1732;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 78890492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78890568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8473;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78890616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7515;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78890630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9404;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78890631 . G GTCTTC 321 PASS INDEL;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8502;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78890736 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1721;AVGPOST=0.9983;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 78890737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78890858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1735;AVGPOST=0.9991;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 78890941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0167;AVGPOST=0.9988;RSQ=0.9712;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78891182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6103;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 78891191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7301;AVGPOST=0.9967;RSQ=0.9940;ERATE=0.0005;THETA=0.0003;AC=1594;AN=2184 GT:DS:GL:BD 0.72985345 1
1 78891259 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8288;ERATE=0.0003;THETA=0.0065;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78891281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0216;AVGPOST=0.9996;RSQ=0.9910;ERATE=0.0004;THETA=0.0042;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78891377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5623;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78891507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9048;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78891770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7741;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78891818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9435;ERATE=0.0003;THETA=0.0019;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78891829 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8052;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78891850 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78891851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0155;AVGPOST=0.9990;RSQ=0.9725;ERATE=0.0003;THETA=0.0064;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78891886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0419;AVGPOST=0.9974;RSQ=0.9779;ERATE=0.0003;THETA=0.0057;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 78891901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9577;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78892029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0221;AVGPOST=0.9989;RSQ=0.9831;ERATE=0.0003;THETA=0.0033;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78892106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1508;AVGPOST=0.9966;RSQ=0.9911;ERATE=0.0006;THETA=0.0038;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 78892267 rs5781691 CT C 24213 PASS INDEL;BAVGPOST=0.967;BRSQ=0.941;LDAF=0.3613;AVGPOST=0.9735;RSQ=0.9580;ERATE=0.0015;THETA=0.0006;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 78892290 rs5781692 AG A 32826 PASS INDEL;BAVGPOST=0.967;BRSQ=0.942;LDAF=0.3617;AVGPOST=0.9783;RSQ=0.9646;ERATE=0.0008;THETA=0.0005;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 78892296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9286;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78892424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78892497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78892500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0200;AVGPOST=0.9993;RSQ=0.9857;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78892524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8529;ERATE=0.0004;THETA=0.0054;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78892528 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5950;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78892667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78892712 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9082;ERATE=0.0004;THETA=0.0051;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78892739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0187;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0003;THETA=0.0037;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78892766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0034;AVGPOST=0.9980;RSQ=0.8041;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78892790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1015;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 78892979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8621;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78893000 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0417;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 78893224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1014;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0015;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 78893278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78893323 . TAGAA T 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78893389 . AG A 632 PASS INDEL;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0077;AVGPOST=0.9966;RSQ=0.8419;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78893540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78893579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0124;AVGPOST=0.9995;RSQ=0.9804;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78893581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8546;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78893771 rs111844929 TG T 1372 PASS INDEL;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0208;AVGPOST=0.9973;RSQ=0.9511;ERATE=0.0007;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78893798 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0337;AVGPOST=0.9983;RSQ=0.9812;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 78893824 . CTAA C 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8811;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78893845 . TAATA T 421 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0052;AVGPOST=0.9977;RSQ=0.8179;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78893846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5486;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78893867 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.668;LDAF=0.0092;AVGPOST=0.9902;RSQ=0.5815;ERATE=0.0015;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78893921 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7747;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78894085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1262;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 78894147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0345;AVGPOST=0.9972;RSQ=0.9729;ERATE=0.0003;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 78894232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8976;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78894249 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78894293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78894441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78894454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6938;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78894477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.900;LDAF=0.0208;AVGPOST=0.9946;RSQ=0.9052;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78894548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0127;AVGPOST=0.9993;RSQ=0.9743;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78894627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3466;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0008;THETA=0.0004;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 78894628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0306;AVGPOST=0.9993;RSQ=0.9923;ERATE=0.0003;THETA=0.0010;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 78894642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1253;AVGPOST=0.9985;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 78894650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0305;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78894653 . CAT C 28 PASS INDEL;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4549;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78894675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78894699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6281;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=1373;AN=2184 GT:DS:GL:BD 0.62866300 1
1 78894751 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0138;AVGPOST=0.9968;RSQ=0.9332;ERATE=0.0002;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78894969 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6687;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78895052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8763;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78895324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78895367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9094;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=1986;AN=2184 GT:DS:GL:BD 0.90934068 1
1 78895415 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4722;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78895551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0002;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78895619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1744;AVGPOST=0.9939;RSQ=0.9822;ERATE=0.0004;THETA=0.0003;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 78895636 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78895650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4057;AVGPOST=0.9956;RSQ=0.9925;ERATE=0.0006;THETA=0.0003;AC=889;AN=2184 GT:DS:GL:BD 0.40705130 0
1 78895664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7626;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78895719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4068;AVGPOST=0.9960;RSQ=0.9932;ERATE=0.0008;THETA=0.0006;AC=891;AN=2184 GT:DS:GL:BD 0.40796703 0
1 78895736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4513;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78895877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4335;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78895878 . G GA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.3887;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78895921 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8668;AVGPOST=0.9970;RSQ=0.9916;ERATE=0.0006;THETA=0.0004;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 78896154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9258;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78896194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1333;AVGPOST=0.9951;RSQ=0.9859;ERATE=0.0006;THETA=0.0003;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 78896423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4718;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78896478 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0002;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78896553 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9810;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78896644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0021;AVGPOST=0.9969;RSQ=0.5448;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78896729 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.664;LDAF=0.0102;AVGPOST=0.9944;RSQ=0.7681;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78896763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.515;LDAF=0.0035;AVGPOST=0.9957;RSQ=0.5034;ERATE=0.0006;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78896937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0058;AVGPOST=0.9947;RSQ=0.6833;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78896938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1204;AVGPOST=0.9915;RSQ=0.9686;ERATE=0.0014;THETA=0.0002;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 78896944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.966;LDAF=0.4059;AVGPOST=0.9613;RSQ=0.9408;ERATE=0.0041;THETA=0.0006;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 78896960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.793;LDAF=0.8350;AVGPOST=0.8823;RSQ=0.6909;ERATE=0.0115;THETA=0.0003;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 78896976 rs56772583 CAAAAA C 1206 PASS INDEL;BAVGPOST=0.697;BRSQ=0.403;LDAF=0.3269;AVGPOST=0.7721;RSQ=0.5931;ERATE=0.0114;THETA=0.0005;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 78896980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8941;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78897046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8699;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78897195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6456;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78897218 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9471;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78897225 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4445;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78897321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78897345 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0412;AVGPOST=0.9977;RSQ=0.9779;ERATE=0.0004;THETA=0.0002;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 78897358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78897384 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0315;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0002;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 78897397 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0380;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0002;THETA=0.0005;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 78897547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9639;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78897635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0025;AVGPOST=0.9964;RSQ=0.4979;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78897642 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.6512;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78897663 . AT A 163 PASS INDEL;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5584;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78897708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9466;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78897728 . TTAAAG T 1240 PASS INDEL;BAVGPOST=0.995;BRSQ=0.866;LDAF=0.0181;AVGPOST=0.9931;RSQ=0.8629;ERATE=0.0008;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78897729 . TAAAGTA T 4292 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0204;AVGPOST=0.9989;RSQ=0.9825;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78897730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9281;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78897878 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7981;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78897983 . TA T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4710;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78897993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.4907;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78898073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78898074 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1328;AVGPOST=0.9982;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 78898157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0023;AVGPOST=0.9974;RSQ=0.5118;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78898163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3884;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78898275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8063;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78898276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0132;AVGPOST=0.9986;RSQ=0.9506;ERATE=0.0005;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78898290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.2837;AVGPOST=0.9948;RSQ=0.9901;ERATE=0.0007;THETA=0.0004;AC=618;AN=2184 GT:DS:GL:BD 0.28296703 0
1 78898324 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0025;AVGPOST=0.9975;RSQ=0.6570;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78898330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0199;AVGPOST=0.9958;RSQ=0.9285;ERATE=0.0004;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78898407 . TTTTTC T 1646 PASS INDEL;BAVGPOST=0.998;BRSQ=0.895;LDAF=0.0086;AVGPOST=0.9986;RSQ=0.9323;ERATE=0.0006;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78898473 . CT C 1351 PASS INDEL;BAVGPOST=0.991;BRSQ=0.707;LDAF=0.0132;AVGPOST=0.9922;RSQ=0.7786;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78898478 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.957;BRSQ=0.901;LDAF=0.2379;AVGPOST=0.9528;RSQ=0.9102;ERATE=0.0125;THETA=0.0009;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 78898496 . TG T 124 PASS INDEL;BAVGPOST=0.896;BRSQ=0.134;LDAF=0.1337;AVGPOST=0.7974;RSQ=0.2786;ERATE=0.0155;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 78898512 . G GTT 2986 PASS INDEL;BAVGPOST=0.955;BRSQ=0.660;LDAF=0.0940;AVGPOST=0.9183;RSQ=0.6239;ERATE=0.0137;THETA=0.0022;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 78898513 . T TTG 14746 PASS INDEL;BAVGPOST=0.900;BRSQ=0.823;LDAF=0.6165;AVGPOST=0.8220;RSQ=0.7339;ERATE=0.0521;THETA=0.0002;AC=1427;AN=2184 GT:DS:GL:BD 0.65338826 1
1 78898518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0119;AVGPOST=0.9971;RSQ=0.9074;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78898552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78898601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.947;LDAF=0.8445;AVGPOST=0.9558;RSQ=0.8933;ERATE=0.0063;THETA=0.0003;AC=1871;AN=2184 GT:DS:GL:BD 0.85668498 1
1 78898695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0040;AVGPOST=0.9959;RSQ=0.6342;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78898748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4944;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78898752 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78898819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8683;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0002;THETA=0.0006;AC=1896;AN=2184 GT:DS:GL:BD 0.86813188 1
1 78898965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6906;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=1508;AN=2184 GT:DS:GL:BD 0.69047618 1
1 78899042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0104;AVGPOST=0.9960;RSQ=0.8531;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78899049 rs66983465 AT A 8199 PASS INDEL;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1224;AVGPOST=0.9970;RSQ=0.9896;ERATE=0.0006;THETA=0.0002;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 78899089 . A AAT 17 PASS INDEL;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4885;ERATE=0.0005;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78899484 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78899523 . TTTTG T 32 PASS INDEL;BAVGPOST=0.996;BRSQ=0.711;LDAF=0.0114;AVGPOST=0.9857;RSQ=0.5571;ERATE=0.0008;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78899533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1205;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 78899574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78899592 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0077;AVGPOST=0.9932;RSQ=0.6617;ERATE=0.0005;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78899595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4676;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78899625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9395;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78899632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9222;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78899687 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0277;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78899736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1324;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 78899753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7453;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78899809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0022;AVGPOST=0.9965;RSQ=0.4455;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78899901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78899948 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78899962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78899971 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0147;AVGPOST=0.9992;RSQ=0.9785;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78900021 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7154;AVGPOST=0.9977;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=1563;AN=2184 GT:DS:GL:BD 0.71565932 1
1 78900026 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0715;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 78900096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0304;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 78900098 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.956;LDAF=0.8302;AVGPOST=0.9855;RSQ=0.9680;ERATE=0.0004;THETA=0.0004;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 78900177 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6668;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78900243 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0710;AVGPOST=0.9979;RSQ=0.9884;ERATE=0.0005;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 78900290 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9989;RSQ=0.9739;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78900304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.787;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8543;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78900390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78900541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1192;AVGPOST=0.9983;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 78900557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5878;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78900573 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78900581 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1760;AVGPOST=0.9989;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 78900602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78900820 rs112842058 T TA 143 PASS INDEL;BAVGPOST=0.982;BRSQ=0.520;LDAF=0.0329;AVGPOST=0.9564;RSQ=0.4364;ERATE=0.0098;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78900959 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5787;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78901167 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78901174 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78901197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0476;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78901302 . AT A 6613 PASS INDEL;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0483;AVGPOST=0.9986;RSQ=0.9878;ERATE=0.0004;THETA=0.0007;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 78901375 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0477;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78901439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.6489;AVGPOST=0.9929;RSQ=0.9885;ERATE=0.0015;THETA=0.0002;AC=1419;AN=2184 GT:DS:GL:BD 0.64972526 1
1 78901452 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78901519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9261;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78901538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8799;ERATE=0.0005;THETA=0.0051;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78901567 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0134;AVGPOST=0.9987;RSQ=0.9684;ERATE=0.0003;THETA=0.0067;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78901599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0159;AVGPOST=0.9983;RSQ=0.9576;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78901604 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4818;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78901761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7745;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78901773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9464;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78901916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3184;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 78901928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0149;AVGPOST=0.9990;RSQ=0.9751;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78901943 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78902076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3224;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0005;THETA=0.0004;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 78902100 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0302;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 78902121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0215;AVGPOST=0.9988;RSQ=0.9776;ERATE=0.0004;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78902208 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3644;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 78902235 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3186;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 78902245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0471;AVGPOST=0.9990;RSQ=0.9906;ERATE=0.0004;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 78902317 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8394;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78902393 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0461;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0006;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 78902416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0461;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0003;THETA=0.0009;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 78902428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8069;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78902458 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4275;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78902464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78902488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3653;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0008;THETA=0.0004;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 78902496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3657;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0007;THETA=0.0005;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 78902565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78902614 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78902628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0460;AVGPOST=0.9990;RSQ=0.9910;ERATE=0.0005;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 78902658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78902672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1129;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 78902755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3496;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0004;THETA=0.0025;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 78902864 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0142;AVGPOST=0.9989;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78902871 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0449;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0010;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 78902906 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78902925 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78902928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78902950 . C CA 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5574;ERATE=0.0006;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78903004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9556;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78903011 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78903024 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78903026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1740;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 78903079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9868;ERATE=0.0003;THETA=0.0019;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78903115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78903129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0127;AVGPOST=0.9987;RSQ=0.9643;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78903229 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0085;AVGPOST=0.9971;RSQ=0.8728;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78903272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7231;ERATE=0.0009;THETA=0.0040;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78903402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7845;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78903408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78903441 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6103;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78903462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0124;AVGPOST=0.9995;RSQ=0.9820;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78903520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0004;THETA=0.0107;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78903563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.1005;AVGPOST=0.9964;RSQ=0.9854;ERATE=0.0004;THETA=0.0057;AC=217;AN=2184 GT:DS:GL:BD 0.09935898 0
1 78903705 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4437;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78903727 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.979;LDAF=0.1378;AVGPOST=0.9908;RSQ=0.9702;ERATE=0.0008;THETA=0.0010;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 78903747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2708;AVGPOST=0.9956;RSQ=0.9930;ERATE=0.0004;THETA=0.0052;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 78903777 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0958;AVGPOST=0.9991;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 78903879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4399;AVGPOST=0.9956;RSQ=0.9938;ERATE=0.0006;THETA=0.0002;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 78903908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1143;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 78903923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.7481;AVGPOST=0.9949;RSQ=0.9902;ERATE=0.0004;THETA=0.0005;AC=1634;AN=2184 GT:DS:GL:BD 0.74816847 1
1 78903963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8112;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78904006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1052;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0001;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 78904027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7238;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78904077 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78904158 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7061;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78904186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5978;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78904235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0859;AVGPOST=0.9982;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 78904244 . ATC A 117 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6432;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78904268 rs71728239 ACACT A 3223 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0193;AVGPOST=0.9989;RSQ=0.9744;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78904415 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9994;RSQ=0.9676;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78904565 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78904721 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=1.0000;RSQ=0.9989;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78904762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1048;AVGPOST=0.9987;RSQ=0.9951;ERATE=0.0004;THETA=0.0009;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 78904773 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5587;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78904907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7534;ERATE=0.0005;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78905429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0034;AVGPOST=0.9993;RSQ=0.9152;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78905445 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9038;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78905468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4169;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78905514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5699;ERATE=0.0004;THETA=0.0117;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78905677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78905714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78905824 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8188;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78905841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0038;AVGPOST=0.9957;RSQ=0.5285;ERATE=0.0012;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78905869 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5655;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78905984 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8450;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78905997 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7179;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78906178 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3378;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78906191 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78906233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0059;AVGPOST=0.9936;RSQ=0.5726;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78906256 . G GC 913 PASS INDEL;BAVGPOST=0.992;BRSQ=0.745;LDAF=0.0134;AVGPOST=0.9941;RSQ=0.8253;ERATE=0.0004;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78906323 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78906691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7789;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78907020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9466;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78907062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.9075;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78907156 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0088;AVGPOST=0.9986;RSQ=0.9323;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78907215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9813;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78907233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6242;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78907250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78907437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.989;LDAF=0.4423;AVGPOST=0.9869;RSQ=0.9832;ERATE=0.0007;THETA=0.0007;AC=967;AN=2184 GT:DS:GL:BD 0.44276556 0
1 78907478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8242;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78907479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7403;AVGPOST=0.9959;RSQ=0.9920;ERATE=0.0005;THETA=0.0010;AC=1617;AN=2184 GT:DS:GL:BD 0.74038464 1
1 78907595 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1858;AVGPOST=0.9966;RSQ=0.9918;ERATE=0.0004;THETA=0.0004;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 78907632 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78907648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5145;ERATE=0.0007;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78907675 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.929;LDAF=0.7199;AVGPOST=0.9570;RSQ=0.9184;ERATE=0.0056;THETA=0.0005;AC=1597;AN=2184 GT:DS:GL:BD 0.73122710 1
1 78907757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.916;LDAF=0.1399;AVGPOST=0.9659;RSQ=0.8971;ERATE=0.0055;THETA=0.0059;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 78907836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.969;LDAF=0.4630;AVGPOST=0.9924;RSQ=0.9893;ERATE=0.0009;THETA=0.0005;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 78907888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.508;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4701;ERATE=0.0006;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78907908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78908014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78908045 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78908088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6891;ERATE=0.0010;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78908102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4147;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78908190 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.804;LDAF=0.0059;AVGPOST=0.9953;RSQ=0.6583;ERATE=0.0016;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78908204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6555;ERATE=0.0004;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78908364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.972;LDAF=0.6309;AVGPOST=0.9853;RSQ=0.9756;ERATE=0.0008;THETA=0.0021;AC=1378;AN=2184 GT:DS:GL:BD 0.63095236 1
1 78908402 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.963;LDAF=0.6692;AVGPOST=0.9834;RSQ=0.9717;ERATE=0.0012;THETA=0.0006;AC=1466;AN=2184 GT:DS:GL:BD 0.67124540 1
1 78908428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6362;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0006;THETA=0.0005;AC=1387;AN=2184 GT:DS:GL:BD 0.63507324 1
1 78908558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6098;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78908582 rs112242650 GCT G 5465 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0462;AVGPOST=0.9982;RSQ=0.9837;ERATE=0.0004;THETA=0.0007;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 78908608 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9209;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78908625 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1039;AVGPOST=0.9965;RSQ=0.9865;ERATE=0.0004;THETA=0.0003;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 78908629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7586;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78908656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8167;ERATE=0.0003;THETA=0.0065;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78908664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8692;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78908758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78908803 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5170;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78908919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0123;AVGPOST=0.9982;RSQ=0.9435;ERATE=0.0003;THETA=0.0037;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78909052 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0086;AVGPOST=0.9987;RSQ=0.9348;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78909228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78909346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78909416 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4951;ERATE=0.0004;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78909434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0039;AVGPOST=0.9988;RSQ=0.8699;ERATE=0.0011;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78909544 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7869;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0005;THETA=0.0051;AC=1718;AN=2184 GT:DS:GL:BD 0.78663003 1
1 78909552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8787;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78909823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78909853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78909854 rs59987385 G GTAT 18182 PASS INDEL;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0984;AVGPOST=0.9963;RSQ=0.9848;ERATE=0.0007;THETA=0.0008;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 78909905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9889;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78910013 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.575;LDAF=0.0035;AVGPOST=0.9953;RSQ=0.4703;ERATE=0.0011;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78910059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.7297;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78910151 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78910192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6200;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78910268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.9759;AVGPOST=0.9983;RSQ=0.9741;ERATE=0.0004;THETA=0.0015;AC=2132;AN=2184 GT:DS:GL:BD 0.97619045 1
1 78910326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7873;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78910395 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.9490;AVGPOST=0.9970;RSQ=0.9813;ERATE=0.0004;THETA=0.0012;AC=2074;AN=2184 GT:DS:GL:BD 0.94963372 1
1 78910417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.949;LDAF=0.3597;AVGPOST=0.9735;RSQ=0.9629;ERATE=0.0068;THETA=0.0004;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 78910418 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78910458 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9530;AVGPOST=0.9992;RSQ=0.9936;ERATE=0.0003;THETA=0.0009;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 78910489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0044;AVGPOST=0.9955;RSQ=0.6079;ERATE=0.0014;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78910544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9530;AVGPOST=0.9990;RSQ=0.9916;ERATE=0.0004;THETA=0.0002;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 78910685 . T TAAAA 317 PASS INDEL;BAVGPOST=0.998;BRSQ=0.593;LDAF=0.0102;AVGPOST=0.9848;RSQ=0.4106;ERATE=0.0024;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78910805 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.561;LDAF=0.0062;AVGPOST=0.9951;RSQ=0.7203;ERATE=0.0008;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78910814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0031;AVGPOST=0.9973;RSQ=0.6449;ERATE=0.0007;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78910874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.9539;AVGPOST=0.9985;RSQ=0.9895;ERATE=0.0005;THETA=0.0005;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 78910896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4416;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78910909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9531;AVGPOST=0.9992;RSQ=0.9929;ERATE=0.0005;THETA=0.0008;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 78911017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9273;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78911131 . A AAC 5674 PASS INDEL;BAVGPOST=0.722;BRSQ=0.422;LDAF=0.3726;AVGPOST=0.7154;RSQ=0.4892;ERATE=0.0551;THETA=0.0003;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 78911148 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.936;LDAF=0.9468;AVGPOST=0.9814;RSQ=0.8776;ERATE=0.0044;THETA=0.0006;AC=2076;AN=2184 GT:DS:GL:BD 0.95054942 1
1 78911160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9531;AVGPOST=0.9985;RSQ=0.9878;ERATE=0.0004;THETA=0.0007;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 78911207 . GT G 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8338;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78911301 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9588;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78911305 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0078;AVGPOST=0.9981;RSQ=0.9088;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78911308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78911325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8731;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78911344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0805;AVGPOST=0.9987;RSQ=0.9941;ERATE=0.0003;THETA=0.0014;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 78911393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78911503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78911516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78911565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.926;LDAF=0.1773;AVGPOST=0.9771;RSQ=0.9443;ERATE=0.0005;THETA=0.0011;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 78911628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9533;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0022;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 78911634 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9523;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0008;AC=2080;AN=2184 GT:DS:GL:BD 0.95238096 1
1 78911759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9329;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78911808 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7178;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78911901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9527;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0006;AC=2080;AN=2184 GT:DS:GL:BD 0.95238096 1
1 78911911 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9525;AVGPOST=0.9989;RSQ=0.9920;ERATE=0.0004;THETA=0.0007;AC=2080;AN=2184 GT:DS:GL:BD 0.95238096 1
1 78911922 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78912012 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78912043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9469;AVGPOST=0.9990;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=2069;AN=2184 GT:DS:GL:BD 0.94734430 1
1 78912102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0077;AVGPOST=0.9991;RSQ=0.9492;ERATE=0.0004;THETA=0.0016;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78912110 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9767;ERATE=0.0003;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78912141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0062;AVGPOST=0.9984;RSQ=0.9115;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78912148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6194;ERATE=0.0005;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78912165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9532;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 78912367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9533;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 78912428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8246;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78912511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78912567 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0347;AVGPOST=0.9995;RSQ=0.9940;ERATE=0.0003;THETA=0.0010;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78912569 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0814;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 78912587 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78912615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78912653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9515;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0018;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78912677 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0814;AVGPOST=0.9992;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 78912700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8447;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78912728 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6759;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78912760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7865;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78912785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8326;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78912810 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0350;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0004;THETA=0.0018;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78912967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8636;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78913027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9515;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78913028 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0813;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0004;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 78913108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78913121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78913151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78913152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9515;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0004;THETA=0.0007;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78913165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7933;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78913200 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8032;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78913324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78913326 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78913361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9513;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78913476 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78913534 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78913539 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.829;LDAF=0.0180;AVGPOST=0.9924;RSQ=0.8353;ERATE=0.0008;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78913610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.4999;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78913628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9369;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78913633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.9103;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78913678 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9513;AVGPOST=0.9993;RSQ=0.9939;ERATE=0.0004;THETA=0.0022;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78913835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 78913853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.999;LDAF=0.4461;AVGPOST=0.9982;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 78913881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0882;AVGPOST=0.9978;RSQ=0.9892;ERATE=0.0004;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 78913903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9514;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78913920 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9514;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78913936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78914093 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78914135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78914181 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9515;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0006;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78914187 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8351;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78914188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4468;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 78914209 . GACC G 721 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9511;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78914257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9515;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78914263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0172;AVGPOST=0.9977;RSQ=0.9496;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78914281 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9515;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0008;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78914322 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9515;AVGPOST=0.9997;RSQ=0.9973;ERATE=0.0003;THETA=0.0014;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78914354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4811;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 78914358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78914521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78914542 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5550;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78914578 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9514;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0004;THETA=0.0007;AC=2078;AN=2184 GT:DS:GL:BD 0.95146519 1
1 78914736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78914826 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78914868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78914928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5815;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0005;THETA=0.0061;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 78914945 rs67661744 CA C 32876 PASS INDEL;BAVGPOST=0.974;BRSQ=0.957;LDAF=0.3902;AVGPOST=0.9779;RSQ=0.9717;ERATE=0.0004;THETA=0.0005;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 78914987 . A AAT 16330 PASS INDEL;BAVGPOST=0.971;BRSQ=0.950;LDAF=0.3874;AVGPOST=0.9759;RSQ=0.9681;ERATE=0.0006;THETA=0.0003;AC=842;AN=2184 GT:DS:GL:BD 0.38553113 0
1 78914990 rs67565795 AG A 32805 PASS INDEL;BAVGPOST=0.974;BRSQ=0.957;LDAF=0.3900;AVGPOST=0.9772;RSQ=0.9708;ERATE=0.0005;THETA=0.0015;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 78914992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78915091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4694;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78915099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7421;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78915124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.888;LDAF=0.0458;AVGPOST=0.9897;RSQ=0.9136;ERATE=0.0005;THETA=0.0032;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 78915133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0031;AVGPOST=0.9958;RSQ=0.4673;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78915301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5236;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78915304 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9394;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78915356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.910;LDAF=0.0535;AVGPOST=0.9914;RSQ=0.9309;ERATE=0.0019;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 78915381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0166;AVGPOST=0.9980;RSQ=0.9456;ERATE=0.0004;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78915405 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.563;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4154;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78915409 . T TA 111 PASS INDEL;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.5410;ERATE=0.0007;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78915409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5391;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78915427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0043;AVGPOST=0.9951;RSQ=0.5349;ERATE=0.0010;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78915456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.731;LDAF=0.0106;AVGPOST=0.9942;RSQ=0.7828;ERATE=0.0008;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78915511 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8260;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78915566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0123;AVGPOST=0.9994;RSQ=0.9801;ERATE=0.0003;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78915581 . AAC A 123 PASS INDEL;BAVGPOST=0.987;BRSQ=0.647;LDAF=0.0350;AVGPOST=0.9651;RSQ=0.5929;ERATE=0.0139;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78915600 . AG A 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.4478;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78915709 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6996;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78915723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78915754 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8912;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78915813 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78915886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78915919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5872;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78915923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7012;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78915956 rs5781981 AAC A 52000 PASS INDEL;BAVGPOST=0.901;BRSQ=0.692;LDAF=0.7922;AVGPOST=0.8809;RSQ=0.7126;ERATE=0.0210;THETA=0.0004;AC=1741;AN=2184 GT:DS:GL:BD 0.79716116 1
1 78916073 . AC A 791 PASS INDEL;BAVGPOST=0.661;BRSQ=0.371;LDAF=0.3322;AVGPOST=0.6971;RSQ=0.4804;ERATE=0.0346;THETA=0.0005;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 78916076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78916309 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78916324 . TGAA T 161 PASS INDEL;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0045;AVGPOST=0.9938;RSQ=0.4166;ERATE=0.0021;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78916417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78916517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5841;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78916576 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0030;AVGPOST=0.9996;RSQ=0.9565;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78916584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6560;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78916621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8801;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78916764 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0099;AVGPOST=0.9967;RSQ=0.8604;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78916848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0179;AVGPOST=0.9984;RSQ=0.9607;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 78916885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78916888 . TTAA T 1584 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9398;ERATE=0.0005;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78916892 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78917016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8580;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78917092 . TG T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8291;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78917389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78917487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78917621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78917676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78917827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8919;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78917938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9458;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78918012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8529;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78918069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0173;AVGPOST=0.9986;RSQ=0.9653;ERATE=0.0011;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78918143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78918322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78918632 . TTTC T 2156 PASS INDEL;BAVGPOST=0.942;BRSQ=0.662;LDAF=0.1073;AVGPOST=0.9244;RSQ=0.7073;ERATE=0.0082;THETA=0.0003;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 78918662 . C CT 24 PASS INDEL;BAVGPOST=0.968;BRSQ=0.384;LDAF=0.0338;AVGPOST=0.9525;RSQ=0.4483;ERATE=0.0039;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78918668 . TC T 7948 PASS INDEL;BAVGPOST=0.921;BRSQ=0.749;LDAF=0.2096;AVGPOST=0.8472;RSQ=0.6389;ERATE=0.0347;THETA=0.0004;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 78918670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5879;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78918721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78918821 . T TA 127 PASS INDEL;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0035;AVGPOST=0.9958;RSQ=0.4998;ERATE=0.0013;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78918831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8032;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78919086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7301;ERATE=0.0012;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78919181 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0709;AVGPOST=0.9950;RSQ=0.9690;ERATE=0.0022;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 78919246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8805;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78919293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78919405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0058;AVGPOST=0.9961;RSQ=0.7343;ERATE=0.0005;THETA=0.0052;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78919436 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0279;AVGPOST=0.9989;RSQ=0.9853;ERATE=0.0003;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 78919504 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9986;RSQ=0.8871;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78919542 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78919581 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.9816;AVGPOST=0.9947;RSQ=0.9057;ERATE=0.0004;THETA=0.0006;AC=2145;AN=2184 GT:DS:GL:BD 0.98214287 1
1 78919644 . CAT C 603 PASS INDEL;BAVGPOST=0.960;BRSQ=0.506;LDAF=0.0722;AVGPOST=0.9087;RSQ=0.4292;ERATE=0.0187;THETA=0.0009;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 78919718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.875;LDAF=0.0535;AVGPOST=0.9802;RSQ=0.8473;ERATE=0.0030;THETA=0.0004;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 78919730 . C CT 12 PASS INDEL;BAVGPOST=0.998;BRSQ=0.826;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5046;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78919772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5120;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78919936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.793;LDAF=0.0117;AVGPOST=0.9954;RSQ=0.8150;ERATE=0.0010;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78920006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0057;AVGPOST=0.9989;RSQ=0.9145;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78920008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0425;AVGPOST=0.9987;RSQ=0.9870;ERATE=0.0004;THETA=0.0011;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 78920026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.952;LDAF=0.2442;AVGPOST=0.9839;RSQ=0.9701;ERATE=0.0004;THETA=0.0048;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 78920088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0022;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 78920238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8839;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78920327 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3452;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0007;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 78920349 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78920394 . TA T 135 PASS INDEL;BAVGPOST=0.965;BRSQ=0.440;LDAF=0.0375;AVGPOST=0.9547;RSQ=0.5167;ERATE=0.0068;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78920417 rs59914166 AT A 20766 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3469;AVGPOST=0.9939;RSQ=0.9892;ERATE=0.0013;THETA=0.0007;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 78920418 . TG T 315 PASS INDEL;BAVGPOST=0.938;BRSQ=0.491;LDAF=0.0741;AVGPOST=0.9200;RSQ=0.5585;ERATE=0.0104;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 78920426 rs35549862 T TATG 51707 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3456;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0006;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 78920480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3455;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0005;THETA=0.0031;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 78920540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78920572 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3343;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0005;THETA=0.0006;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 78920692 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5485;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78920707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0250;AVGPOST=0.9954;RSQ=0.9300;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78920829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3329;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0005;THETA=0.0009;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 78920862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6231;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78920885 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3295;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0009;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 78920942 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78921000 . TA T 9157 PASS INDEL;BAVGPOST=0.978;BRSQ=0.954;LDAF=0.3158;AVGPOST=0.9675;RSQ=0.9457;ERATE=0.0051;THETA=0.0003;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 78921035 rs75472850 AT A 36410 PASS INDEL;BAVGPOST=0.986;BRSQ=0.972;LDAF=0.3272;AVGPOST=0.9957;RSQ=0.9916;ERATE=0.0006;THETA=0.0025;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 78921036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.943;LDAF=0.0331;AVGPOST=0.9956;RSQ=0.9515;ERATE=0.0004;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78921062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78921063 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.6987;ERATE=0.0006;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78921194 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0367;AVGPOST=0.9983;RSQ=0.9817;ERATE=0.0004;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 78921213 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6507;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78921218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3290;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0005;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 78921336 . TAC T 289 PASS INDEL;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7504;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78921380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3294;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0007;THETA=0.0006;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 78921399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0071;AVGPOST=0.9982;RSQ=0.8879;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78921440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3307;AVGPOST=0.9951;RSQ=0.9913;ERATE=0.0009;THETA=0.0010;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 78921582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8284;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78921839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3298;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 78921862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3298;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 78921920 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7660;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78921992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2885;AVGPOST=0.9977;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 78922045 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2894;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0009;AC=632;AN=2184 GT:DS:GL:BD 0.28937730 0
1 78922169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7384;ERATE=0.0005;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78922181 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0121;AVGPOST=0.9994;RSQ=0.9766;ERATE=0.0004;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78922187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0230;AVGPOST=0.9994;RSQ=0.9889;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78922219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.859;LDAF=0.0067;AVGPOST=0.9988;RSQ=0.9251;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78922226 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9336;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78922242 . ACT A 315 PASS INDEL;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9209;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78922273 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78922279 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3302;AVGPOST=0.9958;RSQ=0.9923;ERATE=0.0006;THETA=0.0011;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 78922291 . GC G 114 PASS INDEL;BAVGPOST=0.945;BRSQ=0.341;LDAF=0.0470;AVGPOST=0.9426;RSQ=0.5215;ERATE=0.0046;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78922298 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.7921;ERATE=0.0007;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78922306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.3233;AVGPOST=0.9889;RSQ=0.9824;ERATE=0.0004;THETA=0.0004;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 78922373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.970;LDAF=0.3644;AVGPOST=0.9888;RSQ=0.9838;ERATE=0.0003;THETA=0.0004;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 78922375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.968;LDAF=0.3229;AVGPOST=0.9879;RSQ=0.9804;ERATE=0.0006;THETA=0.0035;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 78922384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7543;ERATE=0.0003;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78922540 . A AG 98 PASS INDEL;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0027;AVGPOST=0.9968;RSQ=0.5865;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78922582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3720;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0003;THETA=0.0019;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 78922592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8819;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78922609 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8024;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78922679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3308;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 78922721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7134;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78922737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4969;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78922785 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0227;AVGPOST=0.9969;RSQ=0.9484;ERATE=0.0005;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78922823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0059;AVGPOST=0.9971;RSQ=0.7998;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78922847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6307;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78923023 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.3303;AVGPOST=0.9950;RSQ=0.9907;ERATE=0.0005;THETA=0.0003;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 78923040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.3304;AVGPOST=0.9962;RSQ=0.9929;ERATE=0.0005;THETA=0.0011;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 78923047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6695;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78923056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0065;AVGPOST=0.9963;RSQ=0.7886;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78923088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3416;AVGPOST=0.9956;RSQ=0.9918;ERATE=0.0010;THETA=0.0006;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 78923199 rs61200135 A AT 190 PASS INDEL;BAVGPOST=0.998;BRSQ=0.855;LDAF=0.0070;AVGPOST=0.9959;RSQ=0.7868;ERATE=0.0009;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78923223 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9654;ERATE=0.0004;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78923253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.922;LDAF=0.0215;AVGPOST=0.9932;RSQ=0.8907;ERATE=0.0004;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78923254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6624;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78923260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9330;ERATE=0.0004;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78923352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.3381;AVGPOST=0.9919;RSQ=0.9863;ERATE=0.0008;THETA=0.0004;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 78923453 . C CA 4475 PASS INDEL;BAVGPOST=0.972;BRSQ=0.944;LDAF=0.3296;AVGPOST=0.9756;RSQ=0.9594;ERATE=0.0013;THETA=0.0003;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 78923471 . A AG 28575 PASS INDEL;BAVGPOST=0.973;BRSQ=0.952;LDAF=0.3646;AVGPOST=0.9846;RSQ=0.9767;ERATE=0.0006;THETA=0.0005;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 78923474 . G GC 11043 PASS INDEL;BAVGPOST=0.974;BRSQ=0.953;LDAF=0.3628;AVGPOST=0.9843;RSQ=0.9760;ERATE=0.0006;THETA=0.0015;AC=797;AN=2184 GT:DS:GL:BD 0.36492673 0
1 78923475 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.607;LDAF=0.0223;AVGPOST=0.9773;RSQ=0.6157;ERATE=0.0077;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78923664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3725;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=813;AN=2184 GT:DS:GL:BD 0.37225273 0
1 78923791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7574;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78923797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78923905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78924024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6321;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78924042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.975;LDAF=0.0437;AVGPOST=0.9984;RSQ=0.9850;ERATE=0.0004;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 78924059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5293;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78924095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78924100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7855;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78924141 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0086;AVGPOST=0.9992;RSQ=0.9580;ERATE=0.0004;THETA=0.0019;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78924161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2650;AVGPOST=0.9967;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 78924213 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78924249 . TC T 2305 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0210;AVGPOST=0.9989;RSQ=0.9790;ERATE=0.0004;THETA=0.0008;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78924287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5952;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78924294 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0078;AVGPOST=0.9981;RSQ=0.8996;ERATE=0.0005;THETA=0.0029;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78924318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6852;ERATE=0.0004;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78924424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9994;RSQ=0.9668;ERATE=0.0003;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78924425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2938;AVGPOST=0.9961;RSQ=0.9931;ERATE=0.0003;THETA=0.0011;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 78924427 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0139;AVGPOST=0.9982;RSQ=0.9602;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78924433 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.2875;AVGPOST=0.9851;RSQ=0.9747;ERATE=0.0007;THETA=0.0013;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 78924474 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5756;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78924482 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2957;AVGPOST=0.9930;RSQ=0.9880;ERATE=0.0006;THETA=0.0052;AC=643;AN=2184 GT:DS:GL:BD 0.29441392 0
1 78924508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78924512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2622;AVGPOST=0.9933;RSQ=0.9882;ERATE=0.0004;THETA=0.0014;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 78924527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0088;AVGPOST=0.9975;RSQ=0.8973;ERATE=0.0006;THETA=0.0051;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78924528 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6418;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78924550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0379;AVGPOST=0.9985;RSQ=0.9831;ERATE=0.0004;THETA=0.0086;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 78924640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0372;AVGPOST=0.9984;RSQ=0.9825;ERATE=0.0003;THETA=0.0064;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 78924663 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78924754 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9697;ERATE=0.0004;THETA=0.0195;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78924866 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0115;AVGPOST=0.9986;RSQ=0.9504;ERATE=0.0003;THETA=0.0053;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78924962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8600;ERATE=0.0004;THETA=0.0138;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78925041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78925190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3211;AVGPOST=0.9956;RSQ=0.9932;ERATE=0.0003;THETA=0.0010;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 78925445 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.871;LDAF=0.0134;AVGPOST=0.9955;RSQ=0.8589;ERATE=0.0005;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78925503 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78925696 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7625;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78925751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9249;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78925837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3491;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0004;THETA=0.0009;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 78925914 . AAAT A 96 PASS INDEL;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8351;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78925916 . ATAAT A 674 PASS INDEL;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.7922;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78925918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.4578;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78925981 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8807;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78926168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78926333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78926335 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0201;AVGPOST=0.9990;RSQ=0.9810;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78926375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0340;AVGPOST=0.9987;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 78926390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.9879;AVGPOST=0.9972;RSQ=0.9024;ERATE=0.0007;THETA=0.0004;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 78926415 . TGC T 62 PASS INDEL;BAVGPOST=0.986;BRSQ=0.333;LDAF=0.0140;AVGPOST=0.9788;RSQ=0.3926;ERATE=0.0046;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78926463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4413;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78926509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78926577 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78926648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3179;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0005;THETA=0.0007;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 78926653 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0063;AVGPOST=0.9981;RSQ=0.8784;ERATE=0.0006;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78926751 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2062;AVGPOST=0.9981;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 78926760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0157;AVGPOST=0.9987;RSQ=0.9646;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78926802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.875;LDAF=0.0090;AVGPOST=0.9981;RSQ=0.9104;ERATE=0.0006;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78926851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6386;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78926867 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78926931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.967;LDAF=0.0745;AVGPOST=0.9963;RSQ=0.9799;ERATE=0.0006;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 78926972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8365;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78927007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5739;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0006;THETA=0.0003;AC=1253;AN=2184 GT:DS:GL:BD 0.57371795 1
1 78927043 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0201;AVGPOST=0.9994;RSQ=0.9876;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78927107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3178;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0006;THETA=0.0003;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 78927146 . AGC A 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7445;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78927161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0321;AVGPOST=0.9985;RSQ=0.9814;ERATE=0.0003;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78927172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8845;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78927232 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3175;AVGPOST=0.9961;RSQ=0.9938;ERATE=0.0009;THETA=0.0007;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 78927238 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78927260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2234;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 78927267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.9894;AVGPOST=0.9995;RSQ=0.9753;ERATE=0.0003;THETA=0.0006;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 78927369 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78927404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0028;AVGPOST=0.9978;RSQ=0.6456;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78927411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0075;AVGPOST=0.9968;RSQ=0.8335;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78927441 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5837;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78927452 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6896;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78927566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4903;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78927593 rs34891290 AC A 4846 PASS INDEL;BAVGPOST=0.860;BRSQ=0.714;LDAF=0.2685;AVGPOST=0.8836;RSQ=0.7901;ERATE=0.0095;THETA=0.0005;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 78927707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2247;AVGPOST=0.9936;RSQ=0.9840;ERATE=0.0008;THETA=0.0007;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 78927728 rs66922405 GT G 2428 PASS INDEL;BAVGPOST=0.712;BRSQ=0.121;LDAF=0.7914;AVGPOST=0.7494;RSQ=0.3801;ERATE=0.0133;THETA=0.0004;AC=1911;AN=2184 GT:DS:GL:BD 0.87500000 1
1 78927834 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.806;BRSQ=0.692;LDAF=0.5014;AVGPOST=0.8649;RSQ=0.8091;ERATE=0.0051;THETA=0.0003;AC=1156;AN=2184 GT:DS:GL:BD 0.52930403 1
1 78927858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.986;LDAF=0.3873;AVGPOST=0.9911;RSQ=0.9877;ERATE=0.0006;THETA=0.0037;AC=848;AN=2184 GT:DS:GL:BD 0.38827839 0
1 78927915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4447;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78927967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4997;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78928013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78928019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78928052 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6900;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78928170 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78928178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0155;AVGPOST=0.9989;RSQ=0.9728;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78928294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78928302 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5253;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78928328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4123;AVGPOST=0.9940;RSQ=0.9900;ERATE=0.0014;THETA=0.0003;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 78928367 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0042;AVGPOST=0.9972;RSQ=0.7297;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78928410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78928452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7878;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78928539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0242;AVGPOST=0.9957;RSQ=0.9365;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78928650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78928701 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5697;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78928731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7315;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78928765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5980;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78928786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78928927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7348;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78929077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0340;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 78929169 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9895;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0006;AC=2161;AN=2184 GT:DS:GL:BD 0.98946887 1
1 78929199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6644;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78929252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7388;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78929329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4132;AVGPOST=0.9980;RSQ=0.9967;ERATE=0.0006;THETA=0.0027;AC=903;AN=2184 GT:DS:GL:BD 0.41346154 0
1 78929354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78929412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78929477 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2737;AVGPOST=0.9951;RSQ=0.9909;ERATE=0.0006;THETA=0.0007;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 78929518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78929614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78929733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78929737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78929764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6623;ERATE=0.0015;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78929773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8080;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78929774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78929846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78929854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78929862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5100;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78929940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0082;AVGPOST=0.9985;RSQ=0.9189;ERATE=0.0008;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78930049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78930124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6094;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78930343 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78930344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.865;LDAF=0.0184;AVGPOST=0.9956;RSQ=0.9066;ERATE=0.0005;THETA=0.0012;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78930430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78930431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78930486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7066;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78930619 . C CA 1308 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9800;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78930667 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6337;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78930707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9603;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78930783 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78930788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78930846 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9008;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78930951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78930957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6919;ERATE=0.0007;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78930968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0109;AVGPOST=0.9980;RSQ=0.9278;ERATE=0.0004;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78931461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8678;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78931620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.974;LDAF=0.0643;AVGPOST=0.9932;RSQ=0.9624;ERATE=0.0007;THETA=0.0013;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 78931648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.964;LDAF=0.3235;AVGPOST=0.9752;RSQ=0.9646;ERATE=0.0013;THETA=0.0023;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 78931654 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78931695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.7754;ERATE=0.0004;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78931708 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.873;LDAF=0.3068;AVGPOST=0.9468;RSQ=0.9230;ERATE=0.0016;THETA=0.0005;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 78931853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.882;LDAF=0.2600;AVGPOST=0.9672;RSQ=0.9408;ERATE=0.0007;THETA=0.0007;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 78931884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7236;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78932058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78932066 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78932260 . GC G 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4603;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78932315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78932340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0340;AVGPOST=0.9992;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 78932361 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9841;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78932411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78932448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78932478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0182;AVGPOST=0.9976;RSQ=0.9447;ERATE=0.0003;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78932573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78932665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0192;AVGPOST=0.9979;RSQ=0.9579;ERATE=0.0004;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78932726 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78932981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78933028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78933081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.761;LDAF=0.0051;AVGPOST=0.9975;RSQ=0.8116;ERATE=0.0006;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78933153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.919;LDAF=0.0190;AVGPOST=0.9941;RSQ=0.8797;ERATE=0.0006;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78933217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78933251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8284;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78933257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0075;AVGPOST=0.9991;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78933271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7126;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78933318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.736;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78933333 rs34453935 T TA 22808 PASS INDEL;BAVGPOST=0.965;BRSQ=0.940;LDAF=0.3316;AVGPOST=0.9523;RSQ=0.9273;ERATE=0.0047;THETA=0.0007;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 78933422 . AG A 85 PASS INDEL;BAVGPOST=0.996;BRSQ=0.686;LDAF=0.0084;AVGPOST=0.9941;RSQ=0.7091;ERATE=0.0018;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78933460 rs11386012 G GA 63 PASS INDEL;BAVGPOST=0.991;BRSQ=0.718;LDAF=0.0234;AVGPOST=0.9736;RSQ=0.5392;ERATE=0.0047;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78933503 . A AAG 953 PASS INDEL;BAVGPOST=0.971;BRSQ=0.713;LDAF=0.0595;AVGPOST=0.9542;RSQ=0.6680;ERATE=0.0051;THETA=0.0008;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 78933539 rs10577499 AAG A 3156 PASS INDEL;BAVGPOST=0.957;BRSQ=0.714;LDAF=0.1160;AVGPOST=0.9169;RSQ=0.6464;ERATE=0.0202;THETA=0.0010;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 78933540 rs72207990 GAA G 18267 PASS INDEL;BAVGPOST=0.952;BRSQ=0.902;LDAF=0.2926;AVGPOST=0.9222;RSQ=0.8702;ERATE=0.0169;THETA=0.0009;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 78933575 rs72207990 A AAG 19345 PASS INDEL;BAVGPOST=0.927;BRSQ=0.870;LDAF=0.3223;AVGPOST=0.8706;RSQ=0.8026;ERATE=0.0281;THETA=0.0004;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 78933577 . CGAAG C 141 PASS INDEL;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0082;AVGPOST=0.9904;RSQ=0.5481;ERATE=0.0022;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78933602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7824;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78933723 . AT A 35 PASS INDEL;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4488;ERATE=0.0005;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78933824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78933909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78933966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78933992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78933996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9823;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78934024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78934134 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78934172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0164;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78934307 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0022;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78934385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78934401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78934412 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78934453 . AC A 1747 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9700;ERATE=0.0004;THETA=0.0047;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78934474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0202;AVGPOST=0.9978;RSQ=0.9594;ERATE=0.0003;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 78934569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78934622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9405;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78934669 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9311;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78934671 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7530;AVGPOST=0.9921;RSQ=0.9844;ERATE=0.0005;THETA=0.0004;AC=1646;AN=2184 GT:DS:GL:BD 0.75366300 1
1 78934795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6514;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78934806 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9561;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78934867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78934907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78934918 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78934935 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78934990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8281;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78934997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9750;ERATE=0.0003;THETA=0.0033;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78935186 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0190;AVGPOST=0.9984;RSQ=0.9714;ERATE=0.0004;THETA=0.0015;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 78935190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9996;RSQ=0.9816;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 78935237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6000;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78935249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5938;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78935256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9105;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78935300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3481;AVGPOST=0.9948;RSQ=0.9911;ERATE=0.0007;THETA=0.0007;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 78935303 . C CAAG 27518 PASS INDEL;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.3423;AVGPOST=0.9849;RSQ=0.9761;ERATE=0.0009;THETA=0.0007;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 78935336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.3472;AVGPOST=0.9924;RSQ=0.9878;ERATE=0.0016;THETA=0.0013;AC=760;AN=2184 GT:DS:GL:BD 0.34798536 0
1 78935348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78935403 . G GA 121 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7865;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78935415 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9777;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78935471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0641;AVGPOST=0.9987;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 78935500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78935531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5252;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78935532 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8843;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=1932;AN=2184 GT:DS:GL:BD 0.88461536 1
1 78935543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0077;AVGPOST=0.9966;RSQ=0.8274;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78935563 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.939;LDAF=0.7694;AVGPOST=0.9595;RSQ=0.9132;ERATE=0.0057;THETA=0.0003;AC=1698;AN=2184 GT:DS:GL:BD 0.77747256 1
1 78935600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0066;AVGPOST=0.9969;RSQ=0.8021;ERATE=0.0014;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78935606 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4739;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78935618 rs113188272 AC A 21252 PASS INDEL;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.3476;AVGPOST=0.9946;RSQ=0.9905;ERATE=0.0007;THETA=0.0005;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 78935647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.3490;AVGPOST=0.9920;RSQ=0.9871;ERATE=0.0006;THETA=0.0003;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 78935801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6085;ERATE=0.0008;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78935864 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78935926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78935930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9153;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78935936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0063;AVGPOST=0.9990;RSQ=0.9377;ERATE=0.0005;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78936032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9436;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78936104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78936113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0601;AVGPOST=0.9992;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 78936114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4595;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 78936243 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6919;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78936283 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78936394 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.8853;AVGPOST=0.9990;RSQ=0.9958;ERATE=0.0004;THETA=0.0003;AC=1934;AN=2184 GT:DS:GL:BD 0.88553113 1
1 78936400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1811;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 78936430 rs112700091 T TC 22243 PASS INDEL;BAVGPOST=0.922;BRSQ=0.872;LDAF=0.4218;AVGPOST=0.9495;RSQ=0.9263;ERATE=0.0030;THETA=0.0003;AC=936;AN=2184 GT:DS:GL:BD 0.42857143 0
1 78936462 . C CT 2185 PASS INDEL;BAVGPOST=0.823;BRSQ=0.654;LDAF=0.3291;AVGPOST=0.8317;RSQ=0.7196;ERATE=0.0150;THETA=0.0004;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 78936463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.888;LDAF=0.5453;AVGPOST=0.9323;RSQ=0.9008;ERATE=0.0072;THETA=0.0005;AC=1213;AN=2184 GT:DS:GL:BD 0.55540293 1
1 78936480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.897;LDAF=0.3341;AVGPOST=0.9557;RSQ=0.9322;ERATE=0.0008;THETA=0.0003;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 78936512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.906;LDAF=0.4080;AVGPOST=0.9613;RSQ=0.9455;ERATE=0.0008;THETA=0.0002;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 78936513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5684;ERATE=0.0007;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78936602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.969;LDAF=0.2729;AVGPOST=0.9912;RSQ=0.9847;ERATE=0.0006;THETA=0.0005;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 78936654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.977;LDAF=0.4550;AVGPOST=0.9913;RSQ=0.9864;ERATE=0.0012;THETA=0.0010;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 78936692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.643;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6212;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78936704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4594;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0007;AC=1004;AN=2184 GT:DS:GL:BD 0.45970696 0
1 78936763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0058;AVGPOST=0.9969;RSQ=0.7673;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78936803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78936820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9788;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78936865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4600;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0006;THETA=0.0009;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 78936868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0244;AVGPOST=0.9987;RSQ=0.9804;ERATE=0.0003;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78936869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78936904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78936915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8421;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78936937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0960;AVGPOST=0.9974;RSQ=0.9887;ERATE=0.0003;THETA=0.0010;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 78936942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8851;AVGPOST=0.9967;RSQ=0.9855;ERATE=0.0006;THETA=0.0026;AC=1934;AN=2184 GT:DS:GL:BD 0.88553113 1
1 78937078 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0041;AVGPOST=0.9978;RSQ=0.7852;ERATE=0.0012;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78937092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0098;AVGPOST=0.9991;RSQ=0.9669;ERATE=0.0004;THETA=0.0014;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78937101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5411;ERATE=0.0004;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78937267 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1819;AVGPOST=0.9958;RSQ=0.9892;ERATE=0.0004;THETA=0.0017;AC=396;AN=2184 GT:DS:GL:BD 0.18131869 0
1 78937560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5623;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78937692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8372;ERATE=0.0011;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78937770 . TA T 6 PASS INDEL;BAVGPOST=0.998;BRSQ=0.491;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0004;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78937838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4814;ERATE=0.0004;THETA=0.0127;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78937911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78937945 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0121;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78938029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7014;ERATE=0.0004;THETA=0.0076;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78938104 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9987;RSQ=0.4680;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78938195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7271;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78938340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0041;AVGPOST=0.9961;RSQ=0.6003;ERATE=0.0016;THETA=0.0127;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78938351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5093;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78938427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6760;ERATE=0.0005;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78938522 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78938567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78938569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.9093;ERATE=0.0003;THETA=0.0055;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78938682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.944;LDAF=0.4309;AVGPOST=0.9606;RSQ=0.9413;ERATE=0.0096;THETA=0.0218;AC=931;AN=2184 GT:DS:GL:BD 0.42628205 0
1 78938852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.938;LDAF=0.0554;AVGPOST=0.9904;RSQ=0.9338;ERATE=0.0005;THETA=0.0089;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 78939019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6687;ERATE=0.0003;THETA=0.0195;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78939092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8430;ERATE=0.0004;THETA=0.0168;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78939099 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.867;LDAF=0.0168;AVGPOST=0.9969;RSQ=0.9213;ERATE=0.0007;THETA=0.0141;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78939165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5336;ERATE=0.0005;THETA=0.0293;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78939245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.802;LDAF=0.0710;AVGPOST=0.9662;RSQ=0.8054;ERATE=0.0015;THETA=0.0114;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 78939388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0068;AVGPOST=0.9972;RSQ=0.8311;ERATE=0.0005;THETA=0.0070;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78939412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.4315;ERATE=0.0005;THETA=0.0170;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78939423 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0139;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78939471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0039;AVGPOST=0.9974;RSQ=0.7355;ERATE=0.0004;THETA=0.0130;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78939551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.975;LDAF=0.6656;AVGPOST=0.9755;RSQ=0.9649;ERATE=0.0004;THETA=0.0015;AC=1456;AN=2184 GT:DS:GL:BD 0.66666669 1
1 78939638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0048;AVGPOST=0.9967;RSQ=0.7281;ERATE=0.0004;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78939712 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78939724 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78939755 . GT G 958 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9978;RSQ=0.9226;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78939763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0004;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78939876 . TTC T 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0150;AVGPOST=0.9981;RSQ=0.9502;ERATE=0.0004;THETA=0.0040;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78939877 rs71796091 TCTC T 2562 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0150;AVGPOST=0.9982;RSQ=0.9546;ERATE=0.0003;THETA=0.0080;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78939878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78939945 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6697;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78939972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8476;ERATE=0.0003;THETA=0.0033;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78939993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6828;ERATE=0.0003;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78940034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78940094 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0753;AVGPOST=0.9979;RSQ=0.9897;ERATE=0.0004;THETA=0.0009;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 78940108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0756;AVGPOST=0.9984;RSQ=0.9917;ERATE=0.0003;THETA=0.0027;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 78940116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0633;AVGPOST=0.9983;RSQ=0.9898;ERATE=0.0003;THETA=0.0015;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 78940141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5422;AVGPOST=0.9920;RSQ=0.9893;ERATE=0.0004;THETA=0.0034;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 78940166 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1130;AVGPOST=0.9950;RSQ=0.9815;ERATE=0.0004;THETA=0.0005;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 78940178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0759;AVGPOST=0.9990;RSQ=0.9952;ERATE=0.0003;THETA=0.0010;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 78940210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0199;AVGPOST=0.9963;RSQ=0.9309;ERATE=0.0004;THETA=0.0009;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 78940265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0058;AVGPOST=0.9968;RSQ=0.7750;ERATE=0.0004;THETA=0.0023;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78940313 . G GTCTA 172 PASS INDEL;BAVGPOST=0.990;BRSQ=0.458;LDAF=0.0110;AVGPOST=0.9865;RSQ=0.5387;ERATE=0.0016;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78940377 . T TG 322 PASS INDEL;BAVGPOST=0.979;BRSQ=0.578;LDAF=0.0253;AVGPOST=0.9822;RSQ=0.7394;ERATE=0.0006;THETA=0.0009;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78940426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.894;BRSQ=0.550;LDAF=0.1461;AVGPOST=0.8996;RSQ=0.7113;ERATE=0.0039;THETA=0.0073;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 78940708 . C CT 275 PASS INDEL;BAVGPOST=0.898;BRSQ=0.251;LDAF=0.1459;AVGPOST=0.7851;RSQ=0.2927;ERATE=0.0257;THETA=0.0051;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 78940722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.785;LDAF=0.9438;AVGPOST=0.9808;RSQ=0.8727;ERATE=0.0016;THETA=0.0008;AC=2074;AN=2184 GT:DS:GL:BD 0.94963372 1
1 78940797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.543;LDAF=0.0510;AVGPOST=0.9501;RSQ=0.5952;ERATE=0.0066;THETA=0.0008;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 78940868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1580;AVGPOST=0.9895;RSQ=0.9748;ERATE=0.0009;THETA=0.0030;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 78940914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0244;AVGPOST=0.9976;RSQ=0.9616;ERATE=0.0004;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78940923 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.915;BRSQ=0.815;LDAF=0.7331;AVGPOST=0.9584;RSQ=0.9298;ERATE=0.0016;THETA=0.0022;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 78940966 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4368;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78941061 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1900;AVGPOST=0.9814;RSQ=0.9613;ERATE=0.0005;THETA=0.0032;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 78941098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.628;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4374;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78941112 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.911;BRSQ=0.592;LDAF=0.1144;AVGPOST=0.9224;RSQ=0.7420;ERATE=0.0029;THETA=0.0008;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 78941130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.9005;ERATE=0.0005;THETA=0.0056;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78941149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.541;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3226;ERATE=0.0008;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78941274 . T TGG 1400 PASS INDEL;BAVGPOST=0.810;BRSQ=0.502;LDAF=0.2832;AVGPOST=0.7902;RSQ=0.5670;ERATE=0.0255;THETA=0.0002;AC=550;AN=2184 GT:DS:GL:BD 0.25183150 0
1 78941327 . T TGTGG 8486 PASS INDEL;BAVGPOST=0.760;BRSQ=0.464;LDAF=0.3042;AVGPOST=0.7866;RSQ=0.5867;ERATE=0.0203;THETA=0.0007;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 78941333 . TC T 398 PASS INDEL;BAVGPOST=0.765;BRSQ=0.259;LDAF=0.2173;AVGPOST=0.7631;RSQ=0.4549;ERATE=0.0197;THETA=0.0005;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 78941339 . CT C 490 PASS INDEL;BAVGPOST=0.517;BRSQ=0.148;LDAF=0.3512;AVGPOST=0.6369;RSQ=0.3300;ERATE=0.0112;THETA=0.0015;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 78941340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.893;BRSQ=0.699;LDAF=0.2183;AVGPOST=0.9446;RSQ=0.8829;ERATE=0.0031;THETA=0.0008;AC=482;AN=2184 GT:DS:GL:BD 0.22069597 0
1 78941371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0050;AVGPOST=0.9925;RSQ=0.3983;ERATE=0.0009;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78941394 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.1898;AVGPOST=0.9830;RSQ=0.9622;ERATE=0.0010;THETA=0.0032;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 78941511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.980;LDAF=0.1908;AVGPOST=0.9862;RSQ=0.9701;ERATE=0.0008;THETA=0.0017;AC=415;AN=2184 GT:DS:GL:BD 0.19001831 0
1 78941541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.1755;AVGPOST=0.9912;RSQ=0.9771;ERATE=0.0004;THETA=0.0080;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 78941569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.930;LDAF=0.2186;AVGPOST=0.9739;RSQ=0.9454;ERATE=0.0013;THETA=0.0005;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 78941586 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.485;LDAF=0.0070;AVGPOST=0.9926;RSQ=0.5917;ERATE=0.0006;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78941597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.908;LDAF=0.1915;AVGPOST=0.9707;RSQ=0.9344;ERATE=0.0015;THETA=0.0016;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 78941598 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.546;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4689;ERATE=0.0008;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78941624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.625;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6259;ERATE=0.0006;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78941657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4410;ERATE=0.0005;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78941707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.893;LDAF=0.1968;AVGPOST=0.9724;RSQ=0.9386;ERATE=0.0008;THETA=0.0023;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 78941749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1584;AVGPOST=0.9815;RSQ=0.9578;ERATE=0.0009;THETA=0.0005;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 78941779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.7785;ERATE=0.0004;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78941809 . A AAT 12537 PASS INDEL;BAVGPOST=0.824;BRSQ=0.649;LDAF=0.3647;AVGPOST=0.8198;RSQ=0.7026;ERATE=0.0206;THETA=0.0004;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 78941843 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9973;AVGPOST=0.9958;RSQ=0.3646;ERATE=0.0006;THETA=0.0031;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 78941968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.2261;AVGPOST=0.9897;RSQ=0.9790;ERATE=0.0004;THETA=0.0007;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 78942192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.650;LDAF=0.0101;AVGPOST=0.9918;RSQ=0.6909;ERATE=0.0005;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78942243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.5399;AVGPOST=0.9905;RSQ=0.9872;ERATE=0.0005;THETA=0.0023;AC=1181;AN=2184 GT:DS:GL:BD 0.54075092 1
1 78942244 . GC G 198 PASS INDEL;BAVGPOST=0.972;BRSQ=0.611;LDAF=0.0318;AVGPOST=0.9798;RSQ=0.7621;ERATE=0.0007;THETA=0.0015;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 78942298 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.974;LDAF=0.4059;AVGPOST=0.9862;RSQ=0.9801;ERATE=0.0008;THETA=0.0033;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 78942302 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.722;LDAF=0.0343;AVGPOST=0.9813;RSQ=0.7962;ERATE=0.0005;THETA=0.0017;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78942324 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4105;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78942332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.870;LDAF=0.0420;AVGPOST=0.9798;RSQ=0.8081;ERATE=0.0019;THETA=0.0007;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 78942361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.966;LDAF=0.3992;AVGPOST=0.9847;RSQ=0.9769;ERATE=0.0013;THETA=0.0010;AC=880;AN=2184 GT:DS:GL:BD 0.40293041 0
1 78942364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.5060;AVGPOST=0.9903;RSQ=0.9871;ERATE=0.0005;THETA=0.0036;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 78942523 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.9539;AVGPOST=0.9963;RSQ=0.9670;ERATE=0.0005;THETA=0.0008;AC=2087;AN=2184 GT:DS:GL:BD 0.95558608 1
1 78942648 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0041;AVGPOST=0.9971;RSQ=0.7206;ERATE=0.0006;THETA=0.0023;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78942714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0236;AVGPOST=0.9988;RSQ=0.9803;ERATE=0.0003;THETA=0.0025;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78942797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.663;LDAF=0.0189;AVGPOST=0.9883;RSQ=0.7404;ERATE=0.0005;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78942890 rs74162241 G GA 688 PASS INDEL;BAVGPOST=0.919;BRSQ=0.443;LDAF=0.1323;AVGPOST=0.8423;RSQ=0.4149;ERATE=0.0266;THETA=0.0062;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 78942920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5392;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78942990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.951;LDAF=0.7070;AVGPOST=0.9559;RSQ=0.9254;ERATE=0.0051;THETA=0.0018;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 78943111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.633;LDAF=0.0072;AVGPOST=0.9944;RSQ=0.6651;ERATE=0.0006;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78943134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.7967;ERATE=0.0005;THETA=0.0033;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78943138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.861;LDAF=0.1833;AVGPOST=0.9729;RSQ=0.9404;ERATE=0.0009;THETA=0.0013;AC=410;AN=2184 GT:DS:GL:BD 0.18772894 0
1 78943176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7513;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78943222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8567;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78943242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.691;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7931;ERATE=0.0004;THETA=0.0061;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78943555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.480;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5487;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78943632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1548;AVGPOST=0.9906;RSQ=0.9782;ERATE=0.0004;THETA=0.0014;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 78943663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.926;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8835;ERATE=0.0004;THETA=0.0071;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78943670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9106;ERATE=0.0004;THETA=0.0032;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78943681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9371;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78943705 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.958;LDAF=0.9536;AVGPOST=0.9940;RSQ=0.9516;ERATE=0.0006;THETA=0.0013;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 78943714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9769;ERATE=0.0003;THETA=0.0052;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78943912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.766;LDAF=0.0243;AVGPOST=0.9873;RSQ=0.8129;ERATE=0.0007;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78943932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.858;LDAF=0.0357;AVGPOST=0.9832;RSQ=0.8313;ERATE=0.0013;THETA=0.0015;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 78943962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.7176;AVGPOST=0.9870;RSQ=0.9768;ERATE=0.0008;THETA=0.0057;AC=1569;AN=2184 GT:DS:GL:BD 0.71840662 1
1 78944022 . GAGA G 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0045;AVGPOST=0.9958;RSQ=0.6432;ERATE=0.0005;THETA=0.0041;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78944203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8063;ERATE=0.0004;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78944225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.803;LDAF=0.0271;AVGPOST=0.9825;RSQ=0.7586;ERATE=0.0039;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78944303 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6661;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78944403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.599;LDAF=0.0031;AVGPOST=0.9965;RSQ=0.5062;ERATE=0.0010;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78944532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.514;LDAF=0.0057;AVGPOST=0.9920;RSQ=0.4087;ERATE=0.0018;THETA=0.0057;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78944536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0027;AVGPOST=0.9965;RSQ=0.4200;ERATE=0.0006;THETA=0.0080;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78944538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.626;LDAF=0.0063;AVGPOST=0.9946;RSQ=0.6276;ERATE=0.0008;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78944592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.417;LDAF=0.0151;AVGPOST=0.9803;RSQ=0.4446;ERATE=0.0015;THETA=0.0091;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78944694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.809;LDAF=0.0061;AVGPOST=0.9957;RSQ=0.7420;ERATE=0.0004;THETA=0.0051;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78944808 . AAAAG A 25365 PASS INDEL;BAVGPOST=0.922;BRSQ=0.866;LDAF=0.3050;AVGPOST=0.9393;RSQ=0.9061;ERATE=0.0007;THETA=0.0032;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 78944830 . AAG A 1904 PASS INDEL;BAVGPOST=0.898;BRSQ=0.775;LDAF=0.2621;AVGPOST=0.9069;RSQ=0.8418;ERATE=0.0012;THETA=0.0022;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 78944836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9985;RSQ=0.9685;ERATE=0.0004;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78944968 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0242;AVGPOST=0.9970;RSQ=0.9470;ERATE=0.0006;THETA=0.0028;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78945064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9312;ERATE=0.0003;THETA=0.0056;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78945243 . CG C 94 PASS INDEL;BAVGPOST=0.297;BRSQ=0.003;LDAF=0.1951;AVGPOST=0.7081;RSQ=0.2187;ERATE=0.0146;THETA=0.0013;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 78945891 . CG C 21 PASS INDEL;BAVGPOST=0.336;BRSQ=0.004;LDAF=0.1891;AVGPOST=0.7258;RSQ=0.2519;ERATE=0.0160;THETA=0.0012;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 78945902 . CG C 83 PASS INDEL;BAVGPOST=0.452;BRSQ=0.001;LDAF=0.2456;AVGPOST=0.6460;RSQ=0.1930;ERATE=0.0207;THETA=0.0008;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 78945908 . CA C 81 PASS INDEL;BAVGPOST=0.582;BRSQ=0.009;LDAF=0.1603;AVGPOST=0.7631;RSQ=0.2919;ERATE=0.0110;THETA=0.0006;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 78945916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.941;BRSQ=0.914;LDAF=0.4153;AVGPOST=0.9391;RSQ=0.9166;ERATE=0.0013;THETA=0.0014;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 78946828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.825;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.9006;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78946996 . T TG 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4118;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78947043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7690;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78947161 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78947386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.535;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5000;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78947560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.656;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0059;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78947664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.881;LDAF=0.0185;AVGPOST=0.9975;RSQ=0.9450;ERATE=0.0005;THETA=0.0013;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78947980 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0063;AVGPOST=0.9988;RSQ=0.9284;ERATE=0.0004;THETA=0.0040;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78948057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8807;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78948076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78948315 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78948328 . TCTC T 310 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78948390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78948733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0038;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78948740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78948743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78948795 . TAAG T 3801 PASS INDEL;BAVGPOST=0.991;BRSQ=0.780;LDAF=0.0176;AVGPOST=0.9971;RSQ=0.9390;ERATE=0.0008;THETA=0.0033;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78948944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78949044 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.638;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7462;ERATE=0.0004;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78949201 . G GA 39 PASS INDEL;BAVGPOST=0.987;BRSQ=0.530;LDAF=0.0200;AVGPOST=0.9769;RSQ=0.5236;ERATE=0.0066;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78949219 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.679;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.7910;ERATE=0.0009;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78949454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6714;ERATE=0.0004;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78949699 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78949710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78949778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8452;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78949825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.905;LDAF=0.1542;AVGPOST=0.9824;RSQ=0.9520;ERATE=0.0007;THETA=0.0017;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 78949826 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0095;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78949910 . T TA 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.3903;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78950135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.909;LDAF=0.0299;AVGPOST=0.9952;RSQ=0.9334;ERATE=0.0005;THETA=0.0028;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78950219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78950288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7659;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78950302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5670;ERATE=0.0007;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78950380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.916;LDAF=0.0170;AVGPOST=0.9979;RSQ=0.9590;ERATE=0.0006;THETA=0.0008;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78950476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78950575 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.849;LDAF=0.0102;AVGPOST=0.9973;RSQ=0.8925;ERATE=0.0006;THETA=0.0043;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78950577 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5839;ERATE=0.0005;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78950638 rs36064435 T TA 19934 PASS INDEL;BAVGPOST=0.922;BRSQ=0.805;LDAF=0.2022;AVGPOST=0.9495;RSQ=0.8887;ERATE=0.0013;THETA=0.0153;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 78950781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9404;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78951060 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78951174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6293;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78951285 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6693;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78951363 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7025;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78951367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78951401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1064;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 78951485 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78951521 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0961;AVGPOST=0.9992;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 78951673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78951674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78951694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9083;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78951744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0582;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 78951822 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78951827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78951839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8721;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78952023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78952111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0098;AVGPOST=0.9942;RSQ=0.7732;ERATE=0.0006;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78952117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78952254 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78952261 . TTA T 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78952263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0095;AVGPOST=0.9981;RSQ=0.9220;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78952359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0269;AVGPOST=0.9993;RSQ=0.9916;ERATE=0.0003;THETA=0.0013;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78952361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6205;AVGPOST=0.9945;RSQ=0.9917;ERATE=0.0011;THETA=0.0005;AC=1355;AN=2184 GT:DS:GL:BD 0.62042123 1
1 78952401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5722;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78952445 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9438;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78952522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7547;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78952553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78952594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8876;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78952816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0082;AVGPOST=0.9989;RSQ=0.9429;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78952856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0172;AVGPOST=0.9992;RSQ=0.9819;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 78952864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9997;RSQ=0.9866;ERATE=0.0004;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78952887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9504;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78952914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5879;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78952915 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78953254 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6413;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78953268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1067;AVGPOST=0.9982;RSQ=0.9937;ERATE=0.0003;THETA=0.0027;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 78953285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9310;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78953515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6201;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78953531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.8215;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78953538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78953720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78953803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78953845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78954077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0048;AVGPOST=0.9966;RSQ=0.6742;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78954139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7866;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78954150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78954160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9304;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78954229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.976;LDAF=0.4057;AVGPOST=0.9785;RSQ=0.9687;ERATE=0.0010;THETA=0.0004;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 78954278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.8111;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78954336 rs111645583 TTTTG T 6568 PASS INDEL;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0397;AVGPOST=0.9964;RSQ=0.9664;ERATE=0.0010;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 78954383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4631;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78954457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.945;LDAF=0.0679;AVGPOST=0.9923;RSQ=0.9561;ERATE=0.0009;THETA=0.0015;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 78954532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0215;AVGPOST=0.9980;RSQ=0.9609;ERATE=0.0006;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78954536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0042;AVGPOST=0.9951;RSQ=0.5332;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78954537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.8858;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78954570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6226;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78954770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0573;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 78954892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8948;ERATE=0.0004;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78954936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0058;AVGPOST=0.9920;RSQ=0.4325;ERATE=0.0010;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78955171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0068;AVGPOST=0.9983;RSQ=0.9135;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78955279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0084;AVGPOST=0.9985;RSQ=0.9248;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78955314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5976;AVGPOST=0.9952;RSQ=0.9928;ERATE=0.0007;THETA=0.0008;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 78955384 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0575;AVGPOST=0.9991;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 78955403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9769;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78955458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1582;AVGPOST=0.9975;RSQ=0.9922;ERATE=0.0005;THETA=0.0005;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 78955505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6611;ERATE=0.0011;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78955509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9981;RSQ=0.9526;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78955542 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4108;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78955579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6956;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78955606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 78955652 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78955670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1040;AVGPOST=0.9988;RSQ=0.9949;ERATE=0.0003;THETA=0.0007;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 78955804 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.907;LDAF=0.0103;AVGPOST=0.9961;RSQ=0.8448;ERATE=0.0005;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78955847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9490;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78955852 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78955911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78956050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78956077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7369;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78956086 rs112312990 ATTG A 280 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.4962;ERATE=0.0008;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78956103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7855;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78956122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6932;ERATE=0.0013;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78956135 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0616;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 78956136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1870;AVGPOST=0.9963;RSQ=0.9905;ERATE=0.0005;THETA=0.0003;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 78956145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1265;AVGPOST=0.9984;RSQ=0.9938;ERATE=0.0005;THETA=0.0003;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 78956179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78956219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0047;AVGPOST=0.9991;RSQ=0.9315;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78956223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78956297 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0004;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78956333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0622;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 78956405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5902;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78956542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.7274;AVGPOST=0.9955;RSQ=0.9922;ERATE=0.0004;THETA=0.0015;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 78956553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0011;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78956560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6563;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78956665 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7668;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78956788 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0661;AVGPOST=0.9967;RSQ=0.9823;ERATE=0.0004;THETA=0.0005;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 78956851 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5134;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78956874 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6929;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78957054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0866;AVGPOST=0.9988;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 78957123 . C CT 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6455;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78957548 . T TA 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3981;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78957555 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.736;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9186;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78957622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0613;AVGPOST=0.9979;RSQ=0.9849;ERATE=0.0004;THETA=0.0009;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 78957684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78957927 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0611;AVGPOST=0.9989;RSQ=0.9922;ERATE=0.0003;THETA=0.0011;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 78957973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9374;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78957997 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6206;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78958014 . ACTT A 332 PASS INDEL;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78958179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6960;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78958200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5792;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78958208 . GT G 168 PASS INDEL;BAVGPOST=0.998;BRSQ=0.586;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6770;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78958239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7830;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78958291 . ACC A 20 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4452;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78958296 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6958;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78958298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5079;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78958421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9149;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78958520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7555;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78958555 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6957;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78958569 rs112320980 TTA T 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6793;ERATE=0.0008;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78958610 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0520;AVGPOST=0.9966;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 78958671 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0524;AVGPOST=0.9969;RSQ=0.9785;ERATE=0.0003;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 78958672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4936;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78958689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6686;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78958728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78958736 rs111709709 T TAAC 509 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.5658;ERATE=0.0011;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78958790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8043;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78958850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78958879 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78958896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78958923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78959058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0698;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78959119 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9678;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78959147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6471;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78959268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78959322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78959330 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8742;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78959346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7467;ERATE=0.0010;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78959367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7286;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78959389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7038;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78959410 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.6523;ERATE=0.0016;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78959533 . C CT 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5696;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78959649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9309;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78959684 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0616;AVGPOST=0.9970;RSQ=0.9807;ERATE=0.0004;THETA=0.0006;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 78959742 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8998;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78960101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.655;LDAF=0.0094;AVGPOST=0.9915;RSQ=0.6294;ERATE=0.0015;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78960308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0069;AVGPOST=0.9993;RSQ=0.9624;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78960377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.0646;AVGPOST=0.9984;RSQ=0.9901;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 78960518 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7485;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78960537 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6684;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78960596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7318;AVGPOST=0.9948;RSQ=0.9915;ERATE=0.0003;THETA=0.0010;AC=1601;AN=2184 GT:DS:GL:BD 0.73305863 1
1 78960674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6728;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78960839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5854;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78960840 . AT A 2267 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0418;AVGPOST=0.9984;RSQ=0.9858;ERATE=0.0004;THETA=0.0004;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 78960893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0272;AVGPOST=0.9992;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78961003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0039;AVGPOST=0.9977;RSQ=0.7540;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78961006 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7254;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78961043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9996;RSQ=0.8979;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78961076 . CA C 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5940;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78961114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78961134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78961311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0479;AVGPOST=0.9986;RSQ=0.9895;ERATE=0.0003;THETA=0.0008;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78961337 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0981;AVGPOST=0.9973;RSQ=0.9880;ERATE=0.0004;THETA=0.0005;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 78961342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78961426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0976;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 78961438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9822;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78961456 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78961522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8279;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78961535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0435;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 78961752 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78961883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78961921 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0049;AVGPOST=0.9988;RSQ=0.9247;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78962055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0436;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 78962076 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0118;AVGPOST=0.9989;RSQ=0.9701;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78962270 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78962343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7712;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78962464 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7242;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78962487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78962506 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78962553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9639;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78962665 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9998;RSQ=0.9845;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78962666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.8241;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78962754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78962839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78962888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0961;AVGPOST=0.9976;RSQ=0.9890;ERATE=0.0004;THETA=0.0005;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 78962893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78963099 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78963193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78963225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78963226 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9667;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78963349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2875;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0006;THETA=0.0005;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 78963406 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78963424 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78963559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78963628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 78963657 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78963727 . AG A 18046 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1284;AVGPOST=0.9981;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 78963766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7709;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78963777 . TTCTC T 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78963847 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78963868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78963955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78963968 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78963981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78964069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78964163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78964232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78964277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9279;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78964361 . G GC 1129 PASS INDEL;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0080;AVGPOST=0.9987;RSQ=0.9286;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 78964393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0549;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0007;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 78964401 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78964519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 78964542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0247;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78964682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78964820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78965023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78965108 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9688;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78965120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7176;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78965230 . TA T 112 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8207;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78965279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5471;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78965504 . GA G 186 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.6020;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78965534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0537;AVGPOST=0.9973;RSQ=0.9814;ERATE=0.0005;THETA=0.0012;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 78965595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0973;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 78965692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78965745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0187;AVGPOST=0.9969;RSQ=0.9352;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78965786 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78965872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7203;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78965888 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6422;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78965921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78965924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.960;LDAF=0.0412;AVGPOST=0.9980;RSQ=0.9838;ERATE=0.0004;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 78965988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0131;AVGPOST=0.9941;RSQ=0.8204;ERATE=0.0056;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78966043 . CAGA C 469 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9723;ERATE=0.0003;THETA=0.0013;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78966044 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.710;LDAF=0.0392;AVGPOST=0.9691;RSQ=0.7141;ERATE=0.0090;THETA=0.0032;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 78966112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9753;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78966128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.872;LDAF=0.0223;AVGPOST=0.9898;RSQ=0.8496;ERATE=0.0006;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78966171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.659;LDAF=0.0069;AVGPOST=0.9938;RSQ=0.6077;ERATE=0.0007;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78966216 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.615;LDAF=0.1245;AVGPOST=0.8851;RSQ=0.5601;ERATE=0.0332;THETA=0.0003;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 78966262 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.963;LDAF=0.4146;AVGPOST=0.9850;RSQ=0.9787;ERATE=0.0006;THETA=0.0054;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 78966264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0262;AVGPOST=0.9981;RSQ=0.9693;ERATE=0.0004;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78966300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.738;LDAF=0.0319;AVGPOST=0.9746;RSQ=0.6762;ERATE=0.0099;THETA=0.0023;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78966314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.847;LDAF=0.6940;AVGPOST=0.9131;RSQ=0.8634;ERATE=0.0332;THETA=0.0005;AC=1553;AN=2184 GT:DS:GL:BD 0.71108061 1
1 78966382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0383;AVGPOST=0.9957;RSQ=0.9677;ERATE=0.0045;THETA=0.0014;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78966411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.966;LDAF=0.1831;AVGPOST=0.9875;RSQ=0.9705;ERATE=0.0096;THETA=0.0030;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 78966429 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2393;AVGPOST=0.9947;RSQ=0.9898;ERATE=0.0058;THETA=0.0010;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 78966453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0136;AVGPOST=0.9957;RSQ=0.8948;ERATE=0.0018;THETA=0.0020;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78966459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0265;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78966478 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0070;AVGPOST=0.9982;RSQ=0.9139;ERATE=0.0012;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78966489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78966507 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78966540 rs11339452 CT C 13883 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1966;AVGPOST=0.9950;RSQ=0.9866;ERATE=0.0010;THETA=0.0004;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 78966568 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0250;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0028;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 78966592 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78966624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9568;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78966654 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7924;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0004;THETA=0.0011;AC=1731;AN=2184 GT:DS:GL:BD 0.79258239 1
1 78966667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9165;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78966693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78966730 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8005;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78966764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8140;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78966772 . TA T 71 PASS INDEL;BAVGPOST=0.937;BRSQ=0.115;LDAF=0.1106;AVGPOST=0.8268;RSQ=0.2881;ERATE=0.0082;THETA=0.0007;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 78966828 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.898;LDAF=0.0295;AVGPOST=0.9911;RSQ=0.8850;ERATE=0.0026;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 78966833 . AT A 118 PASS INDEL;BAVGPOST=0.988;BRSQ=0.399;LDAF=0.0163;AVGPOST=0.9781;RSQ=0.4799;ERATE=0.0038;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78966833 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7012;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78966854 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.936;LDAF=0.0170;AVGPOST=0.9969;RSQ=0.9185;ERATE=0.0005;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78966900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.977;LDAF=0.1989;AVGPOST=0.9893;RSQ=0.9734;ERATE=0.0006;THETA=0.0012;AC=431;AN=2184 GT:DS:GL:BD 0.19734432 0
1 78966924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.502;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.5498;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78967147 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.920;LDAF=0.1883;AVGPOST=0.9862;RSQ=0.9631;ERATE=0.0009;THETA=0.0046;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 78967190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6578;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78967278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9468;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78967291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9991;RSQ=0.9645;ERATE=0.0004;THETA=0.0017;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78967298 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.857;LDAF=0.0133;AVGPOST=0.9963;RSQ=0.8934;ERATE=0.0005;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78967332 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78967366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9245;ERATE=0.0005;THETA=0.0021;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78967380 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0153;AVGPOST=0.9971;RSQ=0.9170;ERATE=0.0005;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78967402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4213;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78967414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0093;AVGPOST=0.9983;RSQ=0.9325;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78967436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9994;RSQ=0.9671;ERATE=0.0005;THETA=0.0018;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78967468 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0130;AVGPOST=0.9977;RSQ=0.9165;ERATE=0.0007;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78967722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.721;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.2949;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78967756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.908;LDAF=0.0177;AVGPOST=0.9904;RSQ=0.7825;ERATE=0.0006;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78967773 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0110;AVGPOST=0.9975;RSQ=0.9007;ERATE=0.0004;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78967816 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0196;AVGPOST=0.9903;RSQ=0.7994;ERATE=0.0011;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78967852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.792;LDAF=0.0392;AVGPOST=0.9799;RSQ=0.8125;ERATE=0.0031;THETA=0.0011;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 78967924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.829;LDAF=0.0516;AVGPOST=0.9867;RSQ=0.9051;ERATE=0.0009;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78967946 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.892;LDAF=0.7368;AVGPOST=0.9434;RSQ=0.8846;ERATE=0.0042;THETA=0.0032;AC=1657;AN=2184 GT:DS:GL:BD 0.75869966 1
1 78968028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.955;LDAF=0.7339;AVGPOST=0.9527;RSQ=0.9140;ERATE=0.0059;THETA=0.0043;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 78968113 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.834;LDAF=0.0252;AVGPOST=0.9963;RSQ=0.9358;ERATE=0.0008;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78968148 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.805;BRSQ=0.755;LDAF=0.5502;AVGPOST=0.8621;RSQ=0.8378;ERATE=0.0016;THETA=0.0011;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 78968166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.787;BRSQ=0.733;LDAF=0.5710;AVGPOST=0.8391;RSQ=0.8099;ERATE=0.0035;THETA=0.0004;AC=1312;AN=2184 GT:DS:GL:BD 0.60073262 1
1 78968167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.793;BRSQ=0.741;LDAF=0.4995;AVGPOST=0.8165;RSQ=0.7775;ERATE=0.0070;THETA=0.0038;AC=1155;AN=2184 GT:DS:GL:BD 0.52884614 1
1 78968170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0038;AVGPOST=0.9943;RSQ=0.4823;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78968312 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8688;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78968526 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0141;AVGPOST=0.9981;RSQ=0.9456;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78969187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7339;ERATE=0.0005;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78969433 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0005;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78969437 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6560;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78969443 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.847;LDAF=0.6789;AVGPOST=0.9384;RSQ=0.8995;ERATE=0.0044;THETA=0.0011;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 78969491 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0142;AVGPOST=0.9982;RSQ=0.9469;ERATE=0.0004;THETA=0.0014;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78969735 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.390;LDAF=0.0157;AVGPOST=0.9793;RSQ=0.4443;ERATE=0.0018;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78969824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.830;BRSQ=0.687;LDAF=0.6735;AVGPOST=0.8160;RSQ=0.7207;ERATE=0.0148;THETA=0.0008;AC=1538;AN=2184 GT:DS:GL:BD 0.70421243 1
1 78969835 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.364;LDAF=0.0128;AVGPOST=0.9841;RSQ=0.5170;ERATE=0.0011;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78969845 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0227;AVGPOST=0.9989;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 78969893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.763;LDAF=0.0056;AVGPOST=0.9990;RSQ=0.9028;ERATE=0.0004;THETA=0.0020;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78969962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78970039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.1944;AVGPOST=0.9964;RSQ=0.9905;ERATE=0.0005;THETA=0.0007;AC=427;AN=2184 GT:DS:GL:BD 0.19551282 0
1 78970077 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9991;RSQ=0.9544;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 78970150 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.595;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5836;ERATE=0.0011;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78970249 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.830;LDAF=0.0110;AVGPOST=0.9937;RSQ=0.7664;ERATE=0.0016;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 78970279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.853;LDAF=0.6182;AVGPOST=0.8942;RSQ=0.8592;ERATE=0.0053;THETA=0.0005;AC=1382;AN=2184 GT:DS:GL:BD 0.63278389 1
1 78970437 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7096;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78970448 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.879;BRSQ=0.818;LDAF=0.6390;AVGPOST=0.8632;RSQ=0.8232;ERATE=0.0082;THETA=0.0006;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 78970460 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.560;LDAF=0.0078;AVGPOST=0.9909;RSQ=0.5034;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78970473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9408;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78970585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.963;LDAF=0.5233;AVGPOST=0.9785;RSQ=0.9669;ERATE=0.0024;THETA=0.0006;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 78970666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6020;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78970704 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.962;LDAF=0.4253;AVGPOST=0.9860;RSQ=0.9797;ERATE=0.0011;THETA=0.0007;AC=920;AN=2184 GT:DS:GL:BD 0.42124543 0
1 78970821 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.904;BRSQ=0.842;LDAF=0.6832;AVGPOST=0.9542;RSQ=0.9353;ERATE=0.0011;THETA=0.0010;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 78970906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0061;AVGPOST=0.9974;RSQ=0.8126;ERATE=0.0006;THETA=0.0030;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78970941 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7657;AVGPOST=0.9978;RSQ=0.9946;ERATE=0.0006;THETA=0.0014;AC=1673;AN=2184 GT:DS:GL:BD 0.76602566 1
1 78970991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0266;AVGPOST=0.9970;RSQ=0.9554;ERATE=0.0005;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78970999 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0145;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78971422 . GAT G 32 PASS INDEL;BAVGPOST=0.993;BRSQ=0.494;LDAF=0.0130;AVGPOST=0.9833;RSQ=0.4909;ERATE=0.0031;THETA=0.0115;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78971529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7339;ERATE=0.0005;THETA=0.0056;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78971539 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8352;ERATE=0.0005;THETA=0.0017;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78971639 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0125;AVGPOST=0.9988;RSQ=0.9582;ERATE=0.0003;THETA=0.0076;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78971697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7973;ERATE=0.0003;THETA=0.0119;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78971765 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78972401 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0052;AVGPOST=0.9976;RSQ=0.8444;ERATE=0.0005;THETA=0.0057;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78972461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8738;ERATE=0.0003;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78972712 . G GT 847 PASS INDEL;BAVGPOST=0.982;BRSQ=0.767;LDAF=0.0505;AVGPOST=0.9642;RSQ=0.6832;ERATE=0.0201;THETA=0.0012;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 78972870 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8717;ERATE=0.0004;THETA=0.0117;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78972921 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0121;AVGPOST=0.9978;RSQ=0.9288;ERATE=0.0004;THETA=0.0057;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78972985 . C CT 344 PASS INDEL;BAVGPOST=0.987;BRSQ=0.678;LDAF=0.0271;AVGPOST=0.9742;RSQ=0.5931;ERATE=0.0088;THETA=0.0060;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 78973018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6710;ERATE=0.0006;THETA=0.0122;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78973022 . G GT 2296 PASS INDEL;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0264;AVGPOST=0.9956;RSQ=0.9293;ERATE=0.0005;THETA=0.0081;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78973026 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.5840;ERATE=0.0013;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78973049 . A AT 849 PASS INDEL;BAVGPOST=0.936;BRSQ=0.540;LDAF=0.1093;AVGPOST=0.8892;RSQ=0.5302;ERATE=0.0286;THETA=0.0018;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 78973311 . TA T 1802 PASS INDEL;BAVGPOST=0.954;BRSQ=0.665;LDAF=0.0992;AVGPOST=0.9220;RSQ=0.6160;ERATE=0.0375;THETA=0.0067;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 78973656 . TG T 413 PASS INDEL;BAVGPOST=0.973;BRSQ=0.631;LDAF=0.0487;AVGPOST=0.9534;RSQ=0.5863;ERATE=0.0131;THETA=0.0085;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 78973809 . T TA 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.4871;ERATE=0.0008;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78973914 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.932;LDAF=0.9023;AVGPOST=0.9746;RSQ=0.8952;ERATE=0.0010;THETA=0.0080;AC=1978;AN=2184 GT:DS:GL:BD 0.90567768 1
1 78974003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78974085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78974241 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.905;LDAF=0.0259;AVGPOST=0.9948;RSQ=0.9236;ERATE=0.0005;THETA=0.0011;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78974736 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0058;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78974901 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.830;LDAF=0.0174;AVGPOST=0.9935;RSQ=0.8577;ERATE=0.0004;THETA=0.0022;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78974956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6053;ERATE=0.0003;THETA=0.0130;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78975390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78975606 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0004;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78975649 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0050;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78975714 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7891;ERATE=0.0004;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78975781 rs112618506 C CT 30 PASS INDEL;BAVGPOST=0.997;BRSQ=0.659;LDAF=0.0065;AVGPOST=0.9939;RSQ=0.6478;ERATE=0.0024;THETA=0.0057;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78975795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0102;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78975813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.828;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8162;ERATE=0.0004;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78975834 . C CAT 25615 PASS INDEL;BAVGPOST=0.886;BRSQ=0.630;LDAF=0.8195;AVGPOST=0.8309;RSQ=0.5864;ERATE=0.0128;THETA=0.0016;AC=1935;AN=2184 GT:DS:GL:BD 0.88598901 1
1 78975890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8385;ERATE=0.0004;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78975955 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5509;ERATE=0.0004;THETA=0.0052;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78976000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9077;ERATE=0.0003;THETA=0.0019;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78976080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7152;ERATE=0.0006;THETA=0.0064;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78976086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0146;AVGPOST=0.9961;RSQ=0.9044;ERATE=0.0008;THETA=0.0085;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78976167 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78976174 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6753;ERATE=0.0005;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78976236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8839;ERATE=0.0004;THETA=0.0065;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78976347 . TTG T 125 PASS INDEL;BAVGPOST=0.997;BRSQ=0.764;LDAF=0.0084;AVGPOST=0.9932;RSQ=0.6507;ERATE=0.0032;THETA=0.0032;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78976391 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7452;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78976420 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9679;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78976532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.799;BRSQ=0.767;LDAF=0.4534;AVGPOST=0.8463;RSQ=0.8066;ERATE=0.0007;THETA=0.0010;AC=976;AN=2184 GT:DS:GL:BD 0.44688645 0
1 78976552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0198;AVGPOST=0.9986;RSQ=0.9789;ERATE=0.0003;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 78976620 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78976718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0156;AVGPOST=0.9991;RSQ=0.9769;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 78976774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78976780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6022;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78976783 . CA C 425 PASS INDEL;BAVGPOST=0.996;BRSQ=0.894;LDAF=0.0171;AVGPOST=0.9901;RSQ=0.7917;ERATE=0.0029;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78976816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0130;AVGPOST=0.9980;RSQ=0.9460;ERATE=0.0005;THETA=0.0009;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78976936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.284;LDAF=0.0030;AVGPOST=0.9961;RSQ=0.4323;ERATE=0.0008;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78976946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8399;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78977012 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0652;AVGPOST=0.9967;RSQ=0.9799;ERATE=0.0007;THETA=0.0007;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 78977038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0083;AVGPOST=0.9959;RSQ=0.8053;ERATE=0.0005;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78977110 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0691;AVGPOST=0.9988;RSQ=0.9941;ERATE=0.0003;THETA=0.0006;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 78977111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.494;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3848;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78977292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8212;AVGPOST=0.9975;RSQ=0.9931;ERATE=0.0004;THETA=0.0003;AC=1793;AN=2184 GT:DS:GL:BD 0.82097071 1
1 78977329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0152;AVGPOST=0.9987;RSQ=0.9687;ERATE=0.0003;THETA=0.0012;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 78977394 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9836;ERATE=0.0003;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78977423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9348;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78977468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78977479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0654;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0013;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 78977522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3923;AVGPOST=0.9964;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=854;AN=2184 GT:DS:GL:BD 0.39102563 0
1 78977587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6215;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78977662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0655;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 78977787 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78977819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 78977832 . CA C 70 PASS INDEL;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7022;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78977930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6125;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78977946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2318;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 78977979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8198;AVGPOST=0.9983;RSQ=0.9955;ERATE=0.0004;THETA=0.0007;AC=1791;AN=2184 GT:DS:GL:BD 0.82005495 1
1 78977991 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8197;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=1791;AN=2184 GT:DS:GL:BD 0.82005495 1
1 78978002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6453;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78978034 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78978054 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9355;ERATE=0.0005;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78978084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2314;AVGPOST=0.9982;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=504;AN=2184 GT:DS:GL:BD 0.23076923 0
1 78978123 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.697;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7400;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78978126 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0654;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 78978134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8885;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78978190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78978275 . A AG 8554 PASS INDEL;BAVGPOST=0.944;BRSQ=0.893;LDAF=0.3224;AVGPOST=0.9446;RSQ=0.9181;ERATE=0.0008;THETA=0.0006;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 78978345 . T TG 5788 PASS INDEL;BAVGPOST=0.910;BRSQ=0.824;LDAF=0.3363;AVGPOST=0.9420;RSQ=0.9161;ERATE=0.0009;THETA=0.0003;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 78978347 . T TG 9335 PASS INDEL;BAVGPOST=0.944;BRSQ=0.892;LDAF=0.3261;AVGPOST=0.9488;RSQ=0.9267;ERATE=0.0005;THETA=0.0009;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 78978349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5165;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78978375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.8725;AVGPOST=0.9976;RSQ=0.9908;ERATE=0.0005;THETA=0.0006;AC=1906;AN=2184 GT:DS:GL:BD 0.87271065 1
1 78978401 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9993;RSQ=0.9795;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78978427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0700;AVGPOST=0.9989;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 78978492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.3913;AVGPOST=0.9957;RSQ=0.9928;ERATE=0.0007;THETA=0.0003;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 78978545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.949;LDAF=0.0650;AVGPOST=0.9967;RSQ=0.9803;ERATE=0.0008;THETA=0.0007;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 78978577 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.445;LDAF=0.0098;AVGPOST=0.9873;RSQ=0.5025;ERATE=0.0032;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78978598 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0084;AVGPOST=0.9954;RSQ=0.7799;ERATE=0.0007;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78978690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0703;AVGPOST=0.9981;RSQ=0.9894;ERATE=0.0006;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 78978714 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.659;LDAF=0.0039;AVGPOST=0.9967;RSQ=0.6490;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78978719 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5378;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78978778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0699;AVGPOST=0.9990;RSQ=0.9938;ERATE=0.0004;THETA=0.0012;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 78978824 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0666;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0005;THETA=0.0003;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 78978827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7754;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78978900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8906;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78979041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78979124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9213;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78979137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4902;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78979337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78979350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0117;AVGPOST=0.9989;RSQ=0.9723;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78979453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4532;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78979469 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3755;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78979862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5125;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78979884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1350;AVGPOST=0.9975;RSQ=0.9919;ERATE=0.0007;THETA=0.0013;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 78979922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6381;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=1393;AN=2184 GT:DS:GL:BD 0.63782054 1
1 78980097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7901;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78980113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78980139 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9213;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78980191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9985;RSQ=0.9091;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78980319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8049;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78980371 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9297;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78980406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.2998;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78980438 . AAT A 1454 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0067;AVGPOST=0.9989;RSQ=0.9252;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78980562 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0775;AVGPOST=0.9915;RSQ=0.9667;ERATE=0.0003;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 78980657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6838;ERATE=0.0007;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78980680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0114;AVGPOST=0.9983;RSQ=0.9488;ERATE=0.0006;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78980681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1347;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0004;THETA=0.0009;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 78980811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0126;AVGPOST=0.9995;RSQ=0.9804;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 78980823 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78980957 . AAG A 383 PASS INDEL;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8543;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78980971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78980978 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1348;AVGPOST=0.9938;RSQ=0.9832;ERATE=0.0008;THETA=0.0008;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 78981157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9121;ERATE=0.0004;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78981197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7190;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78981208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78981247 . A AGT 9594 PASS INDEL;BAVGPOST=0.924;BRSQ=0.847;LDAF=0.3193;AVGPOST=0.9342;RSQ=0.8937;ERATE=0.0075;THETA=0.0005;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 78981248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8187;AVGPOST=0.9978;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=1790;AN=2184 GT:DS:GL:BD 0.81959707 1
1 78981264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 78981286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0128;AVGPOST=0.9989;RSQ=0.9729;ERATE=0.0004;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78981293 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 78981340 . C CA 9967 PASS INDEL;BAVGPOST=0.933;BRSQ=0.872;LDAF=0.3647;AVGPOST=0.9511;RSQ=0.9251;ERATE=0.0034;THETA=0.0003;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 78981387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.804;LDAF=0.0085;AVGPOST=0.9961;RSQ=0.7886;ERATE=0.0012;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78981412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8191;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0005;THETA=0.0007;AC=1790;AN=2184 GT:DS:GL:BD 0.81959707 1
1 78981427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.891;LDAF=0.0131;AVGPOST=0.9970;RSQ=0.9182;ERATE=0.0003;THETA=0.0016;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78981516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9542;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78981578 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78981591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78981650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0044;AVGPOST=0.9962;RSQ=0.6091;ERATE=0.0009;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78981746 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0152;AVGPOST=0.9971;RSQ=0.9259;ERATE=0.0005;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78981875 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0744;AVGPOST=0.9981;RSQ=0.9899;ERATE=0.0004;THETA=0.0004;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 78981935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78982057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8587;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78982125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78982281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78982449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0866;AVGPOST=0.9973;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 78982460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.7583;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78982513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4469;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78982557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0479;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0004;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78982567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6523;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78982600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0026;AVGPOST=0.9970;RSQ=0.5864;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78982604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4635;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78982756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9716;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 78982853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7066;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78982901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0040;AVGPOST=0.9970;RSQ=0.7387;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78982957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0494;AVGPOST=0.9960;RSQ=0.9688;ERATE=0.0005;THETA=0.0004;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78983128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0057;AVGPOST=0.9981;RSQ=0.8479;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78983171 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2355;AVGPOST=0.9961;RSQ=0.9911;ERATE=0.0004;THETA=0.0006;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 78983186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8397;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78983227 . CT C 23 PASS INDEL;BAVGPOST=0.999;BRSQ=0.554;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3698;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78983308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78983456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0146;AVGPOST=0.9990;RSQ=0.9774;ERATE=0.0004;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78983465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8348;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78983547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0086;AVGPOST=0.9954;RSQ=0.8006;ERATE=0.0006;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 78983728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5758;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78983941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1986;AVGPOST=0.9931;RSQ=0.9839;ERATE=0.0003;THETA=0.0016;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 78984003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1122;AVGPOST=0.9945;RSQ=0.9809;ERATE=0.0005;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 78984048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0742;AVGPOST=0.9977;RSQ=0.9875;ERATE=0.0004;THETA=0.0003;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 78984051 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4924;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78984141 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0035;AVGPOST=0.9951;RSQ=0.4769;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78984222 . CA C 1196 PASS INDEL;BAVGPOST=0.921;BRSQ=0.504;LDAF=0.1131;AVGPOST=0.8750;RSQ=0.5224;ERATE=0.0215;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 78984235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3016;AVGPOST=0.9926;RSQ=0.9870;ERATE=0.0014;THETA=0.0007;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 78984236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1109;AVGPOST=0.9945;RSQ=0.9786;ERATE=0.0008;THETA=0.0028;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 78984253 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0073;AVGPOST=0.9987;RSQ=0.9268;ERATE=0.0005;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78984257 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.534;LDAF=0.0035;AVGPOST=0.9939;RSQ=0.2895;ERATE=0.0010;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78984356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.1740;AVGPOST=0.9976;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 78984492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5004;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78984552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1755;AVGPOST=0.9975;RSQ=0.9939;ERATE=0.0006;THETA=0.0010;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 78984627 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78984634 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0139;AVGPOST=0.9979;RSQ=0.9451;ERATE=0.0004;THETA=0.0028;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78984734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0109;AVGPOST=0.9979;RSQ=0.9243;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78984792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.973;LDAF=0.0839;AVGPOST=0.9951;RSQ=0.9778;ERATE=0.0005;THETA=0.0002;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 78984856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.755;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6417;ERATE=0.0004;THETA=0.0049;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78984896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0038;AVGPOST=0.9953;RSQ=0.5314;ERATE=0.0010;THETA=0.0046;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78985087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0004;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78985097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0106;AVGPOST=0.9981;RSQ=0.9204;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78985182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0005;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78985222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.696;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6646;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78985248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.930;LDAF=0.5789;AVGPOST=0.9534;RSQ=0.9317;ERATE=0.0040;THETA=0.0005;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 78985651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.940;LDAF=0.4136;AVGPOST=0.9700;RSQ=0.9555;ERATE=0.0012;THETA=0.0092;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 78985655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78985768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3839;AVGPOST=0.9968;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=839;AN=2184 GT:DS:GL:BD 0.38415751 0
1 78986072 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78986127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0487;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0003;THETA=0.0008;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 78986191 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0216;AVGPOST=0.9983;RSQ=0.9728;ERATE=0.0004;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78986226 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7083;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78986228 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6226;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78986232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5730;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78986243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0144;AVGPOST=0.9993;RSQ=0.9758;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 78986246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0133;AVGPOST=0.9983;RSQ=0.9545;ERATE=0.0005;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78986267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7040;AVGPOST=0.9943;RSQ=0.9905;ERATE=0.0006;THETA=0.0006;AC=1539;AN=2184 GT:DS:GL:BD 0.70467031 1
1 78986335 . C CCTTT 501 PASS INDEL;BAVGPOST=0.841;BRSQ=0.167;LDAF=0.2074;AVGPOST=0.7207;RSQ=0.2947;ERATE=0.0242;THETA=0.0006;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 78986400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0053;AVGPOST=0.9965;RSQ=0.7405;ERATE=0.0006;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78986475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0037;AVGPOST=0.9969;RSQ=0.6768;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78986514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0318;AVGPOST=0.9988;RSQ=0.9857;ERATE=0.0004;THETA=0.0014;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 78986548 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.581;LDAF=0.0045;AVGPOST=0.9955;RSQ=0.5856;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78986560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.8836;AVGPOST=0.9880;RSQ=0.9576;ERATE=0.0022;THETA=0.0005;AC=1939;AN=2184 GT:DS:GL:BD 0.88782054 1
1 78986561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.444;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4140;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78986585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0750;AVGPOST=0.9866;RSQ=0.9323;ERATE=0.0006;THETA=0.0006;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 78986599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.957;LDAF=0.5717;AVGPOST=0.9604;RSQ=0.9457;ERATE=0.0061;THETA=0.0009;AC=1270;AN=2184 GT:DS:GL:BD 0.58150184 1
1 78986630 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78986666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8023;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78986668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8452;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78986669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7630;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78986716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2441;AVGPOST=0.9967;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 78986756 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0700;AVGPOST=0.9989;RSQ=0.9930;ERATE=0.0003;THETA=0.0005;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 78986844 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.507;LDAF=0.0029;AVGPOST=0.9955;RSQ=0.4037;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78986855 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78986881 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.842;LDAF=0.8879;AVGPOST=0.9500;RSQ=0.8163;ERATE=0.0140;THETA=0.0004;AC=1967;AN=2184 GT:DS:GL:BD 0.90064102 1
1 78986983 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0699;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 78987114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0258;AVGPOST=0.9989;RSQ=0.9839;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 78987122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0697;AVGPOST=0.9989;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 78987158 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5871;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78987197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78987203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0678;AVGPOST=0.9987;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 78987219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0665;AVGPOST=0.9987;RSQ=0.9916;ERATE=0.0004;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 78987289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.7046;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78987348 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0180;AVGPOST=0.9975;RSQ=0.9454;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78987353 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9609;AVGPOST=0.9994;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=2099;AN=2184 GT:DS:GL:BD 0.96108061 1
1 78987443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5372;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78987514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8951;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78987518 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78987556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0221;AVGPOST=0.9989;RSQ=0.9781;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 78987607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8378;AVGPOST=0.9980;RSQ=0.9945;ERATE=0.0005;THETA=0.0037;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 78987658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6520;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78987671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8165;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78987690 . CAG C 179 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78987817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9278;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78987857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78987864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0511;AVGPOST=0.9989;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 78987870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8410;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78987944 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0291;AVGPOST=0.9994;RSQ=0.9907;ERATE=0.0003;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78987995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0291;AVGPOST=0.9994;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78988030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4038;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78988092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9299;AVGPOST=0.9984;RSQ=0.9925;ERATE=0.0003;THETA=0.0006;AC=2032;AN=2184 GT:DS:GL:BD 0.93040293 1
1 78988113 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8734;ERATE=0.0003;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78988127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7464;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78988233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.9283;ERATE=0.0002;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78988260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0831;AVGPOST=0.9972;RSQ=0.9872;ERATE=0.0002;THETA=0.0012;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 78988642 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0817;AVGPOST=0.9970;RSQ=0.9869;ERATE=0.0003;THETA=0.0004;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 78988647 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0816;AVGPOST=0.9968;RSQ=0.9862;ERATE=0.0003;THETA=0.0004;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 78988650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78988656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0041;AVGPOST=0.9975;RSQ=0.7474;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78988791 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9847;ERATE=0.0003;THETA=0.0024;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 78988900 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78988918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0113;AVGPOST=0.9995;RSQ=0.9841;ERATE=0.0002;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78988962 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78988986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5558;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78989092 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78989217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8755;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78989219 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5140;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78989237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78989241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78989251 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6057;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78989319 . GAAAC G 46 PASS INDEL;BAVGPOST=0.998;BRSQ=0.757;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7909;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78989383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5932;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78989507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5107;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78989521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78989543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7612;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78989549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78989557 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6899;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78989594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7053;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78989611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78989790 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78989830 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8240;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78989889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4876;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78989894 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9947;AVGPOST=0.9995;RSQ=0.9503;ERATE=0.0003;THETA=0.0004;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 78990001 . T TA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5929;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78990093 rs36097709 AC A 383 PASS INDEL;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7616;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78990102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8877;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78990122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8101;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78990123 . CT C 392 PASS INDEL;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8301;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78990254 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0119;AVGPOST=0.9993;RSQ=0.9744;ERATE=0.0002;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78990336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78990358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78990413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6102;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78990563 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1063;AVGPOST=0.9913;RSQ=0.9698;ERATE=0.0003;THETA=0.0005;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 78990567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78990588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78990601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9013;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78990635 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0224;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78990646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0966;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 78990649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.6895;ERATE=0.0002;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78990667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0732;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 78990768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4371;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78990772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0734;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 78990803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0755;AVGPOST=0.9988;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 78990875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0159;AVGPOST=0.9970;RSQ=0.9266;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78990906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.701;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7565;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78990942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78990945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0990;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0003;THETA=0.0007;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 78990986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0122;AVGPOST=0.9994;RSQ=0.9775;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 78990987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8109;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78991016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2010;AVGPOST=0.9937;RSQ=0.9847;ERATE=0.0004;THETA=0.0003;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 78991019 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4765;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78991034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0525;AVGPOST=0.9980;RSQ=0.9871;ERATE=0.0003;THETA=0.0002;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 78991116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0973;AVGPOST=0.9989;RSQ=0.9949;ERATE=0.0002;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 78991179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3463;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 78991189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4001;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 78991329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9594;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78991344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9327;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78991350 . CT C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78991372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6068;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78991398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6538;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78991428 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78991479 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1173;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 78991520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78991525 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0165;AVGPOST=0.9983;RSQ=0.9607;ERATE=0.0004;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78991547 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1170;AVGPOST=0.9994;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 78991625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0031;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78991638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7405;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78991706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6206;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78991729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78991761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.4706;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78991826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5644;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78991845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7050;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0005;THETA=0.0012;AC=1541;AN=2184 GT:DS:GL:BD 0.70558608 1
1 78991901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9273;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78991926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.8148;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78991939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9704;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78991970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2850;AVGPOST=0.9972;RSQ=0.9945;ERATE=0.0006;THETA=0.0002;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 78991994 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0038;AVGPOST=0.9972;RSQ=0.7385;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78992025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7782;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78992101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8511;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78992148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0190;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 78992176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9375;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78992194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7180;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78992198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78992220 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78992249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.911;LDAF=0.0248;AVGPOST=0.9988;RSQ=0.9816;ERATE=0.0003;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 78992292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.9089;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78992329 . TA T 1974 PASS INDEL;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0117;AVGPOST=0.9985;RSQ=0.9524;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78992372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6182;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78992374 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.789;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8513;ERATE=0.0004;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78992478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0126;AVGPOST=0.9989;RSQ=0.9658;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 78992499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78992532 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78992581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5993;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78992658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4924;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78992659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78992714 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1351;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 78992781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8711;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78992845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4705;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78992935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6962;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78992963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78993143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78993207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0018;AVGPOST=0.9994;RSQ=0.8794;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78993222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9550;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 78993354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2862;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0007;THETA=0.0002;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 78993396 . CT C 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4630;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78993429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0284;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 78993515 . CT C 44 PASS INDEL;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6720;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78993622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8587;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78993670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78993682 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5517;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78993695 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7105;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=1551;AN=2184 GT:DS:GL:BD 0.71016484 1
1 78993700 . AT A 479 PASS INDEL;BAVGPOST=0.997;BRSQ=0.767;LDAF=0.0058;AVGPOST=0.9949;RSQ=0.6768;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78993830 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5388;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78993947 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2916;AVGPOST=0.9947;RSQ=0.9904;ERATE=0.0010;THETA=0.0018;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 78993954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0048;AVGPOST=0.9985;RSQ=0.8764;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78993994 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.8003;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78994019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9294;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78994096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4481;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78994117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0169;AVGPOST=0.9966;RSQ=0.9282;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78994307 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2869;AVGPOST=0.9963;RSQ=0.9936;ERATE=0.0006;THETA=0.0003;AC=624;AN=2184 GT:DS:GL:BD 0.28571430 0
1 78994436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7286;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78994505 . TTATAGGTC T 1313 PASS INDEL;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8050;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78994554 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0962;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 78994622 . C CTT 556 PASS INDEL;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.0245;AVGPOST=0.9816;RSQ=0.6935;ERATE=0.0073;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 78994624 . T TC 1379 PASS INDEL;BAVGPOST=0.915;BRSQ=0.652;LDAF=0.1373;AVGPOST=0.9051;RSQ=0.6891;ERATE=0.0233;THETA=0.0012;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 78994666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4615;AVGPOST=0.9972;RSQ=0.9954;ERATE=0.0008;THETA=0.0005;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 78994830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5852;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78994868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7468;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 78994874 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7637;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78994919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78994939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8292;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78994964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0964;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 78995005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0509;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 78995006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2880;AVGPOST=0.9972;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 78995096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0134;AVGPOST=0.9993;RSQ=0.9772;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78995125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.7823;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78995151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78995166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78995167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5789;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78995224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9594;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78995260 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.2656;AVGPOST=0.9939;RSQ=0.9901;ERATE=0.0006;THETA=0.0004;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 78995347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.8061;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78995365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7285;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78995459 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7852;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78995496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7081;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=1546;AN=2184 GT:DS:GL:BD 0.70787543 1
1 78995518 . TC T 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8155;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78995542 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0090;AVGPOST=0.9987;RSQ=0.9538;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 78995564 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0053;AVGPOST=0.9996;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78995651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 78995657 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78995659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7776;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78995861 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4409;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=962;AN=2184 GT:DS:GL:BD 0.44047618 0
1 78995881 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.880;LDAF=0.0237;AVGPOST=0.9964;RSQ=0.9398;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 78995884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.4598;AVGPOST=0.9964;RSQ=0.9943;ERATE=0.0006;THETA=0.0002;AC=1002;AN=2184 GT:DS:GL:BD 0.45879120 0
1 78996000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0147;AVGPOST=0.9993;RSQ=0.9777;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78996021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6831;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78996047 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8560;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78996083 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0266;AVGPOST=0.9994;RSQ=0.9911;ERATE=0.0003;THETA=0.0002;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78996159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4384;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0004;THETA=0.0002;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 78996221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7776;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78996236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9316;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78996267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0971;AVGPOST=0.9985;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 78996302 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0268;AVGPOST=0.9988;RSQ=0.9829;ERATE=0.0004;THETA=0.0007;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78996366 . T TAGG 1737 PASS INDEL;BAVGPOST=0.979;BRSQ=0.804;LDAF=0.0557;AVGPOST=0.9942;RSQ=0.9543;ERATE=0.0005;THETA=0.0015;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 78996372 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78996408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7884;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78996412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78996413 . G GT 462 PASS INDEL;BAVGPOST=0.997;BRSQ=0.736;LDAF=0.0050;AVGPOST=0.9960;RSQ=0.6465;ERATE=0.0008;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 78996488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0134;AVGPOST=0.9994;RSQ=0.9821;ERATE=0.0003;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78996566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8350;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78996609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0234;AVGPOST=0.9995;RSQ=0.9907;ERATE=0.0003;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78996617 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0263;AVGPOST=0.9988;RSQ=0.9817;ERATE=0.0004;THETA=0.0015;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78996650 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1049;AVGPOST=0.9978;RSQ=0.9907;ERATE=0.0004;THETA=0.0007;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 78996682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.494;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.4840;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78996735 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.966;LDAF=0.0871;AVGPOST=0.9907;RSQ=0.9583;ERATE=0.0007;THETA=0.0007;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 78996753 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.489;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6355;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78996758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0133;AVGPOST=0.9992;RSQ=0.9756;ERATE=0.0004;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78996846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0242;AVGPOST=0.9989;RSQ=0.9789;ERATE=0.0003;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 78996964 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5794;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78997022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0236;AVGPOST=0.9994;RSQ=0.9871;ERATE=0.0003;THETA=0.0012;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 78997149 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6781;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78997256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78997267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6245;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78997318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0246;AVGPOST=0.9979;RSQ=0.9669;ERATE=0.0004;THETA=0.0033;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 78997328 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0267;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0010;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 78997500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8804;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78997680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.6711;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78997699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.951;LDAF=0.3242;AVGPOST=0.9827;RSQ=0.9737;ERATE=0.0011;THETA=0.0005;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 78997843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0153;AVGPOST=0.9959;RSQ=0.8853;ERATE=0.0008;THETA=0.0016;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78997925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.739;LDAF=0.0831;AVGPOST=0.9624;RSQ=0.8109;ERATE=0.0010;THETA=0.0008;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 78997996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9978;RSQ=0.9277;ERATE=0.0005;THETA=0.0015;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 78998000 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0164;AVGPOST=0.9991;RSQ=0.9731;ERATE=0.0004;THETA=0.0011;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 78998075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9793;ERATE=0.0004;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78998079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0069;AVGPOST=0.9984;RSQ=0.9000;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 78998103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7946;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78998121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.964;LDAF=0.0707;AVGPOST=0.9889;RSQ=0.9360;ERATE=0.0020;THETA=0.0009;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 78998166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0036;AVGPOST=0.9977;RSQ=0.7450;ERATE=0.0007;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 78998202 . A AT 137 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8026;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78998304 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8838;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 78998428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9990;RSQ=0.9596;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78998446 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78998750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78998794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0224;AVGPOST=0.9990;RSQ=0.9825;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 78998846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9347;ERATE=0.0004;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 78998868 . AG A 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.524;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.5541;ERATE=0.0007;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78998981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.789;LDAF=0.0149;AVGPOST=0.9951;RSQ=0.8527;ERATE=0.0008;THETA=0.0031;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 78999000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7795;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 78999162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7890;ERATE=0.0004;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78999264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4723;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 78999332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0059;AVGPOST=0.9990;RSQ=0.9285;ERATE=0.0006;THETA=0.0022;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 78999379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9293;ERATE=0.0005;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78999392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5563;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78999468 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0481;AVGPOST=0.9974;RSQ=0.9790;ERATE=0.0005;THETA=0.0007;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 78999593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9512;ERATE=0.0005;THETA=0.0021;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 78999655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6416;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78999685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0149;AVGPOST=0.9989;RSQ=0.9681;ERATE=0.0005;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 78999765 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.2230;AVGPOST=0.9908;RSQ=0.9835;ERATE=0.0008;THETA=0.0010;AC=487;AN=2184 GT:DS:GL:BD 0.22298534 0
1 78999814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9266;ERATE=0.0005;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 78999815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0077;AVGPOST=0.9979;RSQ=0.8818;ERATE=0.0006;THETA=0.0021;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 78999832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0020;AVGPOST=0.9972;RSQ=0.4839;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 78999868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4013;ERATE=0.0007;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78999916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4426;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 78999938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7764;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79000170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4259;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79000192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1305;AVGPOST=0.9935;RSQ=0.9778;ERATE=0.0008;THETA=0.0009;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 79000258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0270;AVGPOST=0.9955;RSQ=0.9407;ERATE=0.0007;THETA=0.0013;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79000271 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0177;AVGPOST=0.9983;RSQ=0.9591;ERATE=0.0005;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79000275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8007;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79000285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1213;AVGPOST=0.9958;RSQ=0.9837;ERATE=0.0004;THETA=0.0011;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 79000466 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6799;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79000517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5341;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79000645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0149;AVGPOST=0.9991;RSQ=0.9762;ERATE=0.0003;THETA=0.0039;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79000664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0142;AVGPOST=0.9993;RSQ=0.9799;ERATE=0.0004;THETA=0.0013;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79000685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0023;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79000696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79000809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79000842 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9191;ERATE=0.0004;THETA=0.0050;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79000845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0157;AVGPOST=0.9983;RSQ=0.9590;ERATE=0.0015;THETA=0.0031;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79000855 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0128;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79001069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9773;ERATE=0.0003;THETA=0.0074;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79001070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9426;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79001236 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0394;AVGPOST=0.9986;RSQ=0.9844;ERATE=0.0004;THETA=0.0006;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 79001373 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9992;RSQ=0.9689;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79001412 . A AG 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7642;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79001438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0571;AVGPOST=0.9989;RSQ=0.9933;ERATE=0.0003;THETA=0.0003;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 79001448 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79001524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4946;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79001619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8461;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79001661 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7763;ERATE=0.0009;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79001683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1106;AVGPOST=0.9976;RSQ=0.9897;ERATE=0.0005;THETA=0.0036;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 79001740 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0389;AVGPOST=0.9997;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 79001749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7337;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79001820 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.776;LDAF=0.0104;AVGPOST=0.9940;RSQ=0.7604;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79002087 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5315;AVGPOST=0.9947;RSQ=0.9922;ERATE=0.0007;THETA=0.0007;AC=1162;AN=2184 GT:DS:GL:BD 0.53205127 1
1 79002092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7661;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79002463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7117;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79002514 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2461;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 79002675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8381;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79002684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79002784 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79002881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0160;AVGPOST=0.9985;RSQ=0.9684;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79002885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79002919 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79002922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7749;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79002938 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79002972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0133;AVGPOST=0.9982;RSQ=0.9467;ERATE=0.0006;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79002986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7420;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79003052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5764;AVGPOST=0.9963;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 79003108 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0035;AVGPOST=0.9978;RSQ=0.7681;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79003121 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9520;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79003162 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0025;AVGPOST=0.9972;RSQ=0.5478;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79003237 . C CA 20684 PASS INDEL;BAVGPOST=0.976;BRSQ=0.400;LDAF=0.9543;AVGPOST=0.9445;RSQ=0.4767;ERATE=0.0070;THETA=0.0009;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 79003283 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.588;LDAF=0.0690;AVGPOST=0.9208;RSQ=0.4986;ERATE=0.0093;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 79003305 . G GC 8205 PASS INDEL;BAVGPOST=0.951;BRSQ=0.241;LDAF=0.9186;AVGPOST=0.8743;RSQ=0.3319;ERATE=0.0122;THETA=0.0010;AC=2106;AN=2184 GT:DS:GL:BD 0.96428573 1
1 79003310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.564;LDAF=0.0078;AVGPOST=0.9894;RSQ=0.4674;ERATE=0.0009;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79003450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.984;LDAF=0.5719;AVGPOST=0.9913;RSQ=0.9882;ERATE=0.0005;THETA=0.0004;AC=1248;AN=2184 GT:DS:GL:BD 0.57142860 1
1 79003465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.938;LDAF=0.0327;AVGPOST=0.9936;RSQ=0.9238;ERATE=0.0005;THETA=0.0038;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 79003647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9786;ERATE=0.0003;THETA=0.0023;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79003652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0241;AVGPOST=0.9992;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 79003660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7788;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79003661 . A ACG 2999 PASS INDEL;BAVGPOST=0.992;BRSQ=0.826;LDAF=0.0287;AVGPOST=0.9961;RSQ=0.9391;ERATE=0.0007;THETA=0.0014;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 79003785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.484;LDAF=0.0169;AVGPOST=0.9814;RSQ=0.5698;ERATE=0.0050;THETA=0.0021;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79003796 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.581;LDAF=0.0305;AVGPOST=0.9669;RSQ=0.5744;ERATE=0.0061;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 79003803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0098;AVGPOST=0.9982;RSQ=0.9388;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79003835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79003903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.807;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7520;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79003924 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0182;AVGPOST=0.9984;RSQ=0.9640;ERATE=0.0003;THETA=0.0012;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 79004018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6595;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79004104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0253;AVGPOST=0.9952;RSQ=0.9263;ERATE=0.0004;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 79004123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79004137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0176;AVGPOST=0.9994;RSQ=0.9840;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79004236 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9316;ERATE=0.0003;THETA=0.0047;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79004266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79004331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5875;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79004367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.8727;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79004382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9237;ERATE=0.0004;THETA=0.0022;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79004432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9327;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79004532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79004533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1493;AVGPOST=0.9963;RSQ=0.9892;ERATE=0.0003;THETA=0.0007;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 79004543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.0609;AVGPOST=0.9966;RSQ=0.9823;ERATE=0.0010;THETA=0.0006;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 79004626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79004663 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9072;ERATE=0.0003;THETA=0.0043;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79004743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79004822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6463;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79004845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7835;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79004879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.7888;AVGPOST=0.9933;RSQ=0.9857;ERATE=0.0005;THETA=0.0187;AC=1721;AN=2184 GT:DS:GL:BD 0.78800368 1
1 79004938 . G GAC 9048 PASS INDEL;BAVGPOST=0.984;BRSQ=0.967;LDAF=0.2207;AVGPOST=0.9856;RSQ=0.9720;ERATE=0.0004;THETA=0.0013;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 79005088 rs35301411 C CAA 41977 PASS INDEL;BAVGPOST=0.984;BRSQ=0.967;LDAF=0.2210;AVGPOST=0.9857;RSQ=0.9723;ERATE=0.0003;THETA=0.0247;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 79005090 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0086;AVGPOST=0.9988;RSQ=0.9440;ERATE=0.0006;THETA=0.0034;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79005208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0162;AVGPOST=0.9977;RSQ=0.9410;ERATE=0.0003;THETA=0.0074;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79005258 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0123;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79005290 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0097;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79005318 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79005333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.7193;AVGPOST=0.9914;RSQ=0.9861;ERATE=0.0004;THETA=0.0053;AC=1573;AN=2184 GT:DS:GL:BD 0.72023809 1
1 79005337 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.7144;AVGPOST=0.9826;RSQ=0.9717;ERATE=0.0037;THETA=0.0031;AC=1566;AN=2184 GT:DS:GL:BD 0.71703297 1
1 79005354 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79005449 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5582;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79005469 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.962;LDAF=0.0359;AVGPOST=0.9961;RSQ=0.9605;ERATE=0.0006;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 79005478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5797;ERATE=0.0004;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79005575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.971;LDAF=0.3693;AVGPOST=0.9766;RSQ=0.9666;ERATE=0.0045;THETA=0.0010;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 79005577 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0136;AVGPOST=0.9974;RSQ=0.9246;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79005582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.969;LDAF=0.0529;AVGPOST=0.9948;RSQ=0.9649;ERATE=0.0006;THETA=0.0088;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 79005586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9308;ERATE=0.0003;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79005719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79005773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9993;AVGPOST=0.9985;RSQ=0.2051;ERATE=0.0003;THETA=0.0049;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 79005780 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2813;AVGPOST=0.9944;RSQ=0.9912;ERATE=0.0004;THETA=0.0035;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 79005787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.6334;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79005827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4676;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79005885 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0006;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 79005908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.6981;ERATE=0.0004;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79006012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79006037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6694;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79006111 rs70984075 G GCCTCCCTC 6384 PASS INDEL;BAVGPOST=0.673;BRSQ=0.252;LDAF=0.3427;AVGPOST=0.6542;RSQ=0.3277;ERATE=0.0789;THETA=0.0021;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 79006320 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0173;AVGPOST=0.9880;RSQ=0.7618;ERATE=0.0006;THETA=0.0030;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79006333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9994;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79006349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.1164;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79006446 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7872;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79006460 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8859;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79006595 . A AT 10 PASS INDEL;BAVGPOST=0.987;BRSQ=0.070;LDAF=0.0602;AVGPOST=0.9128;RSQ=0.3960;ERATE=0.0033;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 79006773 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79006827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6901;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79006889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5413;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79006910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5406;AVGPOST=0.9963;RSQ=0.9953;ERATE=0.0005;THETA=0.0007;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 79007045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0074;AVGPOST=0.9973;RSQ=0.8487;ERATE=0.0005;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79007123 . TTGAG T 3919 PASS INDEL;BAVGPOST=0.997;BRSQ=0.947;LDAF=0.0258;AVGPOST=0.9975;RSQ=0.9637;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79007286 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79007423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79007487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6145;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79007505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0117;AVGPOST=0.9988;RSQ=0.9578;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79007681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7966;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79007883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0241;AVGPOST=0.9992;RSQ=0.9864;ERATE=0.0003;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 79007884 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79007899 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1285;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0007;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 79007965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2685;ERATE=0.0003;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79008147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79008181 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79008212 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79008335 . T TC 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5361;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79008361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9146;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79008672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9438;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79008916 . A AT 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7037;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79009024 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8442;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79009073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79009083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8338;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79009166 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6377;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79009835 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1288;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 79009876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79010098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6866;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79010268 . GCCAGAGAA G 636 PASS INDEL;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0041;AVGPOST=0.9974;RSQ=0.8020;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79010342 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79010366 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9253;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79010378 . TA T 275 PASS INDEL;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8633;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79010447 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79010457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9721;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79010486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0089;AVGPOST=0.9986;RSQ=0.9431;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79010490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79010534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7634;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79010538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8152;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79010619 . ACT A 36 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6658;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79010627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7314;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79010718 . GC G 1663 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0139;AVGPOST=0.9984;RSQ=0.9489;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79010737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79010779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79010786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8935;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79010816 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0185;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 79010983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9979;RSQ=0.9607;ERATE=0.0003;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 79011047 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5517;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79011105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79011106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79011142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0009;AVGPOST=0.9985;RSQ=0.4319;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79011181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79011222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79011285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9022;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79011378 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.6283;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79011396 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5350;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79011404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79011405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8402;ERATE=0.0014;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79011406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.8093;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79011426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0165;AVGPOST=0.9989;RSQ=0.9731;ERATE=0.0004;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79011449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0187;AVGPOST=0.9990;RSQ=0.9797;ERATE=0.0004;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79011472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9160;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79011477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0183;AVGPOST=0.9989;RSQ=0.9783;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 79011509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.516;LDAF=0.0060;AVGPOST=0.9920;RSQ=0.5248;ERATE=0.0027;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79011525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0171;AVGPOST=0.9997;RSQ=0.9908;ERATE=0.0003;THETA=0.0023;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79011529 . CAT C 1200 PASS INDEL;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0040;AVGPOST=0.9981;RSQ=0.8237;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79011534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.786;LDAF=0.0097;AVGPOST=0.9952;RSQ=0.7999;ERATE=0.0010;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79011542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0582;AVGPOST=0.9986;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 79011556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0749;AVGPOST=0.9988;RSQ=0.9939;ERATE=0.0004;THETA=0.0012;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 79011563 . GCACATACA G 777 PASS INDEL;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7053;ERATE=0.0011;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79011583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1687;AVGPOST=0.9897;RSQ=0.9769;ERATE=0.0011;THETA=0.0005;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 79011601 . GCA G 8885 PASS INDEL;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0583;AVGPOST=0.9982;RSQ=0.9896;ERATE=0.0004;THETA=0.0005;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 79011631 . TAC T 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79011646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.517;LDAF=0.0142;AVGPOST=0.9857;RSQ=0.6348;ERATE=0.0061;THETA=0.0018;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79011652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79011803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79011841 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9321;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79011961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0297;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 79011985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9292;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79011987 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0633;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0004;THETA=0.0008;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 79012058 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8718;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79012076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0631;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 79012119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0335;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0011;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 79012126 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6305;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79012136 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0199;AVGPOST=0.9994;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79012201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0622;AVGPOST=0.9970;RSQ=0.9844;ERATE=0.0004;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 79012221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8235;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79012334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7033;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79012345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0216;AVGPOST=0.9977;RSQ=0.9586;ERATE=0.0004;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 79012435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8541;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79012456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.944;LDAF=0.2392;AVGPOST=0.9846;RSQ=0.9709;ERATE=0.0006;THETA=0.0006;AC=530;AN=2184 GT:DS:GL:BD 0.24267399 0
1 79012477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.940;LDAF=0.2434;AVGPOST=0.9862;RSQ=0.9734;ERATE=0.0010;THETA=0.0008;AC=537;AN=2184 GT:DS:GL:BD 0.24587911 0
1 79012478 . CT C 94 PASS INDEL;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0055;AVGPOST=0.9961;RSQ=0.7095;ERATE=0.0007;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79012490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0050;AVGPOST=0.9989;RSQ=0.8955;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79012568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9994;RSQ=0.9819;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79012605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0033;AVGPOST=0.9981;RSQ=0.7796;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79012614 . C CA 1502 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0172;AVGPOST=0.9987;RSQ=0.9671;ERATE=0.0004;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79012639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.632;LDAF=0.0035;AVGPOST=0.9960;RSQ=0.5864;ERATE=0.0011;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79012680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9376;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79012733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9186;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79012734 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4004;AVGPOST=0.9896;RSQ=0.9843;ERATE=0.0006;THETA=0.0038;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 79012750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79012769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0335;AVGPOST=0.9995;RSQ=0.9934;ERATE=0.0003;THETA=0.0006;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 79012803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.907;LDAF=0.3446;AVGPOST=0.9426;RSQ=0.9105;ERATE=0.0036;THETA=0.0008;AC=753;AN=2184 GT:DS:GL:BD 0.34478021 0
1 79012822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.787;LDAF=0.0096;AVGPOST=0.9938;RSQ=0.7404;ERATE=0.0007;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79012863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9752;ERATE=0.0004;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79012962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6186;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79013021 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0004;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79013046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0030;AVGPOST=0.9973;RSQ=0.6197;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79013174 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9179;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79013292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9676;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79013340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9079;ERATE=0.0005;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79013359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4968;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79013372 . G GT 6 PASS INDEL;BAVGPOST=0.996;BRSQ=0.583;LDAF=0.0039;AVGPOST=0.9957;RSQ=0.5584;ERATE=0.0009;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79013501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0194;AVGPOST=0.9988;RSQ=0.9712;ERATE=0.0003;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 79013505 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5310;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79013538 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5342;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79013669 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9605;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79013676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9995;RSQ=0.9897;ERATE=0.0004;THETA=0.0044;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 79013806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.746;LDAF=0.0070;AVGPOST=0.9975;RSQ=0.8384;ERATE=0.0006;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79013890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7048;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79013901 . AAGG A 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4115;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79013905 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6145;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79013913 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.922;LDAF=0.1734;AVGPOST=0.9711;RSQ=0.9240;ERATE=0.0045;THETA=0.0030;AC=366;AN=2184 GT:DS:GL:BD 0.16758242 0
1 79013953 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0258;AVGPOST=0.9984;RSQ=0.9748;ERATE=0.0004;THETA=0.0012;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79013993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5799;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79014008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9567;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79014024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0029;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79014039 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0003;THETA=0.0025;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79014067 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79014119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.766;LDAF=0.0041;AVGPOST=0.9982;RSQ=0.8176;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79014208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.670;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5540;ERATE=0.0009;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79014212 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79014301 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79014352 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.973;LDAF=0.8661;AVGPOST=0.9917;RSQ=0.9723;ERATE=0.0005;THETA=0.0007;AC=1892;AN=2184 GT:DS:GL:BD 0.86630034 1
1 79014369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0198;AVGPOST=0.9997;RSQ=0.9933;ERATE=0.0003;THETA=0.0024;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79014473 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4869;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79014547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0197;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0004;THETA=0.0009;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79014665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0029;AVGPOST=0.9967;RSQ=0.5458;ERATE=0.0010;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79014763 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.412;LDAF=0.9759;AVGPOST=0.9670;RSQ=0.4726;ERATE=0.0060;THETA=0.0007;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 79014772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4765;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79014822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9249;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79014865 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0178;AVGPOST=0.9991;RSQ=0.9753;ERATE=0.0005;THETA=0.0021;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79014886 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79014919 . CA C 1824 PASS INDEL;BAVGPOST=0.983;BRSQ=0.726;LDAF=0.0269;AVGPOST=0.9846;RSQ=0.7875;ERATE=0.0008;THETA=0.0007;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79014937 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0043;AVGPOST=0.9993;RSQ=0.9405;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79014940 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79014987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79015041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.9198;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79015048 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79015057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9382;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79015059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79015152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0076;AVGPOST=0.9983;RSQ=0.9187;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79015166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79015199 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5367;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79015200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79015263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79015272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79015289 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79015290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7860;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79015327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9611;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79015357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0065;AVGPOST=0.9991;RSQ=0.9561;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79015378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.7986;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79015414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79015419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9269;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79015420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79015432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79015479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.892;LDAF=0.0134;AVGPOST=0.9964;RSQ=0.9005;ERATE=0.0005;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79015483 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0080;AVGPOST=0.9979;RSQ=0.8800;ERATE=0.0006;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79015569 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79015591 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0219;AVGPOST=0.9959;RSQ=0.9350;ERATE=0.0006;THETA=0.0027;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 79015611 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0208;AVGPOST=0.9978;RSQ=0.9681;ERATE=0.0003;THETA=0.0015;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 79015640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5729;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79015661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0248;AVGPOST=0.9992;RSQ=0.9884;ERATE=0.0004;THETA=0.0010;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 79015748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79015762 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79015953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0180;AVGPOST=0.9995;RSQ=0.9866;ERATE=0.0004;THETA=0.0037;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 79015966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0256;AVGPOST=0.9982;RSQ=0.9783;ERATE=0.0004;THETA=0.0042;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79015987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9557;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79016058 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9226;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79016077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7087;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79016190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9590;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79016229 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9746;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79016385 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.738;LDAF=0.0093;AVGPOST=0.9956;RSQ=0.8115;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79016480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0093;AVGPOST=0.9925;RSQ=0.6590;ERATE=0.0017;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79016530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.609;LDAF=0.0088;AVGPOST=0.9932;RSQ=0.7299;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79016537 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1264;AVGPOST=0.9971;RSQ=0.9893;ERATE=0.0005;THETA=0.0017;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 79016656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9543;ERATE=0.0006;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79016670 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79016675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0072;AVGPOST=0.9985;RSQ=0.9126;ERATE=0.0006;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79016732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9770;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79016905 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8524;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79016915 rs34946937 GT G 34001 PASS INDEL;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4133;AVGPOST=0.9943;RSQ=0.9909;ERATE=0.0007;THETA=0.0009;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 79016985 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9901;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79016993 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6864;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79017196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79017211 . CTAAGGA C 276 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6326;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79017325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79017375 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5172;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79017391 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79017479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79017531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4154;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=907;AN=2184 GT:DS:GL:BD 0.41529304 0
1 79017556 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79017558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.5719;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79017582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79017678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79017805 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9790;ERATE=0.0004;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79017846 . AG A 2200 PASS INDEL;BAVGPOST=0.829;BRSQ=0.653;LDAF=0.2619;AVGPOST=0.8257;RSQ=0.6812;ERATE=0.0197;THETA=0.0007;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 79017872 rs3215946 GA G 40265 PASS INDEL;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5612;AVGPOST=0.9936;RSQ=0.9899;ERATE=0.0005;THETA=0.0027;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 79017874 . AT A 887 PASS INDEL;BAVGPOST=0.839;BRSQ=0.587;LDAF=0.2194;AVGPOST=0.8266;RSQ=0.6387;ERATE=0.0162;THETA=0.0009;AC=424;AN=2184 GT:DS:GL:BD 0.19413920 0
1 79017880 . C CCT 14604 PASS INDEL;BAVGPOST=0.970;BRSQ=0.923;LDAF=0.1872;AVGPOST=0.9433;RSQ=0.8815;ERATE=0.0123;THETA=0.0002;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 79017899 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.951;LDAF=0.1522;AVGPOST=0.9739;RSQ=0.9374;ERATE=0.0065;THETA=0.0004;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 79017904 . GTA G 35187 PASS INDEL;BAVGPOST=0.907;BRSQ=0.497;LDAF=0.8612;AVGPOST=0.8537;RSQ=0.5005;ERATE=0.0359;THETA=0.0004;AC=1968;AN=2184 GT:DS:GL:BD 0.90109891 1
1 79017944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79017960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79018032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79018043 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7100;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79018096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8934;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79018108 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9416;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79018278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6072;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79018286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8280;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79018293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4745;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79018328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0574;AVGPOST=0.9975;RSQ=0.9829;ERATE=0.0003;THETA=0.0032;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 79018366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9996;RSQ=0.9676;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79018377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0055;AVGPOST=0.9994;RSQ=0.9596;ERATE=0.0004;THETA=0.0022;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79018730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6373;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79018748 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79018840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7442;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79018861 . AAG A 748 PASS INDEL;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0055;AVGPOST=0.9979;RSQ=0.8560;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79018922 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9577;ERATE=0.0004;THETA=0.0036;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79018928 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0076;AVGPOST=0.9882;RSQ=0.4146;ERATE=0.0020;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79018979 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79019142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79019162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6571;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79019165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79019239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79019439 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79019572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0081;AVGPOST=0.9970;RSQ=0.8432;ERATE=0.0005;THETA=0.0028;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79019599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0068;AVGPOST=0.9986;RSQ=0.9090;ERATE=0.0012;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79019775 . ATT A 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7147;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79019886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7837;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79020064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79020083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79020128 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79020198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5409;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79020377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79020418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79020422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0191;AVGPOST=0.9988;RSQ=0.9755;ERATE=0.0005;THETA=0.0013;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79020573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6160;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79020883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0052;AVGPOST=0.9979;RSQ=0.8494;ERATE=0.0003;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79020908 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7799;ERATE=0.0004;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79020941 rs5772418 T TG 35148 PASS INDEL;BAVGPOST=0.976;BRSQ=0.959;LDAF=0.4162;AVGPOST=0.9749;RSQ=0.9656;ERATE=0.0006;THETA=0.0007;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 79020962 . A ACTCT 49067 PASS INDEL;BAVGPOST=0.966;BRSQ=0.941;LDAF=0.4144;AVGPOST=0.9720;RSQ=0.9609;ERATE=0.0006;THETA=0.0005;AC=909;AN=2184 GT:DS:GL:BD 0.41620880 0
1 79020964 rs35454547 T TC 2839 PASS INDEL;BAVGPOST=0.881;BRSQ=0.786;LDAF=0.3498;AVGPOST=0.8940;RSQ=0.8530;ERATE=0.0027;THETA=0.0007;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 79020966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7834;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79020976 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79021043 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.5580;ERATE=0.0017;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79021202 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0050;AVGPOST=0.9986;RSQ=0.8885;ERATE=0.0004;THETA=0.0025;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79021204 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6192;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79021206 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0015;THETA=0.0044;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79021649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7735;ERATE=0.0003;THETA=0.0050;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79021657 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6885;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79021717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79021841 . TAC T 1537 PASS INDEL;BAVGPOST=0.980;BRSQ=0.920;LDAF=0.0978;AVGPOST=0.9869;RSQ=0.9530;ERATE=0.0027;THETA=0.0010;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 79021861 . CACAA C 20797 PASS INDEL;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1013;AVGPOST=0.9973;RSQ=0.9907;ERATE=0.0004;THETA=0.0024;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 79021867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9310;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79021998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79022000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0155;AVGPOST=0.9972;RSQ=0.9277;ERATE=0.0006;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79022004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4262;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79022176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9839;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79022492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0088;AVGPOST=0.9985;RSQ=0.9401;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79022563 . GT G 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.5121;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79022577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79022753 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1020;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0009;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 79022801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1029;AVGPOST=0.9984;RSQ=0.9942;ERATE=0.0005;THETA=0.0007;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 79022818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79022893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1020;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0004;THETA=0.0012;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 79022895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79022996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79023062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6220;ERATE=0.0005;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79023147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7230;ERATE=0.0005;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79023335 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9866;ERATE=0.0003;THETA=0.0009;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79023346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79023351 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79023584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1324;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0004;THETA=0.0027;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 79023594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0080;AVGPOST=0.9977;RSQ=0.8864;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79023692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0063;AVGPOST=0.9985;RSQ=0.9070;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79023764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0141;AVGPOST=0.9993;RSQ=0.9784;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79023774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1494;AVGPOST=0.9978;RSQ=0.9924;ERATE=0.0004;THETA=0.0029;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 79023783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7294;ERATE=0.0004;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79023902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1694;AVGPOST=0.9969;RSQ=0.9909;ERATE=0.0006;THETA=0.0032;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 79023909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79024172 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4770;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79024191 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79024296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0003;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 79024343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79024352 . GGTA G 2683 PASS INDEL;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0218;AVGPOST=0.9990;RSQ=0.9792;ERATE=0.0004;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79024379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5522;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79024508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6628;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79024542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8334;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79024659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1629;AVGPOST=0.9951;RSQ=0.9854;ERATE=0.0005;THETA=0.0006;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 79024677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79024786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0033;AVGPOST=0.9975;RSQ=0.7063;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79024862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6796;ERATE=0.0006;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79025006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4672;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79025009 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.946;LDAF=0.0500;AVGPOST=0.9949;RSQ=0.9582;ERATE=0.0006;THETA=0.0041;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 79025018 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0060;AVGPOST=0.9963;RSQ=0.7685;ERATE=0.0006;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79025109 . G GAGT 81 PASS INDEL;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0054;AVGPOST=0.9936;RSQ=0.5095;ERATE=0.0010;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79025114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0547;AVGPOST=0.9949;RSQ=0.9624;ERATE=0.0006;THETA=0.0008;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 79025129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.920;LDAF=0.0168;AVGPOST=0.9963;RSQ=0.9189;ERATE=0.0006;THETA=0.0010;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79025209 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.4890;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79025215 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0045;AVGPOST=0.9984;RSQ=0.8649;ERATE=0.0004;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79025260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0069;AVGPOST=0.9983;RSQ=0.8906;ERATE=0.0003;THETA=0.0039;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79025294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8751;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79025344 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0052;AVGPOST=0.9992;RSQ=0.9278;ERATE=0.0005;THETA=0.0024;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79025353 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0063;AVGPOST=0.9990;RSQ=0.9328;ERATE=0.0004;THETA=0.0056;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79025368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6789;ERATE=0.0004;THETA=0.0071;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79025448 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9051;ERATE=0.0004;THETA=0.0024;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79025470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79025522 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.5972;AVGPOST=0.9836;RSQ=0.9762;ERATE=0.0015;THETA=0.0048;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 79025600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5752;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79025621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.6445;AVGPOST=0.9877;RSQ=0.9813;ERATE=0.0020;THETA=0.0011;AC=1407;AN=2184 GT:DS:GL:BD 0.64423078 1
1 79025639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7023;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79025650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9797;ERATE=0.0003;THETA=0.0055;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79025658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6508;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79025670 . GAT G 36 PASS INDEL;BAVGPOST=0.996;BRSQ=0.618;LDAF=0.0035;AVGPOST=0.9957;RSQ=0.5045;ERATE=0.0009;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79025800 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7059;ERATE=0.0005;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79025805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79025842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7921;ERATE=0.0003;THETA=0.0074;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79025928 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0269;AVGPOST=0.9976;RSQ=0.9678;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 79025970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8411;ERATE=0.0003;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79026123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7652;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79026135 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5941;AVGPOST=0.9955;RSQ=0.9937;ERATE=0.0005;THETA=0.0005;AC=1298;AN=2184 GT:DS:GL:BD 0.59432232 1
1 79026171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5108;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79026289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3167;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 79026355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1939;AVGPOST=0.9967;RSQ=0.9927;ERATE=0.0003;THETA=0.0004;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 79026406 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8132;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79026439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0592;AVGPOST=0.9950;RSQ=0.9672;ERATE=0.0003;THETA=0.0011;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 79026466 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79026469 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8867;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79026475 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.9100;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79026491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5405;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79026503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0394;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0006;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 79026563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0398;AVGPOST=0.9961;RSQ=0.9613;ERATE=0.0008;THETA=0.0011;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 79026727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5795;ERATE=0.0004;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79026937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0043;AVGPOST=0.9950;RSQ=0.5711;ERATE=0.0004;THETA=0.0032;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79026994 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.4468;ERATE=0.0007;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79027002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0112;AVGPOST=0.9980;RSQ=0.9370;ERATE=0.0004;THETA=0.0031;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79027042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8199;ERATE=0.0004;THETA=0.0016;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79027071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79027072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0161;AVGPOST=0.9971;RSQ=0.9272;ERATE=0.0006;THETA=0.0018;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79027227 . GGA G 6675 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0695;AVGPOST=0.9979;RSQ=0.9882;ERATE=0.0004;THETA=0.0026;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 79027261 . AGT A 1022 PASS INDEL;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0700;AVGPOST=0.9967;RSQ=0.9796;ERATE=0.0005;THETA=0.0039;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 79027265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0687;AVGPOST=0.9982;RSQ=0.9896;ERATE=0.0005;THETA=0.0033;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 79027308 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.945;LDAF=0.2400;AVGPOST=0.9652;RSQ=0.9316;ERATE=0.0008;THETA=0.0010;AC=514;AN=2184 GT:DS:GL:BD 0.23534799 0
1 79027345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0759;AVGPOST=0.9965;RSQ=0.9813;ERATE=0.0007;THETA=0.0010;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 79027361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8545;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79027417 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79027425 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8742;ERATE=0.0004;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79027448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1353;AVGPOST=0.9977;RSQ=0.9939;ERATE=0.0003;THETA=0.0012;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 79027488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79027514 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0104;AVGPOST=0.9984;RSQ=0.9339;ERATE=0.0005;THETA=0.0017;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79027533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6490;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79027627 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.759;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7848;ERATE=0.0007;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79027659 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8598;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79027674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5068;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79027706 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6240;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79027719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.866;LDAF=0.0095;AVGPOST=0.9957;RSQ=0.8273;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79027766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7388;ERATE=0.0005;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79027928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8844;ERATE=0.0004;THETA=0.0021;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79028000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4591;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79028036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79028113 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1373;AVGPOST=0.9963;RSQ=0.9892;ERATE=0.0010;THETA=0.0014;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 79028178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79028226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0099;AVGPOST=0.9992;RSQ=0.9632;ERATE=0.0005;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79028227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5403;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79028314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9021;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79028382 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.9155;ERATE=0.0004;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79028457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79028469 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0003;AVGPOST=0.9997;RSQ=0.6564;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79028565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0412;AVGPOST=0.9986;RSQ=0.9882;ERATE=0.0005;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 79028605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79028661 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0311;AVGPOST=0.9990;RSQ=0.9889;ERATE=0.0003;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 79028667 rs112965339 AG A 3163 PASS INDEL;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0294;AVGPOST=0.9968;RSQ=0.9624;ERATE=0.0005;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 79028670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0098;AVGPOST=0.9993;RSQ=0.9647;ERATE=0.0005;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79028675 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0591;AVGPOST=0.9981;RSQ=0.9882;ERATE=0.0003;THETA=0.0014;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 79028694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79028699 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0685;AVGPOST=0.9989;RSQ=0.9947;ERATE=0.0003;THETA=0.0008;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 79028728 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9547;ERATE=0.0004;THETA=0.0035;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79028751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79028812 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5084;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79028862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0142;AVGPOST=0.9969;RSQ=0.9173;ERATE=0.0004;THETA=0.0024;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79028873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5320;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79028966 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.934;LDAF=0.0498;AVGPOST=0.9948;RSQ=0.9614;ERATE=0.0005;THETA=0.0015;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 79028983 . T TG 89 PASS INDEL;BAVGPOST=0.996;BRSQ=0.821;LDAF=0.0112;AVGPOST=0.9926;RSQ=0.7339;ERATE=0.0006;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79028989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1355;AVGPOST=0.9976;RSQ=0.9929;ERATE=0.0004;THETA=0.0009;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 79029087 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6803;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79029101 . TACAA T 5432 PASS INDEL;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0402;AVGPOST=0.9983;RSQ=0.9832;ERATE=0.0004;THETA=0.0014;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 79029186 . TG T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4633;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79029236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0407;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0014;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 79029268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79029382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.946;LDAF=0.2207;AVGPOST=0.9714;RSQ=0.9389;ERATE=0.0012;THETA=0.0020;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 79029428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0380;AVGPOST=0.9988;RSQ=0.9882;ERATE=0.0003;THETA=0.0017;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 79029498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5083;ERATE=0.0007;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79029783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7461;ERATE=0.0004;THETA=0.0075;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79029829 rs112373603 G GT 47053 PASS INDEL;BAVGPOST=0.984;BRSQ=0.316;LDAF=0.9753;AVGPOST=0.9638;RSQ=0.3911;ERATE=0.0051;THETA=0.0014;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 79029944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0149;AVGPOST=0.9982;RSQ=0.9535;ERATE=0.0011;THETA=0.0019;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79030033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0004;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79030048 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.700;LDAF=0.0074;AVGPOST=0.9963;RSQ=0.7916;ERATE=0.0009;THETA=0.0036;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79030090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0224;AVGPOST=0.9958;RSQ=0.9329;ERATE=0.0005;THETA=0.0076;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79030214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4944;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79030259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6875;ERATE=0.0005;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79030364 . T TC 47 PASS INDEL;BAVGPOST=0.996;BRSQ=0.497;LDAF=0.0083;AVGPOST=0.9883;RSQ=0.4446;ERATE=0.0018;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79030371 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.811;LDAF=0.0050;AVGPOST=0.9984;RSQ=0.8663;ERATE=0.0005;THETA=0.0039;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79030372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0154;AVGPOST=0.9982;RSQ=0.9457;ERATE=0.0011;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79030375 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.505;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3959;ERATE=0.0006;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79030379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79030402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9627;ERATE=0.0004;THETA=0.0036;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79030461 . CTT C 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8405;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79030521 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0272;AVGPOST=0.9979;RSQ=0.9679;ERATE=0.0005;THETA=0.0020;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 79030666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.3557;ERATE=0.0005;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79030927 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0053;AVGPOST=0.9975;RSQ=0.8170;ERATE=0.0009;THETA=0.0040;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79031041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0251;AVGPOST=0.9982;RSQ=0.9709;ERATE=0.0006;THETA=0.0098;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 79031122 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79031492 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79031522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79031525 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79031590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8498;ERATE=0.0005;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79031664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6834;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79031728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79031892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0044;AVGPOST=0.9975;RSQ=0.7849;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79031923 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5635;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79031999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5909;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79032076 . A ATAAG 414 PASS INDEL;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6663;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79032141 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1280;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 79032153 rs111321638 TG T 384 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8347;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79032157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79032245 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79032368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79032393 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0049;AVGPOST=0.9989;RSQ=0.9111;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79032472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9071;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79032484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9263;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79032490 . AG A 16113 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1281;AVGPOST=0.9994;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 79032603 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3901;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79032665 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8022;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79032803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0253;AVGPOST=0.9995;RSQ=0.9920;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 79032827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1326;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0004;THETA=0.0010;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 79033084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79033180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1492;AVGPOST=0.9985;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 79033230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1481;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 79033298 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1483;AVGPOST=0.9988;RSQ=0.9967;ERATE=0.0003;THETA=0.0009;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 79033358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6164;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79033395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0038;AVGPOST=0.9984;RSQ=0.8152;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79033438 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4365;AVGPOST=0.9970;RSQ=0.9951;ERATE=0.0006;THETA=0.0003;AC=953;AN=2184 GT:DS:GL:BD 0.43635532 0
1 79033442 rs58779826 C CTTTA 16007 PASS INDEL;BAVGPOST=0.983;BRSQ=0.933;LDAF=0.1434;AVGPOST=0.9911;RSQ=0.9739;ERATE=0.0005;THETA=0.0027;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 79033443 . T TTTA 9137 PASS INDEL;BAVGPOST=0.986;BRSQ=0.939;LDAF=0.1375;AVGPOST=0.9890;RSQ=0.9663;ERATE=0.0009;THETA=0.0005;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 79033448 . T TA 1547 PASS INDEL;BAVGPOST=0.980;BRSQ=0.917;LDAF=0.1366;AVGPOST=0.9882;RSQ=0.9643;ERATE=0.0006;THETA=0.0014;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 79033450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1374;AVGPOST=0.9970;RSQ=0.9915;ERATE=0.0004;THETA=0.0004;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 79033536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79033732 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79033794 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6594;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79033802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79033878 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1434;AVGPOST=0.9969;RSQ=0.9903;ERATE=0.0007;THETA=0.0004;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 79033904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0163;AVGPOST=0.9994;RSQ=0.9839;ERATE=0.0003;THETA=0.0030;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79033908 . T TA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0059;AVGPOST=0.9957;RSQ=0.7118;ERATE=0.0005;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79033947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1411;AVGPOST=0.9978;RSQ=0.9939;ERATE=0.0005;THETA=0.0005;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 79033948 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1402;AVGPOST=0.9979;RSQ=0.9941;ERATE=0.0003;THETA=0.0019;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 79033970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1399;AVGPOST=0.9975;RSQ=0.9931;ERATE=0.0005;THETA=0.0007;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 79034003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1398;AVGPOST=0.9977;RSQ=0.9935;ERATE=0.0004;THETA=0.0025;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 79034010 . TG T 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.9061;ERATE=0.0003;THETA=0.0042;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79034123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79034124 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1235;AVGPOST=0.9979;RSQ=0.9938;ERATE=0.0004;THETA=0.0024;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 79034128 . A AC 177 PASS INDEL;BAVGPOST=0.993;BRSQ=0.714;LDAF=0.0127;AVGPOST=0.9906;RSQ=0.7139;ERATE=0.0009;THETA=0.0036;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79034128 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9992;RSQ=0.9337;ERATE=0.0003;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79034200 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1383;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 79034244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1190;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0003;THETA=0.0017;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 79034266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.1080;AVGPOST=0.9955;RSQ=0.9841;ERATE=0.0007;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 79034376 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79034388 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2308;AVGPOST=0.9959;RSQ=0.9913;ERATE=0.0005;THETA=0.0011;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 79034456 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9683;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79034474 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79034485 . A AC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6918;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79034504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1189;AVGPOST=0.9988;RSQ=0.9950;ERATE=0.0004;THETA=0.0002;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 79034573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9745;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79034676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8495;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=1857;AN=2184 GT:DS:GL:BD 0.85027474 1
1 79034710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0177;AVGPOST=0.9976;RSQ=0.9529;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79034831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8644;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79034951 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0072;AVGPOST=0.9991;RSQ=0.9406;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79034956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0003;THETA=0.0053;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 79034958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1217;AVGPOST=0.9987;RSQ=0.9951;ERATE=0.0005;THETA=0.0004;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 79035009 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9228;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79035045 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8509;AVGPOST=0.9980;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=1859;AN=2184 GT:DS:GL:BD 0.85119045 1
1 79035070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1216;AVGPOST=0.9993;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 79035120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1296;AVGPOST=0.9979;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 79035124 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7209;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79035136 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1342;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 79035161 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6490;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79035170 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.8074;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79035174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7026;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79035178 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8079;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79035191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79035192 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4821;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79035208 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9236;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79035247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6512;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79035273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1338;AVGPOST=0.9982;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=292;AN=2184 GT:DS:GL:BD 0.13369964 0
1 79035310 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8703;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79035335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79035413 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9147;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79035454 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79035503 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1298;AVGPOST=0.9987;RSQ=0.9963;ERATE=0.0003;THETA=0.0007;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 79035522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1493;AVGPOST=0.9973;RSQ=0.9916;ERATE=0.0004;THETA=0.0002;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 79035549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1301;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 79035593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1408;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 79035807 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5438;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79035889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7214;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79035910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79035935 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1301;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 79036009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.685;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7343;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79036135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6720;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79036141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7386;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79036193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1351;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 79036224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79036227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1348;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 79036242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0045;AVGPOST=0.9988;RSQ=0.8796;ERATE=0.0009;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79036248 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.823;LDAF=0.0084;AVGPOST=0.9962;RSQ=0.8201;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79036342 . AG A 166 PASS INDEL;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5372;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79036357 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79036506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.7753;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79036573 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1340;AVGPOST=0.9985;RSQ=0.9944;ERATE=0.0004;THETA=0.0002;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 79036622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1394;AVGPOST=0.9974;RSQ=0.9914;ERATE=0.0004;THETA=0.0005;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 79036628 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.8895;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79036648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0045;AVGPOST=0.9968;RSQ=0.7379;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79036663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1344;AVGPOST=0.9986;RSQ=0.9947;ERATE=0.0006;THETA=0.0004;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 79036719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79036772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5492;ERATE=0.0005;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79036809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9821;ERATE=0.0003;THETA=0.0019;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79036849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79036949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0021;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79036973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9880;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79037031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9880;ERATE=0.0003;THETA=0.0027;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79037033 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.891;LDAF=0.0338;AVGPOST=0.9898;RSQ=0.8812;ERATE=0.0003;THETA=0.0023;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 79037120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0079;AVGPOST=0.9986;RSQ=0.9338;ERATE=0.0003;THETA=0.0021;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79037125 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.673;LDAF=0.0040;AVGPOST=0.9972;RSQ=0.7059;ERATE=0.0006;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79037141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.755;LDAF=0.0109;AVGPOST=0.9950;RSQ=0.8027;ERATE=0.0007;THETA=0.0015;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79037143 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.908;BRSQ=0.659;LDAF=0.1761;AVGPOST=0.8682;RSQ=0.6244;ERATE=0.0309;THETA=0.0032;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 79037182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.637;LDAF=0.0408;AVGPOST=0.9738;RSQ=0.7599;ERATE=0.0010;THETA=0.0027;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 79037198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.590;LDAF=0.1156;AVGPOST=0.8905;RSQ=0.5479;ERATE=0.0176;THETA=0.0070;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 79037225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.876;LDAF=0.0059;AVGPOST=0.9974;RSQ=0.8040;ERATE=0.0007;THETA=0.0034;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79037251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.819;LDAF=0.2904;AVGPOST=0.8982;RSQ=0.8203;ERATE=0.0107;THETA=0.0014;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 79037253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.880;BRSQ=0.771;LDAF=0.3090;AVGPOST=0.8681;RSQ=0.7887;ERATE=0.0078;THETA=0.0012;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 79037295 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.882;BRSQ=0.834;LDAF=0.4072;AVGPOST=0.8750;RSQ=0.8339;ERATE=0.0132;THETA=0.0051;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 79037300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.854;LDAF=0.3660;AVGPOST=0.9082;RSQ=0.8575;ERATE=0.0069;THETA=0.0010;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 79037337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.858;LDAF=0.3718;AVGPOST=0.9145;RSQ=0.8764;ERATE=0.0016;THETA=0.0009;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 79037339 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.900;LDAF=0.0220;AVGPOST=0.9950;RSQ=0.9154;ERATE=0.0003;THETA=0.0038;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79037351 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6505;ERATE=0.0005;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79037354 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.695;LDAF=0.0148;AVGPOST=0.9868;RSQ=0.6464;ERATE=0.0025;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79037358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.533;LDAF=0.0351;AVGPOST=0.9624;RSQ=0.5611;ERATE=0.0063;THETA=0.0036;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79037363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.545;LDAF=0.0219;AVGPOST=0.9753;RSQ=0.5387;ERATE=0.0061;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79037373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8866;ERATE=0.0003;THETA=0.0050;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79037377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5631;ERATE=0.0004;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79037379 . C CGTT 90 PASS INDEL;BAVGPOST=0.996;BRSQ=0.467;LDAF=0.0412;AVGPOST=0.9377;RSQ=0.3432;ERATE=0.0017;THETA=0.0026;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79037418 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.611;LDAF=0.0146;AVGPOST=0.9849;RSQ=0.5838;ERATE=0.0043;THETA=0.0027;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79037442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0216;AVGPOST=0.9976;RSQ=0.9546;ERATE=0.0003;THETA=0.0010;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79037448 . TG T 846 PASS INDEL;BAVGPOST=0.969;BRSQ=0.785;LDAF=0.0586;AVGPOST=0.9809;RSQ=0.8996;ERATE=0.0005;THETA=0.0015;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 79037493 rs58971988 GT G 10558 PASS INDEL;BAVGPOST=0.994;BRSQ=0.970;LDAF=0.0726;AVGPOST=0.9931;RSQ=0.9723;ERATE=0.0004;THETA=0.0055;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 79037495 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0169;AVGPOST=0.9989;RSQ=0.9760;ERATE=0.0003;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79037523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79037547 . A AG 294 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0004;THETA=0.0073;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79037564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8937;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79037576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9839;ERATE=0.0004;THETA=0.0054;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79037588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5205;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79037599 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0093;AVGPOST=0.9984;RSQ=0.9447;ERATE=0.0003;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79037659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0051;AVGPOST=0.9996;RSQ=0.9654;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79037663 rs5772614 C CG 32647 PASS INDEL;BAVGPOST=0.993;BRSQ=0.994;LDAF=0.4572;AVGPOST=0.9779;RSQ=0.9716;ERATE=0.0007;THETA=0.0024;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 79037671 . G GT 9556 PASS INDEL;BAVGPOST=0.948;BRSQ=0.918;LDAF=0.4248;AVGPOST=0.9263;RSQ=0.9004;ERATE=0.0107;THETA=0.0012;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 79037674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.562;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7489;ERATE=0.0003;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79037685 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4680;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79037699 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9479;ERATE=0.0003;THETA=0.0044;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79037734 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8647;ERATE=0.0003;THETA=0.0016;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79037838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.4604;AVGPOST=0.9907;RSQ=0.9877;ERATE=0.0006;THETA=0.0037;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 79037843 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79037873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0058;AVGPOST=0.9988;RSQ=0.9105;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79037876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79037882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8544;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79038000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.909;LDAF=0.0513;AVGPOST=0.9882;RSQ=0.9032;ERATE=0.0006;THETA=0.0016;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 79038036 . AAGT A 308 PASS INDEL;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0040;AVGPOST=0.9961;RSQ=0.6304;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79038144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2933;AVGPOST=0.9926;RSQ=0.9886;ERATE=0.0007;THETA=0.0022;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 79038165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.4322;AVGPOST=0.9823;RSQ=0.9765;ERATE=0.0018;THETA=0.0038;AC=947;AN=2184 GT:DS:GL:BD 0.43360806 0
1 79038328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6540;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79038329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0079;AVGPOST=0.9964;RSQ=0.8133;ERATE=0.0005;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79038360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4562;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79038374 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8714;ERATE=0.0004;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79038423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.979;LDAF=0.4550;AVGPOST=0.9736;RSQ=0.9664;ERATE=0.0013;THETA=0.0102;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 79038463 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.762;LDAF=0.0051;AVGPOST=0.9950;RSQ=0.5894;ERATE=0.0007;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79038523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8261;ERATE=0.0004;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79038530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.917;LDAF=0.3090;AVGPOST=0.9533;RSQ=0.9354;ERATE=0.0007;THETA=0.0031;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 79038590 . GGGT G 1570 PASS INDEL;BAVGPOST=0.944;BRSQ=0.643;LDAF=0.0874;AVGPOST=0.9239;RSQ=0.6385;ERATE=0.0054;THETA=0.0007;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 79038598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.903;LDAF=0.2868;AVGPOST=0.9401;RSQ=0.9128;ERATE=0.0072;THETA=0.0015;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 79038599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.904;LDAF=0.2818;AVGPOST=0.9388;RSQ=0.9111;ERATE=0.0094;THETA=0.0009;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 79038604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.907;LDAF=0.2534;AVGPOST=0.9535;RSQ=0.9322;ERATE=0.0006;THETA=0.0070;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 79038609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.949;BRSQ=0.901;LDAF=0.2442;AVGPOST=0.9540;RSQ=0.9312;ERATE=0.0004;THETA=0.0011;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 79038614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.895;LDAF=0.2444;AVGPOST=0.9511;RSQ=0.9268;ERATE=0.0005;THETA=0.0010;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 79038619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.913;BRSQ=0.656;LDAF=0.1536;AVGPOST=0.8831;RSQ=0.6525;ERATE=0.0260;THETA=0.0137;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 79038634 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.751;LDAF=0.0248;AVGPOST=0.9800;RSQ=0.6672;ERATE=0.0030;THETA=0.0012;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 79038643 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.605;LDAF=0.0315;AVGPOST=0.9611;RSQ=0.4842;ERATE=0.0068;THETA=0.0098;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79038648 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.871;BRSQ=0.705;LDAF=0.2128;AVGPOST=0.8665;RSQ=0.7241;ERATE=0.0231;THETA=0.0080;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 79038653 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.644;LDAF=0.0516;AVGPOST=0.9541;RSQ=0.6136;ERATE=0.0156;THETA=0.0074;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 79038658 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.875;LDAF=0.3199;AVGPOST=0.9016;RSQ=0.8527;ERATE=0.0257;THETA=0.0007;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 79038663 . C CAGTAG 5438 PASS INDEL;BAVGPOST=0.900;BRSQ=0.853;LDAF=0.3864;AVGPOST=0.9054;RSQ=0.8846;ERATE=0.0036;THETA=0.0067;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 79038663 . GAGT G 26336 PASS INDEL;BAVGPOST=0.965;BRSQ=0.947;LDAF=0.3979;AVGPOST=0.9620;RSQ=0.9556;ERATE=0.0004;THETA=0.0015;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 79038683 rs112512442 T TAG 35039 PASS INDEL;BAVGPOST=0.961;BRSQ=0.942;LDAF=0.4022;AVGPOST=0.9597;RSQ=0.9523;ERATE=0.0027;THETA=0.0054;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 79038686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6054;ERATE=0.0003;THETA=0.0110;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79038710 . GA G 57 PASS INDEL;BAVGPOST=0.997;BRSQ=0.581;LDAF=0.0064;AVGPOST=0.9925;RSQ=0.5024;ERATE=0.0008;THETA=0.0030;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79038750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.766;LDAF=0.0071;AVGPOST=0.9958;RSQ=0.7622;ERATE=0.0005;THETA=0.0033;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79038785 . G GAATAA 2418 PASS INDEL;BAVGPOST=0.979;BRSQ=0.756;LDAF=0.0552;AVGPOST=0.9583;RSQ=0.6620;ERATE=0.0141;THETA=0.0114;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 79038785 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7368;ERATE=0.0004;THETA=0.0087;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79038788 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6130;ERATE=0.0005;THETA=0.0128;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79038797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3343;AVGPOST=0.9965;RSQ=0.9950;ERATE=0.0005;THETA=0.0006;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 79038822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4505;AVGPOST=0.9958;RSQ=0.9948;ERATE=0.0005;THETA=0.0009;AC=981;AN=2184 GT:DS:GL:BD 0.44917583 0
1 79038853 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7074;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79038863 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0138;AVGPOST=0.9988;RSQ=0.9654;ERATE=0.0003;THETA=0.0020;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79038891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1459;AVGPOST=0.9978;RSQ=0.9943;ERATE=0.0003;THETA=0.0012;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 79038902 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0755;AVGPOST=0.9989;RSQ=0.9955;ERATE=0.0003;THETA=0.0008;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 79038931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0573;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0040;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 79038954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4635;AVGPOST=0.9977;RSQ=0.9968;ERATE=0.0005;THETA=0.0019;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 79039010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7019;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79039024 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79039033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.662;LDAF=0.0354;AVGPOST=0.9643;RSQ=0.5940;ERATE=0.0137;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79039041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1519;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0007;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 79039160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9014;ERATE=0.0004;THETA=0.0017;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79039193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2331;AVGPOST=0.9975;RSQ=0.9955;ERATE=0.0006;THETA=0.0014;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 79039210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1520;AVGPOST=0.9987;RSQ=0.9965;ERATE=0.0004;THETA=0.0020;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 79039222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0458;AVGPOST=0.9987;RSQ=0.9877;ERATE=0.0003;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 79039276 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8499;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79039277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0475;AVGPOST=0.9947;RSQ=0.9556;ERATE=0.0005;THETA=0.0007;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 79039283 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.941;LDAF=0.0459;AVGPOST=0.9977;RSQ=0.9788;ERATE=0.0005;THETA=0.0013;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 79039291 . G GC 15526 PASS INDEL;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.3972;AVGPOST=0.9907;RSQ=0.9870;ERATE=0.0005;THETA=0.0005;AC=868;AN=2184 GT:DS:GL:BD 0.39743590 0
1 79039388 rs5772615 C CA 44432 PASS INDEL;BAVGPOST=0.989;BRSQ=0.982;LDAF=0.3981;AVGPOST=0.9878;RSQ=0.9838;ERATE=0.0007;THETA=0.0009;AC=869;AN=2184 GT:DS:GL:BD 0.39789379 0
1 79039390 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79039526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0519;AVGPOST=0.9984;RSQ=0.9871;ERATE=0.0003;THETA=0.0010;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 79039628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79039635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79039661 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0134;AVGPOST=0.9993;RSQ=0.9757;ERATE=0.0003;THETA=0.0015;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79039666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79039671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8385;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79039696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4449;AVGPOST=0.9979;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=970;AN=2184 GT:DS:GL:BD 0.44413918 0
1 79039761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0970;AVGPOST=0.9989;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 79039835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9142;ERATE=0.0004;THETA=0.0018;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79039841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79039896 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79039906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0086;AVGPOST=0.9990;RSQ=0.9491;ERATE=0.0003;THETA=0.0023;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79039947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0084;AVGPOST=0.9979;RSQ=0.9004;ERATE=0.0005;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79039990 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79040019 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79040057 . C CT 859 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9624;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79040160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79040196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1361;AVGPOST=0.9981;RSQ=0.9944;ERATE=0.0005;THETA=0.0015;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 79040240 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79040344 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9552;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79040381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79040397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0059;AVGPOST=0.9997;RSQ=0.9782;ERATE=0.0003;THETA=0.0027;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79040509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0058;AVGPOST=0.9993;RSQ=0.9506;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79040534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5045;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79040603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8211;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79040683 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6402;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79040746 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79040819 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9581;ERATE=0.0004;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79040851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5640;ERATE=0.0004;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79040881 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9556;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79040937 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9533;ERATE=0.0004;THETA=0.0038;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79040968 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9573;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79040979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9331;ERATE=0.0005;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79041017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9121;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79041029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0120;AVGPOST=0.9980;RSQ=0.9227;ERATE=0.0006;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79041080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.778;LDAF=0.0051;AVGPOST=0.9973;RSQ=0.7779;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79041087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2352;AVGPOST=0.9957;RSQ=0.9923;ERATE=0.0003;THETA=0.0009;AC=515;AN=2184 GT:DS:GL:BD 0.23580585 0
1 79041092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9739;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79041176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9998;RSQ=0.9856;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79041200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79041204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6315;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79041208 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79041237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0145;AVGPOST=0.9968;RSQ=0.9249;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79041259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7805;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79041411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0006;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79041421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9996;RSQ=0.9679;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79041504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4893;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79041589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9992;RSQ=0.9475;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79041653 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8608;ERATE=0.0003;THETA=0.0035;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79041794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4106;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0008;THETA=0.0036;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 79041795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5560;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79041851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4428;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79041852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8922;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79041941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79042091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1084;AVGPOST=0.9976;RSQ=0.9905;ERATE=0.0005;THETA=0.0007;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 79042234 . GAGC G 66 PASS INDEL;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6491;ERATE=0.0014;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79042377 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7031;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79042417 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.917;LDAF=0.0174;AVGPOST=0.9972;RSQ=0.9389;ERATE=0.0004;THETA=0.0017;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79042596 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1174;AVGPOST=0.9975;RSQ=0.9908;ERATE=0.0003;THETA=0.0011;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 79042855 . AG A 2753 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0195;AVGPOST=0.9978;RSQ=0.9576;ERATE=0.0003;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 79042883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0031;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79042884 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0104;AVGPOST=0.9992;RSQ=0.9653;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79042998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7653;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79043069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8552;ERATE=0.0005;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79043141 rs60346918 AG A 8131 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0436;AVGPOST=0.9989;RSQ=0.9911;ERATE=0.0004;THETA=0.0066;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 79043378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6474;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79043481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79043496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8613;ERATE=0.0007;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79043527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79043548 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7667;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79043557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8525;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79043651 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.4105;AVGPOST=0.9941;RSQ=0.9916;ERATE=0.0004;THETA=0.0007;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 79043716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79043732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0077;AVGPOST=0.9978;RSQ=0.8951;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79043787 . TG T 60 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5703;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79043808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79043821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0410;AVGPOST=0.9992;RSQ=0.9921;ERATE=0.0003;THETA=0.0029;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 79043827 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0053;AVGPOST=0.9986;RSQ=0.8968;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79043829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5467;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79043960 . CT C 408 PASS INDEL;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0117;AVGPOST=0.9964;RSQ=0.8777;ERATE=0.0007;THETA=0.0026;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79044027 . G GTCC 601 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0068;AVGPOST=0.9978;RSQ=0.8714;ERATE=0.0004;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79044122 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0078;AVGPOST=0.9967;RSQ=0.8385;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79044144 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3910;AVGPOST=0.9878;RSQ=0.9804;ERATE=0.0029;THETA=0.0007;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 79044164 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79044275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5852;ERATE=0.0007;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79044456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0385;AVGPOST=0.9981;RSQ=0.9852;ERATE=0.0004;THETA=0.0016;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 79044502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79044635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0021;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79044641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0203;AVGPOST=0.9973;RSQ=0.9592;ERATE=0.0003;THETA=0.0013;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79044763 . C CAA 701 PASS INDEL;BAVGPOST=0.971;BRSQ=0.748;LDAF=0.0923;AVGPOST=0.9261;RSQ=0.6343;ERATE=0.0051;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 79044828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5928;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79045048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7162;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79045066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79045179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79045220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9981;RSQ=0.4900;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79045252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.916;LDAF=0.0150;AVGPOST=0.9937;RSQ=0.8586;ERATE=0.0004;THETA=0.0016;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79045301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.829;LDAF=0.0095;AVGPOST=0.9953;RSQ=0.7902;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79045303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79045397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5069;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79045443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0056;AVGPOST=0.9962;RSQ=0.7218;ERATE=0.0005;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79045490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.928;LDAF=0.0470;AVGPOST=0.9890;RSQ=0.9068;ERATE=0.0006;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 79045584 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0422;AVGPOST=0.9979;RSQ=0.9825;ERATE=0.0004;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 79045587 . AG A 89 PASS INDEL;BAVGPOST=0.998;BRSQ=0.698;LDAF=0.0022;AVGPOST=0.9967;RSQ=0.3626;ERATE=0.0009;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79045596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4660;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79045733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0099;AVGPOST=0.9965;RSQ=0.8536;ERATE=0.0005;THETA=0.0029;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79045814 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0125;AVGPOST=0.9980;RSQ=0.9461;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79045854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0145;AVGPOST=0.9982;RSQ=0.9488;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79046128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8442;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79046162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0100;AVGPOST=0.9984;RSQ=0.9350;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79046255 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9253;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79046314 . TCTC T 104 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0042;AVGPOST=0.9955;RSQ=0.5941;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79046329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4843;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79046519 . T TA 1427 PASS INDEL;BAVGPOST=0.995;BRSQ=0.741;LDAF=0.0110;AVGPOST=0.9930;RSQ=0.7392;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79046537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9046;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79046629 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.4163;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79046669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79046672 . G GA 9 PASS INDEL;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0050;AVGPOST=0.9918;RSQ=0.3711;ERATE=0.0013;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79046762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4649;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79046953 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7998;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79046965 . TCTCA T 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79046965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.857;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9540;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79046972 . TG T 2833 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0205;AVGPOST=0.9982;RSQ=0.9668;ERATE=0.0005;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79046990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0569;AVGPOST=0.9985;RSQ=0.9885;ERATE=0.0004;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 79047010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79047072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0212;AVGPOST=0.9987;RSQ=0.9713;ERATE=0.0005;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 79047108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0861;AVGPOST=0.9987;RSQ=0.9932;ERATE=0.0004;THETA=0.0006;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 79047109 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0276;AVGPOST=0.9989;RSQ=0.9830;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79047135 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9581;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=2092;AN=2184 GT:DS:GL:BD 0.95787543 1
1 79047308 . TCA T 1474 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0460;AVGPOST=0.9932;RSQ=0.9407;ERATE=0.0006;THETA=0.0001;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 79047331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.9943;AVGPOST=0.9981;RSQ=0.8567;ERATE=0.0006;THETA=0.0002;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 79047336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0795;AVGPOST=0.9981;RSQ=0.9912;ERATE=0.0007;THETA=0.0007;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 79047350 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0004;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79047372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0400;AVGPOST=0.9994;RSQ=0.9924;ERATE=0.0003;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 79047444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4103;AVGPOST=0.9972;RSQ=0.9959;ERATE=0.0007;THETA=0.0005;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 79047481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79047486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8098;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79047562 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0773;AVGPOST=0.9990;RSQ=0.9940;ERATE=0.0005;THETA=0.0009;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 79047563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6706;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79047589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0029;AVGPOST=0.9980;RSQ=0.7329;ERATE=0.0010;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79047599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6268;ERATE=0.0008;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79047614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.5924;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79047619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.9689;AVGPOST=0.9994;RSQ=0.9915;ERATE=0.0004;THETA=0.0004;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 79047699 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9869;ERATE=0.0004;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79047703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0567;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0004;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 79047737 . AAAAC A 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.5110;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79047796 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79047809 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6670;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79047844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5198;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79047854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5914;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79048049 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0108;AVGPOST=0.9987;RSQ=0.9601;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79048056 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5335;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79048238 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79048296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79048305 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0080;AVGPOST=0.9971;RSQ=0.8735;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79048332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2251;AVGPOST=0.9974;RSQ=0.9943;ERATE=0.0007;THETA=0.0004;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 79048345 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79048408 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 79048465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8714;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=1904;AN=2184 GT:DS:GL:BD 0.87179488 1
1 79048598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79048616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9012;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=1968;AN=2184 GT:DS:GL:BD 0.90109891 1
1 79048621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79048633 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79048634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79048635 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6722;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=1468;AN=2184 GT:DS:GL:BD 0.67216116 1
1 79048671 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79048805 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9250;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=2020;AN=2184 GT:DS:GL:BD 0.92490840 1
1 79048991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 79049004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049051 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9689;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=2116;AN=2184 GT:DS:GL:BD 0.96886444 1
1 79049156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79049157 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0124;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0004;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79049252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6626;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0329;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 79049409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8765;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79049415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79049519 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6093;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79049527 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0172;AVGPOST=0.9994;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79049530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049698 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79049802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0220;AVGPOST=0.9999;RSQ=0.9979;ERATE=0.0003;THETA=0.0010;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79049839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049900 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0237;AVGPOST=0.9999;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 79049930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79049941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79049954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79049973 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9358;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=2044;AN=2184 GT:DS:GL:BD 0.93589741 1
1 79050135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.9293;AVGPOST=0.9974;RSQ=0.9867;ERATE=0.0005;THETA=0.0007;AC=2030;AN=2184 GT:DS:GL:BD 0.92948717 1
1 79050171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7903;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79050195 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9288;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0005;THETA=0.0003;AC=2029;AN=2184 GT:DS:GL:BD 0.92902929 1
1 79050240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0120;AVGPOST=0.9993;RSQ=0.9737;ERATE=0.0005;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79050254 . AG A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79050262 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0109;AVGPOST=0.9997;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79050301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.9633;AVGPOST=0.9975;RSQ=0.9746;ERATE=0.0007;THETA=0.0009;AC=2105;AN=2184 GT:DS:GL:BD 0.96382785 1
1 79050336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6375;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79050358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.785;LDAF=0.0066;AVGPOST=0.9957;RSQ=0.7499;ERATE=0.0006;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79050363 . G GGC 55101 PASS INDEL;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.9282;AVGPOST=0.9924;RSQ=0.9661;ERATE=0.0011;THETA=0.0008;AC=2028;AN=2184 GT:DS:GL:BD 0.92857140 1
1 79050374 rs10693700 C CGT 118758 PASS INDEL;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.9282;AVGPOST=0.9972;RSQ=0.9850;ERATE=0.0007;THETA=0.0004;AC=2029;AN=2184 GT:DS:GL:BD 0.92902929 1
1 79050376 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9979;RSQ=0.9368;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79050424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0102;AVGPOST=0.9989;RSQ=0.9568;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79050428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3549;AVGPOST=0.9967;RSQ=0.9939;ERATE=0.0004;THETA=0.0002;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 79050495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4349;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 79050510 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79050571 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4721;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79050615 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79050617 . ATTG A 385 PASS INDEL;BAVGPOST=0.998;BRSQ=0.714;LDAF=0.0050;AVGPOST=0.9956;RSQ=0.6415;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79050670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79050685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.908;LDAF=0.0281;AVGPOST=0.9916;RSQ=0.8740;ERATE=0.0025;THETA=0.0028;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79051056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6011;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79051240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.978;LDAF=0.1649;AVGPOST=0.9962;RSQ=0.9890;ERATE=0.0005;THETA=0.0004;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 79051387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79051389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7586;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0004;THETA=0.0019;AC=1655;AN=2184 GT:DS:GL:BD 0.75778389 1
1 79051420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.7663;AVGPOST=0.9964;RSQ=0.9925;ERATE=0.0004;THETA=0.0006;AC=1672;AN=2184 GT:DS:GL:BD 0.76556778 1
1 79051462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0005;THETA=0.0061;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79051520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7721;ERATE=0.0007;THETA=0.0066;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79051606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4676;ERATE=0.0004;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79051641 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7934;ERATE=0.0006;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79051692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0108;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79051711 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79051738 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9064;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79051748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.9709;AVGPOST=0.9993;RSQ=0.9919;ERATE=0.0003;THETA=0.0029;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 79051818 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5951;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79051946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79051999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0031;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79052059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79052196 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79052218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79052272 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79052280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7372;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0004;THETA=0.0002;AC=1611;AN=2184 GT:DS:GL:BD 0.73763734 1
1 79052480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79052527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9129;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79052597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0201;AVGPOST=0.9988;RSQ=0.9755;ERATE=0.0004;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 79052610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9412;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79052616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0094;AVGPOST=0.9986;RSQ=0.9449;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79052617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79052732 . AG A 212 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79052778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2851;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0004;THETA=0.0006;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 79052785 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5371;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79052854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1546;AVGPOST=0.9973;RSQ=0.9921;ERATE=0.0007;THETA=0.0003;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 79052895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7599;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79052977 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7294;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=1594;AN=2184 GT:DS:GL:BD 0.72985345 1
1 79053038 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79053098 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1532;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 79053140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79053148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79053149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7743;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79053194 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5722;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79053218 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79053237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6391;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79053248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0022;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79053283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0077;AVGPOST=0.9984;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79053324 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7266;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0006;THETA=0.0003;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 79053406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1510;AVGPOST=0.9974;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 79053407 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8640;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79053420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9464;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79053480 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.3452;AVGPOST=0.9913;RSQ=0.9847;ERATE=0.0008;THETA=0.0006;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 79053490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0081;AVGPOST=0.9993;RSQ=0.9647;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79053493 . C CA 560 PASS INDEL;BAVGPOST=0.897;BRSQ=0.454;LDAF=0.0984;AVGPOST=0.9011;RSQ=0.5829;ERATE=0.0104;THETA=0.0012;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 79053533 . G GC 129 PASS INDEL;BAVGPOST=0.986;BRSQ=0.627;LDAF=0.0203;AVGPOST=0.9826;RSQ=0.6616;ERATE=0.0009;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79053537 . ATG A 92 PASS INDEL;BAVGPOST=0.983;BRSQ=0.595;LDAF=0.0230;AVGPOST=0.9798;RSQ=0.6545;ERATE=0.0018;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79053538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79053583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1604;AVGPOST=0.9973;RSQ=0.9916;ERATE=0.0007;THETA=0.0004;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 79053684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6429;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79053715 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0134;AVGPOST=0.9987;RSQ=0.9749;ERATE=0.0003;THETA=0.0030;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79053886 . C CCTCA 4567 PASS INDEL;BAVGPOST=0.996;BRSQ=0.875;LDAF=0.0156;AVGPOST=0.9955;RSQ=0.8916;ERATE=0.0005;THETA=0.0019;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79053903 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7051;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79054029 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.760;LDAF=0.0106;AVGPOST=0.9938;RSQ=0.7692;ERATE=0.0004;THETA=0.0043;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79054041 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1406;AVGPOST=0.9976;RSQ=0.9911;ERATE=0.0007;THETA=0.0012;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 79054051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1519;AVGPOST=0.9915;RSQ=0.9745;ERATE=0.0022;THETA=0.0005;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 79054101 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0004;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79054146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79054216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3773;AVGPOST=0.9941;RSQ=0.9898;ERATE=0.0009;THETA=0.0003;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 79054340 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.940;LDAF=0.0147;AVGPOST=0.9972;RSQ=0.9382;ERATE=0.0005;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79054437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9992;RSQ=0.9763;ERATE=0.0004;THETA=0.0035;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79054502 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9984;RSQ=0.9574;ERATE=0.0005;THETA=0.0035;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79054522 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.568;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6162;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79054526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2804;AVGPOST=0.9946;RSQ=0.9892;ERATE=0.0005;THETA=0.0004;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 79054531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0081;AVGPOST=0.9994;RSQ=0.9621;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79054577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79054628 rs113183871 TGAG T 679 PASS INDEL;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0062;AVGPOST=0.9987;RSQ=0.9081;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79054665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0009;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79054694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79054721 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9929;ERATE=0.0003;THETA=0.0051;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79054790 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79054842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1458;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 79054870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4513;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79054898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9678;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79055029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79055132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1514;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 79055147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79055180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79055181 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1387;AVGPOST=0.9990;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 79055198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79055217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9825;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79055280 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79055282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79055312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.8040;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79055437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79055443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79055452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79055516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79055553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79055580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79055587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79055672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9219;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79055739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79055775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79055792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79055794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0256;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79055859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9783;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79055920 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79055938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79056006 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.9012;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79056009 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79056134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9993;RSQ=0.9757;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79056318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1860;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0004;THETA=0.0002;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 79056438 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79056544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0129;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79056545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79056601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9829;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79056712 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7155;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=1564;AN=2184 GT:DS:GL:BD 0.71611720 1
1 79056778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79056942 . T TA 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.6877;ERATE=0.0004;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79057060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79057076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6519;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79057087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.609;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5574;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79057141 rs76955651 GT G 1874 PASS INDEL;BAVGPOST=0.839;BRSQ=0.473;LDAF=0.2213;AVGPOST=0.7984;RSQ=0.5056;ERATE=0.0394;THETA=0.0005;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 79057239 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.943;BRSQ=0.896;LDAF=0.4913;AVGPOST=0.8844;RSQ=0.8268;ERATE=0.0327;THETA=0.0003;AC=1059;AN=2184 GT:DS:GL:BD 0.48489010 0
1 79057247 . T TG 9430 PASS INDEL;BAVGPOST=0.884;BRSQ=0.245;LDAF=0.8482;AVGPOST=0.7939;RSQ=0.3460;ERATE=0.0225;THETA=0.0007;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 79057247 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.2954;AVGPOST=0.9824;RSQ=0.9688;ERATE=0.0004;THETA=0.0006;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 79057257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79057346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79057378 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9889;AVGPOST=0.9989;RSQ=0.9636;ERATE=0.0003;THETA=0.0007;AC=2160;AN=2184 GT:DS:GL:BD 0.98901099 1
1 79057529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79057595 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.999;LDAF=0.7790;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=1701;AN=2184 GT:DS:GL:BD 0.77884614 1
1 79057650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79057800 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9463;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79057834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79057871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7982;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=1744;AN=2184 GT:DS:GL:BD 0.79853481 1
1 79057889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79057924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79057946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7085;ERATE=0.0008;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79058062 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5360;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79058275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79058298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9229;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79058308 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5710;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79058329 . CTATT C 351 PASS INDEL;BAVGPOST=0.997;BRSQ=0.729;LDAF=0.0055;AVGPOST=0.9984;RSQ=0.8655;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79058414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5886;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79058436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5899;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79058528 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79058567 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0102;AVGPOST=0.9979;RSQ=0.9250;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79058576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9356;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79058690 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79058778 . TAC T 107 PASS INDEL;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6266;ERATE=0.0005;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79058804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.9982;AVGPOST=0.9983;RSQ=0.6650;ERATE=0.0004;THETA=0.0005;AC=2181;AN=2184 GT:DS:GL:BD 0.99862635 1
1 79059014 . GACA G 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4867;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79059058 . AAG A 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5142;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79059065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9993;RSQ=0.9725;ERATE=0.0004;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79059096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9527;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79059114 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7890;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79059159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.643;LDAF=0.0064;AVGPOST=0.9935;RSQ=0.5954;ERATE=0.0009;THETA=0.0040;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79059212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.653;LDAF=0.0112;AVGPOST=0.9921;RSQ=0.7376;ERATE=0.0008;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79059254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.857;LDAF=0.7326;AVGPOST=0.8961;RSQ=0.8064;ERATE=0.0130;THETA=0.0016;AC=1663;AN=2184 GT:DS:GL:BD 0.76144689 1
1 79059257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.718;LDAF=0.0059;AVGPOST=0.9914;RSQ=0.4532;ERATE=0.0009;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79059278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0070;AVGPOST=0.9946;RSQ=0.7014;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79059310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.673;LDAF=0.0059;AVGPOST=0.9940;RSQ=0.6038;ERATE=0.0009;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79059353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7945;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79059362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0044;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79059476 rs71800003 GAT G 22606 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2181;AVGPOST=0.9968;RSQ=0.9924;ERATE=0.0007;THETA=0.0005;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 79059500 rs10535634 AT A 477 PASS INDEL;BAVGPOST=0.905;BRSQ=0.736;LDAF=0.2125;AVGPOST=0.8999;RSQ=0.7801;ERATE=0.0056;THETA=0.0003;AC=467;AN=2184 GT:DS:GL:BD 0.21382783 0
1 79059503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2434;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0004;THETA=0.0007;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 79059556 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79059647 . C CA 2860 PASS INDEL;BAVGPOST=0.929;BRSQ=0.867;LDAF=0.4085;AVGPOST=0.9028;RSQ=0.8521;ERATE=0.0144;THETA=0.0003;AC=927;AN=2184 GT:DS:GL:BD 0.42445055 0
1 79059697 rs11456569 C CT 5572 PASS INDEL;BAVGPOST=0.923;BRSQ=0.853;LDAF=0.4071;AVGPOST=0.8937;RSQ=0.8381;ERATE=0.0204;THETA=0.0034;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 79059705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1822;AVGPOST=0.9976;RSQ=0.9934;ERATE=0.0005;THETA=0.0002;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 79059790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9450;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79059803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.7948;AVGPOST=0.9965;RSQ=0.9918;ERATE=0.0005;THETA=0.0001;AC=1736;AN=2184 GT:DS:GL:BD 0.79487181 1
1 79059830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.7947;AVGPOST=0.9963;RSQ=0.9919;ERATE=0.0005;THETA=0.0045;AC=1736;AN=2184 GT:DS:GL:BD 0.79487181 1
1 79059833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2202;AVGPOST=0.9959;RSQ=0.9917;ERATE=0.0005;THETA=0.0005;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 79059897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9852;ERATE=0.0003;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79059898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79059925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79059970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1351;AVGPOST=0.9958;RSQ=0.9875;ERATE=0.0004;THETA=0.0015;AC=294;AN=2184 GT:DS:GL:BD 0.13461539 0
1 79060004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3164;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 79060048 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8467;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79060108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1829;AVGPOST=0.9986;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 79060211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6686;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79060322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79060370 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7343;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79060400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5184;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79060404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0099;AVGPOST=0.9992;RSQ=0.9658;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79060607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4435;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79060617 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5694;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79060625 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.982;LDAF=0.2179;AVGPOST=0.9978;RSQ=0.9942;ERATE=0.0006;THETA=0.0005;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 79060640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1830;AVGPOST=0.9977;RSQ=0.9933;ERATE=0.0005;THETA=0.0006;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 79060651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.814;LDAF=0.0129;AVGPOST=0.9929;RSQ=0.8034;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79060687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.956;LDAF=0.8193;AVGPOST=0.9793;RSQ=0.9531;ERATE=0.0025;THETA=0.0030;AC=1797;AN=2184 GT:DS:GL:BD 0.82280219 1
1 79060734 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6837;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79060754 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5357;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79060769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9702;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79060848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5611;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79060931 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3166;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0005;THETA=0.0007;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 79061025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0151;AVGPOST=0.9989;RSQ=0.9694;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79061049 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3050;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0005;THETA=0.0003;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 79061063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1828;AVGPOST=0.9987;RSQ=0.9960;ERATE=0.0005;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 79061071 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.856;LDAF=0.0168;AVGPOST=0.9962;RSQ=0.9086;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79061095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.444;LDAF=0.0190;AVGPOST=0.9765;RSQ=0.5117;ERATE=0.0053;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79061144 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.862;LDAF=0.0186;AVGPOST=0.9959;RSQ=0.9115;ERATE=0.0004;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 79061170 . TG T 18 PASS INDEL;BAVGPOST=0.998;BRSQ=0.716;LDAF=0.0140;AVGPOST=0.9845;RSQ=0.5757;ERATE=0.0043;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79061176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6079;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79061217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6031;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79061233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79061300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8956;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79061354 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.792;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8371;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79061435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8516;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79061463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3162;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 79061487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79061705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.8422;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79061724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7956;AVGPOST=0.9980;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=1738;AN=2184 GT:DS:GL:BD 0.79578757 1
1 79061737 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8214;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79061836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0640;ERATE=0.0004;THETA=0.0014;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79061866 rs35722141 AC A 18887 PASS INDEL;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1893;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=413;AN=2184 GT:DS:GL:BD 0.18910256 0
1 79062041 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0070;AVGPOST=0.9963;RSQ=0.8224;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79062102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.683;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79062142 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8544;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79062234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79062266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0062;AVGPOST=0.9980;RSQ=0.8638;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79062269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79062452 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9311;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79062512 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9027;AVGPOST=0.9981;RSQ=0.9910;ERATE=0.0004;THETA=0.0030;AC=1972;AN=2184 GT:DS:GL:BD 0.90293038 1
1 79062612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6135;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79062663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79062724 . CAATT C 204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0071;AVGPOST=0.9956;RSQ=0.7585;ERATE=0.0007;THETA=0.0011;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79062766 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8470;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79062814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79062818 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5588;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79062852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79062857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0035;AVGPOST=0.9962;RSQ=0.6410;ERATE=0.0004;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79062884 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9769;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79062910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6694;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79062934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7911;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79063054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5949;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79063061 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0220;AVGPOST=0.9968;RSQ=0.9490;ERATE=0.0004;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79063148 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5288;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79063190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0734;AVGPOST=0.9979;RSQ=0.9873;ERATE=0.0003;THETA=0.0002;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 79063247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7995;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79063429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.7141;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79063438 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8971;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79063716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8276;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79063753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0128;AVGPOST=0.9986;RSQ=0.9637;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79063784 . GCC G 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.5904;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79063932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9048;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79064040 . GC G 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0056;AVGPOST=0.9925;RSQ=0.4582;ERATE=0.0014;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79064085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5906;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79064110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79064287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7976;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79064289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79064379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9018;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79064440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6335;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79064446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0797;AVGPOST=0.9954;RSQ=0.9808;ERATE=0.0004;THETA=0.0004;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 79064579 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.961;LDAF=0.0860;AVGPOST=0.9945;RSQ=0.9753;ERATE=0.0003;THETA=0.0060;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 79064605 . CAG C 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3754;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79064813 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8305;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79064818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79064832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0199;AVGPOST=0.9994;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79064947 . TC T 4218 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0701;AVGPOST=0.9938;RSQ=0.9563;ERATE=0.0010;THETA=0.0003;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 79064968 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0204;AVGPOST=0.9988;RSQ=0.9730;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79065488 . GTT G 510 PASS INDEL;BAVGPOST=0.992;BRSQ=0.827;LDAF=0.0223;AVGPOST=0.9883;RSQ=0.7955;ERATE=0.0020;THETA=0.0032;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79065558 rs112049009 CT C 681 PASS INDEL;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0057;AVGPOST=0.9981;RSQ=0.8483;ERATE=0.0006;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79065595 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0035;AVGPOST=0.9967;RSQ=0.6482;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79065715 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4758;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79065996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79066015 . TCTC T 211 PASS INDEL;BAVGPOST=0.985;BRSQ=0.646;LDAF=0.0377;AVGPOST=0.9568;RSQ=0.5178;ERATE=0.0102;THETA=0.0014;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 79066130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79066301 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79066401 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0349;AVGPOST=0.9994;RSQ=0.9924;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 79066559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0047;AVGPOST=0.9975;RSQ=0.7932;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79066781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.4908;ERATE=0.0006;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79066839 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0073;AVGPOST=0.9983;RSQ=0.8939;ERATE=0.0004;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79066930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0769;AVGPOST=0.9987;RSQ=0.9928;ERATE=0.0004;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 79066939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5536;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0010;AC=1209;AN=2184 GT:DS:GL:BD 0.55357140 1
1 79067169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0767;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 79067214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9527;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79067262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79067287 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79067319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1059;AVGPOST=0.9982;RSQ=0.9922;ERATE=0.0003;THETA=0.0007;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 79067419 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79067443 rs59929479 CA C 2200 PASS INDEL;BAVGPOST=0.982;BRSQ=0.874;LDAF=0.0656;AVGPOST=0.9884;RSQ=0.9281;ERATE=0.0012;THETA=0.0002;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 79067570 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0473;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 79067787 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9104;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79067805 . T TG 88 PASS INDEL;BAVGPOST=0.998;BRSQ=0.916;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6108;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79067888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0112;AVGPOST=0.9993;RSQ=0.9694;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79067977 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79068076 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79068110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0015;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79068173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0112;AVGPOST=0.9978;RSQ=0.9166;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79068182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79068245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.0750;AVGPOST=0.9955;RSQ=0.9772;ERATE=0.0020;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 79068254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9178;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79068263 . G GT 165 PASS INDEL;BAVGPOST=0.990;BRSQ=0.461;LDAF=0.0121;AVGPOST=0.9864;RSQ=0.5340;ERATE=0.0032;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79068280 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.964;LDAF=0.2757;AVGPOST=0.9805;RSQ=0.9669;ERATE=0.0024;THETA=0.0003;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 79068286 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.978;LDAF=0.2321;AVGPOST=0.9917;RSQ=0.9838;ERATE=0.0006;THETA=0.0003;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 79068288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4911;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79068364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6758;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79068416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.963;LDAF=0.5166;AVGPOST=0.9833;RSQ=0.9782;ERATE=0.0006;THETA=0.0023;AC=1130;AN=2184 GT:DS:GL:BD 0.51739925 1
1 79068492 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.475;LDAF=0.0237;AVGPOST=0.9777;RSQ=0.6594;ERATE=0.0016;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 79068524 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0055;AVGPOST=0.9968;RSQ=0.7820;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79068551 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5295;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79068560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2406;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 79068620 . T TTTTAA 173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7212;ERATE=0.0003;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79068797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4411;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79068859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0082;AVGPOST=0.9958;RSQ=0.7968;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79068882 . CT C 204 PASS INDEL;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4701;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79068889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.931;LDAF=0.0508;AVGPOST=0.9917;RSQ=0.9449;ERATE=0.0003;THETA=0.0001;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 79068892 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.648;LDAF=0.0066;AVGPOST=0.9948;RSQ=0.6615;ERATE=0.0011;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79068959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0024;AVGPOST=0.9971;RSQ=0.5857;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79069053 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79069085 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79069210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7880;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79069223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8825;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79069250 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0061;AVGPOST=0.9975;RSQ=0.8425;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79069261 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79069293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6312;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=1379;AN=2184 GT:DS:GL:BD 0.63141024 1
1 79069490 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0759;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 79069606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79069656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2397;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 79069692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0156;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79069749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.777;LDAF=0.0057;AVGPOST=0.9972;RSQ=0.7791;ERATE=0.0010;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79069881 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79070069 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79070075 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79070076 rs72115688 CAG C 1772 PASS INDEL;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0133;AVGPOST=0.9962;RSQ=0.8785;ERATE=0.0004;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79070098 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0760;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 79070165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0119;AVGPOST=0.9963;RSQ=0.8928;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79070173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0034;AVGPOST=0.9949;RSQ=0.4037;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79070299 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0940;AVGPOST=0.9978;RSQ=0.9895;ERATE=0.0004;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 79070530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0761;AVGPOST=0.9990;RSQ=0.9939;ERATE=0.0005;THETA=0.0001;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 79070553 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0761;AVGPOST=0.9990;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 79070601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9977;RSQ=0.9337;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79070667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2392;AVGPOST=0.9984;RSQ=0.9965;ERATE=0.0005;THETA=0.0004;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 79070675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0164;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0012;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79070821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7937;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79070871 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.722;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7369;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79070915 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9990;RSQ=0.9598;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79071022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0050;AVGPOST=0.9959;RSQ=0.6859;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79071060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0102;AVGPOST=0.9983;RSQ=0.9230;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79071069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0317;AVGPOST=0.9992;RSQ=0.9881;ERATE=0.0004;THETA=0.0001;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 79071316 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0973;AVGPOST=0.9967;RSQ=0.9839;ERATE=0.0003;THETA=0.0014;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 79071331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0112;AVGPOST=0.9989;RSQ=0.9623;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79071392 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9437;AVGPOST=0.9984;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=2062;AN=2184 GT:DS:GL:BD 0.94413918 1
1 79071484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2357;AVGPOST=0.9975;RSQ=0.9950;ERATE=0.0004;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 79071585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79071744 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79071829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2604;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 79071878 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6933;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79071886 rs34215302 T TG 1928 PASS INDEL;BAVGPOST=0.981;BRSQ=0.883;LDAF=0.0875;AVGPOST=0.9792;RSQ=0.8999;ERATE=0.0019;THETA=0.0006;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 79071980 . G GT 57 PASS INDEL;BAVGPOST=0.993;BRSQ=0.219;LDAF=0.0069;AVGPOST=0.9915;RSQ=0.4957;ERATE=0.0006;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79071982 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8462;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79071985 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.6853;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79072016 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79072161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0058;AVGPOST=0.9981;RSQ=0.8813;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79072283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9987;RSQ=0.9170;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79072300 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9055;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79072366 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7774;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79072403 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0206;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 79072412 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1213;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0005;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 79072419 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5886;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79072420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79072436 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79072454 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9384;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79072510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0165;AVGPOST=0.9995;RSQ=0.9884;ERATE=0.0003;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79072530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5160;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79072531 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79072546 . G GGGA 526 PASS INDEL;BAVGPOST=0.993;BRSQ=0.577;LDAF=0.0185;AVGPOST=0.9938;RSQ=0.8626;ERATE=0.0005;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 79072650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79072652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9024;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79072653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5992;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79072654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8923;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79072657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0818;AVGPOST=0.9975;RSQ=0.9879;ERATE=0.0004;THETA=0.0004;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 79072658 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0829;AVGPOST=0.9977;RSQ=0.9887;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 79072718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8926;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79072749 . CAG C 3039 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0005;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79072796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79072880 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7910;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79073059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0198;AVGPOST=0.9996;RSQ=0.9912;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 79073169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.934;LDAF=0.0334;AVGPOST=0.9957;RSQ=0.9527;ERATE=0.0004;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 79073192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0807;AVGPOST=0.9988;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 79073208 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79073316 . GA G 103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6474;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79073603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0809;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0006;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 79073676 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79073738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9997;RSQ=0.9847;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79073800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79073858 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79073880 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79073948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0168;AVGPOST=0.9993;RSQ=0.9858;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79074021 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79074079 . GA G 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79074136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0892;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 79074279 rs71569885 C CAATT 12769 PASS INDEL;BAVGPOST=0.990;BRSQ=0.960;LDAF=0.1220;AVGPOST=0.9956;RSQ=0.9814;ERATE=0.0010;THETA=0.0005;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 79074318 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1083;AVGPOST=0.9988;RSQ=0.9940;ERATE=0.0004;THETA=0.0006;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 79074338 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.750;LDAF=0.0048;AVGPOST=0.9965;RSQ=0.7198;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79074343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9145;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79074383 . CAA C 21 PASS INDEL;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6122;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79074445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8148;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79074567 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1507;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 79074631 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79074742 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79074744 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9808;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79074865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5391;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79074890 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0798;AVGPOST=0.9985;RSQ=0.9928;ERATE=0.0003;THETA=0.0006;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 79075014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7444;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79075025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79075041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0809;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 79075170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5169;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79075192 . G GA 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.459;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4159;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79075346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79075378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0223;AVGPOST=0.9974;RSQ=0.9537;ERATE=0.0005;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79075472 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0251;AVGPOST=0.9968;RSQ=0.9601;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 79075517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0105;AVGPOST=0.9995;RSQ=0.9794;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79075578 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8545;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79075680 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79075683 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.535;LDAF=0.0086;AVGPOST=0.9906;RSQ=0.5674;ERATE=0.0009;THETA=0.0045;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79075870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7130;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79076008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79076269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0819;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 79076346 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79076351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79076403 . G GCT 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79076403 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8384;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79076493 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7774;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79076524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4117;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0006;THETA=0.0003;AC=898;AN=2184 GT:DS:GL:BD 0.41117215 0
1 79076525 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79076631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1456;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 79076761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8887;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79076775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79076795 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.715;LDAF=0.0006;AVGPOST=0.9988;RSQ=0.1721;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79076946 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.7085;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79077134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.881;LDAF=0.0129;AVGPOST=0.9984;RSQ=0.9447;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79077328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79077404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79077427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8667;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79077439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9268;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79077449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9430;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79077471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2682;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 79077486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79077533 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7926;ERATE=0.0011;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79077535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79077542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79077548 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3788;AVGPOST=0.9945;RSQ=0.9916;ERATE=0.0007;THETA=0.0003;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 79077615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7117;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79077627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79077741 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79077750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9814;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79077811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79077914 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.788;LDAF=0.0080;AVGPOST=0.9980;RSQ=0.8971;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79078062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8301;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79078094 . G GC 666 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9990;RSQ=0.9372;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79078096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0192;AVGPOST=0.9989;RSQ=0.9757;ERATE=0.0005;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79078123 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9705;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79078364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0088;AVGPOST=0.9976;RSQ=0.8806;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79078380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.9345;AVGPOST=0.9984;RSQ=0.9891;ERATE=0.0005;THETA=0.0005;AC=2042;AN=2184 GT:DS:GL:BD 0.93498170 1
1 79078440 . CT C 108 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4007;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79078542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79078545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9088;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79078556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.973;LDAF=0.1841;AVGPOST=0.9959;RSQ=0.9896;ERATE=0.0007;THETA=0.0012;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 79078866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0073;AVGPOST=0.9969;RSQ=0.8348;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79078875 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0282;AVGPOST=0.9970;RSQ=0.9595;ERATE=0.0004;THETA=0.0005;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79078881 . A AG 365 PASS INDEL;BAVGPOST=0.988;BRSQ=0.518;LDAF=0.0206;AVGPOST=0.9798;RSQ=0.6087;ERATE=0.0020;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79078962 . AAG A 321 PASS INDEL;BAVGPOST=0.966;BRSQ=0.416;LDAF=0.0559;AVGPOST=0.9268;RSQ=0.4754;ERATE=0.0022;THETA=0.0009;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 79078977 . G GGAAGGAAT 19330 PASS INDEL;BAVGPOST=0.722;BRSQ=0.509;LDAF=0.3997;AVGPOST=0.7431;RSQ=0.5831;ERATE=0.0322;THETA=0.0004;AC=814;AN=2184 GT:DS:GL:BD 0.37271062 0
1 79078979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0384;AVGPOST=0.9840;RSQ=0.8345;ERATE=0.0012;THETA=0.0008;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 79079058 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.935;LDAF=0.3165;AVGPOST=0.9841;RSQ=0.9736;ERATE=0.0011;THETA=0.0007;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 79079061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.384;LDAF=0.0042;AVGPOST=0.9941;RSQ=0.4068;ERATE=0.0011;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79079071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.373;LDAF=0.0176;AVGPOST=0.9739;RSQ=0.4055;ERATE=0.0013;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79079293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.663;BRSQ=0.264;LDAF=0.6374;AVGPOST=0.6619;RSQ=0.3508;ERATE=0.0584;THETA=0.0004;AC=1543;AN=2184 GT:DS:GL:BD 0.70650184 1
1 79079333 rs71026606 CA C 312 PASS INDEL;BAVGPOST=0.630;BRSQ=0.263;LDAF=0.3478;AVGPOST=0.7204;RSQ=0.5247;ERATE=0.0135;THETA=0.0006;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 79079337 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.243;LDAF=0.0327;AVGPOST=0.9493;RSQ=0.4045;ERATE=0.0031;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79079394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.214;LDAF=0.0515;AVGPOST=0.9257;RSQ=0.4186;ERATE=0.0043;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79079398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.480;LDAF=0.0067;AVGPOST=0.9905;RSQ=0.4261;ERATE=0.0009;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79079456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.913;LDAF=0.0469;AVGPOST=0.9953;RSQ=0.9567;ERATE=0.0007;THETA=0.0015;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 79079459 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8435;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79079564 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.557;LDAF=0.0053;AVGPOST=0.9960;RSQ=0.7079;ERATE=0.0006;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79079604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.845;LDAF=0.0108;AVGPOST=0.9972;RSQ=0.9020;ERATE=0.0004;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79079612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9810;AVGPOST=0.9995;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=2143;AN=2184 GT:DS:GL:BD 0.98122710 1
1 79079663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3786;AVGPOST=0.9966;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 79079867 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.6967;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79079929 . TAC T 198 PASS INDEL;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5758;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79079996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6082;ERATE=0.0007;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79080010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0085;AVGPOST=0.9964;RSQ=0.8384;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79080124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5907;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79080318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.703;LDAF=0.0133;AVGPOST=0.9922;RSQ=0.7649;ERATE=0.0004;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79080349 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9991;RSQ=0.9628;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79080374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8223;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79080409 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5630;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79080542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79080575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0445;AVGPOST=0.9980;RSQ=0.9839;ERATE=0.0003;THETA=0.0002;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 79080609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4752;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79080740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8244;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79080800 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2088;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=456;AN=2184 GT:DS:GL:BD 0.20879121 0
1 79080813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0143;AVGPOST=0.9984;RSQ=0.9515;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79080815 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1853;AVGPOST=0.9982;RSQ=0.9957;ERATE=0.0006;THETA=0.0003;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 79080818 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0100;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0015;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79080909 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3794;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 79081054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8940;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79081066 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79081098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0033;AVGPOST=0.9971;RSQ=0.6737;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79081125 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3793;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=829;AN=2184 GT:DS:GL:BD 0.37957877 0
1 79081307 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79081354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2756;AVGPOST=0.9969;RSQ=0.9951;ERATE=0.0004;THETA=0.0007;AC=601;AN=2184 GT:DS:GL:BD 0.27518314 0
1 79081358 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79081454 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6428;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79081502 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6459;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79081524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7138;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1559;AN=2184 GT:DS:GL:BD 0.71382785 1
1 79081550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79081553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7658;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79081570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7671;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79081761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79081814 . TC T 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5103;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79081904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8236;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79081905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6337;ERATE=0.0006;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79081931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5692;ERATE=0.0009;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79082002 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9227;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79082191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79082204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5072;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79082236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0370;AVGPOST=0.9986;RSQ=0.9872;ERATE=0.0004;THETA=0.0009;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 79082309 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4709;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79082337 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7162;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79082571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5110;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79082767 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7556;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79082884 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4518;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79082991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79082994 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5062;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79083251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5548;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79083324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4807;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79083461 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79083784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7528;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79083824 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0136;AVGPOST=0.9984;RSQ=0.9469;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79083831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6694;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79083885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.9929;AVGPOST=0.9938;RSQ=0.6443;ERATE=0.0006;THETA=0.0015;AC=2174;AN=2184 GT:DS:GL:BD 0.99542123 1
1 79083958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.700;LDAF=0.0049;AVGPOST=0.9920;RSQ=0.3413;ERATE=0.0018;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79083981 . AAAAT A 176 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4128;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79084147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79084211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79084533 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4861;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79084760 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4008;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79084901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8810;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79084935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0322;AVGPOST=0.9965;RSQ=0.9611;ERATE=0.0005;THETA=0.0009;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 79084979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79085129 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4818;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79085215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0034;AVGPOST=0.9952;RSQ=0.3756;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79085367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.704;LDAF=0.0041;AVGPOST=0.9943;RSQ=0.4149;ERATE=0.0011;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79085371 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4596;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79085425 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4431;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79085509 rs112152589 A AAAAT 1728 PASS INDEL;BAVGPOST=0.993;BRSQ=0.767;LDAF=0.0207;AVGPOST=0.9899;RSQ=0.8238;ERATE=0.0010;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79085601 . T TAAAC 783 PASS INDEL;BAVGPOST=0.994;BRSQ=0.782;LDAF=0.0177;AVGPOST=0.9925;RSQ=0.8600;ERATE=0.0007;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79085613 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8626;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79085662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.4043;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79085881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7158;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79086064 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4251;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79086074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0075;AVGPOST=0.9936;RSQ=0.6449;ERATE=0.0005;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79086113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.5913;ERATE=0.0014;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79086206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8515;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79086322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5458;ERATE=0.0004;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79086373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9119;ERATE=0.0003;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79086446 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7604;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79086489 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0144;AVGPOST=0.9993;RSQ=0.9784;ERATE=0.0004;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79086585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79086749 . CTGT C 14934 PASS INDEL;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.3217;AVGPOST=0.9498;RSQ=0.9125;ERATE=0.0062;THETA=0.0005;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 79086874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4806;AVGPOST=0.9935;RSQ=0.9897;ERATE=0.0006;THETA=0.0006;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 79087144 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9993;RSQ=0.9616;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79087150 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.0971;AVGPOST=0.9953;RSQ=0.9837;ERATE=0.0003;THETA=0.0012;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 79087156 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79087195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0094;AVGPOST=0.9984;RSQ=0.9329;ERATE=0.0004;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79087220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0125;AVGPOST=0.9961;RSQ=0.8858;ERATE=0.0004;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79087267 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1700;AVGPOST=0.9953;RSQ=0.9883;ERATE=0.0011;THETA=0.0008;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 79087286 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.9061;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79087290 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79087494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79087569 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7918;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79087708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79087732 . AAG A 2935 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9994;RSQ=0.9840;ERATE=0.0004;THETA=0.0010;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79087812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2876;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0004;THETA=0.0012;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 79087820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5903;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79087955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9806;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79087975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79088004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0230;AVGPOST=0.9998;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79088036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0274;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0003;THETA=0.0008;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 79088067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.773;LDAF=0.0062;AVGPOST=0.9961;RSQ=0.7446;ERATE=0.0007;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79088153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1696;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0005;THETA=0.0006;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 79088221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5390;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79088309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8830;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79088499 . AT A 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.650;LDAF=0.0025;AVGPOST=0.9985;RSQ=0.7320;ERATE=0.0005;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79088546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0031;AVGPOST=0.9969;RSQ=0.5629;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79088646 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0059;AVGPOST=0.9944;RSQ=0.6114;ERATE=0.0021;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79088684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6684;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79088813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1702;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0007;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 79088994 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79089177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79089209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9982;RSQ=0.6714;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79089280 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7311;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79089394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.428;LDAF=0.0075;AVGPOST=0.9881;RSQ=0.3782;ERATE=0.0026;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79089440 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0972;AVGPOST=0.9956;RSQ=0.9815;ERATE=0.0011;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 79089575 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79089643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0225;AVGPOST=0.9987;RSQ=0.9752;ERATE=0.0005;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79089645 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9707;ERATE=0.0004;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79089752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0033;AVGPOST=0.9975;RSQ=0.7111;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79089781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9971;RSQ=0.8841;ERATE=0.0007;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79089815 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79089872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7397;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79089878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7925;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79089879 . A AAAC 2492 PASS INDEL;BAVGPOST=0.988;BRSQ=0.784;LDAF=0.0346;AVGPOST=0.9790;RSQ=0.7369;ERATE=0.0039;THETA=0.0011;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79089882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79089892 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4943;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79089937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79090000 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79090014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1421;AVGPOST=0.9984;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 79090078 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1855;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0005;THETA=0.0023;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 79090187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.4688;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79090250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9794;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79090280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79090345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79090350 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0167;AVGPOST=0.9902;RSQ=0.7932;ERATE=0.0010;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79090508 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.365;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5706;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79090527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.958;LDAF=0.1692;AVGPOST=0.9944;RSQ=0.9839;ERATE=0.0008;THETA=0.0006;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 79090646 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1428;AVGPOST=0.9968;RSQ=0.9896;ERATE=0.0005;THETA=0.0020;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 79090747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79090749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.865;LDAF=0.9008;AVGPOST=0.9689;RSQ=0.8720;ERATE=0.0009;THETA=0.0021;AC=1980;AN=2184 GT:DS:GL:BD 0.90659338 1
1 79090788 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.894;LDAF=0.0437;AVGPOST=0.9905;RSQ=0.9208;ERATE=0.0010;THETA=0.0011;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 79090944 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0106;AVGPOST=0.9973;RSQ=0.8934;ERATE=0.0006;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79090989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.628;LDAF=0.0038;AVGPOST=0.9942;RSQ=0.4197;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79091002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5722;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79091084 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0080;AVGPOST=0.9986;RSQ=0.9193;ERATE=0.0005;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79091296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2398;AVGPOST=0.9972;RSQ=0.9945;ERATE=0.0004;THETA=0.0006;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 79091403 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5489;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79091406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9813;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79091421 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6343;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79091453 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79091485 . GTC G 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0043;AVGPOST=0.9972;RSQ=0.7574;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79091622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.8474;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79091699 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0285;AVGPOST=0.9988;RSQ=0.9851;ERATE=0.0003;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79091727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9806;ERATE=0.0003;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79091867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79091870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79091912 . AG A 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4192;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79092026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8874;ERATE=0.0004;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79092052 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1695;AVGPOST=0.9971;RSQ=0.9918;ERATE=0.0004;THETA=0.0034;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 79092056 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6185;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79092241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1291;AVGPOST=0.9899;RSQ=0.9655;ERATE=0.0005;THETA=0.0009;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 79092488 . CA C 150 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5213;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79092528 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0491;AVGPOST=0.9983;RSQ=0.9835;ERATE=0.0005;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 79092581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79092744 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79092891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6893;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79093242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0329;AVGPOST=0.9966;RSQ=0.9601;ERATE=0.0005;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 79093375 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7118;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79093502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0046;AVGPOST=0.9959;RSQ=0.6636;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79093515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1230;AVGPOST=0.9990;RSQ=0.9961;ERATE=0.0004;THETA=0.0008;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 79093669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8851;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79093699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0481;AVGPOST=0.9988;RSQ=0.9882;ERATE=0.0003;THETA=0.0013;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 79093719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5634;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79093735 . G GT 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5273;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79093822 . AT A 70 PASS INDEL;BAVGPOST=0.966;BRSQ=0.351;LDAF=0.0470;AVGPOST=0.9348;RSQ=0.4181;ERATE=0.0136;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 79094047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0753;AVGPOST=0.9973;RSQ=0.9828;ERATE=0.0007;THETA=0.0007;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 79094090 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5825;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79094188 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79094269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0022;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79094370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8313;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79094454 . GC G 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79094469 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79094473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5427;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79095000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8747;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79095012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79095017 . C CTCATGCCTGTAA 426 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7681;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79095020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.6143;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79095042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8467;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79095150 . CAG C 1193 PASS INDEL;BAVGPOST=0.997;BRSQ=0.760;LDAF=0.0102;AVGPOST=0.9931;RSQ=0.7437;ERATE=0.0014;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79095259 . GT G 1262 PASS INDEL;BAVGPOST=0.994;BRSQ=0.825;LDAF=0.0146;AVGPOST=0.9954;RSQ=0.8728;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79095406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79095459 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.739;LDAF=0.0340;AVGPOST=0.9722;RSQ=0.6779;ERATE=0.0160;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 79095497 . A AG 1571 PASS INDEL;BAVGPOST=0.994;BRSQ=0.944;LDAF=0.0489;AVGPOST=0.9989;RSQ=0.9886;ERATE=0.0004;THETA=0.0008;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 79095509 . A AAAC 1720 PASS INDEL;BAVGPOST=0.992;BRSQ=0.923;LDAF=0.0545;AVGPOST=0.9947;RSQ=0.9605;ERATE=0.0005;THETA=0.0008;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 79095575 . A AC 5553 PASS INDEL;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0541;AVGPOST=0.9963;RSQ=0.9722;ERATE=0.0004;THETA=0.0014;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 79095577 . A AC 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5982;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79095578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7159;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79095816 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0361;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 79095872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79096058 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7872;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79096105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1237;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0004;THETA=0.0013;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 79096128 . T TG 285 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0044;AVGPOST=0.9968;RSQ=0.6960;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79096223 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79096229 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0317;AVGPOST=0.9987;RSQ=0.9818;ERATE=0.0005;THETA=0.0009;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 79096579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.806;LDAF=0.0148;AVGPOST=0.9910;RSQ=0.7914;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79096581 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0365;AVGPOST=0.9992;RSQ=0.9898;ERATE=0.0004;THETA=0.0014;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 79096589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8202;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79096605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.777;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79096621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6797;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79096717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0494;AVGPOST=0.9984;RSQ=0.9845;ERATE=0.0006;THETA=0.0010;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 79096746 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5034;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79096747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1236;AVGPOST=0.9986;RSQ=0.9948;ERATE=0.0003;THETA=0.0008;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 79096951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7416;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79097031 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0020;AVGPOST=0.9983;RSQ=0.7167;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79097068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0271;AVGPOST=0.9996;RSQ=0.9940;ERATE=0.0003;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79097077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7206;ERATE=0.0004;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79097088 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0272;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0009;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79097116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.8280;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79097117 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79097214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79097290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7569;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79097429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0174;AVGPOST=0.9980;RSQ=0.9466;ERATE=0.0007;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79097512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0088;AVGPOST=0.9992;RSQ=0.9591;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79097620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0160;AVGPOST=0.9988;RSQ=0.9667;ERATE=0.0005;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79097853 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9544;AVGPOST=0.9952;RSQ=0.9598;ERATE=0.0006;THETA=0.0005;AC=2086;AN=2184 GT:DS:GL:BD 0.95512819 1
1 79097917 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2185;AVGPOST=0.9947;RSQ=0.9877;ERATE=0.0005;THETA=0.0007;AC=476;AN=2184 GT:DS:GL:BD 0.21794872 0
1 79097951 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8041;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79098150 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0210;AVGPOST=0.9979;RSQ=0.9578;ERATE=0.0005;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 79098205 . AT A 355 PASS INDEL;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0176;AVGPOST=0.9964;RSQ=0.9165;ERATE=0.0005;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79098248 . T TA 8 PASS INDEL;BAVGPOST=0.997;BRSQ=0.746;LDAF=0.0069;AVGPOST=0.9949;RSQ=0.7116;ERATE=0.0007;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79098249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9366;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79098380 rs112969848 CT C 648 PASS INDEL;BAVGPOST=0.997;BRSQ=0.910;LDAF=0.0246;AVGPOST=0.9858;RSQ=0.7685;ERATE=0.0016;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79098387 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4672;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79098484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0031;AVGPOST=0.9959;RSQ=0.4850;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79098496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3426;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79098546 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0045;AVGPOST=0.9947;RSQ=0.5873;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79098605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79098640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79098662 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79098849 . CAAAGGT C 661 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79098852 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9993;RSQ=0.9772;ERATE=0.0003;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79098920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7565;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79098986 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3677;AVGPOST=0.9966;RSQ=0.9938;ERATE=0.0004;THETA=0.0003;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 79098997 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9589;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79099049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9998;RSQ=0.9735;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79099132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0040;AVGPOST=0.9988;RSQ=0.8717;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79099238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0172;AVGPOST=0.9985;RSQ=0.9704;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79099251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8651;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79099354 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6940;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79099409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79099536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9137;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79099574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4774;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79099885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79099902 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0238;AVGPOST=0.9932;RSQ=0.8957;ERATE=0.0004;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 79099920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0022;AVGPOST=0.9994;RSQ=0.8804;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79099934 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0202;AVGPOST=0.9995;RSQ=0.9904;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 79100036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0160;AVGPOST=0.9988;RSQ=0.9672;ERATE=0.0004;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79100044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0150;AVGPOST=0.9984;RSQ=0.9530;ERATE=0.0006;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79100200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0197;AVGPOST=0.9997;RSQ=0.9928;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79100235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3321;AVGPOST=0.9950;RSQ=0.9906;ERATE=0.0007;THETA=0.0004;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 79100499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4335;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79100535 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0072;AVGPOST=0.9964;RSQ=0.8167;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79100636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7199;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79100642 . TTC T 152 PASS INDEL;BAVGPOST=0.998;BRSQ=0.754;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5996;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79100668 . T TA 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6895;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79100717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1244;AVGPOST=0.9986;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 79100725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5335;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79100790 rs113823252 CTTCAA C 14603 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1243;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 79100854 rs112572613 C CA 1618 PASS INDEL;BAVGPOST=0.985;BRSQ=0.712;LDAF=0.0395;AVGPOST=0.9649;RSQ=0.6249;ERATE=0.0051;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79101039 . AAAAAAC A 355 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9015;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79101042 . AAC A 12632 PASS INDEL;BAVGPOST=0.963;BRSQ=0.925;LDAF=0.3247;AVGPOST=0.9664;RSQ=0.9418;ERATE=0.0056;THETA=0.0005;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 79101046 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0396;AVGPOST=0.9990;RSQ=0.9909;ERATE=0.0003;THETA=0.0010;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 79101177 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79101204 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.3271;AVGPOST=0.9933;RSQ=0.9887;ERATE=0.0004;THETA=0.0002;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 79101321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.3274;AVGPOST=0.9933;RSQ=0.9889;ERATE=0.0003;THETA=0.0006;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 79101326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9549;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79101398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0080;AVGPOST=0.9952;RSQ=0.7793;ERATE=0.0008;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79101493 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.4877;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79101513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79101540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79101556 . A AG 36 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0031;AVGPOST=0.9964;RSQ=0.5964;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79101644 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0093;AVGPOST=0.9977;RSQ=0.9167;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79101794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0092;AVGPOST=0.9981;RSQ=0.9330;ERATE=0.0003;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79101795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0197;AVGPOST=0.9995;RSQ=0.9890;ERATE=0.0005;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79101889 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0052;AVGPOST=0.9968;RSQ=0.7712;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79102075 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0160;AVGPOST=0.9991;RSQ=0.9748;ERATE=0.0005;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79102161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0263;AVGPOST=0.9981;RSQ=0.9711;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79102259 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0126;AVGPOST=0.9973;RSQ=0.9147;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79102425 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.4292;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79102508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9502;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79102541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3972;AVGPOST=0.9977;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 79102618 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0910;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 79102661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9650;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79102732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79102761 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9593;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79102968 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79103181 . ATAAGT A 620 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9880;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79103290 . A AC 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4920;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79103516 . T TG 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5038;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79103563 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79103628 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79103640 . T TA 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6347;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79103643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9274;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79103739 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6913;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79103810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5764;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79103862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8308;AVGPOST=0.9975;RSQ=0.9928;ERATE=0.0005;THETA=0.0004;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 79104124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8308;AVGPOST=0.9982;RSQ=0.9947;ERATE=0.0006;THETA=0.0005;AC=1814;AN=2184 GT:DS:GL:BD 0.83058608 1
1 79104233 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7023;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79104244 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5149;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79104487 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7571;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79104680 . AC A 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7864;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79104712 . AT A 445 PASS INDEL;BAVGPOST=0.802;BRSQ=0.227;LDAF=0.2046;AVGPOST=0.7362;RSQ=0.3143;ERATE=0.0404;THETA=0.0006;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 79104766 . TATA T 234 PASS INDEL;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0033;AVGPOST=0.9985;RSQ=0.7980;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79104960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.8249;AVGPOST=0.9843;RSQ=0.9587;ERATE=0.0021;THETA=0.0008;AC=1806;AN=2184 GT:DS:GL:BD 0.82692307 1
1 79104971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0074;AVGPOST=0.9903;RSQ=0.4941;ERATE=0.0006;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79105036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.735;LDAF=0.0195;AVGPOST=0.9873;RSQ=0.7515;ERATE=0.0008;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79105353 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7570;ERATE=0.0007;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79105366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.937;LDAF=0.2994;AVGPOST=0.9521;RSQ=0.9182;ERATE=0.0093;THETA=0.0004;AC=651;AN=2184 GT:DS:GL:BD 0.29807693 0
1 79105383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9952;RSQ=0.5568;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79105518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0914;AVGPOST=0.9986;RSQ=0.9926;ERATE=0.0005;THETA=0.0005;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 79105624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8284;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79105788 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0031;AVGPOST=0.9980;RSQ=0.7869;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79105854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8800;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79105855 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8054;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79105887 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79105970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.8092;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79106120 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79106287 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79106395 . CTT C 424 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79106451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0909;AVGPOST=0.9991;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 79106531 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5199;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79106541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.778;LDAF=0.0077;AVGPOST=0.9982;RSQ=0.8989;ERATE=0.0005;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79106649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7880;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79106652 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0481;AVGPOST=0.9949;RSQ=0.9554;ERATE=0.0006;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 79106669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0047;AVGPOST=0.9957;RSQ=0.6775;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79106790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79106797 . A AG 244 PASS INDEL;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.9034;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79106819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79106876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0072;AVGPOST=0.9983;RSQ=0.9021;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79106884 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79106918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0560;AVGPOST=0.9989;RSQ=0.9921;ERATE=0.0004;THETA=0.0005;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 79106945 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6323;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79106979 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.961;LDAF=0.6975;AVGPOST=0.9583;RSQ=0.9292;ERATE=0.0128;THETA=0.0004;AC=1536;AN=2184 GT:DS:GL:BD 0.70329672 1
1 79107040 rs113258446 G GAATGC 40883 PASS INDEL;BAVGPOST=0.914;BRSQ=0.277;LDAF=0.9032;AVGPOST=0.8592;RSQ=0.3710;ERATE=0.0189;THETA=0.0007;AC=2082;AN=2184 GT:DS:GL:BD 0.95329672 1
1 79107084 . T TGCAAG 28070 PASS INDEL;BAVGPOST=0.870;BRSQ=0.367;LDAF=0.8229;AVGPOST=0.7870;RSQ=0.4064;ERATE=0.0428;THETA=0.0006;AC=1968;AN=2184 GT:DS:GL:BD 0.90109891 1
1 79107087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0111;AVGPOST=0.9978;RSQ=0.9206;ERATE=0.0005;THETA=0.0009;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79107182 . GC G 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.2773;ERATE=0.0008;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79107187 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79107252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6856;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79107400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7887;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79107701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6983;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79107702 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0084;AVGPOST=0.9994;RSQ=0.9680;ERATE=0.0002;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79107779 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79107780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4372;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 79107800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5556;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79107879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9628;ERATE=0.0002;THETA=0.0021;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79107894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4367;AVGPOST=0.9968;RSQ=0.9958;ERATE=0.0005;THETA=0.0005;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 79107964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79108017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79108076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0140;AVGPOST=0.9995;RSQ=0.9838;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79108115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9991;RSQ=0.9747;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79108131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4335;AVGPOST=0.9964;RSQ=0.9949;ERATE=0.0004;THETA=0.0005;AC=946;AN=2184 GT:DS:GL:BD 0.43315017 0
1 79108174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79108199 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6172;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79108257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79108261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79108422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79108738 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8501;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79108971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79109030 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4549;AVGPOST=0.9939;RSQ=0.9913;ERATE=0.0004;THETA=0.0006;AC=991;AN=2184 GT:DS:GL:BD 0.45375457 0
1 79109117 . ATACT A 2328 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0138;AVGPOST=0.9993;RSQ=0.9772;ERATE=0.0003;THETA=0.0013;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79109140 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0148;AVGPOST=0.9994;RSQ=0.9824;ERATE=0.0004;THETA=0.0009;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79109211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9916;ERATE=0.0003;THETA=0.0008;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79109243 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79109257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79109386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0638;AVGPOST=0.9975;RSQ=0.9859;ERATE=0.0003;THETA=0.0008;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 79109413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79109443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79109459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6787;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79109485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9911;ERATE=0.0003;THETA=0.0013;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79109601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79109728 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5123;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79109755 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6127;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79109865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0145;AVGPOST=0.9994;RSQ=0.9803;ERATE=0.0004;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79109887 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79109897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0174;AVGPOST=0.9992;RSQ=0.9803;ERATE=0.0004;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79109957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1090;AVGPOST=0.9972;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 79110071 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9176;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79110131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79110152 . TCA T 180 PASS INDEL;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8220;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79110213 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79110222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5632;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79110279 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79110408 . GC G 81 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0130;AVGPOST=0.9989;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79110451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0140;AVGPOST=0.9981;RSQ=0.9468;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79110458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79110563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79110645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4247;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79110819 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4523;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79110830 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4885;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79110831 rs111968441 TC T 5380 PASS INDEL;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0798;AVGPOST=0.9951;RSQ=0.9725;ERATE=0.0007;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 79110943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0022;AVGPOST=0.9973;RSQ=0.4822;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79110962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0141;AVGPOST=0.9991;RSQ=0.9734;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79110979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.7886;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79111061 . CTG C 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.4896;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79111146 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8055;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79111215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79111233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79111234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0002;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79111297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8842;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79111320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8461;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79111322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0140;AVGPOST=0.9995;RSQ=0.9822;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79111436 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6198;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79111445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79111463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0633;AVGPOST=0.9985;RSQ=0.9903;ERATE=0.0003;THETA=0.0013;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 79111527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9757;ERATE=0.0002;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79111613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79111704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.8985;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79111774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5852;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79111797 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8926;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79111798 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9702;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79111829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79111882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9879;ERATE=0.0002;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79112076 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79112120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9793;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79112190 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8872;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79112222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0232;AVGPOST=0.9993;RSQ=0.9874;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79112270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79112308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0279;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0020;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79112325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9061;AVGPOST=0.9987;RSQ=0.9940;ERATE=0.0004;THETA=0.0024;AC=1979;AN=2184 GT:DS:GL:BD 0.90613556 1
1 79112574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8809;ERATE=0.0003;THETA=0.0040;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79112575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9067;AVGPOST=0.9975;RSQ=0.9895;ERATE=0.0004;THETA=0.0013;AC=1981;AN=2184 GT:DS:GL:BD 0.90705127 1
1 79112670 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.9850;AVGPOST=0.9968;RSQ=0.9145;ERATE=0.0006;THETA=0.0012;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 79112705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0036;AVGPOST=0.9975;RSQ=0.7366;ERATE=0.0004;THETA=0.0034;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79112754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7269;AVGPOST=0.9945;RSQ=0.9905;ERATE=0.0005;THETA=0.0018;AC=1588;AN=2184 GT:DS:GL:BD 0.72710621 1
1 79112800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.804;LDAF=0.0485;AVGPOST=0.9804;RSQ=0.8404;ERATE=0.0007;THETA=0.0011;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 79112822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7652;ERATE=0.0005;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79112850 rs113920955 A AG 166 PASS INDEL;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0079;AVGPOST=0.9962;RSQ=0.8177;ERATE=0.0007;THETA=0.0019;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79112867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7388;ERATE=0.0003;THETA=0.0039;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79112868 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0038;AVGPOST=0.9965;RSQ=0.6191;ERATE=0.0008;THETA=0.0071;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79112937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79112971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9099;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79112990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.6685;AVGPOST=0.9810;RSQ=0.9720;ERATE=0.0012;THETA=0.0064;AC=1466;AN=2184 GT:DS:GL:BD 0.67124540 1
1 79113127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9506;ERATE=0.0003;THETA=0.0040;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79113159 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.5485;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79113215 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79113240 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9737;ERATE=0.0003;THETA=0.0014;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79113288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0978;AVGPOST=0.9958;RSQ=0.9866;ERATE=0.0003;THETA=0.0069;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 79113348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.3199;AVGPOST=0.9883;RSQ=0.9821;ERATE=0.0007;THETA=0.0352;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 79113388 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0150;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79113426 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.969;LDAF=0.0872;AVGPOST=0.9924;RSQ=0.9718;ERATE=0.0003;THETA=0.0017;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 79113441 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.969;LDAF=0.0870;AVGPOST=0.9919;RSQ=0.9708;ERATE=0.0005;THETA=0.0204;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 79113442 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9347;ERATE=0.0003;THETA=0.0196;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79113503 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0142;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79113537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.940;LDAF=0.0352;AVGPOST=0.9960;RSQ=0.9547;ERATE=0.0005;THETA=0.0014;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 79113693 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0003;THETA=0.0206;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79113711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8519;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79113724 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0184;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79113895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5058;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79113953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4009;ERATE=0.0006;THETA=0.0131;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79113999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.936;LDAF=0.5161;AVGPOST=0.9373;RSQ=0.9229;ERATE=0.0008;THETA=0.0051;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 79114102 . C CA 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.5878;ERATE=0.0007;THETA=0.0145;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79114221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9667;ERATE=0.0004;THETA=0.0137;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79114277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8642;ERATE=0.0003;THETA=0.0072;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79114358 . AG A 1245 PASS INDEL;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0049;AVGPOST=0.9975;RSQ=0.7857;ERATE=0.0006;THETA=0.0027;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79114454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8882;ERATE=0.0003;THETA=0.0096;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79114468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9456;ERATE=0.0003;THETA=0.0156;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79114534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5383;AVGPOST=0.9899;RSQ=0.9862;ERATE=0.0006;THETA=0.0012;AC=1172;AN=2184 GT:DS:GL:BD 0.53663003 1
1 79114542 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79114571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9700;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79114593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9473;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79114624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0221;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0003;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79114730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0003;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79114813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9263;ERATE=0.0007;THETA=0.0036;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79114816 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5321;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79114923 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8619;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79115043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5319;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79115143 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7652;ERATE=0.0007;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79115217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9200;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79115317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8724;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79115542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0003;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79115634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0023;AVGPOST=0.9980;RSQ=0.6504;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79115643 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0029;AVGPOST=0.9975;RSQ=0.7011;ERATE=0.0008;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79115713 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7873;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79115714 . A AT 2440 PASS INDEL;BAVGPOST=0.598;BRSQ=0.288;LDAF=0.5337;AVGPOST=0.6324;RSQ=0.3659;ERATE=0.0412;THETA=0.0027;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 79115751 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.973;LDAF=0.5876;AVGPOST=0.9843;RSQ=0.9767;ERATE=0.0007;THETA=0.0012;AC=1289;AN=2184 GT:DS:GL:BD 0.59020144 1
1 79115882 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79116029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8720;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79116069 . TCA T 109 PASS INDEL;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9180;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79116111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8709;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79116172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7506;ERATE=0.0006;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79116277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79116278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9443;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79116337 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9217;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79116379 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6577;ERATE=0.0007;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79116488 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5866;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79116618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9614;ERATE=0.0003;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79116742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79116763 . TC T 372 PASS INDEL;BAVGPOST=0.981;BRSQ=0.605;LDAF=0.0348;AVGPOST=0.9748;RSQ=0.7065;ERATE=0.0014;THETA=0.0012;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79116812 . TTC T 20 PASS INDEL;BAVGPOST=0.993;BRSQ=0.458;LDAF=0.0101;AVGPOST=0.9891;RSQ=0.5915;ERATE=0.0011;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79116815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.888;BRSQ=0.752;LDAF=0.3745;AVGPOST=0.8798;RSQ=0.7815;ERATE=0.0170;THETA=0.0017;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 79116827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0093;AVGPOST=0.9974;RSQ=0.8873;ERATE=0.0006;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79116894 . T TG 2308 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0288;AVGPOST=0.9982;RSQ=0.9748;ERATE=0.0006;THETA=0.0026;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79116963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5541;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79116972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79116991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9326;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79117003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0811;AVGPOST=0.9960;RSQ=0.9783;ERATE=0.0003;THETA=0.0007;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 79117083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9381;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79117235 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79117268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79117740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79117968 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4461;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79117969 . TCTC T 1086 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8417;ERATE=0.0004;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79118024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1140;AVGPOST=0.9963;RSQ=0.9869;ERATE=0.0004;THETA=0.0009;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 79118057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79118083 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7899;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79118287 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6973;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79118355 . C CG 37 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0037;AVGPOST=0.9961;RSQ=0.5939;ERATE=0.0004;THETA=0.0043;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79118411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9709;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79118463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7173;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79118517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79118544 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0088;AVGPOST=0.9975;RSQ=0.9084;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79118597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7331;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79118618 . TTTAC T 45 PASS INDEL;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4541;ERATE=0.0008;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79118711 . C CTTAT 130 PASS INDEL;BAVGPOST=0.999;BRSQ=0.648;LDAF=0.0027;AVGPOST=0.9964;RSQ=0.4607;ERATE=0.0006;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79118715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0047;AVGPOST=0.9973;RSQ=0.7947;ERATE=0.0004;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79118719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1432;AVGPOST=0.9969;RSQ=0.9902;ERATE=0.0004;THETA=0.0009;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 79118847 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0023;AVGPOST=0.9977;RSQ=0.5774;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79118904 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0033;AVGPOST=0.9954;RSQ=0.5575;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79118916 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5690;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79119038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.557;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.5483;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79119039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.656;LDAF=0.0250;AVGPOST=0.9737;RSQ=0.5768;ERATE=0.0105;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79119080 MERGED_DEL_2_2825 A ADELA . . SV;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0037;AVGPOST=0.9956;RSQ=0.5137;ERATE=0.0008;THETA=0.0009;CIEND=-17;33;CIPOS=-18;19;END=32700988;SOURCE=GenomeStrip_32698966_32700988;SVTYPE=DEL;AC=5;AN=21 GT:DS:GL:BD 0.00228938 0
1 79119089 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7250;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79119172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7495;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79119321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.885;LDAF=0.9759;AVGPOST=0.9909;RSQ=0.8509;ERATE=0.0005;THETA=0.0008;AC=2141;AN=2184 GT:DS:GL:BD 0.98031133 1
1 79119350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9181;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79119360 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79119391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79119726 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79119749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0009;AVGPOST=0.9986;RSQ=0.3568;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79119840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.832;LDAF=0.0045;AVGPOST=0.9972;RSQ=0.7605;ERATE=0.0006;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79119878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79119879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79119883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.700;LDAF=0.0039;AVGPOST=0.9975;RSQ=0.7310;ERATE=0.0005;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79119904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79120079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0099;AVGPOST=0.9976;RSQ=0.9113;ERATE=0.0004;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79120165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0094;AVGPOST=0.9989;RSQ=0.9439;ERATE=0.0005;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79120176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9996;RSQ=0.9842;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79120189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9995;RSQ=0.9756;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79120195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9992;RSQ=0.9570;ERATE=0.0004;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79120326 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79120329 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.8841;ERATE=0.0007;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79120537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7671;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79120579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79120604 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8131;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79120626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79120664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1429;AVGPOST=0.9987;RSQ=0.9955;ERATE=0.0003;THETA=0.0009;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 79120685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79120703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8192;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79120725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8267;ERATE=0.0003;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79120783 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5299;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79121041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6269;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79121116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0110;AVGPOST=0.9980;RSQ=0.9417;ERATE=0.0004;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79121428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7617;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79121545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6356;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79121711 . CA C 5951 PASS INDEL;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0212;AVGPOST=0.9979;RSQ=0.9650;ERATE=0.0005;THETA=0.0010;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 79122152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9704;ERATE=0.0003;THETA=0.0021;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79122202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.363;LDAF=0.0035;AVGPOST=0.9949;RSQ=0.4311;ERATE=0.0009;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79122278 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7650;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79122374 rs112098748 AG A 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5635;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79122430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.804;LDAF=0.0089;AVGPOST=0.9964;RSQ=0.8531;ERATE=0.0004;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79122523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.335;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3583;ERATE=0.0009;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79122586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4337;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79122664 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6497;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79122797 rs71742805 AAG A 40650 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3594;AVGPOST=0.9915;RSQ=0.9858;ERATE=0.0022;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 79122871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79122889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9244;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79122898 . TGGCAC T 248 PASS INDEL;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79122936 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7414;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79123147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1636;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0005;THETA=0.0008;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 79123219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1625;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 79123370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9436;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79123481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9765;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79123485 rs10643513 C CTAA 85921 PASS INDEL;BAVGPOST=0.978;BRSQ=0.964;LDAF=0.5409;AVGPOST=0.9908;RSQ=0.9864;ERATE=0.0004;THETA=0.0002;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 79123583 rs35113712 T TAAG 27451 PASS INDEL;BAVGPOST=0.975;BRSQ=0.961;LDAF=0.5297;AVGPOST=0.9642;RSQ=0.9494;ERATE=0.0075;THETA=0.0003;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 79123584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0153;AVGPOST=0.9993;RSQ=0.9821;ERATE=0.0003;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79123629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9452;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79123674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79123710 . TC T 11955 PASS INDEL;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.3680;AVGPOST=0.9640;RSQ=0.9420;ERATE=0.0049;THETA=0.0008;AC=807;AN=2184 GT:DS:GL:BD 0.36950549 0
1 79123744 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7148;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79123874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9946;AVGPOST=0.9985;RSQ=0.8762;ERATE=0.0004;THETA=0.0006;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 79123906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0048;AVGPOST=0.9976;RSQ=0.7908;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79123988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8851;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79123992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8968;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79124059 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79124108 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4319;AVGPOST=0.9929;RSQ=0.9889;ERATE=0.0011;THETA=0.0005;AC=940;AN=2184 GT:DS:GL:BD 0.43040293 0
1 79124177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8300;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79124199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5411;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79124228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8749;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79124267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4723;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79124491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9859;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79124560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1749;AVGPOST=0.9979;RSQ=0.9937;ERATE=0.0004;THETA=0.0004;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 79124692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9593;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79124802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79124850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8562;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79124911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8101;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79124940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9780;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79125013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0114;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79125088 . C CTGGT 168 PASS INDEL;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79125123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79125248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79125249 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79125263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79125291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0087;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79125299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5918;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79125303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79125304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6113;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79125686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79125758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4583;AVGPOST=0.9901;RSQ=0.9861;ERATE=0.0018;THETA=0.0005;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 79125903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9991;RSQ=0.9574;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79125908 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8653;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79126035 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0074;AVGPOST=0.9969;RSQ=0.8353;ERATE=0.0004;THETA=0.0101;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79126485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7625;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79126577 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79126604 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.7937;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79126749 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7762;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79126838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.928;LDAF=0.0167;AVGPOST=0.9979;RSQ=0.9511;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79126852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7113;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79126956 . TTGGAGA T 16250 PASS INDEL;BAVGPOST=0.924;BRSQ=0.859;LDAF=0.3810;AVGPOST=0.9004;RSQ=0.8418;ERATE=0.0207;THETA=0.0003;AC=839;AN=2184 GT:DS:GL:BD 0.38415751 0
1 79127040 rs72296901 TGGAGAA T 30887 PASS INDEL;BAVGPOST=0.943;BRSQ=0.899;LDAF=0.4165;AVGPOST=0.9760;RSQ=0.9626;ERATE=0.0012;THETA=0.0004;AC=924;AN=2184 GT:DS:GL:BD 0.42307693 0
1 79127041 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79127332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4368;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0006;THETA=0.0002;AC=955;AN=2184 GT:DS:GL:BD 0.43727106 0
1 79127337 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79127357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0245;AVGPOST=0.9985;RSQ=0.9734;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 79127422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9966;AVGPOST=0.9985;RSQ=0.8091;ERATE=0.0003;THETA=0.0006;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 79127465 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0138;AVGPOST=0.9995;RSQ=0.9838;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79127561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79127574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79127634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79127645 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8084;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79127651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7570;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79127745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6704;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79127835 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8354;ERATE=0.0008;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79127921 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.3647;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79127935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0313;AVGPOST=0.9968;RSQ=0.9579;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 79127940 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79127950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9583;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79128059 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9990;RSQ=0.9007;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79128087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0220;AVGPOST=0.9986;RSQ=0.9747;ERATE=0.0004;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79128140 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0214;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79128165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0273;AVGPOST=0.9990;RSQ=0.9849;ERATE=0.0004;THETA=0.0019;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79128201 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79128210 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79128214 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8534;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79128398 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7064;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79128417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9816;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79128421 . CT C 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79128528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79128536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6207;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0006;THETA=0.0001;AC=1356;AN=2184 GT:DS:GL:BD 0.62087911 1
1 79128552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0137;AVGPOST=0.9976;RSQ=0.9250;ERATE=0.0003;THETA=0.0019;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79128590 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0193;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 79128606 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9413;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79128618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79128690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9170;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79128706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79128720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9210;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79128734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79128736 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.1070;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 79129011 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79129042 . CAGG C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79129049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7259;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79129078 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9064;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79129116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79129127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3015;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0006;THETA=0.0002;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 79129322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0103;AVGPOST=0.9994;RSQ=0.9801;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79129399 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3013;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 79129470 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9069;AVGPOST=0.9989;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=1980;AN=2184 GT:DS:GL:BD 0.90659338 1
1 79129497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79129745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7823;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79129818 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79129854 . AG A 1908 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79130024 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5425;AVGPOST=0.9978;RSQ=0.9961;ERATE=0.0008;THETA=0.0002;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 79130048 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0087;AVGPOST=0.9991;RSQ=0.9539;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79130105 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79130147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79130215 . AG A 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79130281 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5094;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0006;THETA=0.0004;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 79130318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0133;AVGPOST=0.9962;RSQ=0.8890;ERATE=0.0004;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79130356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0068;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79130512 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79130637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9495;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=2074;AN=2184 GT:DS:GL:BD 0.94963372 1
1 79130682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8261;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79130691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5901;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79130799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79130813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4041;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0005;THETA=0.0004;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 79130876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0223;AVGPOST=0.9980;RSQ=0.9649;ERATE=0.0003;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79131003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79131004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79131022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1033;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 79131110 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79131131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79131171 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4040;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 79131173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79131182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79131251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79131275 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1319;AVGPOST=0.9987;RSQ=0.9959;ERATE=0.0004;THETA=0.0010;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 79131344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79131345 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5286;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79131357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79131524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79131568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9193;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79131581 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5166;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 79131669 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79131695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0649;AVGPOST=0.9976;RSQ=0.9850;ERATE=0.0003;THETA=0.0004;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 79131828 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1326;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0003;THETA=0.0001;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 79131839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79131854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79131894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79131923 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8635;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79131996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6918;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79132064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79132206 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1036;AVGPOST=0.9979;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 79132433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79132603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4041;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0004;AC=883;AN=2184 GT:DS:GL:BD 0.40430403 0
1 79132639 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1321;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 79132647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79132648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6475;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79132715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79132740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4035;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 79132755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7280;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79132795 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0017;AVGPOST=0.9998;RSQ=0.9418;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79132865 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79132913 . A AC 55 PASS INDEL;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6073;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79133077 . C CA 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.4911;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79133095 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79133198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.804;LDAF=0.0135;AVGPOST=0.9963;RSQ=0.8892;ERATE=0.0004;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79133216 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.949;LDAF=0.1935;AVGPOST=0.9803;RSQ=0.9599;ERATE=0.0017;THETA=0.0010;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 79133270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0105;AVGPOST=0.9983;RSQ=0.9379;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79133281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6316;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79133389 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7523;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79133474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.833;LDAF=0.0253;AVGPOST=0.9890;RSQ=0.8395;ERATE=0.0007;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79133527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.838;LDAF=0.0064;AVGPOST=0.9978;RSQ=0.8692;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79133534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8820;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79133629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8876;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79133637 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5233;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79133653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0072;AVGPOST=0.9978;RSQ=0.8827;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79133694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79133704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79133752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7604;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79133871 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0321;AVGPOST=0.9980;RSQ=0.9780;ERATE=0.0003;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 79133929 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8721;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79133966 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9223;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79134005 . TG T 24 PASS INDEL;BAVGPOST=0.982;BRSQ=0.410;LDAF=0.0270;AVGPOST=0.9714;RSQ=0.6006;ERATE=0.0028;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 79134125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4332;AVGPOST=0.9966;RSQ=0.9964;ERATE=0.0003;THETA=0.0010;AC=948;AN=2184 GT:DS:GL:BD 0.43406594 0
1 79134267 . T TG 1787 PASS INDEL;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0136;AVGPOST=0.9984;RSQ=0.9503;ERATE=0.0003;THETA=0.0049;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79134303 . AT A 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79134425 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79134430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6494;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79134587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7882;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79134618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7564;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79134635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1938;AVGPOST=0.9958;RSQ=0.9908;ERATE=0.0004;THETA=0.0005;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 79134665 . ATCTT A 222 PASS INDEL;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8928;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79134671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9365;ERATE=0.0005;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79134736 . G GT 194 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7316;ERATE=0.0007;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79134808 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0086;AVGPOST=0.9982;RSQ=0.9187;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79134810 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79134812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5043;ERATE=0.0004;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79134825 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8191;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79134958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.771;LDAF=0.0077;AVGPOST=0.9963;RSQ=0.8329;ERATE=0.0005;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79134981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8156;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79135291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79135335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0030;AVGPOST=0.9972;RSQ=0.6411;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79135463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79135472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9482;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79135754 . T TTC 14358 PASS INDEL;BAVGPOST=0.933;BRSQ=0.897;LDAF=0.3775;AVGPOST=0.9075;RSQ=0.8799;ERATE=0.0177;THETA=0.0033;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 79135824 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1753;AVGPOST=0.9960;RSQ=0.9910;ERATE=0.0003;THETA=0.0011;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 79136284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8975;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79136286 . A AGAT 3645 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0131;AVGPOST=0.9977;RSQ=0.9364;ERATE=0.0004;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79136530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7928;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79136604 . G GTCA 116 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79136647 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9285;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79136700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7731;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79136759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8355;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79136789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79136791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79136909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8795;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79136911 . A ACTT 312 PASS INDEL;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8199;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79136950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.9109;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79136952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79137074 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7712;ERATE=0.0003;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79137106 . TAC T 194 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5254;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79137244 . TGTTTG T 61 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9982;RSQ=0.2853;ERATE=0.0005;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79137302 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9809;ERATE=0.0005;THETA=0.0016;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79137378 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8651;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79137437 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79137463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0764;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 79137595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79137640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79137647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79137723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.8201;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79137740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.631;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.7797;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79137813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4627;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79137852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8388;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79137999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0120;AVGPOST=0.9976;RSQ=0.9238;ERATE=0.0003;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79138075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7236;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79138193 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4448;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79138306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0054;AVGPOST=0.9973;RSQ=0.8081;ERATE=0.0007;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79138408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6006;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79138419 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.7185;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79138421 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79138521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7618;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79138543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79139047 . C CT 110 PASS INDEL;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6307;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79139098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79139202 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3980;AVGPOST=0.9946;RSQ=0.9919;ERATE=0.0018;THETA=0.0003;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 79139205 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9001;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79139303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5651;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79139497 . ACTC A 341 PASS INDEL;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0162;AVGPOST=0.9972;RSQ=0.9333;ERATE=0.0004;THETA=0.0025;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79139622 . CCTT C 1145 PASS INDEL;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0168;AVGPOST=0.9977;RSQ=0.9404;ERATE=0.0005;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79139625 . AT A 14352 PASS INDEL;BAVGPOST=0.986;BRSQ=0.968;LDAF=0.2615;AVGPOST=0.9679;RSQ=0.9391;ERATE=0.0066;THETA=0.0005;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 79139635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4557;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79139868 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.830;LDAF=0.0093;AVGPOST=0.9960;RSQ=0.8236;ERATE=0.0004;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79139897 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.975;LDAF=0.3935;AVGPOST=0.9909;RSQ=0.9863;ERATE=0.0010;THETA=0.0003;AC=867;AN=2184 GT:DS:GL:BD 0.39697802 0
1 79140026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79140109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0713;AVGPOST=0.9973;RSQ=0.9865;ERATE=0.0005;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 79140145 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0709;AVGPOST=0.9987;RSQ=0.9922;ERATE=0.0006;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 79140421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8594;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79140501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0164;AVGPOST=0.9990;RSQ=0.9793;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79140510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1439;AVGPOST=0.9957;RSQ=0.9869;ERATE=0.0006;THETA=0.0007;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 79140552 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4084;ERATE=0.0007;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79140577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79140680 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.983;LDAF=0.7190;AVGPOST=0.9897;RSQ=0.9788;ERATE=0.0017;THETA=0.0003;AC=1576;AN=2184 GT:DS:GL:BD 0.72161174 1
1 79140848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79141044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6746;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79141165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0109;AVGPOST=0.9936;RSQ=0.7982;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79141198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0161;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79141390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0579;AVGPOST=0.9992;RSQ=0.9938;ERATE=0.0004;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 79141463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.6844;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79141511 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0160;AVGPOST=0.9998;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79141581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4787;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79141594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79141632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79141658 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79141787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5980;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79141857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79141868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79141884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.736;LDAF=0.0034;AVGPOST=0.9963;RSQ=0.5819;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79141932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8699;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79142010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9887;ERATE=0.0004;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79142446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0141;AVGPOST=0.9960;RSQ=0.8850;ERATE=0.0008;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79142540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1442;AVGPOST=0.9971;RSQ=0.9904;ERATE=0.0004;THETA=0.0002;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 79142615 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.964;LDAF=0.0308;AVGPOST=0.9984;RSQ=0.9812;ERATE=0.0003;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 79142631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.971;LDAF=0.2433;AVGPOST=0.9865;RSQ=0.9734;ERATE=0.0019;THETA=0.0003;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 79142649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79142744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6964;ERATE=0.0003;THETA=0.0029;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79142883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0708;AVGPOST=0.9989;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 79142971 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.6830;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79142977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5868;AVGPOST=0.9942;RSQ=0.9908;ERATE=0.0007;THETA=0.0005;AC=1282;AN=2184 GT:DS:GL:BD 0.58699632 1
1 79142979 . CCAAA C 738 PASS INDEL;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8366;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79143237 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5640;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79143262 . C CG 560 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0263;AVGPOST=0.9986;RSQ=0.9745;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79143340 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0259;AVGPOST=0.9994;RSQ=0.9883;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79143376 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9283;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79143395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0038;AVGPOST=0.9968;RSQ=0.6781;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79143571 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79143579 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2404;AVGPOST=0.9981;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 79143583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.869;LDAF=0.0215;AVGPOST=0.9988;RSQ=0.9749;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79143587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6301;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79143735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0258;AVGPOST=0.9994;RSQ=0.9879;ERATE=0.0003;THETA=0.0006;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79143743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0060;AVGPOST=0.9984;RSQ=0.8808;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79143782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.6024;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79143818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7772;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79143846 . GAA G 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5354;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79143888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7410;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79143914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4593;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79143986 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79144114 . T TC 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7771;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79144146 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4456;AVGPOST=0.9988;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 79144296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79144367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79144378 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9077;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79144397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79144424 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79144472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7362;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79144584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4432;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79144628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9715;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79144848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4435;AVGPOST=0.9951;RSQ=0.9928;ERATE=0.0008;THETA=0.0003;AC=973;AN=2184 GT:DS:GL:BD 0.44551283 0
1 79144936 . C CA 2126 PASS INDEL;BAVGPOST=0.974;BRSQ=0.742;LDAF=0.0689;AVGPOST=0.9452;RSQ=0.6504;ERATE=0.0223;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 79144943 . AG A 704 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9155;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79145054 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8189;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79145086 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.762;LDAF=0.0159;AVGPOST=0.9881;RSQ=0.6863;ERATE=0.0011;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79145257 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0066;AVGPOST=0.9930;RSQ=0.5966;ERATE=0.0007;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79145322 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0259;AVGPOST=0.9994;RSQ=0.9878;ERATE=0.0004;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79145413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7806;AVGPOST=0.9957;RSQ=0.9927;ERATE=0.0005;THETA=0.0002;AC=1705;AN=2184 GT:DS:GL:BD 0.78067768 1
1 79145416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79145440 . C CT 26 PASS INDEL;BAVGPOST=0.990;BRSQ=0.466;LDAF=0.0244;AVGPOST=0.9670;RSQ=0.4586;ERATE=0.0053;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79145516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0084;AVGPOST=0.9950;RSQ=0.7697;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79145541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0080;AVGPOST=0.9974;RSQ=0.8759;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79145547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0178;AVGPOST=0.9943;RSQ=0.8743;ERATE=0.0009;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79145590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0465;AVGPOST=0.9957;RSQ=0.9626;ERATE=0.0005;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 79145861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.3017;ERATE=0.0007;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79145862 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9079;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79145919 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5634;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79146066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5213;AVGPOST=0.9964;RSQ=0.9946;ERATE=0.0005;THETA=0.0004;AC=1141;AN=2184 GT:DS:GL:BD 0.52243590 1
1 79146068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8439;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79146147 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2403;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 79146191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0157;AVGPOST=0.9982;RSQ=0.9589;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79146207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9986;RSQ=0.9818;ERATE=0.0004;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 79146312 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0260;AVGPOST=0.9992;RSQ=0.9861;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79146428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5581;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79146455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5290;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79146673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.5334;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79146760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0065;AVGPOST=0.9971;RSQ=0.8452;ERATE=0.0003;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79146794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7929;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1733;AN=2184 GT:DS:GL:BD 0.79349816 1
1 79146962 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8833;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79147017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.912;LDAF=0.0267;AVGPOST=0.9952;RSQ=0.9356;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 79147062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6974;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79147067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9032;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79147082 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5620;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79147134 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79147333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0258;AVGPOST=0.9997;RSQ=0.9938;ERATE=0.0003;THETA=0.0005;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79147347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79147375 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79147557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79147625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0066;AVGPOST=0.9978;RSQ=0.8715;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79147716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4469;AVGPOST=0.9935;RSQ=0.9897;ERATE=0.0005;THETA=0.0020;AC=979;AN=2184 GT:DS:GL:BD 0.44826007 0
1 79147719 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9082;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79147846 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.722;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7907;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79147857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6384;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79147912 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79147960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6088;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79147967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.3477;ERATE=0.0009;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79148044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.504;LDAF=0.0048;AVGPOST=0.9926;RSQ=0.4580;ERATE=0.0009;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79148053 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0321;AVGPOST=0.9952;RSQ=0.9411;ERATE=0.0011;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 79148179 . ACT A 18 PASS INDEL;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4386;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79148657 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7528;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79148861 rs71799229 AC A 1044 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.8969;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79149007 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.1122;AVGPOST=0.9919;RSQ=0.9722;ERATE=0.0004;THETA=0.0015;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 79149104 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4264;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79149193 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5147;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79149215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79149216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6250;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79149233 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0800;AVGPOST=0.9974;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 79149296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0449;AVGPOST=0.9973;RSQ=0.9745;ERATE=0.0003;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 79149309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0057;AVGPOST=0.9989;RSQ=0.9144;ERATE=0.0005;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79149318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.7739;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79149333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.7229;AVGPOST=0.9918;RSQ=0.9870;ERATE=0.0004;THETA=0.0008;AC=1580;AN=2184 GT:DS:GL:BD 0.72344321 1
1 79149361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79149391 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0269;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0010;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79149471 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.8976;ERATE=0.0005;THETA=0.0039;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79149650 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5459;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79149665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.7921;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79149754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.682;LDAF=0.0049;AVGPOST=0.9976;RSQ=0.7931;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79150033 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.853;LDAF=0.0367;AVGPOST=0.9886;RSQ=0.8821;ERATE=0.0005;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 79150043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5949;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79150142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6667;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79150143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0452;AVGPOST=0.9966;RSQ=0.9694;ERATE=0.0007;THETA=0.0011;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 79150301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0100;AVGPOST=0.9971;RSQ=0.8912;ERATE=0.0004;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79150342 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79150361 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9034;ERATE=0.0003;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79150364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9806;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79150429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7450;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79150568 . TTTTTA T 108 PASS INDEL;BAVGPOST=0.999;BRSQ=0.568;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3686;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79150774 . AT A 196 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8761;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79150808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.789;LDAF=0.0053;AVGPOST=0.9979;RSQ=0.8219;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79150836 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9395;ERATE=0.0004;THETA=0.0045;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79150837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8047;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79150850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6178;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79150851 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9727;ERATE=0.0003;THETA=0.0093;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79150862 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9672;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79151014 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.967;LDAF=0.8623;AVGPOST=0.9888;RSQ=0.9646;ERATE=0.0003;THETA=0.0015;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 79151111 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.392;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79151195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0217;AVGPOST=0.9983;RSQ=0.9664;ERATE=0.0004;THETA=0.0055;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 79151220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1021;AVGPOST=0.9982;RSQ=0.9915;ERATE=0.0005;THETA=0.0013;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 79151281 . C CA 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8108;ERATE=0.0004;THETA=0.0093;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79151360 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79151377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0172;AVGPOST=0.9982;RSQ=0.9590;ERATE=0.0004;THETA=0.0127;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79151431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.967;LDAF=0.1306;AVGPOST=0.9883;RSQ=0.9621;ERATE=0.0037;THETA=0.0005;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 79151448 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79151651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0051;AVGPOST=0.9976;RSQ=0.8316;ERATE=0.0004;THETA=0.0084;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79151740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7934;ERATE=0.0007;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79151769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.935;LDAF=0.0286;AVGPOST=0.9968;RSQ=0.9583;ERATE=0.0005;THETA=0.0054;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 79151772 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0555;AVGPOST=0.9976;RSQ=0.9864;ERATE=0.0003;THETA=0.0123;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 79151796 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0509;AVGPOST=0.9975;RSQ=0.9850;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 79151823 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3818;AVGPOST=0.9960;RSQ=0.9943;ERATE=0.0004;THETA=0.0048;AC=834;AN=2184 GT:DS:GL:BD 0.38186812 0
1 79151827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0028;AVGPOST=0.9965;RSQ=0.6159;ERATE=0.0003;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79151846 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2476;AVGPOST=0.9974;RSQ=0.9960;ERATE=0.0005;THETA=0.0005;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 79151886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3697;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0003;THETA=0.0011;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 79151910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79151973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2242;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0015;THETA=0.0007;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 79151978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1147;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0059;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 79151988 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1924;AVGPOST=0.9985;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 79152058 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79152059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9363;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79152164 rs71702583 ACAT A 13968 PASS INDEL;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0765;AVGPOST=0.9982;RSQ=0.9894;ERATE=0.0005;THETA=0.0003;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 79152169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2277;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 79152198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1490;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 79152233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79152267 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 79152293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8430;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79152359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79152368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79152427 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9453;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79152436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9328;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79152453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79152619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0091;AVGPOST=0.9994;RSQ=0.9671;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79152640 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79152662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0350;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0003;THETA=0.0008;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 79152687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8313;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79152729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0349;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 79152759 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0348;AVGPOST=1.0000;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 79152777 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79152975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.0348;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0003;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 79153047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79153123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79153174 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7704;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79153333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0781;AVGPOST=0.9966;RSQ=0.9800;ERATE=0.0005;THETA=0.0009;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 79153340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.7042;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79153365 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5060;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79153479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.8004;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1747;AN=2184 GT:DS:GL:BD 0.79990840 1
1 79153518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79153724 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5080;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79153867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0053;AVGPOST=0.9985;RSQ=0.8761;ERATE=0.0004;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79153973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1109;AVGPOST=0.9974;RSQ=0.9909;ERATE=0.0004;THETA=0.0010;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 79154091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.709;LDAF=0.0036;AVGPOST=0.9966;RSQ=0.6746;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79154183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0576;AVGPOST=0.9982;RSQ=0.9867;ERATE=0.0005;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 79154199 . CATTT C 128 PASS INDEL;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0048;AVGPOST=0.9973;RSQ=0.7499;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79154281 . GC G 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5055;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79154558 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5713;AVGPOST=0.9920;RSQ=0.9879;ERATE=0.0006;THETA=0.0011;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 79154571 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9872;ERATE=0.0003;THETA=0.0073;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79154636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4660;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79154690 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79154720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79154721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79154723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9854;ERATE=0.0002;THETA=0.0067;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79154794 rs11306359 C CT 5911 PASS INDEL;BAVGPOST=0.916;BRSQ=0.701;LDAF=0.1428;AVGPOST=0.9195;RSQ=0.7680;ERATE=0.0063;THETA=0.0008;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 79155043 . C CG 269 PASS INDEL;BAVGPOST=0.939;BRSQ=0.589;LDAF=0.0537;AVGPOST=0.9517;RSQ=0.6590;ERATE=0.0020;THETA=0.0106;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 79155046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9078;ERATE=0.0003;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79155180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0076;AVGPOST=0.9989;RSQ=0.9462;ERATE=0.0002;THETA=0.0044;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79155199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79155207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.972;LDAF=0.3385;AVGPOST=0.9870;RSQ=0.9803;ERATE=0.0007;THETA=0.0057;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 79155429 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0407;AVGPOST=0.9943;RSQ=0.9452;ERATE=0.0006;THETA=0.0037;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 79155484 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0044;AVGPOST=0.9958;RSQ=0.5902;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79155543 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0330;AVGPOST=0.9977;RSQ=0.9675;ERATE=0.0004;THETA=0.0004;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 79155742 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2387;AVGPOST=0.9927;RSQ=0.9850;ERATE=0.0005;THETA=0.0004;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 79155752 rs59531666 AGCT A 1180 PASS INDEL;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0226;AVGPOST=0.9864;RSQ=0.7948;ERATE=0.0009;THETA=0.0026;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 79155938 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9897;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79155981 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79156164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2614;AVGPOST=0.9951;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 79156255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0071;AVGPOST=0.9991;RSQ=0.9421;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79156260 . GT G 459 PASS INDEL;BAVGPOST=0.997;BRSQ=0.847;LDAF=0.0071;AVGPOST=0.9954;RSQ=0.7301;ERATE=0.0005;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79156490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0138;AVGPOST=0.9975;RSQ=0.9296;ERATE=0.0004;THETA=0.0027;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79156559 . AG A 125 PASS INDEL;BAVGPOST=0.998;BRSQ=0.614;LDAF=0.0060;AVGPOST=0.9934;RSQ=0.5323;ERATE=0.0008;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79156581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79156589 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.981;LDAF=0.1199;AVGPOST=0.9958;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 79156598 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2664;AVGPOST=0.9899;RSQ=0.9806;ERATE=0.0005;THETA=0.0007;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 79156615 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.973;LDAF=0.2562;AVGPOST=0.9891;RSQ=0.9770;ERATE=0.0011;THETA=0.0010;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 79156624 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.894;LDAF=0.0073;AVGPOST=0.9985;RSQ=0.9213;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79156682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.2690;AVGPOST=0.9953;RSQ=0.9905;ERATE=0.0006;THETA=0.0011;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 79156746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.787;LDAF=0.0252;AVGPOST=0.9905;RSQ=0.8498;ERATE=0.0006;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 79156779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0696;AVGPOST=0.9976;RSQ=0.9837;ERATE=0.0005;THETA=0.0022;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 79156846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.4783;ERATE=0.0005;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79156985 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4298;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79156986 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.8176;AVGPOST=0.9894;RSQ=0.9730;ERATE=0.0005;THETA=0.0007;AC=1786;AN=2184 GT:DS:GL:BD 0.81776559 1
1 79157008 . A AG 581 PASS INDEL;BAVGPOST=0.978;BRSQ=0.865;LDAF=0.0899;AVGPOST=0.9573;RSQ=0.8082;ERATE=0.0017;THETA=0.0013;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 79157023 rs112962229 G GC 6994 PASS INDEL;BAVGPOST=0.982;BRSQ=0.904;LDAF=0.0753;AVGPOST=0.9914;RSQ=0.9556;ERATE=0.0003;THETA=0.0041;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 79157025 . G GC 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0022;AVGPOST=0.9964;RSQ=0.4137;ERATE=0.0004;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79157035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6259;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79157059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1086;AVGPOST=0.9937;RSQ=0.9791;ERATE=0.0004;THETA=0.0021;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 79157103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0834;AVGPOST=0.9956;RSQ=0.9777;ERATE=0.0004;THETA=0.0009;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 79157119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.576;LDAF=0.0030;AVGPOST=0.9960;RSQ=0.5218;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79157129 . CA C 171 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7283;ERATE=0.0003;THETA=0.0165;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79157238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7754;ERATE=0.0012;THETA=0.0069;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79157246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9664;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79157310 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9381;ERATE=0.0003;THETA=0.0069;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79157368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9010;ERATE=0.0003;THETA=0.0099;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79157681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7624;ERATE=0.0002;THETA=0.0130;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79157686 . AC A 14690 PASS INDEL;BAVGPOST=0.951;BRSQ=0.919;LDAF=0.5653;AVGPOST=0.9229;RSQ=0.8975;ERATE=0.0147;THETA=0.0024;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 79157858 rs67655073 CA C 65713 PASS INDEL;BAVGPOST=0.981;BRSQ=0.969;LDAF=0.6001;AVGPOST=0.9830;RSQ=0.9773;ERATE=0.0005;THETA=0.0013;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 79157859 . AC A 16064 PASS INDEL;BAVGPOST=0.957;BRSQ=0.928;LDAF=0.5638;AVGPOST=0.9287;RSQ=0.9071;ERATE=0.0124;THETA=0.0044;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 79157861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9776;ERATE=0.0002;THETA=0.0057;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79157965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0092;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79157994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6194;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0007;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 79158054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7334;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79158122 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0002;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79158183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1426;AVGPOST=0.9958;RSQ=0.9887;ERATE=0.0004;THETA=0.0006;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 79158195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9443;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79158265 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0718;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0002;THETA=0.0002;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 79158272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.710;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7699;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79158437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7538;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79158653 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0161;AVGPOST=0.9989;RSQ=0.9740;ERATE=0.0003;THETA=0.0039;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79159078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79159100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.6094;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79159187 . TTG T 102 PASS INDEL;BAVGPOST=0.989;BRSQ=0.631;LDAF=0.0243;AVGPOST=0.9738;RSQ=0.5641;ERATE=0.0085;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79159259 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79159287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0724;AVGPOST=0.9988;RSQ=0.9924;ERATE=0.0005;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 79159439 . C CG 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0030;AVGPOST=0.9968;RSQ=0.5957;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79159462 . C CT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9954;RSQ=0.7835;ERATE=0.0006;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79159467 . T TC 30 PASS INDEL;BAVGPOST=0.863;BRSQ=0.054;LDAF=0.1980;AVGPOST=0.7375;RSQ=0.3367;ERATE=0.0159;THETA=0.0005;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 79159482 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.758;LDAF=0.0084;AVGPOST=0.9953;RSQ=0.7942;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79159494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9985;RSQ=0.9197;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79159633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0060;AVGPOST=0.9981;RSQ=0.8690;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79159723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2614;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 79159750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.586;LDAF=0.0083;AVGPOST=0.9900;RSQ=0.5217;ERATE=0.0009;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79159880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8779;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79159902 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79159973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0022;AVGPOST=0.9970;RSQ=0.4814;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79160021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5736;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79160039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.5888;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79160045 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0451;AVGPOST=0.9973;RSQ=0.9798;ERATE=0.0005;THETA=0.0003;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 79160046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0055;AVGPOST=0.9978;RSQ=0.8253;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79160163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9420;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79160241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2605;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0003;THETA=0.0007;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 79160344 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2606;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 79160363 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8204;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79160425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7458;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79160668 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.8930;AVGPOST=0.9843;RSQ=0.9380;ERATE=0.0012;THETA=0.0004;AC=1955;AN=2184 GT:DS:GL:BD 0.89514655 1
1 79160985 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5152;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79161364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0063;AVGPOST=0.9956;RSQ=0.7399;ERATE=0.0005;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79161372 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4727;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79161485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8347;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79161511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2642;AVGPOST=0.9952;RSQ=0.9915;ERATE=0.0009;THETA=0.0004;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 79161540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8347;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79161560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9230;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79161590 rs72305291 GCCTGAGTGTCT G 71384 PASS INDEL;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.5062;AVGPOST=0.9822;RSQ=0.9720;ERATE=0.0042;THETA=0.0004;AC=1114;AN=2184 GT:DS:GL:BD 0.51007324 1
1 79161612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.5956;ERATE=0.0006;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79161665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79161796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79161800 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6322;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79161831 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9443;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79161908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0185;AVGPOST=0.9961;RSQ=0.9221;ERATE=0.0009;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79161914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79161963 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2620;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0005;THETA=0.0004;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 79162036 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0186;AVGPOST=0.9954;RSQ=0.9013;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79162150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79162180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6953;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79162194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.713;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79162202 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79162261 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4449;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79162290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2609;AVGPOST=0.9969;RSQ=0.9944;ERATE=0.0005;THETA=0.0005;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 79162518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7399;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79162553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.874;LDAF=0.0390;AVGPOST=0.9931;RSQ=0.9372;ERATE=0.0004;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 79162579 . G GA 75 PASS INDEL;BAVGPOST=0.988;BRSQ=0.541;LDAF=0.0266;AVGPOST=0.9695;RSQ=0.5331;ERATE=0.0080;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79162742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79162814 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79162818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0044;AVGPOST=0.9967;RSQ=0.7236;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79162997 . CTGT C 961 PASS INDEL;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8060;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79163079 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.804;LDAF=0.0070;AVGPOST=0.9971;RSQ=0.8379;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79163081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4863;AVGPOST=0.9968;RSQ=0.9953;ERATE=0.0006;THETA=0.0007;AC=1062;AN=2184 GT:DS:GL:BD 0.48626372 0
1 79163126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.674;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.5799;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79163344 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4640;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79163419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0343;AVGPOST=0.9977;RSQ=0.9736;ERATE=0.0003;THETA=0.0001;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 79163440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6244;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79163480 rs34242319 A AT 44188 PASS INDEL;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5824;AVGPOST=0.9834;RSQ=0.9754;ERATE=0.0026;THETA=0.0005;AC=1277;AN=2184 GT:DS:GL:BD 0.58470696 1
1 79163575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6359;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79163590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79163874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6942;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79163880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2276;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 79163891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6944;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79163892 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9211;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79163916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6564;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79163947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79164003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0590;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 79164106 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79164165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4227;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79164235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9853;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79164360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9994;RSQ=0.9886;ERATE=0.0003;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79164403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0172;AVGPOST=0.9976;RSQ=0.9430;ERATE=0.0004;THETA=0.0001;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79164408 . CT C 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4934;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79164421 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2769;AVGPOST=0.9970;RSQ=0.9951;ERATE=0.0009;THETA=0.0003;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 79164465 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9996;RSQ=0.9921;ERATE=0.0002;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79164774 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79164866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79165005 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6537;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79165075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79165235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0106;AVGPOST=0.9993;RSQ=0.9706;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79165246 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8840;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79165250 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2333;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0001;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 79165301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8392;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79165419 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5393;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79165420 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0473;AVGPOST=0.9994;RSQ=0.9943;ERATE=0.0003;THETA=0.0005;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 79165426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7592;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79165517 rs71823513 GA G 2818 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0234;AVGPOST=0.9987;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79165592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0106;AVGPOST=0.9989;RSQ=0.9596;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79165669 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79165745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5548;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79165780 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.800;LDAF=0.0046;AVGPOST=0.9982;RSQ=0.8675;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79165801 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2198;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=479;AN=2184 GT:DS:GL:BD 0.21932234 0
1 79165940 . GGA G 365 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9291;ERATE=0.0002;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79166091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79166128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0229;AVGPOST=0.9997;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79166139 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79166277 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79166347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79166459 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6331;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79166504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6109;ERATE=0.0007;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79166508 rs111841874 TAACA T 5322 PASS INDEL;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0471;AVGPOST=0.9964;RSQ=0.9680;ERATE=0.0007;THETA=0.0004;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 79166541 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5175;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79166618 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0002;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79166648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.897;LDAF=0.0518;AVGPOST=0.9869;RSQ=0.9025;ERATE=0.0003;THETA=0.0035;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 79166672 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1402;AVGPOST=0.9985;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 79166726 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1943;AVGPOST=0.9966;RSQ=0.9906;ERATE=0.0003;THETA=0.0007;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 79166767 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5794;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79166784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6453;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79166910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0002;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79166917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8054;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79166968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2333;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 79166979 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7615;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79166989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0077;AVGPOST=0.9980;RSQ=0.8952;ERATE=0.0003;THETA=0.0001;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79167012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6955;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79167314 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1604;AVGPOST=0.9985;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 79167370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.7012;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79167431 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9615;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79167527 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7010;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79167950 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9828;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79167981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0076;AVGPOST=0.9991;RSQ=0.9492;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79168072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0266;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0002;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 79168122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2689;AVGPOST=0.9977;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 79168182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.9958;AVGPOST=0.9989;RSQ=0.8862;ERATE=0.0004;THETA=0.0005;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 79168320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.623;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3727;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79168321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9133;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79168370 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1226;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 79168431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.935;LDAF=0.0139;AVGPOST=0.9986;RSQ=0.9597;ERATE=0.0006;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79168540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6936;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79168592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0174;AVGPOST=0.9982;RSQ=0.9548;ERATE=0.0004;THETA=0.0046;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79168601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9918;AVGPOST=0.9992;RSQ=0.9597;ERATE=0.0003;THETA=0.0006;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 79168659 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7778;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79168718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.681;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7666;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79168778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8764;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79168910 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9994;RSQ=0.9640;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79168964 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2464;AVGPOST=0.9953;RSQ=0.9889;ERATE=0.0005;THETA=0.0004;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 79168996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9331;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79169070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79169085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.6926;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79169246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.706;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6250;ERATE=0.0005;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79169253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.675;LDAF=0.0032;AVGPOST=0.9964;RSQ=0.5428;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79169383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.9855;AVGPOST=0.9957;RSQ=0.8876;ERATE=0.0004;THETA=0.0002;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 79169430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0050;AVGPOST=0.9976;RSQ=0.8019;ERATE=0.0006;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79169438 . G GTC 5142 PASS INDEL;BAVGPOST=0.972;BRSQ=0.895;LDAF=0.1403;AVGPOST=0.9741;RSQ=0.9224;ERATE=0.0016;THETA=0.0005;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 79169544 . T TC 5424 PASS INDEL;BAVGPOST=0.974;BRSQ=0.903;LDAF=0.1379;AVGPOST=0.9744;RSQ=0.9244;ERATE=0.0017;THETA=0.0013;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 79169555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.911;LDAF=0.1224;AVGPOST=0.9827;RSQ=0.9423;ERATE=0.0007;THETA=0.0008;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 79169556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.914;LDAF=0.0934;AVGPOST=0.9781;RSQ=0.9059;ERATE=0.0013;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 79169558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.1070;AVGPOST=0.9906;RSQ=0.9625;ERATE=0.0008;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 79169594 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0067;AVGPOST=0.9976;RSQ=0.8521;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79169630 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2034;AVGPOST=0.9792;RSQ=0.9526;ERATE=0.0012;THETA=0.0009;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 79169631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0030;AVGPOST=0.9959;RSQ=0.4657;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79169648 . GC G 1332 PASS INDEL;BAVGPOST=0.984;BRSQ=0.950;LDAF=0.1726;AVGPOST=0.9888;RSQ=0.9708;ERATE=0.0005;THETA=0.0009;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 79169761 . CA C 14289 PASS INDEL;BAVGPOST=0.996;BRSQ=0.989;LDAF=0.1727;AVGPOST=0.9895;RSQ=0.9731;ERATE=0.0003;THETA=0.0002;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 79169763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.2449;AVGPOST=0.9958;RSQ=0.9905;ERATE=0.0006;THETA=0.0010;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 79169790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0082;AVGPOST=0.9961;RSQ=0.8214;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79169797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79169861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9150;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79169973 . T TTTTTTCC 1351 PASS INDEL;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0048;AVGPOST=0.9966;RSQ=0.7033;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79169979 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79170181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6596;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79170315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.6067;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79170349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0238;AVGPOST=0.9964;RSQ=0.9429;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 79170360 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0113;AVGPOST=0.9962;RSQ=0.8672;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79170392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.590;LDAF=0.0061;AVGPOST=0.9932;RSQ=0.5256;ERATE=0.0005;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79170426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.947;LDAF=0.3000;AVGPOST=0.9705;RSQ=0.9459;ERATE=0.0022;THETA=0.0005;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 79170482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9327;ERATE=0.0003;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79170585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0941;AVGPOST=0.9991;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 79170635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8455;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79170937 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79170962 . CCA C 283 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6776;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79171012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9319;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79171154 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0227;AVGPOST=0.9995;RSQ=0.9908;ERATE=0.0003;THETA=0.0027;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79171183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79171236 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79171374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6913;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79171483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0030;AVGPOST=0.9976;RSQ=0.6715;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79171500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79171501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5918;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79171592 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9205;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79171601 . GA G 107 PASS INDEL;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0029;AVGPOST=0.9970;RSQ=0.5707;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79171635 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9919;AVGPOST=0.9993;RSQ=0.9641;ERATE=0.0003;THETA=0.0012;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 79171774 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6743;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79171855 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79171911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0151;AVGPOST=0.9990;RSQ=0.9779;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79171960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7036;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79171981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8885;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79171999 . CAG C 109 PASS INDEL;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0032;AVGPOST=0.9975;RSQ=0.6791;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79172004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0847;AVGPOST=0.9977;RSQ=0.9877;ERATE=0.0004;THETA=0.0003;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 79172072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3038;AVGPOST=0.9948;RSQ=0.9898;ERATE=0.0008;THETA=0.0006;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 79172117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79172128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.7107;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79172170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79172192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79172236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79172313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8857;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79172405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0078;AVGPOST=0.9976;RSQ=0.8763;ERATE=0.0005;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79172412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79172612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9497;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79172779 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0897;AVGPOST=0.9985;RSQ=0.9940;ERATE=0.0003;THETA=0.0009;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 79172837 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0224;AVGPOST=1.0000;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 79172849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0923;AVGPOST=0.9986;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 79172860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79172872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6796;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79172888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4845;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79173059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6237;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79173087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6791;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79173131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9084;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=1984;AN=2184 GT:DS:GL:BD 0.90842491 1
1 79173138 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6268;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79173198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79173324 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0142;AVGPOST=0.9965;RSQ=0.9043;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79173342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5527;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79173345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79173369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.7294;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79173425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79173670 rs112571224 C CT 35 PASS INDEL;BAVGPOST=0.988;BRSQ=0.459;LDAF=0.0228;AVGPOST=0.9699;RSQ=0.4731;ERATE=0.0083;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79173798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0127;AVGPOST=0.9992;RSQ=0.9719;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79173858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0028;AVGPOST=0.9969;RSQ=0.5896;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79173867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8362;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79173888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1528;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0003;THETA=0.0007;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 79174050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.5446;AVGPOST=0.9969;RSQ=0.9957;ERATE=0.0004;THETA=0.0007;AC=1189;AN=2184 GT:DS:GL:BD 0.54441392 1
1 79174059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5142;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79174149 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0163;AVGPOST=0.9987;RSQ=0.9644;ERATE=0.0004;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79174256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0272;AVGPOST=0.9995;RSQ=0.9934;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79174562 rs56047444 AATATATAATATATAAT A 6133 PASS INDEL;BAVGPOST=0.697;BRSQ=0.488;LDAF=0.5232;AVGPOST=0.7203;RSQ=0.5796;ERATE=0.0231;THETA=0.0015;AC=1192;AN=2184 GT:DS:GL:BD 0.54578757 1
1 79174650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.935;LDAF=0.0981;AVGPOST=0.9818;RSQ=0.9156;ERATE=0.0016;THETA=0.0011;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 79174658 rs56047444 AAT A 592 PASS INDEL;BAVGPOST=0.836;BRSQ=0.113;LDAF=0.2169;AVGPOST=0.7082;RSQ=0.3040;ERATE=0.0248;THETA=0.0007;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 79174664 . TAATA T 2335 PASS INDEL;BAVGPOST=0.594;BRSQ=0.193;LDAF=0.3013;AVGPOST=0.6753;RSQ=0.3569;ERATE=0.0194;THETA=0.0005;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 79174695 . AATATATATAATATATT A 11217 PASS INDEL;BAVGPOST=0.668;BRSQ=0.062;LDAF=0.7229;AVGPOST=0.6986;RSQ=0.3662;ERATE=0.0266;THETA=0.0006;AC=1741;AN=2184 GT:DS:GL:BD 0.79716116 1
1 79174696 rs67651150 T TA 1165 PASS INDEL;BAVGPOST=0.602;BRSQ=0.066;LDAF=0.3005;AVGPOST=0.6626;RSQ=0.3192;ERATE=0.0234;THETA=0.0007;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 79174700 . A AAT 440 PASS INDEL;BAVGPOST=0.611;BRSQ=0.046;LDAF=0.2654;AVGPOST=0.7456;RSQ=0.4497;ERATE=0.0148;THETA=0.0006;AC=414;AN=2184 GT:DS:GL:BD 0.18956044 0
1 79174705 rs71649817 A AAT 201 PASS INDEL;BAVGPOST=0.761;BRSQ=0.052;LDAF=0.1710;AVGPOST=0.8331;RSQ=0.5357;ERATE=0.0051;THETA=0.0002;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 79174717 . AATATATAT A 647 PASS INDEL;BAVGPOST=0.789;BRSQ=0.078;LDAF=0.1508;AVGPOST=0.8381;RSQ=0.4898;ERATE=0.0072;THETA=0.0006;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 79174722 rs66699270 ATAT A 339 PASS INDEL;BAVGPOST=0.788;BRSQ=0.074;LDAF=0.1231;AVGPOST=0.9019;RSQ=0.6583;ERATE=0.0029;THETA=0.0008;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 79174727 . A AAT 45 PASS INDEL;BAVGPOST=0.934;BRSQ=0.014;LDAF=0.0151;AVGPOST=0.9834;RSQ=0.5248;ERATE=0.0011;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79174741 rs67175977 AT A 41 PASS INDEL;BAVGPOST=0.851;BRSQ=0.020;LDAF=0.1117;AVGPOST=0.8319;RSQ=0.3514;ERATE=0.0063;THETA=0.0026;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 79174809 rs67175977 T TTATA 2056 PASS INDEL;BAVGPOST=0.401;BRSQ=0.039;LDAF=0.5439;AVGPOST=0.6312;RSQ=0.3511;ERATE=0.0422;THETA=0.0006;AC=1216;AN=2184 GT:DS:GL:BD 0.55677658 1
1 79174810 . TTA T 255 PASS INDEL;BAVGPOST=0.634;BRSQ=0.035;LDAF=0.2447;AVGPOST=0.6709;RSQ=0.2652;ERATE=0.0211;THETA=0.0002;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 79174817 . T TA 147 PASS INDEL;BAVGPOST=0.789;BRSQ=0.043;LDAF=0.2256;AVGPOST=0.6944;RSQ=0.2662;ERATE=0.0212;THETA=0.0008;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 79174824 . TAA T 373 PASS INDEL;BAVGPOST=0.724;BRSQ=0.057;LDAF=0.2015;AVGPOST=0.8148;RSQ=0.5110;ERATE=0.0123;THETA=0.0008;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 79174836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.357;LDAF=0.0046;AVGPOST=0.9935;RSQ=0.4051;ERATE=0.0010;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79174955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.831;LDAF=0.0640;AVGPOST=0.9886;RSQ=0.9259;ERATE=0.0008;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 79175022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.690;LDAF=0.9560;AVGPOST=0.9607;RSQ=0.6218;ERATE=0.0044;THETA=0.0004;AC=2117;AN=2184 GT:DS:GL:BD 0.96932232 1
1 79175024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0676;AVGPOST=0.9988;RSQ=0.9923;ERATE=0.0003;THETA=0.0007;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 79175207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79175218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79175233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79175281 . T TTC 23511 PASS INDEL;BAVGPOST=0.983;BRSQ=0.974;LDAF=0.5492;AVGPOST=0.9321;RSQ=0.9127;ERATE=0.0109;THETA=0.0008;AC=1208;AN=2184 GT:DS:GL:BD 0.55311358 1
1 79175322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0484;AVGPOST=0.9991;RSQ=0.9925;ERATE=0.0003;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 79175386 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.912;BRSQ=0.710;LDAF=0.1440;AVGPOST=0.9733;RSQ=0.9236;ERATE=0.0007;THETA=0.0010;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 79175449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.832;LDAF=0.0300;AVGPOST=0.9934;RSQ=0.9202;ERATE=0.0004;THETA=0.0006;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 79175456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0030;AVGPOST=0.9981;RSQ=0.7608;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79175465 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.4992;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79175781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.586;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4956;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79175949 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0492;AVGPOST=0.9979;RSQ=0.9867;ERATE=0.0003;THETA=0.0004;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 79176048 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8481;ERATE=0.0004;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79176254 rs71792541 C CT 2420 PASS INDEL;BAVGPOST=0.769;BRSQ=0.071;LDAF=0.8779;AVGPOST=0.8764;RSQ=0.5813;ERATE=0.0023;THETA=0.0010;AC=1924;AN=2184 GT:DS:GL:BD 0.88095236 1
1 79176276 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8736;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79176565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8586;ERATE=0.0004;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79176566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8789;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79176748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79176902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0483;AVGPOST=0.9992;RSQ=0.9946;ERATE=0.0003;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 79176963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0268;AVGPOST=0.9993;RSQ=0.9926;ERATE=0.0003;THETA=0.0007;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79177307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79177406 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9617;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79177486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79177505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79177514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79177598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79177619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79177688 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79177806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7665;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=1673;AN=2184 GT:DS:GL:BD 0.76602566 1
1 79177840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79177942 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 79177980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79178054 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79178111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8144;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0010;AC=1778;AN=2184 GT:DS:GL:BD 0.81410259 1
1 79178150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79178155 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0768;AVGPOST=1.0000;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 79178177 rs111329537 GA G 5841 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0635;AVGPOST=0.9979;RSQ=0.9866;ERATE=0.0005;THETA=0.0007;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 79178295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9569;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79178322 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79178339 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0218;AVGPOST=0.9992;RSQ=0.9830;ERATE=0.0003;THETA=0.0009;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79178439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79178453 . CAT C 466 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79178511 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79178555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79178607 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9988;RSQ=0.9699;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79178655 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8998;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79178841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3031;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 79178876 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5694;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79179132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3028;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 79179189 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3130;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 79179444 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9669;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79179445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5449;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79179450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79179464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2307;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0005;THETA=0.0006;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 79179503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.7344;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79179554 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2825;AVGPOST=0.9973;RSQ=0.9950;ERATE=0.0008;THETA=0.0005;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 79179581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6948;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79179587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1511;AVGPOST=0.9958;RSQ=0.9856;ERATE=0.0005;THETA=0.0009;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 79179649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79179695 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79179789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8578;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79180057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.2308;AVGPOST=0.9962;RSQ=0.9912;ERATE=0.0008;THETA=0.0011;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 79180185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.675;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.6056;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79180190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4645;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79180314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5644;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79180325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3127;AVGPOST=0.9947;RSQ=0.9906;ERATE=0.0009;THETA=0.0004;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 79180326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8597;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79180513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9771;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79180514 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3030;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0006;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 79180652 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79180764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79180844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79180901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79180904 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79181012 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79181076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79181103 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79181163 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79181235 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8187;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79181362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9662;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79181407 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3026;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0007;THETA=0.0003;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 79181662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1531;AVGPOST=0.9978;RSQ=0.9921;ERATE=0.0005;THETA=0.0005;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 79181732 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0535;AVGPOST=0.9983;RSQ=0.9861;ERATE=0.0006;THETA=0.0006;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 79181751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2305;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0005;THETA=0.0007;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 79181992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79182224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0076;AVGPOST=0.9990;RSQ=0.9395;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79182472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0075;AVGPOST=0.9991;RSQ=0.9456;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79182473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3025;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 79182487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0069;AVGPOST=0.9966;RSQ=0.8107;ERATE=0.0007;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79182552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0020;AVGPOST=0.9980;RSQ=0.6204;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79182583 rs34092748 C CT 2747 PASS INDEL;BAVGPOST=0.867;BRSQ=0.593;LDAF=0.2380;AVGPOST=0.8087;RSQ=0.5613;ERATE=0.0345;THETA=0.0006;AC=436;AN=2184 GT:DS:GL:BD 0.19963370 0
1 79182629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9230;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79182681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0029;AVGPOST=0.9957;RSQ=0.3957;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79182736 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8005;ERATE=0.0006;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79182757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5678;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79182793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8220;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79182884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.841;LDAF=0.0087;AVGPOST=0.9977;RSQ=0.9008;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79182996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.950;LDAF=0.0647;AVGPOST=0.9911;RSQ=0.9459;ERATE=0.0004;THETA=0.0003;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 79183079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0536;AVGPOST=0.9981;RSQ=0.9880;ERATE=0.0003;THETA=0.0002;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 79183116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7701;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79183156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2303;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 79183241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9852;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79183268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9437;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79183298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0034;AVGPOST=0.9990;RSQ=0.8873;ERATE=0.0012;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79183330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79183431 rs36113027 ACT A 24815 PASS INDEL;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3024;AVGPOST=0.9884;RSQ=0.9812;ERATE=0.0024;THETA=0.0002;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 79183561 . T TA 108 PASS INDEL;BAVGPOST=0.995;BRSQ=0.562;LDAF=0.0053;AVGPOST=0.9941;RSQ=0.5715;ERATE=0.0012;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79183574 . A AT 168 PASS INDEL;BAVGPOST=0.984;BRSQ=0.512;LDAF=0.0284;AVGPOST=0.9625;RSQ=0.4478;ERATE=0.0066;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79183583 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.975;LDAF=0.2955;AVGPOST=0.9956;RSQ=0.9916;ERATE=0.0007;THETA=0.0003;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 79183664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.952;LDAF=0.2242;AVGPOST=0.9914;RSQ=0.9812;ERATE=0.0007;THETA=0.0007;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 79183775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79183914 . ATGT A 441 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.8211;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79184233 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.703;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8055;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79184301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79184412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6771;AVGPOST=0.9983;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=1479;AN=2184 GT:DS:GL:BD 0.67719781 1
1 79184685 rs56317656 G GT 13261 PASS INDEL;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.1467;AVGPOST=0.9938;RSQ=0.9824;ERATE=0.0008;THETA=0.0005;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 79184701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79185048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79185061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79185124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0002;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79185200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79185242 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9268;ERATE=0.0008;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79185594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7152;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79185597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 79185619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79185650 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79185714 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79185980 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79185995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9468;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79186248 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79186272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6769;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=1479;AN=2184 GT:DS:GL:BD 0.67719781 1
1 79186486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79186557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7090;AVGPOST=0.9991;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=1549;AN=2184 GT:DS:GL:BD 0.70924908 1
1 79186558 . CTTTG C 95 PASS INDEL;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.6280;ERATE=0.0008;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79186603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8305;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79186776 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9216;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79186781 . CTT C 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5400;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79186872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1450;AVGPOST=0.9985;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 79187034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79187043 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79187180 rs61387344 T TC 12795 PASS INDEL;BAVGPOST=0.967;BRSQ=0.937;LDAF=0.4945;AVGPOST=0.8934;RSQ=0.8419;ERATE=0.0189;THETA=0.0004;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 79187232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79187388 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6771;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=1479;AN=2184 GT:DS:GL:BD 0.67719781 1
1 79187403 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79187408 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79187410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79187533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79187662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79187856 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6770;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=1479;AN=2184 GT:DS:GL:BD 0.67719781 1
1 79187897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9413;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79187992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79188033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79188104 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79188143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79188205 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0284;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79188504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9761;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79188509 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0079;AVGPOST=0.9969;RSQ=0.8432;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79188669 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79188702 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5673;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0004;THETA=0.0009;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 79188728 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0303;AVGPOST=0.9991;RSQ=0.9864;ERATE=0.0007;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 79188925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.769;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79188932 . CT C 177 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8270;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79189118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.6049;AVGPOST=0.9762;RSQ=0.9654;ERATE=0.0093;THETA=0.0006;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 79189149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.5849;AVGPOST=0.9911;RSQ=0.9875;ERATE=0.0004;THETA=0.0003;AC=1277;AN=2184 GT:DS:GL:BD 0.58470696 1
1 79189284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.5828;AVGPOST=0.9908;RSQ=0.9872;ERATE=0.0005;THETA=0.0061;AC=1271;AN=2184 GT:DS:GL:BD 0.58195972 1
1 79189295 . TCTA T 310 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9381;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79189324 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.894;BRSQ=0.828;LDAF=0.4540;AVGPOST=0.8943;RSQ=0.8562;ERATE=0.0234;THETA=0.0004;AC=1034;AN=2184 GT:DS:GL:BD 0.47344321 0
1 79189481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0100;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79189569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5668;AVGPOST=0.9979;RSQ=0.9975;ERATE=0.0004;THETA=0.0040;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 79189678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5412;ERATE=0.0004;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79189941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.892;LDAF=0.1336;AVGPOST=0.9674;RSQ=0.9038;ERATE=0.0066;THETA=0.0016;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 79189942 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5665;AVGPOST=0.9976;RSQ=0.9969;ERATE=0.0005;THETA=0.0005;AC=1240;AN=2184 GT:DS:GL:BD 0.56776559 1
1 79189965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9709;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79189987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5677;AVGPOST=0.9894;RSQ=0.9864;ERATE=0.0035;THETA=0.0010;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 79190003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0170;AVGPOST=0.9974;RSQ=0.9439;ERATE=0.0005;THETA=0.0031;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79190299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0020;AVGPOST=0.9971;RSQ=0.5109;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79190303 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5263;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79190448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79190571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9089;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79190589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.720;LDAF=0.0048;AVGPOST=0.9971;RSQ=0.7549;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79190594 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0156;AVGPOST=0.9997;RSQ=0.9900;ERATE=0.0003;THETA=0.0013;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79190603 rs66556325 A AT 51 PASS INDEL;BAVGPOST=0.991;BRSQ=0.727;LDAF=0.0230;AVGPOST=0.9769;RSQ=0.6033;ERATE=0.0064;THETA=0.0012;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79190611 rs67266652 CTTA C 583 PASS INDEL;BAVGPOST=0.994;BRSQ=0.779;LDAF=0.0190;AVGPOST=0.9865;RSQ=0.7010;ERATE=0.0042;THETA=0.0031;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79190647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0158;AVGPOST=0.9994;RSQ=0.9817;ERATE=0.0004;THETA=0.0036;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79190660 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6158;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79190707 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5675;AVGPOST=0.9910;RSQ=0.9881;ERATE=0.0019;THETA=0.0009;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 79190761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.950;LDAF=0.3864;AVGPOST=0.9770;RSQ=0.9666;ERATE=0.0005;THETA=0.0005;AC=843;AN=2184 GT:DS:GL:BD 0.38598901 0
1 79190885 . A AT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79190906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.979;LDAF=0.5400;AVGPOST=0.9806;RSQ=0.9765;ERATE=0.0010;THETA=0.0010;AC=1185;AN=2184 GT:DS:GL:BD 0.54258239 1
1 79191006 . G GTGGATTA 1211 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0076;AVGPOST=0.9969;RSQ=0.8192;ERATE=0.0005;THETA=0.0085;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79191067 . T TCCA 427 PASS INDEL;BAVGPOST=0.997;BRSQ=0.695;LDAF=0.0044;AVGPOST=0.9957;RSQ=0.6203;ERATE=0.0003;THETA=0.0018;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79191070 . G GAAAAAC 1022 PASS INDEL;BAVGPOST=0.795;BRSQ=0.235;LDAF=0.1898;AVGPOST=0.8087;RSQ=0.5606;ERATE=0.0081;THETA=0.0008;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 79191100 . AAAAC A 111 PASS INDEL;BAVGPOST=0.978;BRSQ=0.341;LDAF=0.0241;AVGPOST=0.9736;RSQ=0.5452;ERATE=0.0017;THETA=0.0015;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79191108 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0118;AVGPOST=0.9795;RSQ=0.2475;ERATE=0.0011;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79191118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.928;LDAF=0.5267;AVGPOST=0.9482;RSQ=0.9442;ERATE=0.0017;THETA=0.0010;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 79191159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.945;LDAF=0.4810;AVGPOST=0.9601;RSQ=0.9593;ERATE=0.0004;THETA=0.0013;AC=1059;AN=2184 GT:DS:GL:BD 0.48489010 0
1 79191178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.945;LDAF=0.4805;AVGPOST=0.9601;RSQ=0.9594;ERATE=0.0004;THETA=0.0041;AC=1055;AN=2184 GT:DS:GL:BD 0.48305860 0
1 79191179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0062;AVGPOST=0.9993;RSQ=0.9442;ERATE=0.0004;THETA=0.0056;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79191221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.790;LDAF=0.0413;AVGPOST=0.9798;RSQ=0.8160;ERATE=0.0040;THETA=0.0009;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 79191266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0098;AVGPOST=0.9992;RSQ=0.9665;ERATE=0.0004;THETA=0.0065;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79191294 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4637;ERATE=0.0005;THETA=0.0045;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79191361 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.898;LDAF=0.5173;AVGPOST=0.9139;RSQ=0.9037;ERATE=0.0121;THETA=0.0049;AC=1176;AN=2184 GT:DS:GL:BD 0.53846157 1
1 79191367 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3729;ERATE=0.0004;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79191415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.850;BRSQ=0.808;LDAF=0.3810;AVGPOST=0.9006;RSQ=0.8910;ERATE=0.0014;THETA=0.0009;AC=855;AN=2184 GT:DS:GL:BD 0.39148352 0
1 79191468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.854;BRSQ=0.814;LDAF=0.3860;AVGPOST=0.9014;RSQ=0.8947;ERATE=0.0006;THETA=0.0009;AC=867;AN=2184 GT:DS:GL:BD 0.39697802 0
1 79191469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.456;LDAF=0.0158;AVGPOST=0.9855;RSQ=0.6393;ERATE=0.0009;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79191470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.961;LDAF=0.5499;AVGPOST=0.9825;RSQ=0.9800;ERATE=0.0003;THETA=0.0109;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 79191519 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5522;ERATE=0.0006;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79191594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.5547;AVGPOST=0.9912;RSQ=0.9897;ERATE=0.0005;THETA=0.0019;AC=1215;AN=2184 GT:DS:GL:BD 0.55631870 1
1 79191656 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0025;AVGPOST=0.9980;RSQ=0.6780;ERATE=0.0003;THETA=0.0042;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79191714 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0117;AVGPOST=0.9988;RSQ=0.9592;ERATE=0.0003;THETA=0.0052;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79191724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.543;LDAF=0.0067;AVGPOST=0.9910;RSQ=0.4573;ERATE=0.0016;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79191832 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5571;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79192000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.967;LDAF=0.5598;AVGPOST=0.9690;RSQ=0.9628;ERATE=0.0058;THETA=0.0017;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 79192006 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5676;AVGPOST=0.9969;RSQ=0.9962;ERATE=0.0005;THETA=0.0018;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 79192051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.7013;ERATE=0.0002;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79192077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.5651;AVGPOST=0.9932;RSQ=0.9912;ERATE=0.0009;THETA=0.0080;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 79192247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5055;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79192303 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0042;AVGPOST=0.9983;RSQ=0.8108;ERATE=0.0004;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79192327 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5412;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79192331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0112;AVGPOST=0.9988;RSQ=0.9590;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79192362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.538;LDAF=0.0032;AVGPOST=0.9952;RSQ=0.4306;ERATE=0.0009;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79192372 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0038;AVGPOST=0.9967;RSQ=0.6552;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79192407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0098;AVGPOST=0.9983;RSQ=0.9403;ERATE=0.0004;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79192520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9327;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79192691 rs72073977 GCATT G 26 PASS INDEL;BAVGPOST=0.998;BRSQ=0.795;LDAF=0.0072;AVGPOST=0.9942;RSQ=0.6701;ERATE=0.0026;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79192945 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0111;AVGPOST=0.9957;RSQ=0.8616;ERATE=0.0004;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79192969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.738;LDAF=0.0107;AVGPOST=0.9894;RSQ=0.6356;ERATE=0.0004;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79193017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.720;LDAF=0.0146;AVGPOST=0.9851;RSQ=0.6202;ERATE=0.0016;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79193021 rs71572641 TAACA T 54504 PASS INDEL;BAVGPOST=0.987;BRSQ=0.982;LDAF=0.5534;AVGPOST=0.9726;RSQ=0.9671;ERATE=0.0047;THETA=0.0028;AC=1211;AN=2184 GT:DS:GL:BD 0.55448717 1
1 79193501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0161;AVGPOST=0.9996;RSQ=0.9884;ERATE=0.0003;THETA=0.0008;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79193553 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9350;ERATE=0.0004;THETA=0.0056;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79193595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8441;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79193599 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.791;LDAF=0.0067;AVGPOST=0.9968;RSQ=0.7876;ERATE=0.0004;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79193645 . A AAC 10827 PASS INDEL;BAVGPOST=0.896;BRSQ=0.858;LDAF=0.4738;AVGPOST=0.8851;RSQ=0.8604;ERATE=0.0139;THETA=0.0038;AC=1080;AN=2184 GT:DS:GL:BD 0.49450549 0
1 79193701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79193826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8016;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79193851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0597;AVGPOST=0.9981;RSQ=0.9870;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 79193861 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.696;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7101;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79193936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79194011 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79194131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9953;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79194142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79194203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5521;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79194204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79194453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9127;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79194565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0136;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79194689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0121;AVGPOST=0.9960;RSQ=0.8548;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79194805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8676;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79194839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.781;LDAF=0.0106;AVGPOST=0.9960;RSQ=0.8501;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79194850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0154;AVGPOST=0.9973;RSQ=0.9328;ERATE=0.0005;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79194886 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6543;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79194916 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5996;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79194981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79195003 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79195034 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.5438;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79195044 . TA T 17657 PASS INDEL;BAVGPOST=0.968;BRSQ=0.938;LDAF=0.5991;AVGPOST=0.9450;RSQ=0.9180;ERATE=0.0141;THETA=0.0003;AC=1327;AN=2184 GT:DS:GL:BD 0.60760075 1
1 79195142 . AT A 70876 PASS INDEL;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.6311;AVGPOST=0.9851;RSQ=0.9764;ERATE=0.0027;THETA=0.0003;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 79195143 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79195157 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9792;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79195314 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8910;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79195334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7697;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79195378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8353;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79195420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9845;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79195421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0026;AVGPOST=0.9979;RSQ=0.6989;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79195468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0017;AVGPOST=0.9980;RSQ=0.5273;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79195499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9880;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79195589 . CTT C 106 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79195679 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9230;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79195958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7463;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79196109 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9880;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79196168 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.6364;AVGPOST=0.9922;RSQ=0.9874;ERATE=0.0008;THETA=0.0004;AC=1393;AN=2184 GT:DS:GL:BD 0.63782054 1
1 79196189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79196193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4184;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79196271 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9987;RSQ=0.9607;ERATE=0.0004;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79196320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9997;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79196333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9439;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79196347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0112;AVGPOST=0.9984;RSQ=0.9495;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79196368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0172;AVGPOST=0.9987;RSQ=0.9642;ERATE=0.0005;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79196627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.642;LDAF=0.0035;AVGPOST=0.9972;RSQ=0.6521;ERATE=0.0006;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79196660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.6384;AVGPOST=0.9957;RSQ=0.9920;ERATE=0.0007;THETA=0.0004;AC=1395;AN=2184 GT:DS:GL:BD 0.63873625 1
1 79196665 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79196693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79196724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7525;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79196744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79196879 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79196958 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0143;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79196959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79196961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79197070 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8478;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79197130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79197261 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1144;AVGPOST=0.9976;RSQ=0.9897;ERATE=0.0006;THETA=0.0004;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 79197441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2942;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 79197460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9978;RSQ=0.9363;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79197510 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9990;RSQ=0.9714;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79197513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.917;LDAF=0.0283;AVGPOST=0.9955;RSQ=0.9398;ERATE=0.0004;THETA=0.0011;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79197565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79197591 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0519;AVGPOST=0.9899;RSQ=0.9132;ERATE=0.0012;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 79197677 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.063;LDAF=0.9708;AVGPOST=0.9671;RSQ=0.5335;ERATE=0.0027;THETA=0.0004;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 79197733 . T TG 95 PASS INDEL;BAVGPOST=0.996;BRSQ=0.875;LDAF=0.0357;AVGPOST=0.9659;RSQ=0.6488;ERATE=0.0022;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79197842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.906;LDAF=0.0975;AVGPOST=0.9236;RSQ=0.6753;ERATE=0.0043;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 79197849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.834;LDAF=0.0411;AVGPOST=0.9742;RSQ=0.7708;ERATE=0.0011;THETA=0.0010;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 79197864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0060;AVGPOST=0.9946;RSQ=0.6761;ERATE=0.0006;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79197955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9888;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79197971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5397;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79198011 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.920;LDAF=0.0447;AVGPOST=0.9900;RSQ=0.9118;ERATE=0.0007;THETA=0.0006;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 79198124 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0145;AVGPOST=0.9992;RSQ=0.9759;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79198239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9779;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79198271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4765;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79198280 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9969;RSQ=0.9282;ERATE=0.0005;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79198365 . CA C 115 PASS INDEL;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.8378;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79198445 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79198481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79198523 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0282;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79198577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7739;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79198718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7839;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79198719 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0024;AVGPOST=0.9961;RSQ=0.3918;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79198784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7814;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79198848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5972;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79199010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5907;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79199144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0036;AVGPOST=0.9973;RSQ=0.7367;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79199173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79199282 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8049;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79199319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79199363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0137;AVGPOST=0.9979;RSQ=0.9422;ERATE=0.0004;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79199540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8078;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79199586 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79199745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79200071 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7561;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79200100 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79200132 . G GA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6386;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79200181 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4593;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79200260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79200281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79200453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7556;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79200454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.3946;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79200554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0067;AVGPOST=0.9975;RSQ=0.8483;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79200587 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0101;AVGPOST=0.9979;RSQ=0.9126;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79200657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8380;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79200675 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0015;AVGPOST=0.9978;RSQ=0.3716;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79200687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2071;AVGPOST=0.9873;RSQ=0.9708;ERATE=0.0003;THETA=0.0010;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 79200735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8809;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79200811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79200855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8187;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79200864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79200937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0002;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79200968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7389;ERATE=0.0002;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79201365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.9191;AVGPOST=0.9979;RSQ=0.9878;ERATE=0.0003;THETA=0.0019;AC=2009;AN=2184 GT:DS:GL:BD 0.91987181 1
1 79201388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0053;AVGPOST=0.9988;RSQ=0.8974;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79201389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8964;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79201418 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79201450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79201487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.876;LDAF=0.0113;AVGPOST=0.9988;RSQ=0.9541;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79201566 . CA C 159 PASS INDEL;BAVGPOST=0.977;BRSQ=0.716;LDAF=0.0705;AVGPOST=0.9382;RSQ=0.6750;ERATE=0.0039;THETA=0.0007;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 79201594 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.530;LDAF=0.0675;AVGPOST=0.9326;RSQ=0.5827;ERATE=0.0184;THETA=0.0008;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 79201778 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.896;LDAF=0.0230;AVGPOST=0.9971;RSQ=0.9535;ERATE=0.0005;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 79201804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9203;AVGPOST=0.9953;RSQ=0.9761;ERATE=0.0006;THETA=0.0006;AC=2011;AN=2184 GT:DS:GL:BD 0.92078757 1
1 79201910 . TA T 501 PASS INDEL;BAVGPOST=0.872;BRSQ=0.242;LDAF=0.1536;AVGPOST=0.8203;RSQ=0.4468;ERATE=0.0156;THETA=0.0006;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 79202008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.841;BRSQ=0.463;LDAF=0.7795;AVGPOST=0.7884;RSQ=0.5179;ERATE=0.0306;THETA=0.0007;AC=1822;AN=2184 GT:DS:GL:BD 0.83424908 1
1 79202009 rs79952583 TA T 824 PASS INDEL;BAVGPOST=0.436;BRSQ=0.047;LDAF=0.6943;AVGPOST=0.7067;RSQ=0.4091;ERATE=0.0230;THETA=0.0007;AC=1635;AN=2184 GT:DS:GL:BD 0.74862635 1
1 79202044 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9266;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79202131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8742;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79202210 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6610;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79202216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0114;AVGPOST=0.9984;RSQ=0.9391;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79202326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6423;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79202361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7327;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79202477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6793;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79202756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9296;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79203209 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79203261 . TC T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6178;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79203264 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8655;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79203282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79203500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79203501 . TA T 35 PASS INDEL;BAVGPOST=0.998;BRSQ=0.495;LDAF=0.0092;AVGPOST=0.9905;RSQ=0.6104;ERATE=0.0009;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79203657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5508;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79203796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7289;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79204003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79204055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7478;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79204098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7644;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79204253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7872;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79204271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0022;AVGPOST=0.9997;RSQ=0.9436;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79204346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9308;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79204350 . CCA C 607 PASS INDEL;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9281;ERATE=0.0003;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79204358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.941;LDAF=0.0917;AVGPOST=0.9862;RSQ=0.9385;ERATE=0.0003;THETA=0.0007;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 79204421 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7627;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79204616 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0108;AVGPOST=0.9992;RSQ=0.9711;ERATE=0.0004;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79204617 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79204642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5743;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79205009 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79205292 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79205304 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9697;ERATE=0.0003;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79205367 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9396;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79205426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7657;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79205450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7541;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79205600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9543;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79205701 MERGED_DEL_2_3473 TCAATATGTAATTGGTGATAATTTCAGGATGATGGGTTTATAAGTGAAAACAATATTGCTGTCATGAAATTTTCTTTTATTCTGTAATTGGCTGTTACAGTGTGTTTCTTAGCTAGGAAACAAATGTGATTCACCCCAAGATGGGCCAACCAGCCAACTCACCACCTAAGAGAGAGGGTATCTCTTTAAG T . . SV;BAVGPOST=0.999;BRSQ=0.741;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6518;ERATE=0.0007;THETA=0.0005;CIEND=-17;33;CIPOS=-18;19;END=50771391;HOMLEN=3;HOMSEQ=CAA;SOURCE=GenomeStrip_50769474_50771425;S GT:DS:GL:BD 0.00137363 0
1 79205711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7495;AVGPOST=0.9968;RSQ=0.9939;ERATE=0.0005;THETA=0.0014;AC=1637;AN=2184 GT:DS:GL:BD 0.74954212 1
1 79205872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79205878 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2315;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0003;THETA=0.0010;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 79205949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8836;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79206045 . A AG 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79206108 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0003;THETA=0.0025;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79206147 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.523;LDAF=0.0190;AVGPOST=0.9766;RSQ=0.5381;ERATE=0.0075;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79206153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79206221 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79206284 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79206298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6300;ERATE=0.0005;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79206340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9989;RSQ=0.9483;ERATE=0.0003;THETA=0.0017;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79206400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6978;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79206402 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79206459 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0322;AVGPOST=0.9984;RSQ=0.9804;ERATE=0.0004;THETA=0.0010;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 79206493 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9784;ERATE=0.0003;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79206509 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7725;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79206591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7874;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79206668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79206889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79207023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0072;AVGPOST=0.9969;RSQ=0.8258;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79207046 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79207070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9289;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79207074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79207183 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9963;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79207196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79207283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7327;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79207317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9666;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79207622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9612;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79207758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79207922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7807;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79208005 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79208014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0680;AVGPOST=0.9985;RSQ=0.9931;ERATE=0.0003;THETA=0.0008;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 79208146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79208218 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8292;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79208384 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79208514 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0072;AVGPOST=0.9992;RSQ=0.9490;ERATE=0.0003;THETA=0.0022;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79208524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79208648 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79208966 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9166;ERATE=0.0007;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79209114 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5163;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79209124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3892;ERATE=0.0005;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79209150 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.748;LDAF=0.0056;AVGPOST=0.9984;RSQ=0.8730;ERATE=0.0004;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79209208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0134;AVGPOST=0.9973;RSQ=0.9235;ERATE=0.0006;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79209243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7129;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79209289 rs58796247 A AT 5733 PASS INDEL;BAVGPOST=0.964;BRSQ=0.791;LDAF=0.1088;AVGPOST=0.9273;RSQ=0.7041;ERATE=0.0162;THETA=0.0010;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 79209341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79209390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7041;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79209422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0177;AVGPOST=0.9994;RSQ=0.9832;ERATE=0.0003;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79209620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9739;ERATE=0.0003;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79209657 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79209668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0173;AVGPOST=0.9996;RSQ=0.9897;ERATE=0.0002;THETA=0.0021;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79209743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79209747 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9986;RSQ=0.9061;ERATE=0.0002;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79209748 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8908;ERATE=0.0002;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79209765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0173;AVGPOST=0.9993;RSQ=0.9826;ERATE=0.0002;THETA=0.0007;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79209766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.4410;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79209971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9571;ERATE=0.0002;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79209977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0137;AVGPOST=0.9993;RSQ=0.9803;ERATE=0.0002;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79209998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0146;AVGPOST=0.9992;RSQ=0.9802;ERATE=0.0002;THETA=0.0011;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79210099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0412;AVGPOST=0.9997;RSQ=0.9965;ERATE=0.0002;THETA=0.0007;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 79210110 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9313;ERATE=0.0002;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79210147 . TTAAC T 1188 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0125;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79210290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79210297 . C CT 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79210314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0279;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0008;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79210397 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0002;THETA=0.0008;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79210421 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79210528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0087;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0002;THETA=0.0011;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79210562 rs113247322 C CA 1061 PASS INDEL;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0090;AVGPOST=0.9988;RSQ=0.9449;ERATE=0.0004;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79210588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79210629 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79210676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79210746 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79210801 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9721;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79210965 . A AT 4052 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0412;AVGPOST=0.9981;RSQ=0.9787;ERATE=0.0004;THETA=0.0007;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 79211315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9164;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79211332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79211381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5384;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79211398 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0279;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0002;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79211529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8216;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79211575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8868;ERATE=0.0002;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79211621 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.9024;ERATE=0.0002;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79211769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0280;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79211770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.387;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4108;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79211788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79211877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5956;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79211913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9253;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79211947 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79211950 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79212035 . CAACA C 873 PASS INDEL;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0079;AVGPOST=0.9984;RSQ=0.9062;ERATE=0.0013;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79212050 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8797;ERATE=0.0002;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79212077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6765;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79212136 . GA G 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5345;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79212320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9997;RSQ=0.9819;ERATE=0.0002;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79212342 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79212356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0279;AVGPOST=0.9977;RSQ=0.9626;ERATE=0.0005;THETA=0.0008;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79212381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.559;LDAF=0.0088;AVGPOST=0.9919;RSQ=0.6474;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79212448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0136;AVGPOST=0.9960;RSQ=0.8775;ERATE=0.0006;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79212449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0035;AVGPOST=0.9983;RSQ=0.7989;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79212718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79212817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0074;AVGPOST=0.9991;RSQ=0.9502;ERATE=0.0003;THETA=0.0014;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79212874 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7787;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79213050 . CTTTTT C 337 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9558;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79213086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.793;LDAF=0.0089;AVGPOST=0.9963;RSQ=0.8417;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79213088 . TTTTG T 2100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0160;AVGPOST=0.9969;RSQ=0.9194;ERATE=0.0006;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79213089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79213172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0194;AVGPOST=0.9989;RSQ=0.9773;ERATE=0.0002;THETA=0.0008;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 79213348 . T TC 1735 PASS INDEL;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0113;AVGPOST=0.9979;RSQ=0.9363;ERATE=0.0003;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79213453 rs71578068 C CCTTTTCTCTGT 10175 PASS INDEL;BAVGPOST=0.992;BRSQ=0.902;LDAF=0.0410;AVGPOST=0.9961;RSQ=0.9594;ERATE=0.0005;THETA=0.0006;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 79213522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8643;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79213772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79213793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9995;RSQ=0.9722;ERATE=0.0002;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79213895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5264;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79213920 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0453;AVGPOST=0.9993;RSQ=0.9927;ERATE=0.0002;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 79213969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79213972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.834;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9201;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79213974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0178;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0002;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 79213978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0399;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0002;THETA=0.0005;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 79214036 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9306;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79214043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0411;AVGPOST=0.9993;RSQ=0.9926;ERATE=0.0002;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 79214061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9711;ERATE=0.0002;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79214088 . C CA 25 PASS INDEL;BAVGPOST=0.988;BRSQ=0.414;LDAF=0.0202;AVGPOST=0.9726;RSQ=0.4575;ERATE=0.0078;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79214114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1112;AVGPOST=0.9976;RSQ=0.9914;ERATE=0.0005;THETA=0.0007;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 79214123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79214194 rs5774118 GAC G 528 PASS INDEL;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0059;AVGPOST=0.9982;RSQ=0.8738;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79214325 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0081;AVGPOST=0.9997;RSQ=0.9879;ERATE=0.0002;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79214336 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0002;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79214378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79214411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79214423 . CATT C 99 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5706;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79214656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79214726 rs113646614 G GAT 84 PASS INDEL;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0041;AVGPOST=0.9966;RSQ=0.6661;ERATE=0.0006;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79214818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79214820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79214825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79215061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79215078 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79215336 rs10661906 G GATTC 23058 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0794;AVGPOST=0.9978;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 79215361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.6060;ERATE=0.0004;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79215650 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0002;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79215662 rs11434111 C CA 3034 PASS INDEL;BAVGPOST=0.994;BRSQ=0.920;LDAF=0.0386;AVGPOST=0.9815;RSQ=0.8212;ERATE=0.0034;THETA=0.0007;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 79215672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7397;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79215895 . AAC A 1653 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0135;AVGPOST=0.9985;RSQ=0.9544;ERATE=0.0004;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79216068 . G GTA 4788 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0284;AVGPOST=0.9984;RSQ=0.9755;ERATE=0.0004;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 79216076 . GTATC G 273 PASS INDEL;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0048;AVGPOST=0.9959;RSQ=0.6504;ERATE=0.0010;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79216109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.4856;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79216159 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6799;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79216161 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9663;ERATE=0.0002;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79216456 . CA C 2261 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0152;AVGPOST=0.9995;RSQ=0.9836;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79216486 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8175;ERATE=0.0002;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79216499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79216531 . CTAAT C 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4641;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79216753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8258;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79216914 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1114;AVGPOST=0.9986;RSQ=0.9936;ERATE=0.0004;THETA=0.0008;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 79217035 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9626;ERATE=0.0002;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79217238 . GAT G 825 PASS INDEL;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0098;AVGPOST=0.9988;RSQ=0.9440;ERATE=0.0002;THETA=0.0013;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79217251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.543;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6689;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79217337 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.854;LDAF=0.0077;AVGPOST=0.9971;RSQ=0.8597;ERATE=0.0004;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79217375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0030;AVGPOST=0.9960;RSQ=0.5511;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79217523 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0462;AVGPOST=0.9979;RSQ=0.9809;ERATE=0.0004;THETA=0.0011;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 79217598 rs76742441 T TA 632 PASS INDEL;BAVGPOST=0.690;BRSQ=0.292;LDAF=0.3431;AVGPOST=0.6788;RSQ=0.3891;ERATE=0.0300;THETA=0.0007;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 79217736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8699;ERATE=0.0005;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79217766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0279;AVGPOST=0.9983;RSQ=0.9735;ERATE=0.0006;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 79217780 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0033;AVGPOST=0.9969;RSQ=0.5963;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79217801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0043;AVGPOST=0.9951;RSQ=0.5779;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79217858 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5420;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79217959 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79218031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6255;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79218085 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0182;AVGPOST=0.9980;RSQ=0.9563;ERATE=0.0004;THETA=0.0008;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 79218273 . A ATGTGCT 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4676;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79218411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0118;AVGPOST=0.9993;RSQ=0.9717;ERATE=0.0005;THETA=0.0011;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79218583 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.897;LDAF=0.0406;AVGPOST=0.9843;RSQ=0.8525;ERATE=0.0011;THETA=0.0007;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 79218695 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.668;LDAF=0.0332;AVGPOST=0.9718;RSQ=0.6484;ERATE=0.0051;THETA=0.0011;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 79218714 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.827;LDAF=0.0657;AVGPOST=0.9622;RSQ=0.7608;ERATE=0.0074;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 79218718 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0270;AVGPOST=0.9988;RSQ=0.9810;ERATE=0.0003;THETA=0.0010;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 79218750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7895;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79218786 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79218889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6491;ERATE=0.0004;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79218960 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8897;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79218968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0127;AVGPOST=0.9966;RSQ=0.8884;ERATE=0.0004;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79219001 . ATG A 1874 PASS INDEL;BAVGPOST=0.967;BRSQ=0.694;LDAF=0.0835;AVGPOST=0.9252;RSQ=0.5962;ERATE=0.0264;THETA=0.0011;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 79219052 . GTGTC G 307 PASS INDEL;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0019;AVGPOST=0.9978;RSQ=0.5108;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79219066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0891;AVGPOST=0.9948;RSQ=0.9771;ERATE=0.0010;THETA=0.0025;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 79219173 . TG T 630 PASS INDEL;BAVGPOST=0.997;BRSQ=0.799;LDAF=0.0104;AVGPOST=0.9928;RSQ=0.7154;ERATE=0.0007;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79219338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9582;ERATE=0.0004;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79219580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5914;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79219648 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0122;AVGPOST=0.9958;RSQ=0.8756;ERATE=0.0004;THETA=0.0021;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79219708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0901;AVGPOST=0.9979;RSQ=0.9900;ERATE=0.0006;THETA=0.0007;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 79219749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8374;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79219792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9321;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79219919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9661;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79219921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8034;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79219931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9177;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79219943 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7779;ERATE=0.0005;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79220063 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79220079 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4704;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79220121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0068;AVGPOST=0.9987;RSQ=0.9191;ERATE=0.0005;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79220139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0318;AVGPOST=0.9984;RSQ=0.9806;ERATE=0.0004;THETA=0.0026;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 79220140 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.730;LDAF=0.0058;AVGPOST=0.9955;RSQ=0.7049;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79220243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0420;AVGPOST=0.9983;RSQ=0.9827;ERATE=0.0004;THETA=0.0015;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 79220322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1305;AVGPOST=0.9954;RSQ=0.9846;ERATE=0.0004;THETA=0.0004;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 79220385 . CG C 68 PASS INDEL;BAVGPOST=0.999;BRSQ=0.447;LDAF=0.0034;AVGPOST=0.9948;RSQ=0.3496;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79220398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0037;AVGPOST=0.9975;RSQ=0.7342;ERATE=0.0005;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79220410 . GCCATA G 717 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9562;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79220662 . CT C 79 PASS INDEL;BAVGPOST=1.000;BRSQ=0.707;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3849;ERATE=0.0008;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79220733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4425;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79220743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0109;AVGPOST=0.9981;RSQ=0.9320;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79220773 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79220793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0030;AVGPOST=0.9967;RSQ=0.5380;ERATE=0.0016;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79220851 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79220865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9695;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79221061 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0044;AVGPOST=0.9966;RSQ=0.6620;ERATE=0.0011;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79221193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9969;RSQ=0.8161;ERATE=0.0005;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79221239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0049;AVGPOST=0.9971;RSQ=0.7337;ERATE=0.0007;THETA=0.0045;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79221245 rs10650721 A AAAAC 42297 PASS INDEL;BAVGPOST=0.971;BRSQ=0.958;LDAF=0.3605;AVGPOST=0.9796;RSQ=0.9758;ERATE=0.0019;THETA=0.0005;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 79221321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79221342 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8231;ERATE=0.0009;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79221351 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.820;LDAF=0.0141;AVGPOST=0.9942;RSQ=0.8378;ERATE=0.0006;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79221394 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6395;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79221404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0074;AVGPOST=0.9979;RSQ=0.8856;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79221409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79221423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8753;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79221570 . C CGA 1633 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9977;RSQ=0.8760;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79221674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79221902 . TG T 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6571;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79221931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.917;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7676;ERATE=0.0003;THETA=0.0031;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79221934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79221943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8445;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79222043 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7585;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79222073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0023;AVGPOST=0.9971;RSQ=0.4354;ERATE=0.0007;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79222120 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.698;LDAF=0.0056;AVGPOST=0.9959;RSQ=0.7514;ERATE=0.0004;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79222148 . A AT 604 PASS INDEL;BAVGPOST=0.993;BRSQ=0.711;LDAF=0.0197;AVGPOST=0.9777;RSQ=0.5276;ERATE=0.0047;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79222192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79222291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7921;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79222297 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9368;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79222394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0476;AVGPOST=0.9984;RSQ=0.9877;ERATE=0.0004;THETA=0.0006;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 79222458 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0406;AVGPOST=0.9992;RSQ=0.9906;ERATE=0.0004;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 79222477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.966;LDAF=0.0621;AVGPOST=0.9968;RSQ=0.9816;ERATE=0.0004;THETA=0.0011;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 79222701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5899;ERATE=0.0007;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79222716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0332;AVGPOST=0.9957;RSQ=0.9540;ERATE=0.0004;THETA=0.0008;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 79222717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7286;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79222720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.820;LDAF=0.0276;AVGPOST=0.9909;RSQ=0.8763;ERATE=0.0005;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 79222762 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3692;AVGPOST=0.9933;RSQ=0.9915;ERATE=0.0004;THETA=0.0012;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 79222810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.5313;ERATE=0.0008;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79222848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.966;LDAF=0.1641;AVGPOST=0.9871;RSQ=0.9671;ERATE=0.0014;THETA=0.0006;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 79222857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0070;AVGPOST=0.9978;RSQ=0.8545;ERATE=0.0007;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79222861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0133;AVGPOST=0.9968;RSQ=0.9233;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79222894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0078;AVGPOST=0.9972;RSQ=0.8577;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79222896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79222950 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79223024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0058;AVGPOST=0.9979;RSQ=0.8769;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79223050 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79223059 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9517;ERATE=0.0003;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79223119 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9389;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79223205 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79223253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.889;LDAF=0.0076;AVGPOST=0.9973;RSQ=0.8580;ERATE=0.0008;THETA=0.0030;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79223435 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0114;AVGPOST=0.9971;RSQ=0.8952;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79223691 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9676;ERATE=0.0005;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79223881 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79223977 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0030;AVGPOST=0.9987;RSQ=0.8430;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79224169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5597;ERATE=0.0004;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79224288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79224624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7327;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79224652 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0055;AVGPOST=0.9986;RSQ=0.8955;ERATE=0.0003;THETA=0.0021;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79224855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0160;AVGPOST=0.9984;RSQ=0.9602;ERATE=0.0003;THETA=0.0014;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79225054 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79225085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79225150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79225151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7604;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79225173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79225191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79225201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0384;AVGPOST=0.9993;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 79225207 MERGED_DEL_2_3617 G ADELA . . SV;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0005;THETA=0.0014;CIEND=-17;33;CIPOS=-18;19;END=55015465;SOURCE=GenomeStrip_55014024_55015465;SVTYPE=DEL;AC=1;AN=21 GT:DS:GL:BD 0.00045788 0
1 79225218 rs113953446 GA G 841 PASS INDEL;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0143;AVGPOST=0.9964;RSQ=0.8954;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79225261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1046;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 79225289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7498;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0003;THETA=0.0012;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 79225293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0606;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0004;THETA=0.0010;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 79225294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1032;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 79225296 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7807;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79225299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9424;ERATE=0.0008;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79225308 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79225326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6359;AVGPOST=0.9959;RSQ=0.9940;ERATE=0.0005;THETA=0.0012;AC=1387;AN=2184 GT:DS:GL:BD 0.63507324 1
1 79225354 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0116;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79225380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8577;ERATE=0.0004;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79225552 . TGTGA T 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4061;ERATE=0.0003;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79225629 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.2794;AVGPOST=0.9881;RSQ=0.9789;ERATE=0.0005;THETA=0.0110;AC=607;AN=2184 GT:DS:GL:BD 0.27793041 0
1 79225686 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0052;AVGPOST=0.9988;RSQ=0.9243;ERATE=0.0003;THETA=0.0067;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79225689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0136;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79225713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4217;ERATE=0.0003;THETA=0.0178;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79225740 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.945;LDAF=0.1363;AVGPOST=0.9821;RSQ=0.9412;ERATE=0.0020;THETA=0.0134;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 79225789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4331;ERATE=0.0005;THETA=0.0215;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79225793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6231;ERATE=0.0004;THETA=0.0195;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79225799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0378;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79225820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0317;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79225919 . A AG 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4333;ERATE=0.0005;THETA=0.0123;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79225932 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0303;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79225980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.942;LDAF=0.0983;AVGPOST=0.9863;RSQ=0.9423;ERATE=0.0022;THETA=0.0291;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 79226016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0138;AVGPOST=0.9980;RSQ=0.9447;ERATE=0.0004;THETA=0.0227;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79226054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0223;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79226170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.949;LDAF=0.0150;AVGPOST=0.9979;RSQ=0.9481;ERATE=0.0003;THETA=0.0356;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79226259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.950;LDAF=0.1041;AVGPOST=0.9920;RSQ=0.9655;ERATE=0.0035;THETA=0.0136;AC=225;AN=2184 GT:DS:GL:BD 0.10302198 0
1 79226317 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.947;LDAF=0.1076;AVGPOST=0.9892;RSQ=0.9611;ERATE=0.0005;THETA=0.0172;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 79226363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7357;ERATE=0.0005;THETA=0.0110;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79226435 . TG T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5421;ERATE=0.0004;THETA=0.0165;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79226506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.892;LDAF=0.2253;AVGPOST=0.9569;RSQ=0.9118;ERATE=0.0098;THETA=0.0203;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 79226570 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.901;LDAF=0.1661;AVGPOST=0.9664;RSQ=0.9076;ERATE=0.0057;THETA=0.0055;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 79226679 . C CAAA 617 PASS INDEL;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8278;ERATE=0.0006;THETA=0.0146;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79226683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7513;ERATE=0.0004;THETA=0.0076;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79226704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.428;LDAF=0.0068;AVGPOST=0.9904;RSQ=0.4680;ERATE=0.0015;THETA=0.0077;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79227016 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.3058;ERATE=0.0004;THETA=0.0045;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79227095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9429;ERATE=0.0003;THETA=0.0146;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79227134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0544;AVGPOST=0.9966;RSQ=0.9774;ERATE=0.0004;THETA=0.0015;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 79227160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0185;AVGPOST=0.9982;RSQ=0.9654;ERATE=0.0004;THETA=0.0026;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 79227165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4765;ERATE=0.0004;THETA=0.0180;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79227191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7905;ERATE=0.0003;THETA=0.0067;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79227383 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4514;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79227578 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.3175;ERATE=0.0004;THETA=0.0100;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79227608 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0095;AVGPOST=0.9992;RSQ=0.9658;ERATE=0.0003;THETA=0.0043;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79227643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0097;AVGPOST=0.9988;RSQ=0.9498;ERATE=0.0005;THETA=0.0013;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79227684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7325;ERATE=0.0005;THETA=0.0091;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79227710 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79227727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6646;ERATE=0.0003;THETA=0.0049;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79227812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4217;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79227833 . A AG 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0023;AVGPOST=0.9966;RSQ=0.3814;ERATE=0.0006;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79227913 . A AG 106 PASS INDEL;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0041;AVGPOST=0.9962;RSQ=0.6035;ERATE=0.0006;THETA=0.0070;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79228011 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.873;LDAF=0.3618;AVGPOST=0.9376;RSQ=0.8981;ERATE=0.0036;THETA=0.0013;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 79228026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79228169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0003;THETA=0.0041;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79228206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8496;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79228265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0063;AVGPOST=0.9986;RSQ=0.9105;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79228270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5507;ERATE=0.0006;THETA=0.0077;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79228309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0220;AVGPOST=0.9970;RSQ=0.9448;ERATE=0.0009;THETA=0.0021;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 79228329 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0802;AVGPOST=0.9968;RSQ=0.9826;ERATE=0.0007;THETA=0.0011;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 79228403 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79228542 . G GT 17 PASS INDEL;BAVGPOST=0.992;BRSQ=0.554;LDAF=0.0177;AVGPOST=0.9780;RSQ=0.5221;ERATE=0.0035;THETA=0.0061;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79228634 . C CGGT 4264 PASS INDEL;BAVGPOST=0.996;BRSQ=0.951;LDAF=0.0332;AVGPOST=0.9949;RSQ=0.9411;ERATE=0.0003;THETA=0.0017;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 79228671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79228797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9752;ERATE=0.0003;THETA=0.0027;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79228821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9849;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79228843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0399;AVGPOST=0.9971;RSQ=0.9708;ERATE=0.0004;THETA=0.0011;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 79228930 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79228937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8050;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79228957 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0090;AVGPOST=0.9994;RSQ=0.9700;ERATE=0.0004;THETA=0.0014;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79228987 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.798;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7486;ERATE=0.0014;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79229184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6701;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79229366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79229390 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.849;LDAF=0.0037;AVGPOST=0.9987;RSQ=0.8742;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79229407 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9807;AVGPOST=0.9998;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 79229432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9494;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79229499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0613;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 79229636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5686;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79229678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79229679 . CTT C 144 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7158;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79229721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1638;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 79229726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5033;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0005;THETA=0.0001;AC=1100;AN=2184 GT:DS:GL:BD 0.50366300 1
1 79229787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79229855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8774;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79229928 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6120;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79230110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0072;AVGPOST=0.9967;RSQ=0.8234;ERATE=0.0005;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79230156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3380;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 79230311 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79230322 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9774;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79230332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3381;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 79230402 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4781;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79230456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0641;AVGPOST=0.9977;RSQ=0.9869;ERATE=0.0004;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 79230470 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0086;AVGPOST=0.9987;RSQ=0.9375;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79230546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.7108;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79230558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2115;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 79230751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79230780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79230806 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79230865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0074;AVGPOST=0.9988;RSQ=0.9458;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79230869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9164;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79230870 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1093;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 79230888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0778;AVGPOST=0.9979;RSQ=0.9890;ERATE=0.0004;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 79230935 . C CT 57 PASS INDEL;BAVGPOST=0.989;BRSQ=0.489;LDAF=0.0262;AVGPOST=0.9630;RSQ=0.4327;ERATE=0.0071;THETA=0.0001;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79230962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79231048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2099;AVGPOST=0.9984;RSQ=0.9960;ERATE=0.0008;THETA=0.0002;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 79231070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79231151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79231256 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3382;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0004;THETA=0.0001;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 79231294 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0059;AVGPOST=0.9993;RSQ=0.9573;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79231373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0614;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 79231395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9993;RSQ=0.9717;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79231403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79231432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79231448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5277;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79231575 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.5550;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79231585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79231599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9742;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79231600 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5456;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79231652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9419;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79231725 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9885;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79231840 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79231974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3380;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 79231998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79232040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9256;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79232053 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3380;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 79232068 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3241;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0004;THETA=0.0001;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 79232074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.976;LDAF=0.2175;AVGPOST=0.9916;RSQ=0.9831;ERATE=0.0005;THETA=0.0003;AC=475;AN=2184 GT:DS:GL:BD 0.21749084 0
1 79232139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79232185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79232217 . TA T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8955;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79232259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7701;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79232264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1656;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 79232306 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4500;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79232408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79232451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79232460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0068;AVGPOST=0.9991;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79232548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0078;AVGPOST=0.9998;RSQ=0.9859;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79232571 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0061;AVGPOST=0.9989;RSQ=0.9345;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79232604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2117;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0006;THETA=0.0005;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 79232666 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3382;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0006;THETA=0.0003;AC=739;AN=2184 GT:DS:GL:BD 0.33836997 0
1 79232860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79232889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9674;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79232916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3272;AVGPOST=0.9971;RSQ=0.9951;ERATE=0.0005;THETA=0.0003;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 79232929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.746;LDAF=0.0034;AVGPOST=0.9952;RSQ=0.4340;ERATE=0.0010;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79232956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.7983;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79232987 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0778;AVGPOST=0.9990;RSQ=0.9938;ERATE=0.0005;THETA=0.0004;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 79233067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79233158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8824;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79233195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79233243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6035;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79233307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7877;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79233346 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8375;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79233354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79233473 . C CT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5021;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79233501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79233511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.5895;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79233563 . C CAG 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79233579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7857;AVGPOST=0.9974;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 79233619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0032;AVGPOST=0.9980;RSQ=0.7570;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79233717 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5924;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79233812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.5597;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79233937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2104;AVGPOST=0.9978;RSQ=0.9946;ERATE=0.0007;THETA=0.0005;AC=457;AN=2184 GT:DS:GL:BD 0.20924908 0
1 79233951 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7532;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79233965 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79234005 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.4912;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79234069 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79234096 . T TA 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79234174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79234301 . CT C 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79234348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79234453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0217;AVGPOST=0.9982;RSQ=0.9643;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79234612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79234702 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5273;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79234775 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0066;AVGPOST=0.9968;RSQ=0.8153;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79234856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5603;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79235027 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8875;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79235117 . TA T 23 PASS INDEL;BAVGPOST=0.982;BRSQ=0.047;LDAF=0.0725;AVGPOST=0.8843;RSQ=0.3399;ERATE=0.0041;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 79235217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7365;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79235272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79235299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6424;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79235319 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79235365 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79235375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7383;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79235417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2556;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0005;THETA=0.0002;AC=558;AN=2184 GT:DS:GL:BD 0.25549451 0
1 79235587 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0427;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 79235703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6885;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79235793 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6328;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79235842 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6047;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 79236022 . CAGA C 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4701;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79236083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79236108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6811;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79236158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3326;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 79236223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9862;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=2154;AN=2184 GT:DS:GL:BD 0.98626375 1
1 79236225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.8191;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79236256 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79236330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2598;AVGPOST=0.9964;RSQ=0.9923;ERATE=0.0006;THETA=0.0003;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 79236370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4222;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79236421 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8427;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79236500 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7647;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79236537 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8245;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79236576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5586;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79236910 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3534;AVGPOST=0.9983;RSQ=0.9968;ERATE=0.0006;THETA=0.0001;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 79236952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9243;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79236964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79236985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6665;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79237001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79237123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.9851;AVGPOST=0.9993;RSQ=0.9802;ERATE=0.0003;THETA=0.0004;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 79237233 . T TTA 773 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.8211;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79237299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6066;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79237360 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79237451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7575;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79237598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9222;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79237635 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2555;AVGPOST=0.9969;RSQ=0.9937;ERATE=0.0006;THETA=0.0004;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 79237659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2545;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0007;THETA=0.0003;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 79237775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2547;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=556;AN=2184 GT:DS:GL:BD 0.25457877 0
1 79237855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3817;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 79237898 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9830;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79237978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0425;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 79238008 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3468;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 79238010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3828;AVGPOST=0.9976;RSQ=0.9959;ERATE=0.0006;THETA=0.0004;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 79238074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6042;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=1319;AN=2184 GT:DS:GL:BD 0.60393775 1
1 79238096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3821;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 79238132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3479;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 79238223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79238382 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6327;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79238435 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5259;AVGPOST=0.9978;RSQ=0.9964;ERATE=0.0007;THETA=0.0008;AC=1150;AN=2184 GT:DS:GL:BD 0.52655679 1
1 79238450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0144;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79238485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9297;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79238505 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0033;AVGPOST=0.9992;RSQ=0.9209;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79238643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9984;RSQ=0.9478;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79238697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4613;AVGPOST=0.9985;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=1005;AN=2184 GT:DS:GL:BD 0.46016484 0
1 79238844 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4957;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79238901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9669;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79238937 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79239102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5250;AVGPOST=0.9980;RSQ=0.9970;ERATE=0.0005;THETA=0.0003;AC=1150;AN=2184 GT:DS:GL:BD 0.52655679 1
1 79239143 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.6478;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79239193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79239341 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9179;ERATE=0.0003;THETA=0.0054;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79239491 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9395;ERATE=0.0006;THETA=0.0034;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79239538 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.968;LDAF=0.8282;AVGPOST=0.9920;RSQ=0.9784;ERATE=0.0004;THETA=0.0003;AC=1812;AN=2184 GT:DS:GL:BD 0.82967031 1
1 79239566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8614;ERATE=0.0004;THETA=0.0072;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79239713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79239845 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0597;AVGPOST=0.9989;RSQ=0.9929;ERATE=0.0003;THETA=0.0003;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 79239868 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7576;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79239919 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5191;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79239935 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9103;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79240011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0112;AVGPOST=0.9987;RSQ=0.9679;ERATE=0.0004;THETA=0.0047;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79240065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0051;AVGPOST=0.9958;RSQ=0.7147;ERATE=0.0013;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79240103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8129;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79240132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.6392;AVGPOST=0.9964;RSQ=0.9934;ERATE=0.0004;THETA=0.0008;AC=1398;AN=2184 GT:DS:GL:BD 0.64010990 1
1 79240332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79240402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79240458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9996;AVGPOST=0.9992;RSQ=0.1771;ERATE=0.0003;THETA=0.0005;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 79240540 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79240564 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0588;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 79240609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79240792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7705;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79241126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79241274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79241313 . G GT 169 PASS INDEL;BAVGPOST=0.998;BRSQ=0.595;LDAF=0.0046;AVGPOST=0.9949;RSQ=0.5301;ERATE=0.0015;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79241316 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6871;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79241326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0004;THETA=0.0039;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79241374 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79241406 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0176;AVGPOST=0.9989;RSQ=0.9711;ERATE=0.0004;THETA=0.0008;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79241421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0583;AVGPOST=0.9984;RSQ=0.9881;ERATE=0.0004;THETA=0.0005;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 79241430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0065;AVGPOST=0.9968;RSQ=0.8222;ERATE=0.0004;THETA=0.0034;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79241504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6813;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79241535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7138;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79241570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0589;AVGPOST=0.9971;RSQ=0.9790;ERATE=0.0005;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 79241626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6346;AVGPOST=0.9891;RSQ=0.9812;ERATE=0.0008;THETA=0.0003;AC=1387;AN=2184 GT:DS:GL:BD 0.63507324 1
1 79241664 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5053;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79241671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.792;LDAF=0.0426;AVGPOST=0.9832;RSQ=0.8510;ERATE=0.0005;THETA=0.0007;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 79241700 . C CA 70 PASS INDEL;BAVGPOST=0.984;BRSQ=0.502;LDAF=0.0314;AVGPOST=0.9654;RSQ=0.5330;ERATE=0.0050;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 79241708 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.856;LDAF=0.0521;AVGPOST=0.9900;RSQ=0.9288;ERATE=0.0015;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 79241715 rs35688917 C CA 2536 PASS INDEL;BAVGPOST=0.982;BRSQ=0.881;LDAF=0.0858;AVGPOST=0.9576;RSQ=0.7828;ERATE=0.0096;THETA=0.0005;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 79241724 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8863;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79241839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6954;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79241859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1992;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=435;AN=2184 GT:DS:GL:BD 0.19917582 0
1 79241973 rs78774357 CT C 10597 PASS INDEL;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0795;AVGPOST=0.9979;RSQ=0.9896;ERATE=0.0004;THETA=0.0011;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 79242068 . TG T 793 PASS INDEL;BAVGPOST=0.976;BRSQ=0.841;LDAF=0.0604;AVGPOST=0.9777;RSQ=0.8839;ERATE=0.0004;THETA=0.0006;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 79242072 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4362;AVGPOST=0.9927;RSQ=0.9883;ERATE=0.0005;THETA=0.0003;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 79242176 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8031;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79242230 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79242238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5888;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79242246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79242265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6973;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79242313 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.463;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4556;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79242372 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79242392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9293;ERATE=0.0004;THETA=0.0037;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79242422 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9983;RSQ=0.8869;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79242506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8686;ERATE=0.0004;THETA=0.0043;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79242831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79242973 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.1978;AVGPOST=0.9938;RSQ=0.9880;ERATE=0.0004;THETA=0.0037;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 79242974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.965;LDAF=0.1190;AVGPOST=0.9912;RSQ=0.9708;ERATE=0.0004;THETA=0.0085;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 79243015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8319;ERATE=0.0008;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79243072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0056;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79243166 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79243231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79243243 . AG A 88 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5081;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79243252 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8598;ERATE=0.0003;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79243402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.3078;ERATE=0.0003;THETA=0.0104;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79243445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9335;ERATE=0.0003;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79243571 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7666;ERATE=0.0004;THETA=0.0119;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79243589 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0061;AVGPOST=0.9990;RSQ=0.9419;ERATE=0.0004;THETA=0.0024;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79243623 . AG A 1238 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0092;AVGPOST=0.9982;RSQ=0.9317;ERATE=0.0005;THETA=0.0044;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79243648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6378;ERATE=0.0003;THETA=0.0166;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79243674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7141;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79243766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79243778 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6266;ERATE=0.0004;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79243870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9302;ERATE=0.0003;THETA=0.0057;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79243879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79243902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7632;ERATE=0.0006;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79243921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5924;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79244101 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79244278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8441;ERATE=0.0003;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79244336 . TG T 549 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79244453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79244460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8816;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79244475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9176;ERATE=0.0003;THETA=0.0036;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79244519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7650;ERATE=0.0010;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79244565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5192;ERATE=0.0004;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79244739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79244920 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79244948 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0370;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 79245020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79245058 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.5159;AVGPOST=0.9864;RSQ=0.9811;ERATE=0.0009;THETA=0.0004;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 79245097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0440;AVGPOST=0.9995;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 79245184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9963;AVGPOST=0.9997;RSQ=0.9728;ERATE=0.0004;THETA=0.0008;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 79245205 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0443;AVGPOST=0.9990;RSQ=0.9904;ERATE=0.0004;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 79245260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79245374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79245390 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79245434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79245541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0077;AVGPOST=0.9994;RSQ=0.9763;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79245576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0020;AVGPOST=0.9976;RSQ=0.5325;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79245725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79245767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9400;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79245808 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0005;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79245854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79246050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9762;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79246171 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0359;AVGPOST=0.9994;RSQ=0.9925;ERATE=0.0004;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 79246273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8380;AVGPOST=0.9981;RSQ=0.9947;ERATE=0.0004;THETA=0.0002;AC=1830;AN=2184 GT:DS:GL:BD 0.83791208 1
1 79246277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0430;AVGPOST=0.9999;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 79246321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79246324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5060;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79246473 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0459;AVGPOST=0.9966;RSQ=0.9688;ERATE=0.0006;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 79246513 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.5811;ERATE=0.0008;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79246542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0358;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 79246643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7926;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79246647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6947;AVGPOST=0.9986;RSQ=0.9981;ERATE=0.0005;THETA=0.0004;AC=1516;AN=2184 GT:DS:GL:BD 0.69413918 1
1 79246659 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7357;AVGPOST=0.9987;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=1606;AN=2184 GT:DS:GL:BD 0.73534799 1
1 79246738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79246821 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6942;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79246951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79246977 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79246991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0077;AVGPOST=0.9994;RSQ=0.9699;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79247034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79247091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9708;ERATE=0.0004;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79247142 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5628;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79247244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0171;AVGPOST=0.9995;RSQ=0.9863;ERATE=0.0004;THETA=0.0009;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79247273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79247281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0205;AVGPOST=0.9981;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 79247356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4322;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79247358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.9960;AVGPOST=0.9994;RSQ=0.9553;ERATE=0.0003;THETA=0.0004;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 79247476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7251;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79247526 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79247667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79247668 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79247673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0091;AVGPOST=0.9984;RSQ=0.9264;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79247906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9823;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79247931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6948;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79247956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79248135 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79248212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8987;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79248246 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8639;ERATE=0.0014;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79248252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79248277 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9689;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79248303 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8507;ERATE=0.0004;THETA=0.0015;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79248327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79248419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9345;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79248458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7054;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79248574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7745;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79248599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7980;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79248668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6632;ERATE=0.0006;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79248689 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7941;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79248695 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6318;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79248824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9785;ERATE=0.0003;THETA=0.0011;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79248839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0422;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 79248860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9754;ERATE=0.0003;THETA=0.0009;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79248889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0094;AVGPOST=0.9980;RSQ=0.9071;ERATE=0.0014;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79248946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79248947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0058;AVGPOST=0.9992;RSQ=0.9371;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79249110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79249228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9560;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79249239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0164;AVGPOST=0.9990;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79249258 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6490;ERATE=0.0007;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79249592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0094;AVGPOST=0.9957;RSQ=0.8186;ERATE=0.0020;THETA=0.0012;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79249600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79249640 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0342;AVGPOST=0.9991;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 79249655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.870;BRSQ=0.328;LDAF=0.1657;AVGPOST=0.8009;RSQ=0.4146;ERATE=0.0168;THETA=0.0007;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 79249830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.669;BRSQ=0.269;LDAF=0.3630;AVGPOST=0.6675;RSQ=0.3642;ERATE=0.0807;THETA=0.0007;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 79249838 . TCCC T 718 PASS INDEL;BAVGPOST=0.750;BRSQ=0.134;LDAF=0.2533;AVGPOST=0.6623;RSQ=0.2510;ERATE=0.0326;THETA=0.0008;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 79249841 . CCT C 4649 PASS INDEL;BAVGPOST=0.937;BRSQ=0.132;LDAF=0.8930;AVGPOST=0.8433;RSQ=0.3504;ERATE=0.0096;THETA=0.0006;AC=2051;AN=2184 GT:DS:GL:BD 0.93910259 1
1 79249862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0025;AVGPOST=0.9977;RSQ=0.6690;ERATE=0.0010;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79250059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0055;AVGPOST=0.9985;RSQ=0.8841;ERATE=0.0006;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79250085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9296;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79250172 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.5998;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79250257 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79250297 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79250433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79250482 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79250617 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.897;LDAF=0.0089;AVGPOST=0.9966;RSQ=0.8585;ERATE=0.0003;THETA=0.0024;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79250843 . C CT 18 PASS INDEL;BAVGPOST=0.998;BRSQ=0.358;LDAF=0.0020;AVGPOST=0.9968;RSQ=0.3361;ERATE=0.0007;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79250851 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0346;AVGPOST=0.9983;RSQ=0.9804;ERATE=0.0004;THETA=0.0012;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 79250870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0040;AVGPOST=0.9974;RSQ=0.7422;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79251042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8573;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79251117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79251186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0667;AVGPOST=0.9983;RSQ=0.9904;ERATE=0.0004;THETA=0.0012;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 79251195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79251233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8108;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79251403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0138;AVGPOST=0.9986;RSQ=0.9587;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79251410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0720;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0015;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 79251436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0557;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0007;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 79251441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8797;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79251474 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79251637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79251741 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79251804 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1372;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0009;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 79252077 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9512;ERATE=0.0004;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79252087 . GT G 261 PASS INDEL;BAVGPOST=0.989;BRSQ=0.862;LDAF=0.0395;AVGPOST=0.9938;RSQ=0.9327;ERATE=0.0004;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 79252098 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1480;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0008;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 79252099 rs3830824 TA T 4948 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0464;AVGPOST=0.9926;RSQ=0.9347;ERATE=0.0012;THETA=0.0007;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 79252099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79252189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1929;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0009;AC=421;AN=2184 GT:DS:GL:BD 0.19276556 0
1 79252194 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1938;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0025;AC=423;AN=2184 GT:DS:GL:BD 0.19368131 0
1 79252229 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79252283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0956;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0011;THETA=0.0023;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 79252284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79252395 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79252650 . A AT 311 PASS INDEL;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0045;AVGPOST=0.9967;RSQ=0.6906;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79252666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0266;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 79252695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0576;AVGPOST=0.9988;RSQ=0.9919;ERATE=0.0005;THETA=0.0006;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 79252724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8631;ERATE=0.0005;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79252756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9461;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79252876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79252885 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79252973 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6445;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79253037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3958;ERATE=0.0003;THETA=0.0009;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79253093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6990;ERATE=0.0007;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79253171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79253181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0038;AVGPOST=0.9985;RSQ=0.8561;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79253291 . ATGT A 1572 PASS INDEL;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0079;AVGPOST=0.9969;RSQ=0.8649;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79253373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0076;AVGPOST=0.9990;RSQ=0.9582;ERATE=0.0003;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79253462 . G GT 514 PASS INDEL;BAVGPOST=0.968;BRSQ=0.541;LDAF=0.0539;AVGPOST=0.9354;RSQ=0.4814;ERATE=0.0179;THETA=0.0020;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 79253548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9339;ERATE=0.0004;THETA=0.0020;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79253633 . C CT 520 PASS INDEL;BAVGPOST=0.997;BRSQ=0.661;LDAF=0.0078;AVGPOST=0.9899;RSQ=0.4937;ERATE=0.0026;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79253664 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79253783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9874;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79253798 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0848;AVGPOST=0.9968;RSQ=0.9864;ERATE=0.0003;THETA=0.0012;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 79253992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9121;ERATE=0.0003;THETA=0.0015;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79254153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79254220 . GA G 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.6999;ERATE=0.0005;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79254350 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0714;AVGPOST=0.9975;RSQ=0.9846;ERATE=0.0004;THETA=0.0014;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 79254368 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0155;AVGPOST=0.9987;RSQ=0.9686;ERATE=0.0004;THETA=0.0012;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79254496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1314;AVGPOST=0.9974;RSQ=0.9926;ERATE=0.0004;THETA=0.0002;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 79254593 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.811;LDAF=0.0108;AVGPOST=0.9968;RSQ=0.8887;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79254720 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6753;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79254746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7278;ERATE=0.0003;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79254872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5673;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79254879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0087;AVGPOST=0.9992;RSQ=0.9627;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79254988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9397;ERATE=0.0004;THETA=0.0018;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79255000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0167;AVGPOST=0.9995;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79255179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3092;AVGPOST=0.9947;RSQ=0.9896;ERATE=0.0030;THETA=0.0004;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 79255212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79255310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79255332 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79255354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9428;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79255818 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8613;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79255860 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6003;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79255879 . T TG 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8728;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79255910 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79256066 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0973;AVGPOST=0.9982;RSQ=0.9922;ERATE=0.0004;THETA=0.0002;AC=213;AN=2184 GT:DS:GL:BD 0.09752747 0
1 79256077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79256188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0112;AVGPOST=0.9985;RSQ=0.9581;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79256195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8710;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79256232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2168;AVGPOST=0.9957;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 79256258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79256270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7015;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79256291 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79256400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9173;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79256530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.697;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8283;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79256604 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6908;ERATE=0.0005;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79256661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9959;ERATE=0.0003;THETA=0.0001;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79256676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79256677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79256745 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6749;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79256905 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.717;LDAF=0.0065;AVGPOST=0.9954;RSQ=0.7201;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79256929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79256936 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.7040;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79256939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0963;AVGPOST=0.9963;RSQ=0.9832;ERATE=0.0005;THETA=0.0005;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 79256961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79257160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0920;AVGPOST=0.9983;RSQ=0.9919;ERATE=0.0003;THETA=0.0003;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 79257273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0024;AVGPOST=0.9967;RSQ=0.5479;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79257369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79257482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0405;AVGPOST=0.9989;RSQ=0.9903;ERATE=0.0003;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 79257629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9128;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79257685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5616;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79257688 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.1852;AVGPOST=0.9942;RSQ=0.9873;ERATE=0.0004;THETA=0.0001;AC=402;AN=2184 GT:DS:GL:BD 0.18406594 0
1 79257730 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79257748 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79257760 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79257792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79257814 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0171;AVGPOST=0.9996;RSQ=0.9887;ERATE=0.0003;THETA=0.0014;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79257815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79257860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0083;AVGPOST=0.9987;RSQ=0.9313;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79258025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.995;LDAF=0.5603;AVGPOST=0.9936;RSQ=0.9908;ERATE=0.0007;THETA=0.0012;AC=1223;AN=2184 GT:DS:GL:BD 0.55998170 1
1 79258070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0118;AVGPOST=0.9980;RSQ=0.9283;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79258095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0921;AVGPOST=0.9960;RSQ=0.9825;ERATE=0.0006;THETA=0.0038;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 79258348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9470;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79258503 . TA T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4979;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79258508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9004;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79258569 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1718;AVGPOST=0.9964;RSQ=0.9899;ERATE=0.0003;THETA=0.0089;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 79258634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6419;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79258645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7535;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79258685 rs35106191 T TC 30190 PASS INDEL;BAVGPOST=0.985;BRSQ=0.980;LDAF=0.2280;AVGPOST=0.9923;RSQ=0.9875;ERATE=0.0006;THETA=0.0009;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 79258751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.983;LDAF=0.0716;AVGPOST=0.9975;RSQ=0.9867;ERATE=0.0003;THETA=0.0017;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 79258760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79259027 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79259175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0013;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79259186 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79259207 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9247;ERATE=0.0003;THETA=0.0048;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79259220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79259239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0051;AVGPOST=0.9975;RSQ=0.8298;ERATE=0.0004;THETA=0.0015;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79259248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0046;AVGPOST=0.9977;RSQ=0.8036;ERATE=0.0006;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79259305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.926;LDAF=0.0370;AVGPOST=0.9926;RSQ=0.9271;ERATE=0.0003;THETA=0.0012;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 79259307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9124;ERATE=0.0003;THETA=0.0037;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79259374 rs60691463 A AG 974 PASS INDEL;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0077;AVGPOST=0.9977;RSQ=0.8808;ERATE=0.0004;THETA=0.0012;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79259393 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6267;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79259397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0093;AVGPOST=0.9989;RSQ=0.9439;ERATE=0.0004;THETA=0.0034;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79259398 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.978;LDAF=0.6687;AVGPOST=0.9806;RSQ=0.9706;ERATE=0.0022;THETA=0.0062;AC=1465;AN=2184 GT:DS:GL:BD 0.67078757 1
1 79259435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0173;AVGPOST=0.9975;RSQ=0.9491;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79259546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0157;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79259547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79259568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8954;ERATE=0.0003;THETA=0.0021;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79259575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0036;AVGPOST=0.9987;RSQ=0.8591;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79259576 . C CA 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6491;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79259603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4969;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79259632 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79259813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2894;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0004;THETA=0.0007;AC=630;AN=2184 GT:DS:GL:BD 0.28846154 0
1 79259815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79260119 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79260260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79260266 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9239;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79260446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79260475 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79260522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7451;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79260524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0210;AVGPOST=0.9990;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 79260536 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79260654 . CT C 188 PASS INDEL;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6844;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79260673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.7139;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79260714 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1077;AVGPOST=0.9986;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 79260752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0050;AVGPOST=0.9977;RSQ=0.8208;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79260812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1390;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 79260852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0173;AVGPOST=0.9990;RSQ=0.9776;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79260864 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0059;AVGPOST=0.9976;RSQ=0.8295;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79260952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1081;AVGPOST=0.9976;RSQ=0.9918;ERATE=0.0005;THETA=0.0004;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 79261045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6915;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79261046 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0145;AVGPOST=0.9984;RSQ=0.9485;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79261094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0057;AVGPOST=0.9935;RSQ=0.5760;ERATE=0.0010;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79261111 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.9233;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79261249 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1061;AVGPOST=0.9987;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 79261319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9310;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79261407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79261448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7515;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79261633 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8551;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79261667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1886;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0005;THETA=0.0002;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 79261686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1926;AVGPOST=0.9989;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=420;AN=2184 GT:DS:GL:BD 0.19230770 0
1 79261728 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7736;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79261781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79261829 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.8633;AVGPOST=0.9971;RSQ=0.9893;ERATE=0.0004;THETA=0.0006;AC=1886;AN=2184 GT:DS:GL:BD 0.86355311 1
1 79261856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0499;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0006;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 79261896 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6047;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79261943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5309;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79262010 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1891;AVGPOST=0.9979;RSQ=0.9949;ERATE=0.0006;THETA=0.0002;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 79262112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0007;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 79262432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1093;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 79262443 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5636;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79262462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79262552 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79262553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1088;AVGPOST=0.9987;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=239;AN=2184 GT:DS:GL:BD 0.10943224 0
1 79262675 . T TC 882 PASS INDEL;BAVGPOST=0.988;BRSQ=0.694;LDAF=0.0236;AVGPOST=0.9823;RSQ=0.6993;ERATE=0.0028;THETA=0.0020;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79262678 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.972;LDAF=0.1998;AVGPOST=0.9880;RSQ=0.9719;ERATE=0.0017;THETA=0.0003;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 79262684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0213;AVGPOST=0.9994;RSQ=0.9874;ERATE=0.0003;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 79262687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0285;AVGPOST=0.9988;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 79262697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0031;AVGPOST=0.9989;RSQ=0.8344;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79262706 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6402;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79262717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79262766 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7532;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79262813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79262938 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0072;AVGPOST=0.9986;RSQ=0.9126;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79262940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6712;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79263095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0296;AVGPOST=0.9991;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 79263122 rs57423507 GCCACCACAC G 4710 PASS INDEL;BAVGPOST=0.993;BRSQ=0.842;LDAF=0.0223;AVGPOST=0.9955;RSQ=0.9286;ERATE=0.0003;THETA=0.0012;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79263164 . G GAC 26367 PASS INDEL;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1869;AVGPOST=0.9964;RSQ=0.9912;ERATE=0.0003;THETA=0.0005;AC=408;AN=2184 GT:DS:GL:BD 0.18681319 0
1 79263271 . T TAA 27160 PASS INDEL;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1869;AVGPOST=0.9944;RSQ=0.9871;ERATE=0.0005;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 79263273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0124;AVGPOST=0.9989;RSQ=0.9631;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79263365 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8399;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79263376 . G GT 194 PASS INDEL;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0036;AVGPOST=0.9963;RSQ=0.5958;ERATE=0.0008;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79263446 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8081;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79263447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5073;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79263499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2566;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=559;AN=2184 GT:DS:GL:BD 0.25595239 0
1 79263644 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0026;AVGPOST=0.9980;RSQ=0.6781;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79263773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6733;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79263785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79263934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5715;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79264013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0235;AVGPOST=0.9968;RSQ=0.9551;ERATE=0.0003;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 79264100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.919;LDAF=0.0143;AVGPOST=0.9962;RSQ=0.9008;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79264239 MERGED_DEL_2_3748 GGTACCTGTAGTCCCATCTATTTGGGCGGCTGAAGCAAAAGGATCACTTGAACACGGGAGGTTGAGGCTGCAGTGAGCCATGACCATACCACTGCACTCCAACATGGGTGACAGAGTGAGACCTTATCTCAAAATAAATAAATAAATAAGTCTGAGCAAAAATAATTATGTTTAGATTGAATCTGTCTTA G . . SV;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9370;ERATE=0.0003;THETA=0.0003;CIEND=-70;83;CIPOS=-93;64;END=62452416;HOMLEN=2;HOMSEQ=GT;SOURCE=BreakDancer_62437534_62452424;EM GT:DS:GL:BD 0.00320513 0
1 79264246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79264273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79264403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7986;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79264577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2169;AVGPOST=0.9960;RSQ=0.9923;ERATE=0.0004;THETA=0.0010;AC=471;AN=2184 GT:DS:GL:BD 0.21565934 0
1 79264587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9328;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79264674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79264741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0439;AVGPOST=0.9998;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 79264821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0044;AVGPOST=0.9987;RSQ=0.9017;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79264900 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5368;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0005;THETA=0.0005;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 79264932 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0535;AVGPOST=0.9990;RSQ=0.9926;ERATE=0.0004;THETA=0.0001;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 79264974 rs10532595 AG A 925 PASS INDEL;BAVGPOST=0.964;BRSQ=0.663;LDAF=0.0649;AVGPOST=0.9543;RSQ=0.7359;ERATE=0.0019;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 79265011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79265062 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5353;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0007;THETA=0.0004;AC=1169;AN=2184 GT:DS:GL:BD 0.53525639 1
1 79265137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0047;AVGPOST=0.9981;RSQ=0.8471;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79265216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9999;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0003;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 79265277 . GC G 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5025;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79265293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1077;AVGPOST=0.9991;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 79265337 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7765;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79265356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0058;AVGPOST=0.9994;RSQ=0.9613;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79265436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0085;AVGPOST=0.9979;RSQ=0.8959;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79265472 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79265599 rs11341152 AC A 42958 PASS INDEL;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.3386;AVGPOST=0.9840;RSQ=0.9741;ERATE=0.0050;THETA=0.0003;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 79265603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79265839 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79265847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7265;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79265866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1509;AVGPOST=0.9983;RSQ=0.9950;ERATE=0.0003;THETA=0.0004;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 79265870 . C CT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4157;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79265884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79265919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79266167 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9686;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79266197 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7257;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79266202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79266223 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79266303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8608;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79266462 rs56250502 TC T 5941 PASS INDEL;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0553;AVGPOST=0.9989;RSQ=0.9902;ERATE=0.0003;THETA=0.0001;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 79266484 rs60880218 GGAGGT G 5429 PASS INDEL;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0595;AVGPOST=0.9973;RSQ=0.9849;ERATE=0.0004;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 79266546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6627;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79266603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.7536;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79266644 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0878;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 79266696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79266736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9148;ERATE=0.0003;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79266761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5266;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79266815 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79266822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79266924 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1088;AVGPOST=0.9990;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 79266946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9676;ERATE=0.0005;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79266957 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5766;AVGPOST=0.9978;RSQ=0.9963;ERATE=0.0008;THETA=0.0002;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 79266971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7164;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79266980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0071;AVGPOST=0.9984;RSQ=0.9098;ERATE=0.0006;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79267006 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7597;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79267007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79267023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8326;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79267038 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79267157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0053;AVGPOST=0.9973;RSQ=0.8137;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79267174 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5769;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0006;THETA=0.0002;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 79267249 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5763;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 79267303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8418;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79267375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79267380 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79267383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79267508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79267515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4999;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79267570 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1056;AVGPOST=0.9987;RSQ=0.9944;ERATE=0.0004;THETA=0.0002;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 79267584 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0456;AVGPOST=0.9992;RSQ=0.9927;ERATE=0.0004;THETA=0.0001;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 79267739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3428;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 79267786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79267789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79267828 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1115;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 79267863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79267882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5764;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0004;THETA=0.0002;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 79267948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0064;AVGPOST=1.0000;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79267954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5794;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79268025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7073;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79268055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1052;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 79268180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0067;AVGPOST=0.9993;RSQ=0.9588;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79268278 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9766;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79268369 rs76541705 AT A 21236 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2747;AVGPOST=0.9935;RSQ=0.9886;ERATE=0.0010;THETA=0.0003;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 79268388 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0888;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 79268687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1053;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 79268764 . AC A 2805 PASS INDEL;BAVGPOST=0.989;BRSQ=0.951;LDAF=0.0996;AVGPOST=0.9943;RSQ=0.9780;ERATE=0.0004;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 79268799 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.952;LDAF=0.0994;AVGPOST=0.9940;RSQ=0.9770;ERATE=0.0006;THETA=0.0002;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 79268801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79268840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5764;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0007;THETA=0.0002;AC=1259;AN=2184 GT:DS:GL:BD 0.57646519 1
1 79268858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0455;AVGPOST=0.9993;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 79268965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9387;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79269128 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79269235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8266;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79269257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0454;AVGPOST=0.9995;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 79269337 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0990;AVGPOST=0.9981;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 79269560 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0876;AVGPOST=0.9987;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 79269576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2716;AVGPOST=0.9967;RSQ=0.9949;ERATE=0.0004;THETA=0.0002;AC=590;AN=2184 GT:DS:GL:BD 0.27014652 0
1 79269588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6389;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79269617 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8386;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0005;THETA=0.0002;AC=1831;AN=2184 GT:DS:GL:BD 0.83836997 1
1 79269691 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.8387;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=1831;AN=2184 GT:DS:GL:BD 0.83836997 1
1 79269743 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7129;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=1555;AN=2184 GT:DS:GL:BD 0.71199632 1
1 79269763 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4922;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79269790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79269799 . A AG 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5389;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79269828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79269896 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3810;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=831;AN=2184 GT:DS:GL:BD 0.38049451 0
1 79269980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1360;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 79270095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79270161 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79270235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79270265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1851;AVGPOST=0.9965;RSQ=0.9910;ERATE=0.0004;THETA=0.0002;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 79270368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1358;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 79270551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79270614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3815;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0006;THETA=0.0006;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 79270674 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8386;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0004;THETA=0.0011;AC=1831;AN=2184 GT:DS:GL:BD 0.83836997 1
1 79270846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79270884 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9569;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79270908 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3801;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 79270958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8557;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79270965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1360;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 79270974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79270996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1358;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 79271048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1825;AVGPOST=0.9978;RSQ=0.9951;ERATE=0.0003;THETA=0.0027;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 79271309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79271376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79271540 . A AG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79271580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6347;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79271757 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6394;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79271836 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1362;AVGPOST=0.9978;RSQ=0.9928;ERATE=0.0004;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 79271897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1356;AVGPOST=0.9988;RSQ=0.9957;ERATE=0.0004;THETA=0.0022;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 79271916 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9434;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79271934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7294;ERATE=0.0009;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79271955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79272064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1609;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 79272068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5254;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79272091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8671;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79272279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.952;LDAF=0.4540;AVGPOST=0.9648;RSQ=0.9548;ERATE=0.0003;THETA=0.0004;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 79272281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.952;LDAF=0.4531;AVGPOST=0.9632;RSQ=0.9525;ERATE=0.0012;THETA=0.0011;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 79272282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1358;AVGPOST=0.9978;RSQ=0.9926;ERATE=0.0005;THETA=0.0008;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 79272325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1355;AVGPOST=0.9986;RSQ=0.9947;ERATE=0.0005;THETA=0.0011;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 79272383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.7764;ERATE=0.0005;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79272482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.708;LDAF=0.0034;AVGPOST=0.9965;RSQ=0.5394;ERATE=0.0006;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79272554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3513;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79272555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0161;AVGPOST=0.9971;RSQ=0.9261;ERATE=0.0008;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79272633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1822;AVGPOST=0.9971;RSQ=0.9939;ERATE=0.0004;THETA=0.0042;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 79272762 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6123;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79272952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0775;AVGPOST=0.9879;RSQ=0.9328;ERATE=0.0005;THETA=0.0009;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 79273018 rs74797079 TA T 32 PASS INDEL;BAVGPOST=0.982;BRSQ=0.290;LDAF=0.0213;AVGPOST=0.9690;RSQ=0.3923;ERATE=0.0043;THETA=0.0014;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79273167 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2997;AVGPOST=0.9961;RSQ=0.9939;ERATE=0.0005;THETA=0.0042;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 79273243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6538;ERATE=0.0006;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79273317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79273348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6045;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79273453 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3051;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0003;THETA=0.0011;AC=667;AN=2184 GT:DS:GL:BD 0.30540293 0
1 79273488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3051;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0005;THETA=0.0152;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 79273524 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2951;AVGPOST=0.9966;RSQ=0.9943;ERATE=0.0003;THETA=0.0055;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 79273557 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79273590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.2928;AVGPOST=0.9926;RSQ=0.9885;ERATE=0.0005;THETA=0.0254;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 79273596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0165;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79273626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.972;LDAF=0.2829;AVGPOST=0.9846;RSQ=0.9756;ERATE=0.0026;THETA=0.0038;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 79273733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9644;ERATE=0.0003;THETA=0.0064;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79273752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.984;LDAF=0.4132;AVGPOST=0.9814;RSQ=0.9767;ERATE=0.0016;THETA=0.0107;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 79273781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79273792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8452;ERATE=0.0004;THETA=0.0050;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79273828 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.981;LDAF=0.4012;AVGPOST=0.9837;RSQ=0.9782;ERATE=0.0010;THETA=0.0335;AC=881;AN=2184 GT:DS:GL:BD 0.40338829 0
1 79273831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79273926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0147;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79273975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0244;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79274040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.899;LDAF=0.0038;AVGPOST=0.9993;RSQ=0.9217;ERATE=0.0003;THETA=0.0065;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79274094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9609;ERATE=0.0003;THETA=0.0132;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79274336 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0073;AVGPOST=0.9992;RSQ=0.9563;ERATE=0.0003;THETA=0.0067;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79274346 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0372;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79274605 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9725;ERATE=0.0003;THETA=0.0113;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79274642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0417;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0018;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 79274798 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.904;LDAF=0.0131;AVGPOST=0.9953;RSQ=0.8696;ERATE=0.0005;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79274841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5742;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79274845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.959;LDAF=0.1166;AVGPOST=0.9838;RSQ=0.9466;ERATE=0.0010;THETA=0.0005;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 79275243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.130;LDAF=0.0457;AVGPOST=0.9512;RSQ=0.5873;ERATE=0.0020;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 79275309 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.3734;AVGPOST=0.9929;RSQ=0.9905;ERATE=0.0010;THETA=0.0005;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 79275609 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3725;AVGPOST=0.9907;RSQ=0.9885;ERATE=0.0012;THETA=0.0004;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 79275610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.964;LDAF=0.1115;AVGPOST=0.9930;RSQ=0.9738;ERATE=0.0010;THETA=0.0003;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 79275683 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.3640;AVGPOST=0.9941;RSQ=0.9921;ERATE=0.0008;THETA=0.0010;AC=794;AN=2184 GT:DS:GL:BD 0.36355311 0
1 79275696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.555;LDAF=0.0039;AVGPOST=0.9964;RSQ=0.6443;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79275723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9762;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79275781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.953;LDAF=0.3631;AVGPOST=0.9821;RSQ=0.9769;ERATE=0.0012;THETA=0.0004;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 79275914 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2046;AVGPOST=0.9963;RSQ=0.9925;ERATE=0.0007;THETA=0.0005;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 79276034 . A AG 99 PASS INDEL;BAVGPOST=0.995;BRSQ=0.387;LDAF=0.0158;AVGPOST=0.9819;RSQ=0.5093;ERATE=0.0015;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79276119 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9666;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79276123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1508;AVGPOST=0.9985;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 79276140 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.945;LDAF=0.0145;AVGPOST=0.9977;RSQ=0.9419;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79276162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2176;AVGPOST=0.9937;RSQ=0.9882;ERATE=0.0011;THETA=0.0006;AC=473;AN=2184 GT:DS:GL:BD 0.21657509 0
1 79276198 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2141;AVGPOST=0.9966;RSQ=0.9934;ERATE=0.0005;THETA=0.0003;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 79276358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.2148;AVGPOST=0.9963;RSQ=0.9924;ERATE=0.0009;THETA=0.0004;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 79276457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.295;LDAF=0.0239;AVGPOST=0.9656;RSQ=0.4442;ERATE=0.0011;THETA=0.0025;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79276496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.848;LDAF=0.0165;AVGPOST=0.9860;RSQ=0.6804;ERATE=0.0011;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79276609 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2165;AVGPOST=0.9891;RSQ=0.9787;ERATE=0.0016;THETA=0.0009;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 79276639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5208;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79276714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.2137;AVGPOST=0.9967;RSQ=0.9936;ERATE=0.0007;THETA=0.0006;AC=468;AN=2184 GT:DS:GL:BD 0.21428572 0
1 79276729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7046;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79276730 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.564;LDAF=0.0083;AVGPOST=0.9901;RSQ=0.5408;ERATE=0.0009;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79276737 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0019;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79276894 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0076;AVGPOST=0.9991;RSQ=0.9582;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79276943 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1374;AVGPOST=0.9992;RSQ=0.9977;ERATE=0.0003;THETA=0.0050;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 79277304 . C CG 548 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9273;ERATE=0.0003;THETA=0.0038;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79277305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79277312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.927;LDAF=0.0393;AVGPOST=0.9926;RSQ=0.9285;ERATE=0.0004;THETA=0.0032;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 79277400 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79277404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.688;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5987;ERATE=0.0006;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79277480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8009;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79277517 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79277553 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79277591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5954;ERATE=0.0004;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79277600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.4482;ERATE=0.0005;THETA=0.0096;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79277683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79277742 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79277815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9256;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79277818 . CTCTCT C 6030 PASS INDEL;BAVGPOST=0.979;BRSQ=0.900;LDAF=0.1091;AVGPOST=0.9686;RSQ=0.8860;ERATE=0.0035;THETA=0.0018;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 79277844 rs71777155 T TC 570 PASS INDEL;BAVGPOST=0.989;BRSQ=0.684;LDAF=0.0230;AVGPOST=0.9760;RSQ=0.5820;ERATE=0.0048;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79277849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9062;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79277971 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79277976 . AAAAT A 112 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79278042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79278177 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4999;ERATE=0.0005;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79278248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79278296 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7901;ERATE=0.0003;THETA=0.0031;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79278437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8172;ERATE=0.0004;THETA=0.0058;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79278520 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4226;AVGPOST=0.9936;RSQ=0.9916;ERATE=0.0006;THETA=0.0003;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 79278530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79278565 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0255;AVGPOST=0.9952;RSQ=0.9281;ERATE=0.0005;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79278596 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0920;AVGPOST=0.9993;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 79278852 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6016;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79278907 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0027;AVGPOST=0.9987;RSQ=0.7858;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79279006 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9017;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79279058 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7494;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79279144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1044;AVGPOST=0.9991;RSQ=0.9961;ERATE=0.0004;THETA=0.0006;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 79279155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79279211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6840;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79279212 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3964;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0004;THETA=0.0008;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 79279329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79279401 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4502;AVGPOST=0.9983;RSQ=0.9975;ERATE=0.0004;THETA=0.0004;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 79279446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9842;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79279455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0166;AVGPOST=0.9979;RSQ=0.9495;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79279554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7917;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79279686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9727;ERATE=0.0004;THETA=0.0016;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79279698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0168;AVGPOST=0.9983;RSQ=0.9616;ERATE=0.0004;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79279768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9891;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79279902 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.657;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79279915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0092;AVGPOST=0.9990;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79279950 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4644;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79280112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.848;LDAF=0.0054;AVGPOST=0.9983;RSQ=0.8852;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79280213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79280328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0364;AVGPOST=0.9992;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 79280336 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0494;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 79280425 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79280430 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8025;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79280433 . CA C 36 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79280536 rs67682835 AGAAATAG A 7648 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0385;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 79280572 . GA G 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4044;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79280586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7516;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79280630 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79280646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6674;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79280694 . AC A 1013 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0076;AVGPOST=0.9965;RSQ=0.8164;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79280746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79281040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7985;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79281109 . A AG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79281315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0386;AVGPOST=0.9994;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 79281369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9393;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79281406 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0357;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 79281418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9245;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79281504 rs57963130 AGTC A 15177 PASS INDEL;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.1574;AVGPOST=0.9964;RSQ=0.9887;ERATE=0.0005;THETA=0.0003;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 79281930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0035;AVGPOST=0.9971;RSQ=0.7525;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79281939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5259;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0005;THETA=0.0007;AC=1149;AN=2184 GT:DS:GL:BD 0.52609891 1
1 79281948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8209;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79282037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6990;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79282087 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79282155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79282494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79282541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0258;AVGPOST=0.9996;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79282542 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79282548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8776;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79282842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7263;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79282888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0418;AVGPOST=0.9992;RSQ=0.9913;ERATE=0.0005;THETA=0.0002;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 79283008 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79283014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79283146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0004;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79283283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0269;AVGPOST=0.9971;RSQ=0.9562;ERATE=0.0004;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 79283284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1721;AVGPOST=0.9986;RSQ=0.9958;ERATE=0.0004;THETA=0.0005;AC=374;AN=2184 GT:DS:GL:BD 0.17124543 0
1 79283313 . ATTATGCTTTAAGT A 215 PASS INDEL;BAVGPOST=0.981;BRSQ=0.043;LDAF=0.0402;AVGPOST=0.9415;RSQ=0.4261;ERATE=0.0030;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 79283361 . GACA G 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0021;AVGPOST=0.9965;RSQ=0.3013;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79283548 . C CCT 95 PASS INDEL;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5376;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79283638 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79283739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.6298;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79283972 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79284104 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0091;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79284157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9600;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79284185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8844;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79284198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8724;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79284245 . A AT 2137 PASS INDEL;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0152;AVGPOST=0.9977;RSQ=0.9395;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79284316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8806;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79284328 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7440;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79284340 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5952;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79284602 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6736;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79284607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79284644 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9823;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79284713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79284723 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79284806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7935;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79284891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79284893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3654;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79285229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79285283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.939;LDAF=0.8675;AVGPOST=0.9681;RSQ=0.8993;ERATE=0.0053;THETA=0.0003;AC=1915;AN=2184 GT:DS:GL:BD 0.87683153 1
1 79285304 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0378;AVGPOST=0.9993;RSQ=0.9925;ERATE=0.0003;THETA=0.0006;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 79285328 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.937;LDAF=0.3537;AVGPOST=0.9690;RSQ=0.9520;ERATE=0.0046;THETA=0.0002;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 79285343 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79285347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0033;AVGPOST=0.9984;RSQ=0.7980;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79285412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7682;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79285423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5767;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79285505 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5822;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79285572 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4758;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79285584 . A AC 12 PASS INDEL;BAVGPOST=0.899;BRSQ=0.065;LDAF=0.1386;AVGPOST=0.7863;RSQ=0.2888;ERATE=0.0110;THETA=0.0004;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 79285945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.9882;AVGPOST=0.9946;RSQ=0.8196;ERATE=0.0010;THETA=0.0006;AC=2163;AN=2184 GT:DS:GL:BD 0.99038464 1
1 79286016 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5418;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79286049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0583;AVGPOST=0.9986;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 79286191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0311;AVGPOST=0.9977;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 79286210 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79286307 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79286387 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0146;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79286414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9716;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79286572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9850;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79286582 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79286674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79286750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0011;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79286856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79286902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0607;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 79286910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79287020 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79287052 . C CTT 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8538;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79287097 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3273;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 79287158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3763;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=823;AN=2184 GT:DS:GL:BD 0.37683150 0
1 79287259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79287314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3133;AVGPOST=0.9992;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 79287342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.587;LDAF=0.0037;AVGPOST=0.9967;RSQ=0.6543;ERATE=0.0013;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79287343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.9059;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79287401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0021;AVGPOST=0.9966;RSQ=0.4583;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79287495 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0083;AVGPOST=0.9975;RSQ=0.8863;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79287655 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8467;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79287998 . T TA 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.572;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9462;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79288018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0772;AVGPOST=0.9981;RSQ=0.9890;ERATE=0.0006;THETA=0.0006;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 79288056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.491;LDAF=0.0042;AVGPOST=0.9944;RSQ=0.4720;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79288146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9950;RSQ=0.7038;ERATE=0.0005;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79288185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.733;LDAF=0.0178;AVGPOST=0.9904;RSQ=0.7859;ERATE=0.0010;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79288188 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0062;AVGPOST=0.9964;RSQ=0.7735;ERATE=0.0006;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79288235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0161;AVGPOST=0.9943;RSQ=0.8611;ERATE=0.0008;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79288269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.848;LDAF=0.0528;AVGPOST=0.9922;RSQ=0.9491;ERATE=0.0007;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 79288278 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.519;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5298;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79288309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.958;LDAF=0.8786;AVGPOST=0.9872;RSQ=0.9514;ERATE=0.0018;THETA=0.0006;AC=1932;AN=2184 GT:DS:GL:BD 0.88461536 1
1 79288325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.6535;ERATE=0.0012;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79288335 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79288411 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79288413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3600;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0016;THETA=0.0003;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 79288426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5324;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79288532 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3128;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0005;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 79288553 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.829;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6428;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79288641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8232;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79288750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5253;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79288751 . AC A 2044 PASS INDEL;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0146;AVGPOST=0.9998;RSQ=0.9846;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79289008 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0023;AVGPOST=0.9976;RSQ=0.5817;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79289106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79289257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7458;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79289261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9799;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79289331 . TAA T 1607 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0108;AVGPOST=0.9986;RSQ=0.9475;ERATE=0.0004;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79289365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9373;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79289374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79289451 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79289467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8904;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79289524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79289561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0051;AVGPOST=0.9987;RSQ=0.8949;ERATE=0.0006;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79289604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79289657 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2708;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 79289681 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0334;AVGPOST=0.9977;RSQ=0.9717;ERATE=0.0003;THETA=0.0007;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 79289853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.969;LDAF=0.0121;AVGPOST=0.9985;RSQ=0.9501;ERATE=0.0004;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79289912 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3290;AVGPOST=0.9970;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 79290073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3364;AVGPOST=0.9943;RSQ=0.9902;ERATE=0.0008;THETA=0.0004;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 79290094 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7808;ERATE=0.0004;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79290123 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79290175 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7432;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0005;THETA=0.0005;AC=1622;AN=2184 GT:DS:GL:BD 0.74267399 1
1 79290185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9481;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79290211 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.9166;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79290385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8084;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79290426 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7390;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79290435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4772;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79290526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79290558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8082;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79290600 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7798;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79290613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.7460;AVGPOST=0.9894;RSQ=0.9784;ERATE=0.0012;THETA=0.0006;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 79290795 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0112;AVGPOST=0.9965;RSQ=0.8849;ERATE=0.0006;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79290798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5693;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79290840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6439;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79290875 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79290886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4873;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79290907 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7515;AVGPOST=0.9963;RSQ=0.9915;ERATE=0.0007;THETA=0.0005;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 79290943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9380;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79291111 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9485;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79291221 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7327;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79291246 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7268;AVGPOST=0.9979;RSQ=0.9957;ERATE=0.0005;THETA=0.0013;AC=1587;AN=2184 GT:DS:GL:BD 0.72664833 1
1 79291280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79291317 . CTG C 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6489;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79291381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8406;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79291439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9992;RSQ=0.9720;ERATE=0.0003;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79291449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79291501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79291503 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7539;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0003;THETA=0.0007;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 79291690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7268;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=1587;AN=2184 GT:DS:GL:BD 0.72664833 1
1 79291837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5754;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79291851 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79291905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7528;AVGPOST=0.9957;RSQ=0.9911;ERATE=0.0008;THETA=0.0004;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 79292076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79292079 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9401;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79292219 rs71907850 CT C 1359 PASS INDEL;BAVGPOST=0.697;BRSQ=0.447;LDAF=0.5910;AVGPOST=0.6889;RSQ=0.4587;ERATE=0.0313;THETA=0.0003;AC=1353;AN=2184 GT:DS:GL:BD 0.61950547 1
1 79292270 . T TC 20698 PASS INDEL;BAVGPOST=0.896;BRSQ=0.793;LDAF=0.6521;AVGPOST=0.8714;RSQ=0.7769;ERATE=0.0229;THETA=0.0005;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 79292273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.839;BRSQ=0.625;LDAF=0.4918;AVGPOST=0.8292;RSQ=0.6240;ERATE=0.0949;THETA=0.0006;AC=1067;AN=2184 GT:DS:GL:BD 0.48855311 0
1 79292274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8708;ERATE=0.0006;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79292314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0062;AVGPOST=0.9988;RSQ=0.9119;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79292411 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9217;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79292508 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7766;ERATE=0.0005;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79292541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.8907;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79292861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7440;AVGPOST=0.9973;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 79292931 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7544;AVGPOST=0.9979;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 79292938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7544;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0005;THETA=0.0003;AC=1648;AN=2184 GT:DS:GL:BD 0.75457877 1
1 79293022 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79293151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79293170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79293206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79293210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79293272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4829;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79293413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7542;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=1647;AN=2184 GT:DS:GL:BD 0.75412089 1
1 79293431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7098;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79293448 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4528;AVGPOST=0.9905;RSQ=0.9852;ERATE=0.0007;THETA=0.0004;AC=988;AN=2184 GT:DS:GL:BD 0.45238096 0
1 79293563 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.4593;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79293566 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7528;AVGPOST=0.9966;RSQ=0.9936;ERATE=0.0005;THETA=0.0032;AC=1646;AN=2184 GT:DS:GL:BD 0.75366300 1
1 79293634 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.772;BRSQ=0.560;LDAF=0.5133;AVGPOST=0.7685;RSQ=0.6169;ERATE=0.0702;THETA=0.0008;AC=1127;AN=2184 GT:DS:GL:BD 0.51602566 1
1 79293725 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.976;LDAF=0.7492;AVGPOST=0.9952;RSQ=0.9898;ERATE=0.0004;THETA=0.0005;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 79293878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0103;AVGPOST=0.9987;RSQ=0.9467;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79293886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.907;LDAF=0.7057;AVGPOST=0.9000;RSQ=0.8296;ERATE=0.0133;THETA=0.0003;AC=1598;AN=2184 GT:DS:GL:BD 0.73168498 1
1 79293906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.902;LDAF=0.7236;AVGPOST=0.9418;RSQ=0.8960;ERATE=0.0047;THETA=0.0005;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 79293924 rs71581170 CA C 44 PASS INDEL;BAVGPOST=0.515;BRSQ=0.027;LDAF=0.1692;AVGPOST=0.8299;RSQ=0.5331;ERATE=0.0030;THETA=0.0004;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 79293938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.4991;ERATE=0.0005;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79293984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.892;LDAF=0.0776;AVGPOST=0.9770;RSQ=0.8828;ERATE=0.0007;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 79294065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.7314;AVGPOST=0.9936;RSQ=0.9878;ERATE=0.0005;THETA=0.0024;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 79294235 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.490;LDAF=0.9823;AVGPOST=0.9878;RSQ=0.7156;ERATE=0.0013;THETA=0.0004;AC=2151;AN=2184 GT:DS:GL:BD 0.98489010 1
1 79294371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.609;LDAF=0.0041;AVGPOST=0.9979;RSQ=0.7719;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79294372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7549;AVGPOST=0.9968;RSQ=0.9940;ERATE=0.0004;THETA=0.0004;AC=1650;AN=2184 GT:DS:GL:BD 0.75549453 1
1 79294412 rs71921097 C CA 1264 PASS INDEL;BAVGPOST=0.966;BRSQ=0.645;LDAF=0.0725;AVGPOST=0.9271;RSQ=0.5666;ERATE=0.0198;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 79294422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3791;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79294455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79294512 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7817;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79294656 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79294690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.8306;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79294767 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7539;AVGPOST=0.9982;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=1646;AN=2184 GT:DS:GL:BD 0.75366300 1
1 79294838 . CCCT C 300 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9375;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79294967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.525;LDAF=0.0207;AVGPOST=0.9768;RSQ=0.5759;ERATE=0.0067;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79294972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7684;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79295027 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0028;AVGPOST=0.9974;RSQ=0.6192;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79295090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0063;AVGPOST=0.9982;RSQ=0.8863;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79295097 . A AT 196 PASS INDEL;BAVGPOST=0.986;BRSQ=0.487;LDAF=0.0247;AVGPOST=0.9659;RSQ=0.4444;ERATE=0.0072;THETA=0.0011;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79295101 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7086;ERATE=0.0007;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79295114 . A AT 414 PASS INDEL;BAVGPOST=0.996;BRSQ=0.866;LDAF=0.0165;AVGPOST=0.9858;RSQ=0.6835;ERATE=0.0012;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79295150 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.850;LDAF=0.1251;AVGPOST=0.9507;RSQ=0.8326;ERATE=0.0117;THETA=0.0012;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 79295151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.874;LDAF=0.0570;AVGPOST=0.9851;RSQ=0.9016;ERATE=0.0033;THETA=0.0006;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 79295162 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5813;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79295208 . TA T 8936 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0630;AVGPOST=0.9941;RSQ=0.9615;ERATE=0.0007;THETA=0.0007;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 79295235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0578;AVGPOST=0.9982;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 79295265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8500;ERATE=0.0003;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79295383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0572;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 79295430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79295455 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79295527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79295550 . C CA 18 PASS INDEL;BAVGPOST=0.998;BRSQ=0.686;LDAF=0.0040;AVGPOST=0.9962;RSQ=0.6187;ERATE=0.0009;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79295634 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5940;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79295692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79295745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.857;LDAF=0.0194;AVGPOST=0.9960;RSQ=0.9095;ERATE=0.0004;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 79295784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79295791 rs59907010 TAGTA T 14849 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0600;AVGPOST=0.9985;RSQ=0.9914;ERATE=0.0005;THETA=0.0005;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 79295994 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6674;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79296029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79296072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9340;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79296084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.8269;AVGPOST=0.9981;RSQ=0.9954;ERATE=0.0004;THETA=0.0004;AC=1805;AN=2184 GT:DS:GL:BD 0.82646519 1
1 79296145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79296216 rs72555910 AGG A 21470 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1378;AVGPOST=0.9978;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 79296291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6343;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0006;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 79296435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9669;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79296450 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0573;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 79296556 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79296658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79296700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5448;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79296771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9078;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79296815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79296817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6250;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0007;THETA=0.0003;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 79296887 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79296919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9536;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79296926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4928;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79296947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0237;AVGPOST=0.9989;RSQ=0.9785;ERATE=0.0004;THETA=0.0010;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 79296970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.485;LDAF=0.0074;AVGPOST=0.9898;RSQ=0.4784;ERATE=0.0017;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79297068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.611;LDAF=0.0028;AVGPOST=0.9964;RSQ=0.4955;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79297073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9430;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79297175 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7596;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79297182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.732;LDAF=0.0192;AVGPOST=0.9845;RSQ=0.6833;ERATE=0.0021;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79297210 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5374;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79297252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0521;AVGPOST=0.9989;RSQ=0.9911;ERATE=0.0003;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 79297400 . GC G 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.717;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79297403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9242;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79297515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7590;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79297608 rs61577212 AT A 11475 PASS INDEL;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0585;AVGPOST=0.9988;RSQ=0.9915;ERATE=0.0004;THETA=0.0009;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 79297709 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79297738 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6249;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 79297955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79298082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0580;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 79298113 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79298240 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79298352 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.1372;ERATE=0.0003;THETA=0.0014;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79298500 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6338;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79298550 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0585;AVGPOST=0.9990;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 79298635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79298667 . A AAAC 119 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6006;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79298689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9288;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79298817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7836;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79298872 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79298903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79298912 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8566;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79298918 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79299066 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6333;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=1382;AN=2184 GT:DS:GL:BD 0.63278389 1
1 79299174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7301;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79299191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79299215 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0097;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79299255 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1272;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 79299286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4782;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79299317 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4733;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79299325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8936;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79299412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6254;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0004;THETA=0.0005;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 79299455 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79299660 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0585;AVGPOST=0.9991;RSQ=0.9948;ERATE=0.0003;THETA=0.0008;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 79299662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79299681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79299694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6250;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 79299720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7913;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79299752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5132;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79299782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4546;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79299792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.8971;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79299793 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.3975;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79299895 . AAAAAT A 328 PASS INDEL;BAVGPOST=0.997;BRSQ=0.772;LDAF=0.0072;AVGPOST=0.9966;RSQ=0.8068;ERATE=0.0006;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79299933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7106;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79300039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.1073;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 79300210 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5244;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79300313 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1076;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0004;THETA=0.0011;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 79300373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1072;AVGPOST=0.9985;RSQ=0.9939;ERATE=0.0006;THETA=0.0011;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 79300534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6959;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79300554 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0108;AVGPOST=0.9976;RSQ=0.9125;ERATE=0.0004;THETA=0.0021;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79300591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1072;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0005;THETA=0.0003;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 79300623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0305;AVGPOST=0.9971;RSQ=0.9667;ERATE=0.0006;THETA=0.0012;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 79300651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.595;LDAF=0.0125;AVGPOST=0.9844;RSQ=0.5199;ERATE=0.0016;THETA=0.0017;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79300770 . CA C 1195 PASS INDEL;BAVGPOST=0.993;BRSQ=0.669;LDAF=0.0114;AVGPOST=0.9948;RSQ=0.8067;ERATE=0.0009;THETA=0.0023;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79301143 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.906;LDAF=0.1019;AVGPOST=0.9849;RSQ=0.9431;ERATE=0.0006;THETA=0.0004;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 79301158 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.909;LDAF=0.0997;AVGPOST=0.9886;RSQ=0.9542;ERATE=0.0005;THETA=0.0004;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 79301160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7601;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79301227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.959;LDAF=0.3190;AVGPOST=0.9697;RSQ=0.9474;ERATE=0.0062;THETA=0.0010;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 79301373 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.1800;AVGPOST=0.9958;RSQ=0.9905;ERATE=0.0008;THETA=0.0020;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 79301467 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1069;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0004;THETA=0.0010;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 79301483 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0251;AVGPOST=0.9983;RSQ=0.9684;ERATE=0.0004;THETA=0.0005;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 79301677 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79301906 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9870;ERATE=0.0004;THETA=0.0011;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79301965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.483;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4490;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79301994 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1063;AVGPOST=0.9983;RSQ=0.9944;ERATE=0.0003;THETA=0.0090;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 79302317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8687;ERATE=0.0003;THETA=0.0049;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79302567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79302726 rs71071399 C CA 92313 PASS INDEL;BAVGPOST=0.986;BRSQ=0.953;LDAF=0.8451;AVGPOST=0.9802;RSQ=0.9426;ERATE=0.0007;THETA=0.0036;AC=1854;AN=2184 GT:DS:GL:BD 0.84890109 1
1 79302755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1873;AVGPOST=0.9930;RSQ=0.9838;ERATE=0.0004;THETA=0.0141;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 79302772 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.891;LDAF=0.0112;AVGPOST=0.9975;RSQ=0.9292;ERATE=0.0003;THETA=0.0056;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79302801 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8067;ERATE=0.0004;THETA=0.0135;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79303003 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79303143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9784;ERATE=0.0003;THETA=0.0045;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79303238 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5340;AVGPOST=0.9926;RSQ=0.9894;ERATE=0.0006;THETA=0.0005;AC=1165;AN=2184 GT:DS:GL:BD 0.53342491 1
1 79303248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0087;AVGPOST=0.9981;RSQ=0.9229;ERATE=0.0005;THETA=0.0045;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79303291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1470;AVGPOST=0.9915;RSQ=0.9745;ERATE=0.0003;THETA=0.0010;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 79303323 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0199;AVGPOST=0.9983;RSQ=0.9605;ERATE=0.0004;THETA=0.0005;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 79303341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3941;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79303447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0828;AVGPOST=0.9987;RSQ=0.9930;ERATE=0.0004;THETA=0.0007;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 79303548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5250;AVGPOST=0.9945;RSQ=0.9915;ERATE=0.0004;THETA=0.0004;AC=1146;AN=2184 GT:DS:GL:BD 0.52472526 1
1 79303603 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0695;AVGPOST=0.9989;RSQ=0.9938;ERATE=0.0003;THETA=0.0034;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 79303688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0139;AVGPOST=0.9979;RSQ=0.9400;ERATE=0.0003;THETA=0.0047;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79303868 . GGA G 52 PASS INDEL;BAVGPOST=0.991;BRSQ=0.578;LDAF=0.0205;AVGPOST=0.9766;RSQ=0.5108;ERATE=0.0071;THETA=0.0061;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79303973 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0277;AVGPOST=0.9981;RSQ=0.9729;ERATE=0.0004;THETA=0.0051;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 79304142 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1081;AVGPOST=0.9971;RSQ=0.9887;ERATE=0.0004;THETA=0.0006;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 79304293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79304297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9133;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79304298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0042;AVGPOST=0.9973;RSQ=0.7573;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79304376 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.5340;AVGPOST=0.9820;RSQ=0.9734;ERATE=0.0029;THETA=0.0003;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 79304438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.969;LDAF=0.5330;AVGPOST=0.9907;RSQ=0.9856;ERATE=0.0006;THETA=0.0005;AC=1166;AN=2184 GT:DS:GL:BD 0.53388280 1
1 79304470 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0416;AVGPOST=0.9973;RSQ=0.9752;ERATE=0.0004;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 79304476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0188;AVGPOST=0.9964;RSQ=0.9366;ERATE=0.0004;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79304483 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.965;LDAF=0.5333;AVGPOST=0.9915;RSQ=0.9870;ERATE=0.0005;THETA=0.0002;AC=1167;AN=2184 GT:DS:GL:BD 0.53434068 1
1 79304486 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.968;LDAF=0.5298;AVGPOST=0.9833;RSQ=0.9748;ERATE=0.0014;THETA=0.0051;AC=1164;AN=2184 GT:DS:GL:BD 0.53296703 1
1 79304490 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.560;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.5153;ERATE=0.0007;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79304631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.968;LDAF=0.5286;AVGPOST=0.9911;RSQ=0.9858;ERATE=0.0013;THETA=0.0004;AC=1157;AN=2184 GT:DS:GL:BD 0.52976191 1
1 79304634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.944;LDAF=0.6274;AVGPOST=0.9793;RSQ=0.9656;ERATE=0.0021;THETA=0.0004;AC=1378;AN=2184 GT:DS:GL:BD 0.63095236 1
1 79304664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0279;AVGPOST=0.9961;RSQ=0.9497;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 79304701 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.838;LDAF=0.0105;AVGPOST=0.9941;RSQ=0.8111;ERATE=0.0003;THETA=0.0041;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79304805 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0031;AVGPOST=0.9967;RSQ=0.5698;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79304820 . AAAAAG A 7129 PASS INDEL;BAVGPOST=0.865;BRSQ=0.650;LDAF=0.2848;AVGPOST=0.8242;RSQ=0.6419;ERATE=0.0530;THETA=0.0010;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 79304867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79304922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0045;AVGPOST=0.9997;RSQ=0.9715;ERATE=0.0003;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79304933 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5356;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0006;THETA=0.0003;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 79305007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79305025 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5356;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0006;THETA=0.0004;AC=1170;AN=2184 GT:DS:GL:BD 0.53571427 1
1 79305047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0055;AVGPOST=0.9978;RSQ=0.8682;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79305112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6415;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79305150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0542;AVGPOST=0.9990;RSQ=0.9920;ERATE=0.0004;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 79305169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3510;AVGPOST=0.9975;RSQ=0.9963;ERATE=0.0004;THETA=0.0009;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 79305264 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3625;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 79305337 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.756;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5903;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79305344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1493;AVGPOST=0.9965;RSQ=0.9903;ERATE=0.0005;THETA=0.0009;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 79305622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79305623 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9769;AVGPOST=0.9973;RSQ=0.9595;ERATE=0.0004;THETA=0.0012;AC=2134;AN=2184 GT:DS:GL:BD 0.97710621 1
1 79305696 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.0191;AVGPOST=0.9979;RSQ=0.9530;ERATE=0.0002;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79305760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0002;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79305776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79305839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79305856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79305972 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5699;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79305975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.463;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5738;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79306116 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79306212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6868;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79306272 . TA T 1341 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0138;AVGPOST=0.9986;RSQ=0.9570;ERATE=0.0004;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79306488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79306669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0526;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0002;THETA=0.0005;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 79306943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0516;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 79306963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0756;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0002;THETA=0.0006;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 79307167 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79307388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7269;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79307481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0540;AVGPOST=0.9987;RSQ=0.9919;ERATE=0.0002;THETA=0.0006;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 79307511 . ATC A 234 PASS INDEL;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9026;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79307530 . AG A 1449 PASS INDEL;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9702;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79307593 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0517;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0002;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 79307643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0517;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0002;THETA=0.0002;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 79307655 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0510;AVGPOST=0.9984;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 79307764 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0940;AVGPOST=0.9992;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 79307793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9966;AVGPOST=0.9996;RSQ=0.9463;ERATE=0.0003;THETA=0.0003;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 79307831 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79307897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0683;AVGPOST=0.9958;RSQ=0.9769;ERATE=0.0002;THETA=0.0006;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 79307929 . TG T 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.764;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5979;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79307944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6952;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79307970 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0148;AVGPOST=0.9989;RSQ=0.9689;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79307985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79308001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0519;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 79308026 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.648;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6086;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79308071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8782;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79308291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9473;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79308307 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4698;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79308313 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6070;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79308314 . A AT 1364 PASS INDEL;BAVGPOST=0.998;BRSQ=0.941;LDAF=0.0213;AVGPOST=0.9941;RSQ=0.8910;ERATE=0.0007;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79308348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9223;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79308362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7333;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79308418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.4559;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79308420 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9580;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79308454 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8576;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79308482 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9567;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79308648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9830;ERATE=0.0003;THETA=0.0001;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79308820 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0523;AVGPOST=0.9984;RSQ=0.9884;ERATE=0.0004;THETA=0.0005;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 79308825 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79308858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3515;AVGPOST=0.9962;RSQ=0.9941;ERATE=0.0008;THETA=0.0004;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 79308876 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1479;AVGPOST=0.9992;RSQ=0.9973;ERATE=0.0004;THETA=0.0004;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 79308894 . C CT 229 PASS INDEL;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0069;AVGPOST=0.9904;RSQ=0.5792;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79309274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0516;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0002;THETA=0.0007;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 79309549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79309550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0518;AVGPOST=0.9993;RSQ=0.9937;ERATE=0.0003;THETA=0.0008;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 79309597 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5916;ERATE=0.0005;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79309619 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79309687 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.5710;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79309740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5681;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79309797 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4222;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79309806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0519;AVGPOST=0.9994;RSQ=0.9944;ERATE=0.0003;THETA=0.0004;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 79309978 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4266;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79310013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79310069 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8780;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79310093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1338;AVGPOST=0.9983;RSQ=0.9936;ERATE=0.0004;THETA=0.0010;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 79310208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4644;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79310262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79310359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79310433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79310487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5396;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79310534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1332;AVGPOST=0.9990;RSQ=0.9967;ERATE=0.0003;THETA=0.0006;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 79310585 rs111621695 G GT 25 PASS INDEL;BAVGPOST=0.991;BRSQ=0.426;LDAF=0.0173;AVGPOST=0.9754;RSQ=0.4513;ERATE=0.0042;THETA=0.0014;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79310629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0034;AVGPOST=0.9983;RSQ=0.7906;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79310670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79310768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9323;AVGPOST=0.9983;RSQ=0.9905;ERATE=0.0006;THETA=0.0007;AC=2037;AN=2184 GT:DS:GL:BD 0.93269229 1
1 79310834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79310951 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.784;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7640;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79311078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0403;AVGPOST=0.9988;RSQ=0.9870;ERATE=0.0003;THETA=0.0013;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 79311433 . AAATATCTT A 334 PASS INDEL;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0041;AVGPOST=0.9968;RSQ=0.6471;ERATE=0.0007;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79311634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79311929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7316;AVGPOST=0.9911;RSQ=0.9858;ERATE=0.0004;THETA=0.0006;AC=1597;AN=2184 GT:DS:GL:BD 0.73122710 1
1 79312083 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.969;LDAF=0.7080;AVGPOST=0.9899;RSQ=0.9854;ERATE=0.0004;THETA=0.0002;AC=1546;AN=2184 GT:DS:GL:BD 0.70787543 1
1 79312085 . A ACT 23941 PASS INDEL;BAVGPOST=0.977;BRSQ=0.956;LDAF=0.6971;AVGPOST=0.9729;RSQ=0.9589;ERATE=0.0021;THETA=0.0012;AC=1535;AN=2184 GT:DS:GL:BD 0.70283884 1
1 79312085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0182;AVGPOST=0.9988;RSQ=0.9713;ERATE=0.0004;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 79312199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7414;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79312207 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.0055;AVGPOST=0.9979;RSQ=0.8500;ERATE=0.0003;THETA=0.0020;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79312226 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5183;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79312244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1278;AVGPOST=0.9985;RSQ=0.9949;ERATE=0.0004;THETA=0.0006;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 79312322 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9328;AVGPOST=0.9982;RSQ=0.9909;ERATE=0.0004;THETA=0.0013;AC=2038;AN=2184 GT:DS:GL:BD 0.93315017 1
1 79312397 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79312456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.776;LDAF=0.0061;AVGPOST=0.9959;RSQ=0.7447;ERATE=0.0005;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79312539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1280;AVGPOST=0.9992;RSQ=0.9970;ERATE=0.0002;THETA=0.0006;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 79312772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.761;LDAF=0.0065;AVGPOST=0.9955;RSQ=0.7167;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79312840 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.7299;AVGPOST=0.9954;RSQ=0.9912;ERATE=0.0008;THETA=0.0008;AC=1596;AN=2184 GT:DS:GL:BD 0.73076922 1
1 79312918 . G GA 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.496;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5997;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79312963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6731;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79313197 rs71669555 C CTT 6083 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0265;AVGPOST=0.9984;RSQ=0.9754;ERATE=0.0004;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 79313275 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79313365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0059;AVGPOST=0.9988;RSQ=0.9149;ERATE=0.0003;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79313520 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79313522 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79313598 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6259;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79313658 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9793;ERATE=0.0003;THETA=0.0020;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79313885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.670;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7450;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79314001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7315;AVGPOST=0.9973;RSQ=0.9951;ERATE=0.0004;THETA=0.0020;AC=1597;AN=2184 GT:DS:GL:BD 0.73122710 1
1 79314010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.925;LDAF=0.0316;AVGPOST=0.9973;RSQ=0.9638;ERATE=0.0005;THETA=0.0006;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 79314070 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0066;AVGPOST=0.9981;RSQ=0.8906;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79314114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9735;ERATE=0.0004;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79314121 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6782;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79314202 . AC A 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7708;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79314447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79314448 . T TTC 18 PASS INDEL;BAVGPOST=0.998;BRSQ=0.318;LDAF=0.0114;AVGPOST=0.9848;RSQ=0.4625;ERATE=0.0016;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79314504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.671;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5179;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79314548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.608;LDAF=0.0019;AVGPOST=0.9965;RSQ=0.2703;ERATE=0.0007;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79314581 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.587;LDAF=0.0102;AVGPOST=0.9940;RSQ=0.7476;ERATE=0.0005;THETA=0.0017;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79314591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0194;AVGPOST=0.9975;RSQ=0.9442;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79314678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.561;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.6361;ERATE=0.0008;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79314723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0237;AVGPOST=0.9970;RSQ=0.9456;ERATE=0.0006;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 79314739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.834;LDAF=0.0750;AVGPOST=0.9782;RSQ=0.8810;ERATE=0.0009;THETA=0.0011;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 79314763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.587;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5588;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79314766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79314782 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9330;AVGPOST=0.9993;RSQ=0.9966;ERATE=0.0002;THETA=0.0018;AC=2037;AN=2184 GT:DS:GL:BD 0.93269229 1
1 79314855 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8904;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79314955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0114;AVGPOST=0.9990;RSQ=0.9634;ERATE=0.0003;THETA=0.0013;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79314979 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9278;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79314984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7451;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79315034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79315204 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6583;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79315246 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0341;AVGPOST=0.9986;RSQ=0.9812;ERATE=0.0003;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 79315358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.828;LDAF=0.0192;AVGPOST=0.9947;RSQ=0.8893;ERATE=0.0005;THETA=0.0009;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 79315466 . AAGG A 107 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6327;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79315502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0655;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0003;THETA=0.0007;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 79315614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9804;ERATE=0.0005;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79315718 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0055;AVGPOST=0.9992;RSQ=0.9444;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79315769 . AG A 311 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79315770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.0104;AVGPOST=0.9943;RSQ=0.7960;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79315806 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0050;AVGPOST=0.9979;RSQ=0.8341;ERATE=0.0002;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79315815 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8599;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79315878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.4728;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79315945 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6860;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79315953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79315979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0031;AVGPOST=0.9970;RSQ=0.5921;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79315996 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7396;AVGPOST=0.9977;RSQ=0.9948;ERATE=0.0004;THETA=0.0007;AC=1617;AN=2184 GT:DS:GL:BD 0.74038464 1
1 79316004 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8420;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79316076 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79316132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7632;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79316210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8615;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79316534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0655;AVGPOST=0.9992;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 79316537 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6983;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79316555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79316604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6030;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79316696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79316704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8996;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79316705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9893;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79316764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0655;AVGPOST=0.9992;RSQ=0.9941;ERATE=0.0003;THETA=0.0009;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 79316783 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8284;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79316866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0034;AVGPOST=0.9981;RSQ=0.8013;ERATE=0.0002;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79316894 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79316900 . TATAG T 3781 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=0.9988;RSQ=0.9723;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79316925 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79316940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79317028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8981;ERATE=0.0002;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79317034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79317074 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79317155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0002;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79317285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0036;AVGPOST=0.9986;RSQ=0.8483;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79317349 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9665;ERATE=0.0002;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79317375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.6930;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79317384 . GC G 30 PASS INDEL;BAVGPOST=0.995;BRSQ=0.151;LDAF=0.0340;AVGPOST=0.9595;RSQ=0.5129;ERATE=0.0024;THETA=0.0008;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79317391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9673;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79317402 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5780;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79317418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8521;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79317500 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0079;AVGPOST=0.9988;RSQ=0.9403;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79317531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.807;LDAF=0.0169;AVGPOST=0.9946;RSQ=0.8688;ERATE=0.0008;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79317803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79317853 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9422;ERATE=0.0003;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79317868 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9981;RSQ=0.8554;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79317883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4640;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79317907 . C CATAAA 11687 PASS INDEL;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0725;AVGPOST=0.9967;RSQ=0.9816;ERATE=0.0005;THETA=0.0005;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 79317990 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0667;AVGPOST=0.9982;RSQ=0.9879;ERATE=0.0005;THETA=0.0006;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 79318064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0114;AVGPOST=0.9991;RSQ=0.9632;ERATE=0.0004;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79318331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4636;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79318333 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 79318401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4557;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79318479 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9210;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79318583 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0041;AVGPOST=0.9994;RSQ=0.9309;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79318587 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0105;AVGPOST=0.9989;RSQ=0.9590;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79318613 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4853;ERATE=0.0006;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79318687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79318897 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0655;AVGPOST=0.9992;RSQ=0.9948;ERATE=0.0003;THETA=0.0008;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 79318911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8429;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79318920 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9678;ERATE=0.0002;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79318970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9654;ERATE=0.0002;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79319023 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8524;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79319104 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79319232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0653;AVGPOST=0.9990;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=142;AN=2184 GT:DS:GL:BD 0.06501832 0
1 79319437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6307;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79319554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0049;AVGPOST=0.9991;RSQ=0.9177;ERATE=0.0004;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79319657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9995;RSQ=0.9877;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79319830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79319990 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0385;AVGPOST=0.9995;RSQ=0.9944;ERATE=0.0005;THETA=0.0015;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 79320083 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79320092 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0381;AVGPOST=0.9996;RSQ=0.9959;ERATE=0.0003;THETA=0.0009;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 79320131 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.674;LDAF=0.0199;AVGPOST=0.9830;RSQ=0.6767;ERATE=0.0020;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79320156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8539;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79320186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6499;ERATE=0.0006;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79320308 rs5775260 G GT 5390 PASS INDEL;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0275;AVGPOST=0.9986;RSQ=0.9808;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79320327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0391;AVGPOST=0.9993;RSQ=0.9938;ERATE=0.0003;THETA=0.0018;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 79320357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79320402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79320456 . AG A 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7962;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79320518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.844;LDAF=0.0075;AVGPOST=0.9946;RSQ=0.7327;ERATE=0.0017;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79320587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0037;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79320638 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79320677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0119;AVGPOST=0.9987;RSQ=0.9525;ERATE=0.0004;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79320687 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6226;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79320797 . GA G 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79320817 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7420;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79320826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2674;AVGPOST=0.9966;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=582;AN=2184 GT:DS:GL:BD 0.26648352 0
1 79320867 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0300;AVGPOST=0.9994;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 79320895 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79320903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9319;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79320906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7536;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79320951 . AG A 224 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7303;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79320955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0167;AVGPOST=0.9963;RSQ=0.9063;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79320958 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8532;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79320963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79321243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0029;AVGPOST=0.9976;RSQ=0.6854;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79321289 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8531;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79321344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.638;LDAF=0.0206;AVGPOST=0.9781;RSQ=0.5957;ERATE=0.0056;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79321348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0289;AVGPOST=0.9986;RSQ=0.9808;ERATE=0.0003;THETA=0.0019;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 79321382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79321398 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79321404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79321432 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0063;AVGPOST=0.9990;RSQ=0.9387;ERATE=0.0004;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79321526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.878;LDAF=0.0273;AVGPOST=0.9927;RSQ=0.8990;ERATE=0.0006;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 79321544 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79321619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5341;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79321627 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79321637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9995;RSQ=0.9875;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79321640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79321670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9546;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79321740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7601;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79321784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79321796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6684;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79321801 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79321802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79321871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9083;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79321915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0358;AVGPOST=0.9985;RSQ=0.9832;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 79321994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0272;AVGPOST=0.9993;RSQ=0.9876;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79322081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4754;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79322088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0021;AVGPOST=0.9980;RSQ=0.6090;ERATE=0.0005;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79322110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6172;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79322188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2578;AVGPOST=0.9982;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 79322190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79322194 . GAAAC G 1675 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0180;AVGPOST=0.9984;RSQ=0.9679;ERATE=0.0003;THETA=0.0006;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 79322231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7861;AVGPOST=0.9978;RSQ=0.9945;ERATE=0.0003;THETA=0.0009;AC=1719;AN=2184 GT:DS:GL:BD 0.78708792 1
1 79322299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0385;AVGPOST=0.9988;RSQ=0.9877;ERATE=0.0003;THETA=0.0007;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 79322315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79322389 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.820;LDAF=0.0056;AVGPOST=0.9985;RSQ=0.9056;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79322405 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79322407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9788;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79322550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7401;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79322570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2614;AVGPOST=0.9951;RSQ=0.9927;ERATE=0.0007;THETA=0.0003;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 79322652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5806;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79322676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6853;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79322717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0300;AVGPOST=0.9994;RSQ=0.9917;ERATE=0.0003;THETA=0.0008;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 79322824 . TC T 251 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79322929 . AAGTT A 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79322949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0088;AVGPOST=0.9996;RSQ=0.9800;ERATE=0.0005;THETA=0.0013;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79322988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7676;AVGPOST=0.9972;RSQ=0.9928;ERATE=0.0007;THETA=0.0003;AC=1679;AN=2184 GT:DS:GL:BD 0.76877290 1
1 79323068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79323128 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79323150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9736;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79323211 . CAGAG C 2240 PASS INDEL;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0112;AVGPOST=0.9984;RSQ=0.9366;ERATE=0.0010;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79323233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0037;AVGPOST=0.9981;RSQ=0.7954;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79323261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79323274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79323485 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79323560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6225;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79323588 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.903;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9248;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79323595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79323668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79323727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79323766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7994;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79323833 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0626;AVGPOST=0.9989;RSQ=0.9931;ERATE=0.0003;THETA=0.0008;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 79323902 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6906;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79323911 MERGED_DEL_2_4003 C ADELA . . SV;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;CIEND=-17;33;CIPOS=-18;19;END=75192579;SOURCE=GenomeStrip_75180017_75192579;SVTYPE=DEL;AC=1;AN=21 GT:DS:GL:BD 0.00045788 0
1 79323956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7257;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79323979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79324117 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79324136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79324163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79324250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79324264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79324272 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79324273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0091;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79324338 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0672;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 79324340 . CT C 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79324341 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 79324453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79324849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79324850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0054;AVGPOST=0.9987;RSQ=0.9017;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79324930 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.673;LDAF=0.0057;AVGPOST=0.9959;RSQ=0.7273;ERATE=0.0005;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79325028 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4029;AVGPOST=0.9988;RSQ=0.9981;ERATE=0.0004;THETA=0.0003;AC=880;AN=2184 GT:DS:GL:BD 0.40293041 0
1 79325220 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5746;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79325255 . CCA C 728 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8947;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79325286 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7290;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79325335 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7860;ERATE=0.0004;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79325401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1994;AVGPOST=0.9919;RSQ=0.9809;ERATE=0.0011;THETA=0.0006;AC=434;AN=2184 GT:DS:GL:BD 0.19871795 0
1 79325465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.939;LDAF=0.1157;AVGPOST=0.9909;RSQ=0.9701;ERATE=0.0005;THETA=0.0007;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 79325483 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.6910;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79325592 . A AG 663 PASS INDEL;BAVGPOST=0.969;BRSQ=0.597;LDAF=0.0697;AVGPOST=0.9264;RSQ=0.5508;ERATE=0.0100;THETA=0.0042;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 79325614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0021;AVGPOST=0.9978;RSQ=0.5546;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79325645 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0052;AVGPOST=0.9947;RSQ=0.6112;ERATE=0.0007;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79325694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0038;AVGPOST=0.9967;RSQ=0.6443;ERATE=0.0013;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79325699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0660;AVGPOST=0.9984;RSQ=0.9906;ERATE=0.0003;THETA=0.0027;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 79325765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0100;AVGPOST=0.9984;RSQ=0.9523;ERATE=0.0005;THETA=0.0031;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79325799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9987;RSQ=0.8612;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79325852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9985;RSQ=0.9457;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79325889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.8677;AVGPOST=0.9973;RSQ=0.9916;ERATE=0.0005;THETA=0.0003;AC=1894;AN=2184 GT:DS:GL:BD 0.86721611 1
1 79326088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0164;AVGPOST=0.9989;RSQ=0.9768;ERATE=0.0002;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79326171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0075;AVGPOST=0.9978;RSQ=0.8746;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79326255 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7476;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79326431 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0852;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0004;THETA=0.0008;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 79326479 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.9092;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79326481 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0287;AVGPOST=0.9997;RSQ=0.9960;ERATE=0.0002;THETA=0.0004;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 79326505 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0129;AVGPOST=0.9996;RSQ=0.9873;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79326528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9321;ERATE=0.0002;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79326609 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8897;ERATE=0.0002;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79326713 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.2136;AVGPOST=0.9965;RSQ=0.9916;ERATE=0.0008;THETA=0.0004;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 79326752 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79326827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0878;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0002;THETA=0.0005;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 79326839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9137;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79326851 rs56850746 AAATATATATATATATATATATATAT A 21530 PASS INDEL;BAVGPOST=0.706;BRSQ=0.473;LDAF=0.5073;AVGPOST=0.6770;RSQ=0.4735;ERATE=0.0463;THETA=0.0004;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 79327067 rs71588851 T TAGAGAGAGAGAGAGAG 40100 PASS INDEL;BAVGPOST=0.932;BRSQ=0.875;LDAF=0.3256;AVGPOST=0.9751;RSQ=0.9606;ERATE=0.0008;THETA=0.0007;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 79327110 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6681;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79327233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6594;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79327266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1652;AVGPOST=0.9984;RSQ=0.9952;ERATE=0.0004;THETA=0.0009;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 79327303 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79327304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4386;AVGPOST=0.9983;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=960;AN=2184 GT:DS:GL:BD 0.43956044 0
1 79327431 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4394;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=960;AN=2184 GT:DS:GL:BD 0.43956044 0
1 79327458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0853;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 79327479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5242;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=1146;AN=2184 GT:DS:GL:BD 0.52472526 1
1 79327547 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9025;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79327590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.664;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.7663;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79327693 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0854;AVGPOST=0.9990;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 79327698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.682;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4979;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79327738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0033;AVGPOST=0.9979;RSQ=0.7497;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79327771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8224;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79327814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5104;AVGPOST=0.9976;RSQ=0.9970;ERATE=0.0004;THETA=0.0008;AC=1116;AN=2184 GT:DS:GL:BD 0.51098901 1
1 79327832 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8210;ERATE=0.0006;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79327849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0209;AVGPOST=0.9993;RSQ=0.9849;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 79327855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3346;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0004;THETA=0.0006;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 79327948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79328031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5114;AVGPOST=0.9989;RSQ=0.9986;ERATE=0.0005;THETA=0.0007;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 79328102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.984;LDAF=0.0870;AVGPOST=0.9970;RSQ=0.9864;ERATE=0.0006;THETA=0.0004;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 79328173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9728;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79328181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.5782;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79328205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.4839;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79328265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.501;LDAF=0.0027;AVGPOST=0.9972;RSQ=0.6052;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79328266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.951;LDAF=0.0818;AVGPOST=0.9954;RSQ=0.9795;ERATE=0.0005;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 79328352 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1633;AVGPOST=0.9987;RSQ=0.9963;ERATE=0.0004;THETA=0.0004;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 79328489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.8596;AVGPOST=0.9937;RSQ=0.9820;ERATE=0.0005;THETA=0.0003;AC=1881;AN=2184 GT:DS:GL:BD 0.86126375 1
1 79328625 rs34026321 CT C 30481 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4276;AVGPOST=0.9907;RSQ=0.9875;ERATE=0.0017;THETA=0.0003;AC=935;AN=2184 GT:DS:GL:BD 0.42811355 0
1 79328678 . AC A 211 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79328716 . AAGTCAGCC A 18355 PASS INDEL;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0845;AVGPOST=0.9981;RSQ=0.9906;ERATE=0.0007;THETA=0.0003;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 79328832 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4728;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79328899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0843;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=184;AN=2184 GT:DS:GL:BD 0.08424909 0
1 79328942 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2137;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=466;AN=2184 GT:DS:GL:BD 0.21336997 0
1 79329157 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79329178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7751;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79329432 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79329443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0042;AVGPOST=0.9993;RSQ=0.9227;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79329593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0070;AVGPOST=0.9993;RSQ=0.9506;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79329594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3654;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79329598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7425;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79329641 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9771;ERATE=0.0004;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79329661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8696;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79329663 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79329902 . CTAAT C 75 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0047;AVGPOST=0.9949;RSQ=0.5872;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79330037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0155;AVGPOST=0.9990;RSQ=0.9722;ERATE=0.0004;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79330092 . TGAA T 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9493;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79330144 rs34418067 TAAA T 102 PASS INDEL;BAVGPOST=0.999;BRSQ=0.723;LDAF=0.0025;AVGPOST=0.9973;RSQ=0.5915;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79330218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79330359 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79330366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5493;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79330439 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9330;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79330499 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79330543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79330640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8360;AVGPOST=0.9980;RSQ=0.9952;ERATE=0.0004;THETA=0.0003;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 79330655 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6139;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 79330722 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79330745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2212;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0004;THETA=0.0004;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 79330769 . A AC 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5675;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79330852 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79330886 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.900;LDAF=0.0105;AVGPOST=0.9959;RSQ=0.8683;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79331070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8866;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79331116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7151;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79331130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.726;LDAF=0.0343;AVGPOST=0.9869;RSQ=0.8572;ERATE=0.0007;THETA=0.0002;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 79331177 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.8748;ERATE=0.0005;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79331204 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0038;AVGPOST=0.9982;RSQ=0.8006;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79331241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7511;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79331295 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1590;AVGPOST=0.9979;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 79331636 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.716;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6518;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79331772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9994;RSQ=0.8944;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79331828 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9990;RSQ=0.8291;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79331847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6736;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79331909 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7568;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79332007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7541;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79332025 . G GT 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5517;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79332065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0049;AVGPOST=0.9982;RSQ=0.8659;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79332117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2210;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 79332246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79332296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7286;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79332393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79332513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2214;AVGPOST=0.9983;RSQ=0.9960;ERATE=0.0004;THETA=0.0003;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 79332592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2214;AVGPOST=0.9981;RSQ=0.9958;ERATE=0.0005;THETA=0.0007;AC=485;AN=2184 GT:DS:GL:BD 0.22206959 0
1 79332655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79332742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6401;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79332769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79332895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9294;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79332907 rs36061110 T TCA 73312 PASS INDEL;BAVGPOST=0.977;BRSQ=0.964;LDAF=0.5905;AVGPOST=0.9420;RSQ=0.9222;ERATE=0.0235;THETA=0.0004;AC=1298;AN=2184 GT:DS:GL:BD 0.59432232 1
1 79332993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79333072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79333122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79333137 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79333189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79333256 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79333492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9994;RSQ=0.9530;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79333510 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.712;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8891;ERATE=0.0003;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79333522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8003;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79333571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79333579 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9138;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79333658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4885;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79333696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.822;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8531;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79333781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.943;LDAF=0.0115;AVGPOST=0.9983;RSQ=0.9407;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79333810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8367;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0003;THETA=0.0008;AC=1827;AN=2184 GT:DS:GL:BD 0.83653843 1
1 79333866 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79333885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5213;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79334113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0130;AVGPOST=0.9994;RSQ=0.9762;ERATE=0.0003;THETA=0.0014;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79334321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79334397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79334460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79334570 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79334601 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79334647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6359;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79334660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8232;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79334661 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6971;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79334802 . CA C 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5304;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79334839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2725;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 79334895 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9222;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79335012 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6137;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0002;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 79335020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79335358 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6722;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79335430 . T TA 684 PASS INDEL;BAVGPOST=0.942;BRSQ=0.522;LDAF=0.1072;AVGPOST=0.8836;RSQ=0.4998;ERATE=0.0261;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 79335652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.911;LDAF=0.0326;AVGPOST=0.9968;RSQ=0.9602;ERATE=0.0003;THETA=0.0030;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 79335678 . CA C 167 PASS INDEL;BAVGPOST=0.999;BRSQ=0.429;LDAF=0.0146;AVGPOST=0.9746;RSQ=0.3776;ERATE=0.0011;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79335721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0247;AVGPOST=0.9987;RSQ=0.9741;ERATE=0.0004;THETA=0.0011;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 79335990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0649;AVGPOST=0.9963;RSQ=0.9724;ERATE=0.0005;THETA=0.0009;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 79337033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8101;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79337075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.654;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5565;ERATE=0.0008;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79337470 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.5169;ERATE=0.0006;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79337492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.950;LDAF=0.1792;AVGPOST=0.9415;RSQ=0.8541;ERATE=0.0020;THETA=0.0006;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 79337651 . AAAGACACAT A 569 PASS INDEL;BAVGPOST=0.998;BRSQ=0.555;LDAF=0.0119;AVGPOST=0.9837;RSQ=0.4824;ERATE=0.0013;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79338084 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4828;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79338555 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79338557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79338761 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79338780 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79338864 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8814;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79338869 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79338887 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79338971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7679;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79339054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79339142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5348;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79339277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4419;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79339304 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79339311 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4816;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79339388 . GT G 471 PASS INDEL;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8490;ERATE=0.0004;THETA=0.0043;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79339490 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0168;AVGPOST=0.9993;RSQ=0.9835;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79339551 . A AT 492 PASS INDEL;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79339707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79339832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79339918 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7754;ERATE=0.0007;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79339920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.7205;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79339959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8765;AVGPOST=0.9979;RSQ=0.9917;ERATE=0.0003;THETA=0.0006;AC=1913;AN=2184 GT:DS:GL:BD 0.87591577 1
1 79340100 . TTCC T 1122 PASS INDEL;BAVGPOST=0.997;BRSQ=0.774;LDAF=0.0078;AVGPOST=0.9967;RSQ=0.8266;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79340221 . GTTA G 50 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79340265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1437;AVGPOST=0.9987;RSQ=0.9959;ERATE=0.0004;THETA=0.0003;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 79340280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9989;RSQ=0.9486;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79340324 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79340380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9991;RSQ=0.9670;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79340507 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6025;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79340528 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5286;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79340620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9472;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79340735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1647;AVGPOST=0.9973;RSQ=0.9924;ERATE=0.0006;THETA=0.0005;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 79340764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79340827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6198;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79340896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9997;RSQ=0.9865;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79340945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8362;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79341226 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2680;AVGPOST=0.9957;RSQ=0.9912;ERATE=0.0005;THETA=0.0003;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 79341273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79341346 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79341413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8439;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79341430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79341450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79341484 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9993;RSQ=0.9690;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79341488 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8891;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79341557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79341558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79341559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0147;AVGPOST=0.9986;RSQ=0.9625;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79341626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0292;AVGPOST=0.9991;RSQ=0.9866;ERATE=0.0004;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 79341831 . TA T 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79341839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.8037;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79341841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79341949 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8301;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79342016 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9062;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79342026 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9829;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79342089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0263;AVGPOST=0.9993;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 79342093 rs34844977 CAGA C 1790 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9807;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79342222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9992;RSQ=0.9645;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79342251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1438;AVGPOST=0.9993;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 79342304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79342318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79342324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9046;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79342423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.804;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79342463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79342636 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79342646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79342680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79342693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79342713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79342753 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0290;AVGPOST=0.9994;RSQ=0.9894;ERATE=0.0004;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 79342758 . A AC 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5623;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79342797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0256;AVGPOST=0.9986;RSQ=0.9801;ERATE=0.0004;THETA=0.0003;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 79342910 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0050;AVGPOST=0.9999;RSQ=0.9869;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79342926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7222;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79342988 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79343028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79343074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0288;AVGPOST=0.9996;RSQ=0.9930;ERATE=0.0003;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 79343125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5254;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79343129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79343130 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8268;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79343136 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0288;AVGPOST=0.9997;RSQ=0.9954;ERATE=0.0003;THETA=0.0002;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 79343151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0249;AVGPOST=0.9988;RSQ=0.9837;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 79343219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9993;RSQ=0.9582;ERATE=0.0004;THETA=0.0019;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79343303 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0038;AVGPOST=0.9990;RSQ=0.9062;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79343315 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5466;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79343340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79343357 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4539;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0005;THETA=0.0001;AC=991;AN=2184 GT:DS:GL:BD 0.45375457 0
1 79343358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8889;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79343394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8853;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79343532 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9637;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79343554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.9834;AVGPOST=0.9996;RSQ=0.9894;ERATE=0.0003;THETA=0.0005;AC=2148;AN=2184 GT:DS:GL:BD 0.98351645 1
1 79343584 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79343662 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0031;AVGPOST=0.9988;RSQ=0.8476;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79343701 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8420;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79343713 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79343790 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79343808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79343812 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.7038;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79343837 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79343902 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79343905 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1545;AVGPOST=0.9973;RSQ=0.9925;ERATE=0.0004;THETA=0.0002;AC=337;AN=2184 GT:DS:GL:BD 0.15430403 0
1 79343969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8810;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79343993 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0715;AVGPOST=0.9992;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 79344023 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4555;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79344074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79344156 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6034;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79344342 . CAG C 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5513;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79344365 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5592;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79344369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79344405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1544;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0004;THETA=0.0004;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 79344413 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79344498 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0036;AVGPOST=0.9952;RSQ=0.5556;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79344595 . A AGT 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7332;ERATE=0.0004;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79344599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2719;AVGPOST=0.9882;RSQ=0.9786;ERATE=0.0010;THETA=0.0003;AC=588;AN=2184 GT:DS:GL:BD 0.26923078 0
1 79344608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79344771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2678;AVGPOST=0.9953;RSQ=0.9905;ERATE=0.0005;THETA=0.0003;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 79344822 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9993;RSQ=0.9670;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79344876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5068;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79344919 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5706;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79345062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0298;AVGPOST=0.9984;RSQ=0.9801;ERATE=0.0004;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 79345098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79345273 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8774;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79345393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1490;AVGPOST=0.9979;RSQ=0.9940;ERATE=0.0004;THETA=0.0007;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 79345504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.7884;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79345526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79345574 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9982;RSQ=0.8678;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79345617 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5591;AVGPOST=0.9947;RSQ=0.9916;ERATE=0.0007;THETA=0.0004;AC=1220;AN=2184 GT:DS:GL:BD 0.55860806 1
1 79345650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7857;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79345652 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0083;AVGPOST=0.9979;RSQ=0.9001;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79345682 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6139;ERATE=0.0004;THETA=0.0022;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79345760 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79345808 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9036;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79345861 . A AC 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0100;AVGPOST=0.9991;RSQ=0.9600;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79345912 . CTTTTA C 866 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9611;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79345914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7590;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79345940 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7473;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79346051 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.661;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6120;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79346187 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.910;LDAF=0.9853;AVGPOST=0.9982;RSQ=0.9537;ERATE=0.0003;THETA=0.0006;AC=2153;AN=2184 GT:DS:GL:BD 0.98580587 1
1 79346335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0027;AVGPOST=0.9982;RSQ=0.7165;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79346344 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.971;LDAF=0.1183;AVGPOST=0.9660;RSQ=0.8802;ERATE=0.0053;THETA=0.0014;AC=249;AN=2184 GT:DS:GL:BD 0.11401099 0
1 79346365 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.900;LDAF=0.2986;AVGPOST=0.9008;RSQ=0.8241;ERATE=0.0234;THETA=0.0008;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 79346366 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.958;LDAF=0.1374;AVGPOST=0.9877;RSQ=0.9618;ERATE=0.0009;THETA=0.0003;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 79346367 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0085;AVGPOST=0.9975;RSQ=0.8657;ERATE=0.0007;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79346375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0926;AVGPOST=0.9964;RSQ=0.9849;ERATE=0.0003;THETA=0.0008;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 79346397 . ATATC A 38 PASS INDEL;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6720;ERATE=0.0005;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79346413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5000;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79346443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0023;AVGPOST=0.9979;RSQ=0.6573;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79346566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3503;AVGPOST=0.9926;RSQ=0.9880;ERATE=0.0006;THETA=0.0007;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 79346793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.990;LDAF=0.5514;AVGPOST=0.9910;RSQ=0.9877;ERATE=0.0004;THETA=0.0030;AC=1206;AN=2184 GT:DS:GL:BD 0.55219781 1
1 79346800 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79346801 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1438;AVGPOST=0.9958;RSQ=0.9879;ERATE=0.0005;THETA=0.0009;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 79346813 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9988;RSQ=0.9329;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79346917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.940;LDAF=0.2022;AVGPOST=0.9740;RSQ=0.9435;ERATE=0.0026;THETA=0.0006;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 79346994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.614;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5872;ERATE=0.0005;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79347033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.376;LDAF=0.9006;AVGPOST=0.8715;RSQ=0.4337;ERATE=0.0162;THETA=0.0014;AC=2049;AN=2184 GT:DS:GL:BD 0.93818682 1
1 79347072 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.898;BRSQ=0.549;LDAF=0.1331;AVGPOST=0.9309;RSQ=0.7838;ERATE=0.0060;THETA=0.0005;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 79347168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.431;LDAF=0.0044;AVGPOST=0.9939;RSQ=0.4071;ERATE=0.0009;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79347227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8699;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79347418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7300;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79347422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8026;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79347631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8303;ERATE=0.0005;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79347677 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8116;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79347733 . C CT 281 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8629;ERATE=0.0004;THETA=0.0051;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79347770 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.972;LDAF=0.0907;AVGPOST=0.9964;RSQ=0.9830;ERATE=0.0003;THETA=0.0006;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 79347775 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9319;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79347816 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8078;ERATE=0.0002;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79347902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5338;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79347934 . AATGT A 2108 PASS INDEL;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0170;AVGPOST=0.9990;RSQ=0.9762;ERATE=0.0002;THETA=0.0035;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79347955 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8450;ERATE=0.0003;THETA=0.0064;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79348003 . TC T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5756;ERATE=0.0004;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79348104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6966;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79348162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.2697;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79348175 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0061;AVGPOST=0.9991;RSQ=0.9438;ERATE=0.0002;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79348292 . CCTT C 5402 PASS INDEL;BAVGPOST=0.991;BRSQ=0.974;LDAF=0.2011;AVGPOST=0.9956;RSQ=0.9890;ERATE=0.0005;THETA=0.0005;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 79348327 rs66508571 CTTCT C 19471 PASS INDEL;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.2021;AVGPOST=0.9957;RSQ=0.9896;ERATE=0.0003;THETA=0.0086;AC=441;AN=2184 GT:DS:GL:BD 0.20192307 0
1 79348328 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4854;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=1060;AN=2184 GT:DS:GL:BD 0.48534799 0
1 79348691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8401;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79348738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0123;AVGPOST=0.9997;RSQ=0.9897;ERATE=0.0002;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79348836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79348848 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0107;AVGPOST=0.9985;RSQ=0.9534;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79349077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2004;AVGPOST=0.9970;RSQ=0.9923;ERATE=0.0007;THETA=0.0003;AC=437;AN=2184 GT:DS:GL:BD 0.20009157 0
1 79349259 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9107;AVGPOST=0.9984;RSQ=0.9927;ERATE=0.0003;THETA=0.0007;AC=1989;AN=2184 GT:DS:GL:BD 0.91071427 1
1 79349291 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9778;ERATE=0.0002;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79349377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0002;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79349444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4133;AVGPOST=0.9966;RSQ=0.9948;ERATE=0.0004;THETA=0.0005;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 79349456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79349579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79349592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9172;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79349627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0087;AVGPOST=0.9984;RSQ=0.9342;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79349747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0004;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79349748 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0126;AVGPOST=0.9993;RSQ=0.9814;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79349751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0101;AVGPOST=0.9978;RSQ=0.9351;ERATE=0.0002;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79349858 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9643;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79349899 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.7998;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79349903 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4761;AVGPOST=0.9947;RSQ=0.9922;ERATE=0.0006;THETA=0.0001;AC=1041;AN=2184 GT:DS:GL:BD 0.47664836 0
1 79349910 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0101;AVGPOST=0.9985;RSQ=0.9418;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79349927 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79349959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5422;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79349995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.6732;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79350098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0943;AVGPOST=0.9981;RSQ=0.9900;ERATE=0.0006;THETA=0.0003;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 79350129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9737;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79350179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0295;AVGPOST=0.9993;RSQ=0.9899;ERATE=0.0004;THETA=0.0008;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 79350293 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8907;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79350457 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0028;AVGPOST=0.9992;RSQ=0.8751;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79350499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79350541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0022;AVGPOST=0.9969;RSQ=0.4660;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79350614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1388;AVGPOST=0.9983;RSQ=0.9936;ERATE=0.0005;THETA=0.0005;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 79350649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5591;ERATE=0.0007;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79350891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0276;AVGPOST=0.9978;RSQ=0.9723;ERATE=0.0004;THETA=0.0024;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79350914 . AC A 503 PASS INDEL;BAVGPOST=0.841;BRSQ=0.304;LDAF=0.2010;AVGPOST=0.7446;RSQ=0.3364;ERATE=0.0564;THETA=0.0003;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 79351004 . TC T 2620 PASS INDEL;BAVGPOST=0.989;BRSQ=0.955;LDAF=0.1413;AVGPOST=0.9903;RSQ=0.9674;ERATE=0.0010;THETA=0.0005;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 79351163 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8803;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79351235 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0613;AVGPOST=0.9986;RSQ=0.9895;ERATE=0.0004;THETA=0.0005;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 79351274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.920;LDAF=0.1502;AVGPOST=0.9543;RSQ=0.8656;ERATE=0.0129;THETA=0.0004;AC=306;AN=2184 GT:DS:GL:BD 0.14010990 0
1 79351558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.975;LDAF=0.1381;AVGPOST=0.9953;RSQ=0.9860;ERATE=0.0007;THETA=0.0004;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 79351601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8805;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79351618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9009;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79351619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.761;LDAF=0.1229;AVGPOST=0.9689;RSQ=0.8956;ERATE=0.0007;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 79351695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.762;LDAF=0.1185;AVGPOST=0.9616;RSQ=0.8727;ERATE=0.0015;THETA=0.0010;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 79351696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.572;BRSQ=0.118;LDAF=0.7001;AVGPOST=0.6760;RSQ=0.3662;ERATE=0.0248;THETA=0.0005;AC=1698;AN=2184 GT:DS:GL:BD 0.77747256 1
1 79351817 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9847;ERATE=0.0003;THETA=0.0014;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79351943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0003;THETA=0.0015;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79351994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7020;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79352291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9578;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79352303 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0037;AVGPOST=0.9994;RSQ=0.9423;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79352308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9874;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79352415 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9904;ERATE=0.0003;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79352612 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.727;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4262;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79352686 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79352768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8648;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79352872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79352900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5905;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79352953 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79353010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8044;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79353339 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6700;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79353480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.6972;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79353509 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6506;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79353571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9984;RSQ=0.9654;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79353600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0022;AVGPOST=0.9981;RSQ=0.6819;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79353608 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0092;AVGPOST=0.9997;RSQ=0.9872;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79353661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.994;LDAF=0.6476;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=1413;AN=2184 GT:DS:GL:BD 0.64697802 1
1 79353884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0048;AVGPOST=0.9984;RSQ=0.8740;ERATE=0.0005;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79353895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79353944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9236;AVGPOST=0.9990;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=2017;AN=2184 GT:DS:GL:BD 0.92353481 1
1 79353974 . CAT C 4817 PASS INDEL;BAVGPOST=0.968;BRSQ=0.853;LDAF=0.1247;AVGPOST=0.9647;RSQ=0.8884;ERATE=0.0037;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 79354120 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.943;LDAF=0.1411;AVGPOST=0.9909;RSQ=0.9707;ERATE=0.0014;THETA=0.0007;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 79354122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9872;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79354178 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79354204 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3922;ERATE=0.0004;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79354303 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0087;AVGPOST=0.9990;RSQ=0.9523;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79354314 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79354416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79354463 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79354473 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79354621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8481;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79354625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1395;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0004;THETA=0.0063;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 79354654 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6623;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79354714 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0094;AVGPOST=0.9992;RSQ=0.9620;ERATE=0.0006;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79354801 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9476;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79354810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0026;AVGPOST=0.9969;RSQ=0.5913;ERATE=0.0004;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79354814 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6476;AVGPOST=0.9983;RSQ=0.9974;ERATE=0.0003;THETA=0.0008;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 79354826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5826;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79354969 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5854;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79355082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9295;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79355164 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79355359 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79355390 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79355412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0041;AVGPOST=0.9987;RSQ=0.8599;ERATE=0.0007;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79355496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9991;RSQ=0.9479;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79355531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0049;AVGPOST=0.9982;RSQ=0.8568;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79355606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79355621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9893;ERATE=0.0004;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79355688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79355809 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0160;AVGPOST=0.9963;RSQ=0.9131;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79355969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0063;AVGPOST=0.9992;RSQ=0.9417;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79356030 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0166;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79356050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0044;AVGPOST=0.9979;RSQ=0.8095;ERATE=0.0004;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79356201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6068;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79356210 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0125;AVGPOST=0.9996;RSQ=0.9853;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79356283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79356295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5354;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79356307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4360;AVGPOST=0.9937;RSQ=0.9904;ERATE=0.0007;THETA=0.0004;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 79356357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0165;AVGPOST=0.9995;RSQ=0.9868;ERATE=0.0003;THETA=0.0009;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79356358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9991;RSQ=0.9599;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79356416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6614;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79356448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3188;AVGPOST=0.9971;RSQ=0.9944;ERATE=0.0013;THETA=0.0008;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 79356473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79356640 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0169;AVGPOST=0.9992;RSQ=0.9797;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79356659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9559;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79356725 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79356751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0067;AVGPOST=0.9985;RSQ=0.9109;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79356829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9362;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79356904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79356937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8085;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79356944 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79356960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79357034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0054;AVGPOST=0.9969;RSQ=0.7829;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79357190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9628;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79357238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7557;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79357247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79357308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9352;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79357451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79357496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0125;AVGPOST=0.9994;RSQ=0.9789;ERATE=0.0004;THETA=0.0015;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79357497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79357569 . TA T 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4328;ERATE=0.0007;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79357608 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9927;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79357745 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9061;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79357748 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9728;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79357821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5387;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79357874 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0099;AVGPOST=0.9983;RSQ=0.9227;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79358056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6019;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79358140 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7090;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79358168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79358279 . TTAAAA T 183 PASS INDEL;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7556;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79358304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0308;AVGPOST=0.9989;RSQ=0.9861;ERATE=0.0003;THETA=0.0008;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 79358325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9994;RSQ=0.9619;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79358354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79358372 rs112315803 A AG 425 PASS INDEL;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0071;AVGPOST=0.9988;RSQ=0.9313;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79358422 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79358597 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9996;RSQ=0.9728;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79358629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3127;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0004;THETA=0.0012;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 79358728 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6083;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79358736 . A AT 146 PASS INDEL;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0031;AVGPOST=0.9976;RSQ=0.7063;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79358886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.6320;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79358965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2365;AVGPOST=0.9983;RSQ=0.9961;ERATE=0.0005;THETA=0.0008;AC=516;AN=2184 GT:DS:GL:BD 0.23626374 0
1 79359127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0099;AVGPOST=0.9982;RSQ=0.9401;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79359269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9993;RSQ=0.9695;ERATE=0.0004;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79359334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6960;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79359376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7461;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79359392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79359393 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79359490 . T TG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79359595 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0104;AVGPOST=0.9987;RSQ=0.9441;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79359612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79359619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7243;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79359669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8664;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79359718 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79359877 . C CT 607 PASS INDEL;BAVGPOST=0.931;BRSQ=0.512;LDAF=0.1147;AVGPOST=0.8746;RSQ=0.4753;ERATE=0.0410;THETA=0.0010;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 79359930 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0074;AVGPOST=0.9993;RSQ=0.9624;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79359963 . G GA 24 PASS INDEL;BAVGPOST=0.993;BRSQ=0.463;LDAF=0.0133;AVGPOST=0.9834;RSQ=0.5067;ERATE=0.0048;THETA=0.0010;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79360010 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7986;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79360059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0132;AVGPOST=0.9986;RSQ=0.9595;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79360087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79360274 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7243;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79360290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9083;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79360313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2448;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 79360399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0131;AVGPOST=0.9966;RSQ=0.9081;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79360415 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.9981;AVGPOST=0.9991;RSQ=0.7974;ERATE=0.0003;THETA=0.0008;AC=2180;AN=2184 GT:DS:GL:BD 0.99816847 1
1 79360420 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.471;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6987;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79360482 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.681;LDAF=0.1012;AVGPOST=0.9613;RSQ=0.8426;ERATE=0.0017;THETA=0.0008;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 79360681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.842;LDAF=0.2414;AVGPOST=0.9564;RSQ=0.9132;ERATE=0.0015;THETA=0.0006;AC=528;AN=2184 GT:DS:GL:BD 0.24175824 0
1 79360799 . T TC 6 PASS INDEL;BAVGPOST=0.998;BRSQ=0.477;LDAF=0.0036;AVGPOST=0.9962;RSQ=0.6303;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79360865 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5576;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79360878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0585;AVGPOST=0.9963;RSQ=0.9726;ERATE=0.0007;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 79361611 . ATGAT A 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79361717 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0800;AVGPOST=0.9985;RSQ=0.9913;ERATE=0.0004;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 79361743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0800;AVGPOST=0.9988;RSQ=0.9927;ERATE=0.0004;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 79361819 . ATCTC A 139 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0038;AVGPOST=0.9947;RSQ=0.4122;ERATE=0.0011;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79361849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3197;AVGPOST=0.9859;RSQ=0.9761;ERATE=0.0012;THETA=0.0006;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 79362196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2083;AVGPOST=0.9935;RSQ=0.9841;ERATE=0.0004;THETA=0.0003;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 79362453 . ATTC A 171 PASS INDEL;BAVGPOST=1.000;BRSQ=0.647;LDAF=0.0029;AVGPOST=0.9949;RSQ=0.3898;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79362689 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.789;LDAF=0.0314;AVGPOST=0.9817;RSQ=0.8023;ERATE=0.0005;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 79362711 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3437;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79362721 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.583;LDAF=0.0361;AVGPOST=0.9762;RSQ=0.7528;ERATE=0.0010;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 79362921 . G GC 202 PASS INDEL;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0029;AVGPOST=0.9960;RSQ=0.4340;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79363016 . AG A 334 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0092;AVGPOST=0.9989;RSQ=0.9455;ERATE=0.0004;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79363028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7624;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79363042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0072;AVGPOST=0.9986;RSQ=0.9186;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79363052 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7499;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79363090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79363217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0032;AVGPOST=0.9979;RSQ=0.7298;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79363337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.880;LDAF=0.0102;AVGPOST=0.9972;RSQ=0.9123;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79363375 . CTT C 337 PASS INDEL;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0045;AVGPOST=0.9959;RSQ=0.6120;ERATE=0.0011;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79363415 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.3933;ERATE=0.0005;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79363455 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7867;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79363526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79363549 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.737;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8265;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79363557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8163;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79363626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8829;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79363659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.935;BRSQ=0.902;LDAF=0.6043;AVGPOST=0.9548;RSQ=0.9421;ERATE=0.0016;THETA=0.0004;AC=1338;AN=2184 GT:DS:GL:BD 0.61263734 1
1 79364279 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.930;LDAF=0.1882;AVGPOST=0.9837;RSQ=0.9609;ERATE=0.0006;THETA=0.0003;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 79364310 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1067;AVGPOST=0.9944;RSQ=0.9742;ERATE=0.0009;THETA=0.0002;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 79364357 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1075;AVGPOST=0.9961;RSQ=0.9833;ERATE=0.0005;THETA=0.0003;AC=234;AN=2184 GT:DS:GL:BD 0.10714286 0
1 79364888 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0365;AVGPOST=0.9802;RSQ=0.8098;ERATE=0.0014;THETA=0.0008;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 79364903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2571;AVGPOST=0.9973;RSQ=0.9945;ERATE=0.0004;THETA=0.0004;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 79365037 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0524;AVGPOST=0.9960;RSQ=0.9720;ERATE=0.0005;THETA=0.0004;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 79365156 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0052;AVGPOST=0.9971;RSQ=0.7879;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79365253 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1950;AVGPOST=0.9958;RSQ=0.9891;ERATE=0.0005;THETA=0.0005;AC=426;AN=2184 GT:DS:GL:BD 0.19505495 0
1 79365369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1057;AVGPOST=0.9987;RSQ=0.9939;ERATE=0.0004;THETA=0.0003;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 79365390 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0317;AVGPOST=0.9916;RSQ=0.8995;ERATE=0.0009;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 79365621 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0115;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79365676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0221;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79365715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8368;ERATE=0.0012;THETA=0.0285;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79365717 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0120;AVGPOST=0.9984;RSQ=0.9494;ERATE=0.0003;THETA=0.0219;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79365724 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.954;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9764;ERATE=0.0003;THETA=0.0100;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79365739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8254;ERATE=0.0009;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79365755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0052;AVGPOST=0.9986;RSQ=0.8970;ERATE=0.0004;THETA=0.0089;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79365897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0140;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79365915 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0054;AVGPOST=0.9986;RSQ=0.8831;ERATE=0.0008;THETA=0.0313;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79365943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.937;LDAF=0.2472;AVGPOST=0.9719;RSQ=0.9490;ERATE=0.0011;THETA=0.0032;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 79365962 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0006;THETA=0.0085;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79365968 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0004;THETA=0.0043;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79365975 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0161;AVGPOST=0.9998;RSQ=0.9943;ERATE=0.0003;THETA=0.0056;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79366072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.971;LDAF=0.8584;AVGPOST=0.9906;RSQ=0.9742;ERATE=0.0006;THETA=0.0046;AC=1877;AN=2184 GT:DS:GL:BD 0.85943222 1
1 79366077 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79366182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0006;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79366203 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.937;LDAF=0.5436;AVGPOST=0.9634;RSQ=0.9493;ERATE=0.0079;THETA=0.0055;AC=1192;AN=2184 GT:DS:GL:BD 0.54578757 1
1 79366212 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79366283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0145;AVGPOST=0.9995;RSQ=0.9874;ERATE=0.0003;THETA=0.0086;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79366322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.873;LDAF=0.0080;AVGPOST=0.9980;RSQ=0.9093;ERATE=0.0003;THETA=0.0057;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79366323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7459;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79366325 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.955;LDAF=0.3374;AVGPOST=0.9750;RSQ=0.9650;ERATE=0.0018;THETA=0.0061;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 79366396 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79366536 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0074;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79366579 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79366598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7942;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79366749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6582;ERATE=0.0004;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79366781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79366935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8210;ERATE=0.0004;THETA=0.0022;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79366945 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9351;ERATE=0.0003;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79366965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6947;ERATE=0.0004;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79366993 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79367105 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.831;LDAF=0.0220;AVGPOST=0.9891;RSQ=0.8189;ERATE=0.0039;THETA=0.0046;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79367266 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0186;AVGPOST=0.9980;RSQ=0.9665;ERATE=0.0003;THETA=0.0052;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79367274 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0088;AVGPOST=0.9990;RSQ=0.9583;ERATE=0.0003;THETA=0.0029;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79367789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0090;AVGPOST=0.9988;RSQ=0.9429;ERATE=0.0003;THETA=0.0052;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79367807 . TATAG T 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5464;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79367821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79367976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0699;AVGPOST=0.9984;RSQ=0.9903;ERATE=0.0003;THETA=0.0007;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 79368036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8840;ERATE=0.0004;THETA=0.0017;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79368297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.8698;AVGPOST=0.9951;RSQ=0.9852;ERATE=0.0005;THETA=0.0055;AC=1902;AN=2184 GT:DS:GL:BD 0.87087911 1
1 79368327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79368666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.983;LDAF=0.7453;AVGPOST=0.9899;RSQ=0.9816;ERATE=0.0009;THETA=0.0007;AC=1628;AN=2184 GT:DS:GL:BD 0.74542123 1
1 79368741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9284;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79368755 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1134;AVGPOST=0.9956;RSQ=0.9829;ERATE=0.0004;THETA=0.0011;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 79368760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79368790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79368795 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7632;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79368797 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7008;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79368903 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9999;RSQ=0.9965;ERATE=0.0003;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79368956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79368973 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.9954;AVGPOST=0.9990;RSQ=0.9041;ERATE=0.0005;THETA=0.0003;AC=2175;AN=2184 GT:DS:GL:BD 0.99587911 1
1 79369036 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.972;LDAF=0.0788;AVGPOST=0.9957;RSQ=0.9797;ERATE=0.0003;THETA=0.0007;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 79369120 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.968;LDAF=0.0787;AVGPOST=0.9954;RSQ=0.9778;ERATE=0.0003;THETA=0.0040;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 79369121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.1667;AVGPOST=0.9957;RSQ=0.9897;ERATE=0.0003;THETA=0.0010;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 79369143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79369274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79369314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8388;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79369370 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.7136;AVGPOST=0.9910;RSQ=0.9857;ERATE=0.0004;THETA=0.0012;AC=1557;AN=2184 GT:DS:GL:BD 0.71291208 1
1 79369550 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.853;LDAF=0.0054;AVGPOST=0.9981;RSQ=0.8488;ERATE=0.0004;THETA=0.0024;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79369594 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3903;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79369685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.971;LDAF=0.9726;AVGPOST=0.9963;RSQ=0.9541;ERATE=0.0003;THETA=0.0028;AC=2128;AN=2184 GT:DS:GL:BD 0.97435898 1
1 79369740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79369755 . C CT 255 PASS INDEL;BAVGPOST=0.933;BRSQ=0.544;LDAF=0.0739;AVGPOST=0.9499;RSQ=0.7433;ERATE=0.0027;THETA=0.0006;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 79369807 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0162;AVGPOST=0.9971;RSQ=0.9368;ERATE=0.0004;THETA=0.0048;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79369820 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.489;LDAF=0.0101;AVGPOST=0.9890;RSQ=0.5320;ERATE=0.0023;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79370004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.668;LDAF=0.0699;AVGPOST=0.9682;RSQ=0.8306;ERATE=0.0009;THETA=0.0016;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 79370037 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.787;LDAF=0.1857;AVGPOST=0.9403;RSQ=0.8692;ERATE=0.0006;THETA=0.0087;AC=398;AN=2184 GT:DS:GL:BD 0.18223444 0
1 79370049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.678;LDAF=0.0114;AVGPOST=0.9912;RSQ=0.7245;ERATE=0.0009;THETA=0.0057;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79370053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.719;LDAF=0.0049;AVGPOST=0.9967;RSQ=0.7284;ERATE=0.0007;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79370059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0976;AVGPOST=0.9909;RSQ=0.9646;ERATE=0.0005;THETA=0.0010;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 79370091 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8537;ERATE=0.0003;THETA=0.0021;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79370151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0086;AVGPOST=0.9984;RSQ=0.9257;ERATE=0.0010;THETA=0.0038;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79370250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79370274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0004;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79370294 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79370344 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9412;ERATE=0.0003;THETA=0.0031;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79370379 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.8524;AVGPOST=0.9949;RSQ=0.9863;ERATE=0.0020;THETA=0.0023;AC=1862;AN=2184 GT:DS:GL:BD 0.85256410 1
1 79370527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79370566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79370616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79370651 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0445;AVGPOST=0.9996;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 79370725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79370794 . AG A 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79370810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2773;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0005;THETA=0.0005;AC=604;AN=2184 GT:DS:GL:BD 0.27655679 0
1 79370896 . C CG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7143;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79370911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79370949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3261;AVGPOST=0.9957;RSQ=0.9932;ERATE=0.0006;THETA=0.0004;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 79370951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7954;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79370996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0361;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 79371013 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0228;AVGPOST=0.9990;RSQ=0.9818;ERATE=0.0003;THETA=0.0020;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79371111 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0368;AVGPOST=0.9981;RSQ=0.9799;ERATE=0.0005;THETA=0.0029;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 79371161 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9519;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79371182 rs72508964 C CT 14504 PASS INDEL;BAVGPOST=0.990;BRSQ=0.963;LDAF=0.1480;AVGPOST=0.9946;RSQ=0.9833;ERATE=0.0005;THETA=0.0003;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 79371309 . T TC 551 PASS INDEL;BAVGPOST=0.943;BRSQ=0.726;LDAF=0.1202;AVGPOST=0.9617;RSQ=0.8758;ERATE=0.0006;THETA=0.0012;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 79371314 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8326;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79371401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.7001;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79371450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79371457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6991;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79371529 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.6485;AVGPOST=0.9785;RSQ=0.9650;ERATE=0.0117;THETA=0.0005;AC=1422;AN=2184 GT:DS:GL:BD 0.65109891 1
1 79371563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8454;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79371672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0327;AVGPOST=0.9992;RSQ=0.9890;ERATE=0.0003;THETA=0.0003;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 79371718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0129;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79371879 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9449;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79371901 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5670;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79371905 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3291;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 79371969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0026;AVGPOST=0.9981;RSQ=0.7240;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79371987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0448;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0008;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 79372090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6334;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79372096 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79372174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79372213 . T TG 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79372247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3240;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0006;THETA=0.0002;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 79372262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9999;RSQ=0.9982;ERATE=0.0003;THETA=0.0006;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 79372266 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79372326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8318;ERATE=0.0009;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79372344 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6409;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79372381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9335;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79372395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3234;AVGPOST=0.9983;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 79372409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4955;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79372620 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0028;AVGPOST=0.9997;RSQ=0.9456;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79372667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5391;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79372716 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9482;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79372731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79372737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0054;AVGPOST=0.9967;RSQ=0.7714;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79372802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79372915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79372971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9605;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79373041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1215;AVGPOST=0.9975;RSQ=0.9909;ERATE=0.0004;THETA=0.0004;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 79373101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1450;AVGPOST=0.9968;RSQ=0.9894;ERATE=0.0005;THETA=0.0002;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 79373115 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79373123 . C CG 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6701;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79373225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9419;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79373317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8844;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79373386 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0370;AVGPOST=0.9988;RSQ=0.9864;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 79373395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6991;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79373411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6981;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79373437 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8084;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79373468 . T TC 127 PASS INDEL;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79373550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79373574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3240;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 79373577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9804;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79373580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79373631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3235;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 79373695 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3648;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0004;THETA=0.0006;AC=798;AN=2184 GT:DS:GL:BD 0.36538461 0
1 79373707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8974;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79373748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79373883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6277;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79373939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9029;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79373969 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79373997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0071;AVGPOST=0.9983;RSQ=0.9021;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79374025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79374046 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5646;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79374079 rs71765857 A ATATATGTATG 35933 PASS INDEL;BAVGPOST=0.936;BRSQ=0.870;LDAF=0.3048;AVGPOST=0.9682;RSQ=0.9438;ERATE=0.0014;THETA=0.0005;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 79374250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0193;AVGPOST=0.9951;RSQ=0.9035;ERATE=0.0006;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79374258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.900;BRSQ=0.703;LDAF=0.2162;AVGPOST=0.8905;RSQ=0.7316;ERATE=0.0227;THETA=0.0004;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 79374260 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0354;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 79374265 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79374423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5176;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79374447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2760;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 79374448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79374712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0024;AVGPOST=0.9972;RSQ=0.6123;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79374798 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6396;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79374811 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8260;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79374848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79374908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0365;AVGPOST=0.9992;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 79375002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0364;AVGPOST=0.9994;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 79375022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9998;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 79375188 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79375211 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9108;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0003;THETA=0.0015;AC=1989;AN=2184 GT:DS:GL:BD 0.91071427 1
1 79375225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.800;LDAF=0.0070;AVGPOST=0.9969;RSQ=0.8271;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79375393 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0388;AVGPOST=0.9989;RSQ=0.9898;ERATE=0.0003;THETA=0.0002;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 79375468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6323;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79375476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.977;LDAF=0.2777;AVGPOST=0.9954;RSQ=0.9912;ERATE=0.0003;THETA=0.0003;AC=605;AN=2184 GT:DS:GL:BD 0.27701464 0
1 79375634 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.970;LDAF=0.3587;AVGPOST=0.9956;RSQ=0.9924;ERATE=0.0006;THETA=0.0007;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 79375636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2754;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=600;AN=2184 GT:DS:GL:BD 0.27472529 0
1 79375662 . C CA 6096 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0385;AVGPOST=0.9982;RSQ=0.9834;ERATE=0.0004;THETA=0.0027;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 79375768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9684;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79375826 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0378;AVGPOST=0.9991;RSQ=0.9902;ERATE=0.0004;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 79375846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6276;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=1371;AN=2184 GT:DS:GL:BD 0.62774724 1
1 79375855 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79375938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9989;RSQ=0.9531;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79375991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7514;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79376111 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0014;AVGPOST=0.9978;RSQ=0.3402;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79376286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5538;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79376288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.489;LDAF=0.0036;AVGPOST=0.9968;RSQ=0.6526;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79376294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0102;AVGPOST=0.9833;RSQ=0.3750;ERATE=0.0016;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79376456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0348;AVGPOST=0.9949;RSQ=0.9484;ERATE=0.0007;THETA=0.0005;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 79376484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0089;AVGPOST=0.9987;RSQ=0.9504;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79376545 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0346;AVGPOST=0.9991;RSQ=0.9884;ERATE=0.0003;THETA=0.0004;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 79376611 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0085;AVGPOST=0.9979;RSQ=0.9140;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79376669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0081;AVGPOST=0.9989;RSQ=0.9354;ERATE=0.0003;THETA=0.0021;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79376713 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0082;AVGPOST=0.9987;RSQ=0.9321;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79376714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.592;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6918;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79376756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0070;AVGPOST=0.9960;RSQ=0.7774;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79376782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8448;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79376887 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9035;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79377012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3578;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 79377158 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0024;AVGPOST=0.9976;RSQ=0.5854;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79377199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9625;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79377517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79377667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.877;LDAF=0.0096;AVGPOST=0.9982;RSQ=0.9300;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79377756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2677;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 79377759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79377777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79378009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2612;AVGPOST=0.9975;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 79378028 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8411;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79378115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7059;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79378118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79378157 . TAA T 597 PASS INDEL;BAVGPOST=0.998;BRSQ=0.812;LDAF=0.0045;AVGPOST=0.9974;RSQ=0.7599;ERATE=0.0007;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79378201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3581;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0005;THETA=0.0006;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 79378210 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79378226 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9131;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79378265 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8190;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79378320 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79378346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79378373 . C CACTTTG 160 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5099;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79378425 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6749;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79378496 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7635;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79378603 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79378617 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.998;LDAF=0.2837;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=619;AN=2184 GT:DS:GL:BD 0.28342491 0
1 79378696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6629;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79378713 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5704;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79378847 rs34496562 TAGTC T 2983 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9823;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79379052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79379163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2593;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0007;AC=565;AN=2184 GT:DS:GL:BD 0.25869963 0
1 79379197 . TAA T 1194 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9391;ERATE=0.0004;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79379253 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9549;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79379299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9681;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79379316 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9100;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79379318 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79379481 . A AT 24 PASS INDEL;BAVGPOST=0.998;BRSQ=0.590;LDAF=0.0075;AVGPOST=0.9901;RSQ=0.5110;ERATE=0.0013;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79379612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3586;AVGPOST=0.9981;RSQ=0.9963;ERATE=0.0006;THETA=0.0003;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 79379634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6492;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79379733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0343;AVGPOST=0.9989;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 79379758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2600;AVGPOST=0.9986;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=566;AN=2184 GT:DS:GL:BD 0.25915751 0
1 79379764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79379789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0013;AVGPOST=0.9981;RSQ=0.3806;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79379914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3238;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 79379951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6763;AVGPOST=0.9958;RSQ=0.9926;ERATE=0.0009;THETA=0.0003;AC=1476;AN=2184 GT:DS:GL:BD 0.67582417 1
1 79380151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.877;LDAF=0.0082;AVGPOST=0.9962;RSQ=0.8291;ERATE=0.0007;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79380241 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79380246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6130;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79380259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0112;AVGPOST=0.9990;RSQ=0.9661;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79380296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6237;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79380330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8146;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79380332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4901;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79380659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2113;AVGPOST=0.9942;RSQ=0.9872;ERATE=0.0004;THETA=0.0004;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 79380721 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79380817 rs34602969 TA T 21711 PASS INDEL;BAVGPOST=0.987;BRSQ=0.975;LDAF=0.4548;AVGPOST=0.9771;RSQ=0.9641;ERATE=0.0057;THETA=0.0003;AC=993;AN=2184 GT:DS:GL:BD 0.45467034 0
1 79380853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8784;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79380894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0101;AVGPOST=0.9961;RSQ=0.8854;ERATE=0.0005;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79381131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0486;AVGPOST=0.9995;RSQ=0.9950;ERATE=0.0004;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 79381144 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0026;AVGPOST=0.9975;RSQ=0.6204;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79381179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79381181 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.6668;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79381403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0016;AVGPOST=0.9988;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79381470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79381540 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8952;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79381719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5608;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79381729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5674;AVGPOST=0.9941;RSQ=0.9919;ERATE=0.0004;THETA=0.0010;AC=1241;AN=2184 GT:DS:GL:BD 0.56822342 1
1 79381735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79381742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5680;AVGPOST=0.9972;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 79381749 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5684;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0006;THETA=0.0005;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 79381973 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5650;AVGPOST=0.9951;RSQ=0.9930;ERATE=0.0016;THETA=0.0003;AC=1237;AN=2184 GT:DS:GL:BD 0.56639194 1
1 79382069 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8365;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79382124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0057;AVGPOST=0.9992;RSQ=0.9357;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79382160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1576;AVGPOST=0.9965;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 79382185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9109;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79382428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0505;AVGPOST=0.9985;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 79382497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0314;AVGPOST=0.9992;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 79382549 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5198;AVGPOST=0.9981;RSQ=0.9971;ERATE=0.0005;THETA=0.0002;AC=1136;AN=2184 GT:DS:GL:BD 0.52014655 1
1 79382568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79382646 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0400;AVGPOST=0.9957;RSQ=0.9587;ERATE=0.0005;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 79382697 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.874;LDAF=0.0145;AVGPOST=0.9949;RSQ=0.8670;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79382721 . T TA 699 PASS INDEL;BAVGPOST=0.988;BRSQ=0.861;LDAF=0.0497;AVGPOST=0.9922;RSQ=0.9421;ERATE=0.0007;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 79382785 . T TTTTA 268 PASS INDEL;BAVGPOST=0.984;BRSQ=0.829;LDAF=0.0566;AVGPOST=0.9722;RSQ=0.8186;ERATE=0.0015;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 79382786 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.743;BRSQ=0.271;LDAF=0.2120;AVGPOST=0.7815;RSQ=0.4984;ERATE=0.0208;THETA=0.0002;AC=331;AN=2184 GT:DS:GL:BD 0.15155677 0
1 79382857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.789;BRSQ=0.155;LDAF=0.1757;AVGPOST=0.7983;RSQ=0.4638;ERATE=0.0132;THETA=0.0006;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 79382873 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.4505;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79383029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.361;LDAF=0.0114;AVGPOST=0.9859;RSQ=0.5192;ERATE=0.0007;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79383034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.982;LDAF=0.1610;AVGPOST=0.9899;RSQ=0.9736;ERATE=0.0012;THETA=0.0004;AC=354;AN=2184 GT:DS:GL:BD 0.16208792 0
1 79383066 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0485;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 79383077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0186;AVGPOST=0.9970;RSQ=0.9352;ERATE=0.0004;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 79383082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.822;LDAF=0.0130;AVGPOST=0.9971;RSQ=0.9110;ERATE=0.0004;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79383251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4584;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=1001;AN=2184 GT:DS:GL:BD 0.45833334 0
1 79383271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8866;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79383436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7702;ERATE=0.0011;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79383510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5200;AVGPOST=0.9972;RSQ=0.9961;ERATE=0.0005;THETA=0.0006;AC=1134;AN=2184 GT:DS:GL:BD 0.51923078 1
1 79383527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4673;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79383529 . C CTTT 465 PASS INDEL;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79383565 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.8985;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79383573 . T TGGTA 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6562;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79383690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0303;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 79383768 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79383919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7051;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79383987 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5581;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79384028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9196;ERATE=0.0003;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79384045 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9358;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79384091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6764;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79384096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7183;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79384163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0003;AVGPOST=0.9997;RSQ=0.6564;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79384166 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0158;AVGPOST=0.9960;RSQ=0.9264;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79384181 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7016;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79384219 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7518;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79384268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0302;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 79384294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79384384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.8021;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79384488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8437;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79384549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7133;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79384574 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79384645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79384840 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5717;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 79384964 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7289;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79385043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6089;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0006;THETA=0.0003;AC=1329;AN=2184 GT:DS:GL:BD 0.60851645 1
1 79385054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8439;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79385132 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79385196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0859;AVGPOST=0.9961;RSQ=0.9802;ERATE=0.0004;THETA=0.0006;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 79385267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8183;ERATE=0.0012;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79385296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9650;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79385299 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0049;AVGPOST=0.9981;RSQ=0.8419;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79385381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0301;AVGPOST=1.0000;RSQ=0.9993;ERATE=0.0003;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 79385540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79385665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79385702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9119;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79385906 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8591;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79385933 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8768;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79385934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7973;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79385974 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8661;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79386055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.897;LDAF=0.0280;AVGPOST=0.9968;RSQ=0.9539;ERATE=0.0004;THETA=0.0003;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 79386074 . CG C 56 PASS INDEL;BAVGPOST=0.999;BRSQ=0.615;LDAF=0.0009;AVGPOST=0.9985;RSQ=0.3937;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79386112 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5855;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79386206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0023;AVGPOST=0.9982;RSQ=0.6778;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79386233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9986;RSQ=0.8919;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79386242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79386281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2814;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0004;THETA=0.0007;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 79386529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1153;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0004;THETA=0.0027;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 79386610 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9376;ERATE=0.0003;THETA=0.0045;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79386660 . A AT 2286 PASS INDEL;BAVGPOST=0.959;BRSQ=0.907;LDAF=0.2202;AVGPOST=0.9540;RSQ=0.9136;ERATE=0.0004;THETA=0.0003;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 79386674 rs35800161 T TC 36519 PASS INDEL;BAVGPOST=0.977;BRSQ=0.958;LDAF=0.2827;AVGPOST=0.9899;RSQ=0.9835;ERATE=0.0004;THETA=0.0003;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 79386676 . C CA 2267 PASS INDEL;BAVGPOST=0.959;BRSQ=0.908;LDAF=0.2252;AVGPOST=0.9575;RSQ=0.9216;ERATE=0.0003;THETA=0.0009;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 79386678 . C CA 2043 PASS INDEL;BAVGPOST=0.951;BRSQ=0.895;LDAF=0.2251;AVGPOST=0.9551;RSQ=0.9165;ERATE=0.0007;THETA=0.0010;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 79386681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6630;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79386742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.693;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5237;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79386845 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8393;ERATE=0.0006;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79386854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0307;AVGPOST=0.9977;RSQ=0.9700;ERATE=0.0003;THETA=0.0005;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 79386931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0026;AVGPOST=0.9986;RSQ=0.7707;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79386954 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7558;ERATE=0.0003;THETA=0.0057;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79387180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.4065;AVGPOST=0.9947;RSQ=0.9919;ERATE=0.0004;THETA=0.0044;AC=889;AN=2184 GT:DS:GL:BD 0.40705130 0
1 79387236 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5906;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79387380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0086;AVGPOST=0.9977;RSQ=0.8950;ERATE=0.0006;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79387433 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9801;AVGPOST=0.9984;RSQ=0.9713;ERATE=0.0004;THETA=0.0018;AC=2140;AN=2184 GT:DS:GL:BD 0.97985345 1
1 79387466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8712;ERATE=0.0003;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79387514 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8081;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79387588 . AAGG A 147 PASS INDEL;BAVGPOST=0.989;BRSQ=0.373;LDAF=0.0179;AVGPOST=0.9779;RSQ=0.5066;ERATE=0.0018;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79387818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.619;LDAF=0.0631;AVGPOST=0.9332;RSQ=0.5525;ERATE=0.0122;THETA=0.0038;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 79387826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.393;LDAF=0.0046;AVGPOST=0.9928;RSQ=0.3964;ERATE=0.0009;THETA=0.0070;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79387832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.641;LDAF=0.1826;AVGPOST=0.8628;RSQ=0.6383;ERATE=0.0193;THETA=0.0015;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 79387857 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.899;BRSQ=0.630;LDAF=0.1854;AVGPOST=0.8447;RSQ=0.5907;ERATE=0.0173;THETA=0.0008;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 79387861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.926;BRSQ=0.722;LDAF=0.1824;AVGPOST=0.8617;RSQ=0.6454;ERATE=0.0190;THETA=0.0015;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 79387865 . AAG A 123 PASS INDEL;BAVGPOST=0.989;BRSQ=0.548;LDAF=0.0291;AVGPOST=0.9642;RSQ=0.5340;ERATE=0.0028;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79387911 . AGAAAG A 23085 PASS INDEL;BAVGPOST=0.904;BRSQ=0.797;LDAF=0.2426;AVGPOST=0.9378;RSQ=0.8916;ERATE=0.0059;THETA=0.0001;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 79387936 . A AG 2665 PASS INDEL;BAVGPOST=0.875;BRSQ=0.572;LDAF=0.1515;AVGPOST=0.8794;RSQ=0.6542;ERATE=0.0136;THETA=0.0024;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 79387968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.495;LDAF=0.0414;AVGPOST=0.9619;RSQ=0.6312;ERATE=0.0014;THETA=0.0008;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 79387969 . G GAGAA 2286 PASS INDEL;BAVGPOST=0.975;BRSQ=0.634;LDAF=0.0418;AVGPOST=0.9595;RSQ=0.6091;ERATE=0.0043;THETA=0.0054;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 79387987 . AAAG A 199 PASS INDEL;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0090;AVGPOST=0.9912;RSQ=0.6118;ERATE=0.0010;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79387998 . GAAGA G 4247 PASS INDEL;BAVGPOST=0.977;BRSQ=0.719;LDAF=0.0569;AVGPOST=0.9551;RSQ=0.6714;ERATE=0.0044;THETA=0.0011;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 79388024 . AG A 173 PASS INDEL;BAVGPOST=0.977;BRSQ=0.651;LDAF=0.0369;AVGPOST=0.9746;RSQ=0.7336;ERATE=0.0009;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 79388042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.662;LDAF=0.0197;AVGPOST=0.9871;RSQ=0.7602;ERATE=0.0014;THETA=0.0012;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79388044 rs3059555 A AAAAG 7692 PASS INDEL;BAVGPOST=0.904;BRSQ=0.793;LDAF=0.2508;AVGPOST=0.8946;RSQ=0.8031;ERATE=0.0181;THETA=0.0038;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 79388058 . GAGAA G 100 PASS INDEL;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0124;AVGPOST=0.9980;RSQ=0.9283;ERATE=0.0004;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79388104 . AAGAG A 692 PASS INDEL;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0109;AVGPOST=0.9979;RSQ=0.9285;ERATE=0.0003;THETA=0.0028;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79388112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.672;LDAF=0.0058;AVGPOST=0.9962;RSQ=0.7507;ERATE=0.0005;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79388116 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.3113;AVGPOST=0.9935;RSQ=0.9897;ERATE=0.0009;THETA=0.0016;AC=682;AN=2184 GT:DS:GL:BD 0.31227106 0
1 79388183 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79388204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.977;LDAF=0.8846;AVGPOST=0.9979;RSQ=0.9918;ERATE=0.0005;THETA=0.0008;AC=1933;AN=2184 GT:DS:GL:BD 0.88507324 1
1 79388282 rs59858162 GAGTT G 72882 PASS INDEL;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.5572;AVGPOST=0.9885;RSQ=0.9826;ERATE=0.0022;THETA=0.0013;AC=1219;AN=2184 GT:DS:GL:BD 0.55815017 1
1 79388449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2815;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0005;THETA=0.0008;AC=615;AN=2184 GT:DS:GL:BD 0.28159341 0
1 79388497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0196;AVGPOST=0.9992;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 79388732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0048;AVGPOST=0.9951;RSQ=0.6114;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79388876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79389057 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.610;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6689;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79389160 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.962;LDAF=0.5028;AVGPOST=0.9755;RSQ=0.9641;ERATE=0.0049;THETA=0.0006;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 79389193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6079;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79389214 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5281;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79389223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0038;AVGPOST=0.9961;RSQ=0.6486;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79389257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7761;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79389351 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.665;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.4467;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79389445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9436;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79389601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0085;AVGPOST=0.9994;RSQ=0.9742;ERATE=0.0003;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79389649 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0030;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79389655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79389656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79389659 . AG A 5187 PASS INDEL;BAVGPOST=0.912;BRSQ=0.854;LDAF=0.4704;AVGPOST=0.8848;RSQ=0.8368;ERATE=0.0165;THETA=0.0005;AC=1061;AN=2184 GT:DS:GL:BD 0.48580587 0
1 79389696 rs5775993 GT G 51676 PASS INDEL;BAVGPOST=0.970;BRSQ=0.955;LDAF=0.5569;AVGPOST=0.9847;RSQ=0.9776;ERATE=0.0007;THETA=0.0003;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 79389698 . TG T 7373 PASS INDEL;BAVGPOST=0.919;BRSQ=0.878;LDAF=0.5088;AVGPOST=0.9255;RSQ=0.8986;ERATE=0.0058;THETA=0.0015;AC=1142;AN=2184 GT:DS:GL:BD 0.52289379 1
1 79389701 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.558;LDAF=0.0066;AVGPOST=0.9926;RSQ=0.5711;ERATE=0.0017;THETA=0.0026;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79389962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9806;AVGPOST=0.9995;RSQ=0.9875;ERATE=0.0004;THETA=0.0007;AC=2142;AN=2184 GT:DS:GL:BD 0.98076922 1
1 79390039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.9809;AVGPOST=0.9990;RSQ=0.9806;ERATE=0.0004;THETA=0.0011;AC=2143;AN=2184 GT:DS:GL:BD 0.98122710 1
1 79390097 . T TA 1200 PASS INDEL;BAVGPOST=0.994;BRSQ=0.873;LDAF=0.0161;AVGPOST=0.9956;RSQ=0.8978;ERATE=0.0010;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79390100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79390242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5648;AVGPOST=0.9947;RSQ=0.9919;ERATE=0.0009;THETA=0.0002;AC=1234;AN=2184 GT:DS:GL:BD 0.56501830 1
1 79390247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6999;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79390283 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3063;AVGPOST=0.9956;RSQ=0.9926;ERATE=0.0007;THETA=0.0007;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 79390302 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8041;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79390548 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5695;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0005;THETA=0.0023;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 79390693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5691;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0004;THETA=0.0023;AC=1240;AN=2184 GT:DS:GL:BD 0.56776559 1
1 79390736 . TCA T 9861 PASS INDEL;BAVGPOST=0.969;BRSQ=0.932;LDAF=0.3057;AVGPOST=0.9702;RSQ=0.9497;ERATE=0.0030;THETA=0.0005;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 79390885 rs72199379 CAG C 49897 PASS INDEL;BAVGPOST=0.703;BRSQ=0.560;LDAF=0.6263;AVGPOST=0.7802;RSQ=0.6850;ERATE=0.0121;THETA=0.0004;AC=1337;AN=2184 GT:DS:GL:BD 0.61217946 1
1 79390886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9893;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79390920 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79390934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0176;AVGPOST=0.9955;RSQ=0.8999;ERATE=0.0004;THETA=0.0008;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79390999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3230;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 79391123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8475;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79391187 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79391201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79391372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9830;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79391414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5253;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79391569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3225;AVGPOST=0.9970;RSQ=0.9945;ERATE=0.0004;THETA=0.0002;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 79391614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3227;AVGPOST=0.9958;RSQ=0.9926;ERATE=0.0005;THETA=0.0003;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 79391618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1626;AVGPOST=0.9979;RSQ=0.9943;ERATE=0.0004;THETA=0.0006;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 79391650 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0060;AVGPOST=0.9983;RSQ=0.8893;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79391661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.7015;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79391709 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79391731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79391847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7017;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79391955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79392086 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0215;AVGPOST=0.9998;RSQ=0.9949;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79392182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8324;ERATE=0.0007;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79392185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0087;AVGPOST=0.9975;RSQ=0.9017;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79392190 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79392338 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0037;AVGPOST=0.9952;RSQ=0.5435;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79392362 rs112580898 T TA 44558 PASS INDEL;BAVGPOST=0.982;BRSQ=0.965;LDAF=0.3164;AVGPOST=0.9874;RSQ=0.9803;ERATE=0.0004;THETA=0.0003;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 79392376 . A AG 11365 PASS INDEL;BAVGPOST=0.979;BRSQ=0.960;LDAF=0.3152;AVGPOST=0.9847;RSQ=0.9761;ERATE=0.0009;THETA=0.0005;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 79392377 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79392434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79392474 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3310;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0006;THETA=0.0004;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 79392543 rs5776022 CT C 18756 PASS INDEL;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.3335;AVGPOST=0.9911;RSQ=0.9846;ERATE=0.0009;THETA=0.0004;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 79392678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3305;AVGPOST=0.9965;RSQ=0.9939;ERATE=0.0006;THETA=0.0005;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 79392831 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79392858 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3919;ERATE=0.0006;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79392898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0120;AVGPOST=0.9989;RSQ=0.9670;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79392938 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79392941 . ATTAAC A 302 PASS INDEL;BAVGPOST=0.998;BRSQ=0.745;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.6597;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79392945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79393127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79393143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79393151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79393384 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5946;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79393409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6607;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79393450 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4800;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79393452 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9714;ERATE=0.0004;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79393595 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6143;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79393600 . A AT 10 PASS INDEL;BAVGPOST=0.998;BRSQ=0.605;LDAF=0.0053;AVGPOST=0.9953;RSQ=0.6428;ERATE=0.0009;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79393611 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4321;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79393644 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8839;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79393954 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79393968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79394101 . A AG 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4821;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79394108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7809;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79394260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3303;AVGPOST=0.9967;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=722;AN=2184 GT:DS:GL:BD 0.33058608 0
1 79394300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8938;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79394301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9490;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79394339 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3516;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 79394351 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9539;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79394370 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79394497 . GT G 894 PASS INDEL;BAVGPOST=0.997;BRSQ=0.815;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.8939;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79394533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 79394583 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79394629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79394653 . G GT 1526 PASS INDEL;BAVGPOST=0.996;BRSQ=0.790;LDAF=0.0088;AVGPOST=0.9981;RSQ=0.9072;ERATE=0.0006;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79394872 . AG A 128 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6355;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79394928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3303;AVGPOST=0.9979;RSQ=0.9966;ERATE=0.0005;THETA=0.0003;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 79394971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79394976 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0147;AVGPOST=0.9980;RSQ=0.9443;ERATE=0.0004;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79395017 . AC A 225 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0033;AVGPOST=0.9987;RSQ=0.8329;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79395051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79395097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0021;AVGPOST=0.9973;RSQ=0.5130;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79395129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5980;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79395192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0046;AVGPOST=0.9973;RSQ=0.7678;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79395410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8727;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79395428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3340;AVGPOST=0.9958;RSQ=0.9932;ERATE=0.0010;THETA=0.0007;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 79395446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6657;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79395469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7839;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79395789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1036;AVGPOST=0.9983;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 79395897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79395935 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79396112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0466;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79396120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79396210 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8103;AVGPOST=0.9969;RSQ=0.9906;ERATE=0.0008;THETA=0.0002;AC=1770;AN=2184 GT:DS:GL:BD 0.81043959 1
1 79396214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4737;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79396243 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0032;AVGPOST=0.9994;RSQ=0.9268;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79396325 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79396345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0476;AVGPOST=0.9980;RSQ=0.9859;ERATE=0.0005;THETA=0.0006;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79396509 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0467;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79396636 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0465;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0002;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79396989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0002;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79397023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79397041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6552;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79397091 . T TA 171 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7136;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79397153 . TCTCAAAAA T 8489 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0468;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0004;THETA=0.0007;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79397272 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79397289 . T TG 417 PASS INDEL;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0063;AVGPOST=0.9982;RSQ=0.8769;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79397302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0466;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0002;THETA=0.0001;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79397319 rs56201890 G GTTTTC 62076 PASS INDEL;BAVGPOST=0.958;BRSQ=0.907;LDAF=0.7136;AVGPOST=0.9537;RSQ=0.9175;ERATE=0.0041;THETA=0.0002;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 79397345 rs11413880 C CT 33638 PASS INDEL;BAVGPOST=0.947;BRSQ=0.883;LDAF=0.6974;AVGPOST=0.9287;RSQ=0.8726;ERATE=0.0081;THETA=0.0003;AC=1554;AN=2184 GT:DS:GL:BD 0.71153843 1
1 79397350 rs71508341 TC T 6778 PASS INDEL;BAVGPOST=0.934;BRSQ=0.856;LDAF=0.6769;AVGPOST=0.8740;RSQ=0.7851;ERATE=0.0172;THETA=0.0002;AC=1535;AN=2184 GT:DS:GL:BD 0.70283884 1
1 79397353 rs55831831 C CT 1101 PASS INDEL;BAVGPOST=0.621;BRSQ=0.259;LDAF=0.6161;AVGPOST=0.6683;RSQ=0.3875;ERATE=0.0307;THETA=0.0003;AC=1459;AN=2184 GT:DS:GL:BD 0.66804028 1
1 79397354 . G GT 1618 PASS INDEL;BAVGPOST=0.982;BRSQ=0.824;LDAF=0.0499;AVGPOST=0.9803;RSQ=0.8550;ERATE=0.0022;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 79397536 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.931;BRSQ=0.766;LDAF=0.8226;AVGPOST=0.8845;RSQ=0.7211;ERATE=0.0316;THETA=0.0003;AC=1861;AN=2184 GT:DS:GL:BD 0.85210621 1
1 79397538 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.637;LDAF=0.0069;AVGPOST=0.9956;RSQ=0.7261;ERATE=0.0004;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79397557 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0714;AVGPOST=0.9984;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 79397698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0472;AVGPOST=0.9988;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79397927 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1473;AVGPOST=0.9984;RSQ=0.9949;ERATE=0.0005;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 79398164 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9994;RSQ=0.5351;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79398188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0032;AVGPOST=0.9959;RSQ=0.4903;ERATE=0.0008;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79398322 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.951;LDAF=0.9568;AVGPOST=0.9954;RSQ=0.9557;ERATE=0.0005;THETA=0.0003;AC=2090;AN=2184 GT:DS:GL:BD 0.95695972 1
1 79398646 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6952;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79398668 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9985;RSQ=0.4076;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79398703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9532;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79398712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1008;AVGPOST=0.9965;RSQ=0.9855;ERATE=0.0004;THETA=0.0005;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 79398834 . G GA 5680 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0470;AVGPOST=0.9990;RSQ=0.9918;ERATE=0.0004;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79398840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0144;AVGPOST=0.9972;RSQ=0.9265;ERATE=0.0004;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79398872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79398873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0478;AVGPOST=0.9978;RSQ=0.9862;ERATE=0.0003;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 79398927 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5595;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79399061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7252;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79399067 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79399082 . CTG C 9006 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0627;AVGPOST=0.9978;RSQ=0.9827;ERATE=0.0005;THETA=0.0003;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 79399138 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0028;AVGPOST=0.9968;RSQ=0.5118;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79399141 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5437;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79399154 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.8275;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79399254 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1484;AVGPOST=0.9966;RSQ=0.9890;ERATE=0.0005;THETA=0.0003;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 79399259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.6851;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79399278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1361;AVGPOST=0.9959;RSQ=0.9861;ERATE=0.0005;THETA=0.0004;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 79399513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.910;LDAF=0.0180;AVGPOST=0.9982;RSQ=0.9653;ERATE=0.0002;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79399579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1103;AVGPOST=0.9931;RSQ=0.9738;ERATE=0.0004;THETA=0.0005;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 79399694 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.824;LDAF=0.0290;AVGPOST=0.9872;RSQ=0.8464;ERATE=0.0005;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79399714 rs59175534 C CA 1392 PASS INDEL;BAVGPOST=0.992;BRSQ=0.822;LDAF=0.0295;AVGPOST=0.9805;RSQ=0.7337;ERATE=0.0033;THETA=0.0002;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 79399743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.980;LDAF=0.1474;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 79399751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0239;AVGPOST=0.9981;RSQ=0.9641;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 79399759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.978;LDAF=0.0460;AVGPOST=0.9983;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 79399803 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1042;AVGPOST=0.9995;RSQ=0.9977;ERATE=0.0003;THETA=0.0001;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 79399975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79400144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79400229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0467;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79400382 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9497;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79400523 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79400559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1499;AVGPOST=0.9942;RSQ=0.9838;ERATE=0.0019;THETA=0.0002;AC=325;AN=2184 GT:DS:GL:BD 0.14880952 0
1 79400655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0833;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 79400685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6684;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79400755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0002;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 79400852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1237;AVGPOST=0.9975;RSQ=0.9915;ERATE=0.0005;THETA=0.0004;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 79400903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0107;AVGPOST=0.9997;RSQ=0.9867;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79400951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0201;AVGPOST=0.9968;RSQ=0.9429;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 79401095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.8184;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79401154 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79401178 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9548;ERATE=0.0003;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79401349 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0167;AVGPOST=0.9996;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79401359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0021;AVGPOST=0.9965;RSQ=0.3785;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79401550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5281;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79401595 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79401628 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.960;LDAF=0.0217;AVGPOST=0.9985;RSQ=0.9802;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79401632 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9970;RSQ=0.8555;ERATE=0.0005;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79401698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79401845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5463;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79401970 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79402030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79402179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79402188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0077;AVGPOST=0.9989;RSQ=0.9402;ERATE=0.0005;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79402207 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79402276 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1182;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 79402300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79402320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0140;AVGPOST=0.9983;RSQ=0.9541;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79402453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79402501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4877;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=1064;AN=2184 GT:DS:GL:BD 0.48717949 0
1 79402543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79402548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.8994;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=1964;AN=2184 GT:DS:GL:BD 0.89926738 1
1 79402607 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.955;LDAF=0.2344;AVGPOST=0.9801;RSQ=0.9598;ERATE=0.0039;THETA=0.0004;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 79402691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0034;AVGPOST=0.9954;RSQ=0.4726;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79402743 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3890;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79402746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0030;AVGPOST=0.9962;RSQ=0.5459;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79402748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.695;LDAF=0.0101;AVGPOST=0.9933;RSQ=0.7290;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79402750 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0169;AVGPOST=0.9991;RSQ=0.9781;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79402797 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0224;AVGPOST=0.9942;RSQ=0.9181;ERATE=0.0006;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79402833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9820;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79402837 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6365;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79402918 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2409;AVGPOST=0.9957;RSQ=0.9917;ERATE=0.0004;THETA=0.0001;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 79402967 . AT A 23691 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1776;AVGPOST=0.9972;RSQ=0.9918;ERATE=0.0006;THETA=0.0003;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 79403007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79403024 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5270;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79403030 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79403100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0083;AVGPOST=0.9983;RSQ=0.9332;ERATE=0.0004;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79403150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.5191;AVGPOST=0.9969;RSQ=0.9948;ERATE=0.0010;THETA=0.0003;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 79403166 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9986;RSQ=0.8893;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79403197 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1767;AVGPOST=0.9993;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 79403319 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79403460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79403480 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0048;AVGPOST=0.9982;RSQ=0.8355;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79403508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79403526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8695;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79403551 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79403572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0305;AVGPOST=0.9969;RSQ=0.9605;ERATE=0.0003;THETA=0.0002;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 79403747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79403748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3687;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0005;THETA=0.0002;AC=805;AN=2184 GT:DS:GL:BD 0.36858973 0
1 79403760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3851;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 79403765 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79403809 . AAAGCC A 2148 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9996;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79403944 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79403949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3827;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 79403996 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8553;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79404002 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9995;RSQ=0.9799;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79404029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4945;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79404039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.839;LDAF=0.0105;AVGPOST=0.9982;RSQ=0.9299;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79404114 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79404125 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7955;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79404333 . AC A 1166 PASS INDEL;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0113;AVGPOST=0.9962;RSQ=0.8656;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79404439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.7010;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79404463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6905;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79404500 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8712;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79404501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4083;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0005;THETA=0.0002;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 79404507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7874;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79404662 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.3996;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79404675 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79404770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2994;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79405047 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0112;AVGPOST=0.9990;RSQ=0.9631;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79405053 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0042;AVGPOST=0.9967;RSQ=0.6912;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79405089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6712;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79405157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1287;AVGPOST=0.9959;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 79405270 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6432;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79405316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9221;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79405339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79405509 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2058;AVGPOST=0.9990;RSQ=0.9976;ERATE=0.0003;THETA=0.0001;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 79405621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7336;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 79405695 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2262;AVGPOST=0.9949;RSQ=0.9906;ERATE=0.0005;THETA=0.0002;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 79405739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2294;AVGPOST=0.9975;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 79405746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79405775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79405787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8796;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79405796 rs17882522 CT C 32 PASS INDEL;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.4206;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79405890 . T TA 27 PASS INDEL;BAVGPOST=0.999;BRSQ=0.528;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5231;ERATE=0.0005;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79406218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79406245 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.708;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7508;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79406257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.862;LDAF=0.0079;AVGPOST=0.9983;RSQ=0.9004;ERATE=0.0008;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79406335 . GAAT G 733 PASS INDEL;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9061;ERATE=0.0004;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79406422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79406462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8383;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79406750 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5272;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79406751 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1571;AVGPOST=0.9949;RSQ=0.9853;ERATE=0.0003;THETA=0.0006;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 79406827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5741;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79406834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8365;ERATE=0.0006;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79406866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7722;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79406871 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7202;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79407156 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8288;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79407180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6868;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79407273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.519;LDAF=0.0107;AVGPOST=0.9868;RSQ=0.5428;ERATE=0.0013;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79407322 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.9365;AVGPOST=0.9976;RSQ=0.9846;ERATE=0.0005;THETA=0.0008;AC=2045;AN=2184 GT:DS:GL:BD 0.93635529 1
1 79407411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9012;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79407446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9179;ERATE=0.0004;THETA=0.0028;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79407620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79407748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0038;AVGPOST=0.9977;RSQ=0.7536;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79407803 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9801;ERATE=0.0004;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79407828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9376;AVGPOST=0.9990;RSQ=0.9935;ERATE=0.0004;THETA=0.0010;AC=2047;AN=2184 GT:DS:GL:BD 0.93727106 1
1 79407887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79407898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0017;AVGPOST=0.9976;RSQ=0.4825;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79407961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9372;AVGPOST=0.9989;RSQ=0.9917;ERATE=0.0005;THETA=0.0005;AC=2047;AN=2184 GT:DS:GL:BD 0.93727106 1
1 79408030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8393;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79408109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7034;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79408238 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1565;AVGPOST=0.9980;RSQ=0.9942;ERATE=0.0004;THETA=0.0024;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 79408239 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0414;AVGPOST=0.9985;RSQ=0.9842;ERATE=0.0005;THETA=0.0010;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 79408273 . C CATA 233 PASS INDEL;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7032;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79408279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4243;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79408301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79408354 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0073;AVGPOST=0.9952;RSQ=0.7599;ERATE=0.0008;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79408407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79408425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0023;AVGPOST=0.9968;RSQ=0.4977;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79408460 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79408597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9517;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79408640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0411;AVGPOST=0.9990;RSQ=0.9896;ERATE=0.0004;THETA=0.0004;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 79408733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7846;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79408753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79408758 . A AACT 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5281;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79408896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79409072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79409078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6412;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79409114 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79409128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1691;AVGPOST=0.9952;RSQ=0.9870;ERATE=0.0010;THETA=0.0008;AC=367;AN=2184 GT:DS:GL:BD 0.16804029 0
1 79409182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.555;LDAF=0.0141;AVGPOST=0.9836;RSQ=0.5680;ERATE=0.0010;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79409284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.533;LDAF=0.0130;AVGPOST=0.9853;RSQ=0.5719;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79409316 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.950;BRSQ=0.784;LDAF=0.8842;AVGPOST=0.9762;RSQ=0.9065;ERATE=0.0008;THETA=0.0008;AC=1929;AN=2184 GT:DS:GL:BD 0.88324177 1
1 79409322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.941;LDAF=0.6272;AVGPOST=0.9769;RSQ=0.9696;ERATE=0.0007;THETA=0.0007;AC=1379;AN=2184 GT:DS:GL:BD 0.63141024 1
1 79409461 . AT A 277 PASS INDEL;BAVGPOST=0.909;BRSQ=0.318;LDAF=0.1175;AVGPOST=0.8564;RSQ=0.4457;ERATE=0.0245;THETA=0.0007;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 79409573 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4789;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79409585 . T TAAAG 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4719;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79409699 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9991;RSQ=0.9472;ERATE=0.0004;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79409729 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79409853 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.6384;AVGPOST=0.9965;RSQ=0.9951;ERATE=0.0003;THETA=0.0010;AC=1394;AN=2184 GT:DS:GL:BD 0.63827837 1
1 79409954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79410063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79410083 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8116;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79410183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.600;LDAF=0.0050;AVGPOST=0.9939;RSQ=0.5371;ERATE=0.0012;THETA=0.0038;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79410253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.9375;AVGPOST=0.9988;RSQ=0.9910;ERATE=0.0004;THETA=0.0004;AC=2047;AN=2184 GT:DS:GL:BD 0.93727106 1
1 79410254 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0038;AVGPOST=0.9966;RSQ=0.6803;ERATE=0.0007;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79410272 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5205;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79410423 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79410496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9356;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79410630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79410742 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9951;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79410761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.9236;AVGPOST=0.9993;RSQ=0.9954;ERATE=0.0003;THETA=0.0010;AC=2017;AN=2184 GT:DS:GL:BD 0.92353481 1
1 79410938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8295;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79410974 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9369;AVGPOST=0.9989;RSQ=0.9916;ERATE=0.0004;THETA=0.0029;AC=2047;AN=2184 GT:DS:GL:BD 0.93727106 1
1 79411028 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.5944;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79411126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6093;ERATE=0.0007;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79411160 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4254;ERATE=0.0006;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79411192 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8667;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79411197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1826;AVGPOST=0.9970;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 79411291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0095;AVGPOST=0.9990;RSQ=0.9601;ERATE=0.0005;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79411404 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0132;AVGPOST=0.9991;RSQ=0.9749;ERATE=0.0003;THETA=0.0024;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79411408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79411468 . GC G 1283 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9985;RSQ=0.9423;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79411499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9987;RSQ=0.9538;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79411571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8465;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79411601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0053;AVGPOST=0.9977;RSQ=0.8458;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79411657 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7085;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79411696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8134;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79411790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9992;RSQ=0.9685;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79411808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79411914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6037;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79411967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8298;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79412324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9817;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79412334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.1910;AVGPOST=0.9789;RSQ=0.9524;ERATE=0.0043;THETA=0.0006;AC=404;AN=2184 GT:DS:GL:BD 0.18498169 0
1 79412352 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0031;AVGPOST=0.9991;RSQ=0.8806;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79412538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79412540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.959;LDAF=0.1818;AVGPOST=0.9971;RSQ=0.9928;ERATE=0.0003;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 79412641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9986;RSQ=0.9525;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79412727 . C CT 330 PASS INDEL;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9793;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79412727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0144;AVGPOST=0.9984;RSQ=0.9531;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79412728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3489;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0007;THETA=0.0005;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 79412731 . G GA 2842 PASS INDEL;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0213;AVGPOST=0.9968;RSQ=0.9404;ERATE=0.0007;THETA=0.0005;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 79412882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8151;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79413053 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0144;AVGPOST=0.9996;RSQ=0.9876;ERATE=0.0004;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 79413103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.8937;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79413110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0497;AVGPOST=0.9991;RSQ=0.9923;ERATE=0.0004;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 79413117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9802;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79413138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.807;LDAF=0.0082;AVGPOST=0.9963;RSQ=0.8413;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79413269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5630;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79413307 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.6682;AVGPOST=0.9883;RSQ=0.9817;ERATE=0.0017;THETA=0.0008;AC=1464;AN=2184 GT:DS:GL:BD 0.67032969 1
1 79413346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1443;AVGPOST=0.9979;RSQ=0.9936;ERATE=0.0004;THETA=0.0005;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 79413442 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0051;AVGPOST=0.9965;RSQ=0.7556;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79413674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8978;ERATE=0.0005;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79413709 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7826;ERATE=0.0004;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79413726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79413784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.971;LDAF=0.1434;AVGPOST=0.9974;RSQ=0.9923;ERATE=0.0004;THETA=0.0016;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 79413827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79413887 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79413936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9286;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79413937 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5921;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79413968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9689;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79413969 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.1822;AVGPOST=0.9971;RSQ=0.9933;ERATE=0.0005;THETA=0.0003;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 79413988 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79413999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79414116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79414129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.825;LDAF=0.0076;AVGPOST=0.9978;RSQ=0.9008;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79414158 . CA C 47 PASS INDEL;BAVGPOST=0.999;BRSQ=0.744;LDAF=0.0041;AVGPOST=0.9960;RSQ=0.6409;ERATE=0.0009;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79414163 . T TATC 13321 PASS INDEL;BAVGPOST=0.839;BRSQ=0.774;LDAF=0.5374;AVGPOST=0.8285;RSQ=0.7904;ERATE=0.0226;THETA=0.0006;AC=1236;AN=2184 GT:DS:GL:BD 0.56593406 1
1 79414200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79414331 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79414344 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6974;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79414466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1870;AVGPOST=0.9975;RSQ=0.9942;ERATE=0.0005;THETA=0.0004;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 79414508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6280;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79414545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6330;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79414546 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0098;AVGPOST=0.9993;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79414560 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5111;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79414566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.6737;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0006;THETA=0.0004;AC=1473;AN=2184 GT:DS:GL:BD 0.67445058 1
1 79414567 rs35772114 CA C 1282 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9991;RSQ=0.9640;ERATE=0.0004;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79414746 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1827;AVGPOST=0.9978;RSQ=0.9947;ERATE=0.0005;THETA=0.0005;AC=399;AN=2184 GT:DS:GL:BD 0.18269230 0
1 79414801 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8319;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79414858 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.701;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6484;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79414999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3251;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 79415107 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9496;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79415132 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9991;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79415173 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6937;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79415214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9828;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79415258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9772;ERATE=0.0003;THETA=0.0020;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79415281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5512;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79415354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7973;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79415355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0145;AVGPOST=0.9971;RSQ=0.9163;ERATE=0.0006;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79415629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79415661 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0088;AVGPOST=0.9987;RSQ=0.9449;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79415733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0155;AVGPOST=0.9986;RSQ=0.9566;ERATE=0.0005;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79415781 . TTATTAACATAAGAA T 686 PASS INDEL;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8340;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79415818 . A AC 1929 PASS INDEL;BAVGPOST=0.980;BRSQ=0.669;LDAF=0.0284;AVGPOST=0.9891;RSQ=0.8566;ERATE=0.0006;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79416047 . TTGAC T 604 PASS INDEL;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0054;AVGPOST=0.9975;RSQ=0.7946;ERATE=0.0006;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79416081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.318;LDAF=0.0020;AVGPOST=0.9973;RSQ=0.4534;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79416183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79416254 . CCT C 85 PASS INDEL;BAVGPOST=0.998;BRSQ=0.791;LDAF=0.0038;AVGPOST=0.9984;RSQ=0.8482;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79416332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0440;AVGPOST=0.9996;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 79416375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0065;AVGPOST=0.9970;RSQ=0.8288;ERATE=0.0003;THETA=0.0043;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79416377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1640;AVGPOST=0.9982;RSQ=0.9952;ERATE=0.0005;THETA=0.0003;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 79416664 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79416988 . CTT C 191 PASS INDEL;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6393;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79417026 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79417063 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1630;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0003;THETA=0.0008;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 79417114 . AATC A 735 PASS INDEL;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0325;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 79417134 rs112191921 TCATC T 5151 PASS INDEL;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0332;AVGPOST=0.9986;RSQ=0.9817;ERATE=0.0003;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 79417136 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0331;AVGPOST=0.9994;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 79417197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9421;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79417280 . GGA G 76 PASS INDEL;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0092;AVGPOST=0.9988;RSQ=0.9405;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79417293 . GAGA G 1843 PASS INDEL;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0092;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79417294 . GT G 1230 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79417299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1472;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 79417308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0343;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 79417318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79417490 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79417494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8499;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79417517 . AG A 144 PASS INDEL;BAVGPOST=0.995;BRSQ=0.954;LDAF=0.0501;AVGPOST=0.9989;RSQ=0.9895;ERATE=0.0005;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 79417532 . GA G 4241 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0512;AVGPOST=0.9974;RSQ=0.9808;ERATE=0.0004;THETA=0.0003;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 79417533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79417609 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79417635 . C CT 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5470;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79417665 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9486;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79417714 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79417747 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.9148;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79417881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79417911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6046;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79417992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.7052;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79418052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79418099 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.9913;AVGPOST=0.9999;RSQ=0.9924;ERATE=0.0003;THETA=0.0006;AC=2165;AN=2184 GT:DS:GL:BD 0.99130034 1
1 79418118 . T TAACA 369 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79418124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7902;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79418213 . CTTA C 709 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9557;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79418254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79418326 . C CTT 416 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79418334 . G GAT 167 PASS INDEL;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0037;AVGPOST=0.9971;RSQ=0.7550;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79418356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79418407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79418445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0415;AVGPOST=0.9985;RSQ=0.9860;ERATE=0.0003;THETA=0.0005;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 79418506 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5216;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79418559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79418677 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79418754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4575;AVGPOST=0.9962;RSQ=0.9949;ERATE=0.0006;THETA=0.0005;AC=998;AN=2184 GT:DS:GL:BD 0.45695969 0
1 79418792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79418909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6402;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79418941 rs10683229 C CTAAT 94858 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5007;AVGPOST=0.9750;RSQ=0.9641;ERATE=0.0047;THETA=0.0004;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 79418963 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0786;AVGPOST=0.9984;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 79419161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5533;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79419301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5037;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79419433 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79419601 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0030;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79419881 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8274;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79419898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0691;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 79420000 . C CT 237 PASS INDEL;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8990;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79420037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79420257 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79420358 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79420449 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1650;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0004;AC=360;AN=2184 GT:DS:GL:BD 0.16483517 0
1 79420662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 79420673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79420680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1641;AVGPOST=0.9982;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=358;AN=2184 GT:DS:GL:BD 0.16391942 0
1 79420697 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9930;ERATE=0.0003;THETA=0.0017;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79420742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0105;AVGPOST=0.9989;RSQ=0.9518;ERATE=0.0007;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79420779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8525;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79420946 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79421070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9264;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79421320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0219;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0002;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79421588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79421691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6045;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79421989 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0035;AVGPOST=0.9981;RSQ=0.8041;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79422024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8416;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79422106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6787;ERATE=0.0007;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79422131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7743;ERATE=0.0003;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79422300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5322;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79422347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7340;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79422507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0002;THETA=0.0066;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79422615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7524;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79422740 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79422741 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4604;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=1006;AN=2184 GT:DS:GL:BD 0.46062270 0
1 79422845 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0138;AVGPOST=0.9989;RSQ=0.9687;ERATE=0.0002;THETA=0.0001;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79422989 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0121;AVGPOST=0.9995;RSQ=0.9816;ERATE=0.0002;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79423071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.4406;AVGPOST=0.9949;RSQ=0.9920;ERATE=0.0010;THETA=0.0003;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 79423135 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0002;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79423168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0073;AVGPOST=0.9984;RSQ=0.9056;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79423264 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0090;AVGPOST=0.9984;RSQ=0.9292;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79423410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9841;ERATE=0.0002;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79423484 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6873;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79423485 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9802;ERATE=0.0002;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79423493 . C CTG 111 PASS INDEL;BAVGPOST=0.998;BRSQ=0.593;LDAF=0.0037;AVGPOST=0.9983;RSQ=0.7951;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79423655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1535;AVGPOST=0.9975;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 79423676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5309;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79423696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5965;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79423719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0128;AVGPOST=0.9996;RSQ=0.9871;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79423720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0129;AVGPOST=0.9998;RSQ=0.9921;ERATE=0.0002;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79423730 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1542;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 79423811 . G GA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4450;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79423860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79423895 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79424024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9657;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79424126 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6265;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79424158 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.8024;AVGPOST=0.9950;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=1755;AN=2184 GT:DS:GL:BD 0.80357140 1
1 79424197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79424225 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79424232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0170;AVGPOST=0.9997;RSQ=0.9921;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79424255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79424262 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79424271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79424301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79424439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4415;AVGPOST=0.9967;RSQ=0.9944;ERATE=0.0006;THETA=0.0004;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 79424453 . C CCTA 291 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7741;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79424458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1753;AVGPOST=0.9936;RSQ=0.9835;ERATE=0.0008;THETA=0.0004;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 79424483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.924;LDAF=0.1545;AVGPOST=0.9951;RSQ=0.9862;ERATE=0.0005;THETA=0.0004;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 79424533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7633;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79424651 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.973;LDAF=0.1569;AVGPOST=0.9956;RSQ=0.9879;ERATE=0.0011;THETA=0.0003;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 79424659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0171;AVGPOST=0.9973;RSQ=0.9356;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79424678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2616;AVGPOST=0.9916;RSQ=0.9830;ERATE=0.0010;THETA=0.0008;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 79424703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0022;AVGPOST=0.9987;RSQ=0.7301;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79424712 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8146;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79424893 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1545;AVGPOST=0.9989;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 79425068 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7519;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79425164 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1169;AVGPOST=0.9984;RSQ=0.9939;ERATE=0.0003;THETA=0.0002;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 79425345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0175;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79425405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79425413 . CCT C 14 PASS INDEL;BAVGPOST=0.861;BRSQ=0.105;LDAF=0.1347;AVGPOST=0.8520;RSQ=0.5122;ERATE=0.0067;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 79425419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7736;ERATE=0.0002;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79425456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79425534 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79425713 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1540;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=336;AN=2184 GT:DS:GL:BD 0.15384616 0
1 79425873 . TTTC T 5631 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0240;AVGPOST=0.9984;RSQ=0.9700;ERATE=0.0004;THETA=0.0002;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79426063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7545;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79426179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79426226 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0002;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79426279 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8608;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79426284 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79426387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9721;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79426517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1756;AVGPOST=0.9995;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 79426634 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0180;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0002;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 79426730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6707;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79426745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9993;AVGPOST=0.9985;RSQ=0.2301;ERATE=0.0003;THETA=0.0004;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 79426846 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.552;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7238;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79426880 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79427081 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7676;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79427130 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6435;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79427134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7612;AVGPOST=0.9981;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=1664;AN=2184 GT:DS:GL:BD 0.76190478 1
1 79427159 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0064;AVGPOST=0.9976;RSQ=0.8470;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79427174 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.5944;ERATE=0.0005;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79427193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0069;AVGPOST=0.9987;RSQ=0.9327;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79427296 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9411;ERATE=0.0002;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79427312 . A ATT 29 PASS INDEL;BAVGPOST=0.999;BRSQ=0.580;LDAF=0.0041;AVGPOST=0.9942;RSQ=0.4889;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79427417 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0073;AVGPOST=0.9965;RSQ=0.8223;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79427566 . A ATT 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.7871;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79427599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7630;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=1667;AN=2184 GT:DS:GL:BD 0.76327837 1
1 79427625 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5490;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79427672 . ATG A 47 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8076;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79427735 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1721;AVGPOST=0.9966;RSQ=0.9920;ERATE=0.0005;THETA=0.0005;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 79427761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.866;LDAF=0.0151;AVGPOST=0.9990;RSQ=0.9726;ERATE=0.0004;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79427795 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79427845 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79427850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.9603;AVGPOST=0.9990;RSQ=0.9892;ERATE=0.0003;THETA=0.0005;AC=2098;AN=2184 GT:DS:GL:BD 0.96062273 1
1 79427851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7906;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79427903 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79427993 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.889;LDAF=0.9308;AVGPOST=0.9689;RSQ=0.8307;ERATE=0.0112;THETA=0.0006;AC=2055;AN=2184 GT:DS:GL:BD 0.94093406 1
1 79428007 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8779;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79428073 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79428138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8417;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79428230 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79428281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8279;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79428294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0131;AVGPOST=0.9989;RSQ=0.9648;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79428345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79428435 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8739;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79428574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6898;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79428680 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.8034;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79428713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8251;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79428764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79428878 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0147;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0002;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79428880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9080;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79428949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0097;AVGPOST=0.9971;RSQ=0.9062;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79428965 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6684;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79429135 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1757;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 79429173 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.650;LDAF=0.0082;AVGPOST=0.9924;RSQ=0.6563;ERATE=0.0013;THETA=0.0007;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79429174 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79429190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1758;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 79429285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79429315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79429557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7594;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79429638 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1755;AVGPOST=0.9991;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 79429778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5447;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=1191;AN=2184 GT:DS:GL:BD 0.54532969 1
1 79429838 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7416;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79429854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0033;AVGPOST=0.9996;RSQ=0.9517;ERATE=0.0002;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79429878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79430144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8739;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79430149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1728;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0003;THETA=0.0006;AC=375;AN=2184 GT:DS:GL:BD 0.17170329 0
1 79430150 . C CT 134 PASS INDEL;BAVGPOST=0.985;BRSQ=0.529;LDAF=0.0313;AVGPOST=0.9610;RSQ=0.4887;ERATE=0.0086;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 79430185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79430237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0048;AVGPOST=0.9979;RSQ=0.8355;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79430238 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1766;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 79430260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0088;AVGPOST=0.9986;RSQ=0.9409;ERATE=0.0002;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 79430289 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0050;AVGPOST=0.9973;RSQ=0.8017;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79430326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8900;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79430558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0023;AVGPOST=0.9964;RSQ=0.4540;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79430562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79430735 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79430750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8064;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79430807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.6924;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79430834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79430915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79430943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0122;AVGPOST=0.9994;RSQ=0.9749;ERATE=0.0004;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79430944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7345;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79430957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1756;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 79430959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0268;AVGPOST=0.9992;RSQ=0.9868;ERATE=0.0002;THETA=0.0003;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 79430963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0166;AVGPOST=0.9992;RSQ=0.9803;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 79431132 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2168;AVGPOST=0.9984;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=474;AN=2184 GT:DS:GL:BD 0.21703297 0
1 79431162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4548;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79431197 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0002;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79431223 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79431518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0026;AVGPOST=0.9988;RSQ=0.7950;ERATE=0.0008;THETA=0.0050;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79431641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8678;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79431679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.8742;AVGPOST=0.9914;RSQ=0.9708;ERATE=0.0008;THETA=0.0011;AC=1912;AN=2184 GT:DS:GL:BD 0.87545788 1
1 79431680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7698;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79431792 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0306;AVGPOST=0.9981;RSQ=0.9740;ERATE=0.0004;THETA=0.0007;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 79431830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0061;AVGPOST=0.9993;RSQ=0.9471;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79431899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0082;AVGPOST=0.9996;RSQ=0.9794;ERATE=0.0003;THETA=0.0042;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 79431994 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79432057 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6995;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79432139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8804;AVGPOST=0.9992;RSQ=0.9968;ERATE=0.0003;THETA=0.0011;AC=1922;AN=2184 GT:DS:GL:BD 0.88003665 1
1 79432244 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9408;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79432251 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79432265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79432270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8802;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0004;THETA=0.0010;AC=1922;AN=2184 GT:DS:GL:BD 0.88003665 1
1 79432281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79432370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.5072;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79432391 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0004;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79432461 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79432472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0100;AVGPOST=0.9989;RSQ=0.9643;ERATE=0.0003;THETA=0.0006;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79432540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8392;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79432583 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0144;AVGPOST=0.9981;RSQ=0.9517;ERATE=0.0003;THETA=0.0025;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79432636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79432677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7359;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79432920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79433034 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9031;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79433257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79433322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79433386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8558;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79433387 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79433501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7791;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79433539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0071;AVGPOST=0.9973;RSQ=0.8383;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79433754 rs71875039 C CA 190 PASS INDEL;BAVGPOST=0.765;BRSQ=0.152;LDAF=0.2756;AVGPOST=0.6524;RSQ=0.2552;ERATE=0.0351;THETA=0.0007;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 79433850 . TATATATACAC T 627 PASS INDEL;BAVGPOST=0.993;BRSQ=0.633;LDAF=0.0108;AVGPOST=0.9918;RSQ=0.6914;ERATE=0.0011;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79433911 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.656;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.4876;ERATE=0.0006;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79433935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.3897;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79433948 . G GTA 1710 PASS INDEL;BAVGPOST=0.994;BRSQ=0.881;LDAF=0.0217;AVGPOST=0.9796;RSQ=0.6514;ERATE=0.0018;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79433957 . AATAT A 399 PASS INDEL;BAVGPOST=0.997;BRSQ=0.905;LDAF=0.0158;AVGPOST=0.9981;RSQ=0.9453;ERATE=0.0006;THETA=0.0017;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79434045 . TATATA T 2082 PASS INDEL;BAVGPOST=0.997;BRSQ=0.897;LDAF=0.0157;AVGPOST=0.9984;RSQ=0.9534;ERATE=0.0005;THETA=0.0011;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79434047 . G GTA 252 PASS INDEL;BAVGPOST=0.998;BRSQ=0.648;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6591;ERATE=0.0006;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79434120 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9387;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79434186 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5991;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79434319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.4454;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79434428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79434494 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.8193;AVGPOST=0.9976;RSQ=0.9936;ERATE=0.0004;THETA=0.0019;AC=1790;AN=2184 GT:DS:GL:BD 0.81959707 1
1 79434702 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79434722 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9871;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79434724 . T TG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5650;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79434831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0392;AVGPOST=0.9973;RSQ=0.9713;ERATE=0.0005;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 79434838 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.928;LDAF=0.0125;AVGPOST=0.9984;RSQ=0.9471;ERATE=0.0005;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79434859 . AAAG A 1925 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0151;AVGPOST=0.9992;RSQ=0.9782;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79434874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79434898 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79434913 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.8859;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79434928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79434992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79435106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6461;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79435107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79435109 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8136;ERATE=0.0005;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79435155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6158;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79435435 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8747;ERATE=0.0003;THETA=0.0015;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79435491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0117;AVGPOST=0.9974;RSQ=0.9170;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79435511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0036;AVGPOST=0.9957;RSQ=0.5224;ERATE=0.0007;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79435527 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0160;AVGPOST=0.9993;RSQ=0.9821;ERATE=0.0004;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79435802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0059;AVGPOST=0.9995;RSQ=0.9584;ERATE=0.0003;THETA=0.0010;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79435823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0236;AVGPOST=0.9987;RSQ=0.9737;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 79436079 . CT C 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4554;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79436213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.983;LDAF=0.3218;AVGPOST=0.9673;RSQ=0.9490;ERATE=0.0009;THETA=0.0004;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 79436279 . CAT C 42 PASS INDEL;BAVGPOST=0.998;BRSQ=0.622;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5996;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79436307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4746;ERATE=0.0006;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79436404 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8534;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79436520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0618;AVGPOST=0.9987;RSQ=0.9914;ERATE=0.0004;THETA=0.0004;AC=134;AN=2184 GT:DS:GL:BD 0.06135531 0
1 79436569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79436732 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79436790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79436833 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7865;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79436884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2029;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0017;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 79436983 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.3990;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79437003 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0254;AVGPOST=0.9985;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 79437010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4375;AVGPOST=0.9972;RSQ=0.9959;ERATE=0.0005;THETA=0.0006;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 79437021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0131;AVGPOST=0.9996;RSQ=0.9873;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79437108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.2322;AVGPOST=0.9963;RSQ=0.9913;ERATE=0.0007;THETA=0.0004;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 79437146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8717;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79437281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.953;LDAF=0.2617;AVGPOST=0.9939;RSQ=0.9899;ERATE=0.0012;THETA=0.0005;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 79437406 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5209;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79437547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8632;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79437576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79437627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7177;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79437685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8366;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79437707 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.888;LDAF=0.0184;AVGPOST=0.9944;RSQ=0.8840;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 79437764 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8801;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79437782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7064;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79437813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9409;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79437824 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9998;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79437964 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0289;AVGPOST=0.9995;RSQ=0.9911;ERATE=0.0004;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 79438175 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5044;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79438210 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1934;AVGPOST=0.9971;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=422;AN=2184 GT:DS:GL:BD 0.19322345 0
1 79438227 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0028;AVGPOST=0.9979;RSQ=0.7126;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79438322 . CA C 2362 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0322;AVGPOST=0.9982;RSQ=0.9758;ERATE=0.0005;THETA=0.0005;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 79438352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79438496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0557;AVGPOST=0.9973;RSQ=0.9821;ERATE=0.0004;THETA=0.0006;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 79438611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9989;RSQ=0.9658;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79438658 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1231;AVGPOST=0.9972;RSQ=0.9891;ERATE=0.0006;THETA=0.0006;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 79438727 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.738;LDAF=0.0062;AVGPOST=0.9966;RSQ=0.7802;ERATE=0.0005;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79438771 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0135;AVGPOST=0.9937;RSQ=0.8217;ERATE=0.0005;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79438801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0300;AVGPOST=0.9987;RSQ=0.9838;ERATE=0.0004;THETA=0.0005;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 79438902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0290;AVGPOST=0.9994;RSQ=0.9905;ERATE=0.0003;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 79438957 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5235;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79439038 rs112735465 CA C 824 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0116;AVGPOST=0.9994;RSQ=0.9778;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79439085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.846;LDAF=0.0108;AVGPOST=0.9974;RSQ=0.9067;ERATE=0.0007;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 79439094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0134;AVGPOST=0.9985;RSQ=0.9495;ERATE=0.0004;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79439122 rs11463393 T TC 3942 PASS INDEL;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0298;AVGPOST=0.9978;RSQ=0.9751;ERATE=0.0004;THETA=0.0003;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 79439199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0132;AVGPOST=0.9994;RSQ=0.9785;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 79439265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3998;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0006;THETA=0.0005;AC=875;AN=2184 GT:DS:GL:BD 0.40064102 0
1 79439312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9091;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79439387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4287;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=938;AN=2184 GT:DS:GL:BD 0.42948717 0
1 79439396 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1788;AVGPOST=0.9968;RSQ=0.9911;ERATE=0.0005;THETA=0.0005;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 79439410 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1941;AVGPOST=0.9993;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 79439468 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5006;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79439479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7870;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79439541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0127;AVGPOST=0.9991;RSQ=0.9706;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 79439560 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9621;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79439653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7577;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79439704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7951;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79439735 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0311;AVGPOST=0.9998;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 79439766 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1804;AVGPOST=0.9985;RSQ=0.9959;ERATE=0.0003;THETA=0.0004;AC=394;AN=2184 GT:DS:GL:BD 0.18040293 0
1 79439878 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79439960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8985;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79440108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.753;LDAF=0.0047;AVGPOST=0.9967;RSQ=0.7026;ERATE=0.0017;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79440111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79440224 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0033;AVGPOST=0.9961;RSQ=0.6111;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79440281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7609;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79440292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8889;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79440293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5021;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79440336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79440411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8577;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79440438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.9015;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79440448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0314;AVGPOST=0.9993;RSQ=0.9901;ERATE=0.0004;THETA=0.0006;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 79440458 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79440512 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9539;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79440750 . TA T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5817;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79440753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0124;AVGPOST=0.9970;RSQ=0.8954;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79440758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79440760 rs79274741 G GTA 17683 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1974;AVGPOST=0.9941;RSQ=0.9866;ERATE=0.0008;THETA=0.0004;AC=432;AN=2184 GT:DS:GL:BD 0.19780220 0
1 79440760 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7239;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79440808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.655;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79440835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9543;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79440916 . TATAG T 269 PASS INDEL;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0067;AVGPOST=0.9959;RSQ=0.7576;ERATE=0.0006;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79440993 rs112076455 TAGAG T 129 PASS INDEL;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0030;AVGPOST=0.9982;RSQ=0.7677;ERATE=0.0006;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79440999 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6730;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79441118 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.770;LDAF=0.0096;AVGPOST=0.9941;RSQ=0.7390;ERATE=0.0009;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79441183 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0290;AVGPOST=0.9995;RSQ=0.9918;ERATE=0.0004;THETA=0.0008;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 79441220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7553;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79441452 . A AC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.692;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5260;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79441506 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6250;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79441723 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9070;ERATE=0.0005;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79441731 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79441780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6660;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79441803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0374;AVGPOST=0.9993;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 79441838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9514;ERATE=0.0002;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79441893 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5116;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79442037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79442179 . CAT C 137 PASS INDEL;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5027;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79442328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79442468 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0229;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0003;THETA=0.0008;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79442478 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0048;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79442484 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9818;ERATE=0.0003;THETA=0.0016;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79442680 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.962;LDAF=0.7798;AVGPOST=0.9755;RSQ=0.9494;ERATE=0.0067;THETA=0.0007;AC=1717;AN=2184 GT:DS:GL:BD 0.78617215 1
1 79442691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79442704 . AACACTGC A 583 PASS INDEL;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0062;AVGPOST=0.9989;RSQ=0.9237;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79442822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9998;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 79442942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79442960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9717;ERATE=0.0002;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79442967 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=1.0000;RSQ=0.9992;ERATE=0.0002;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 79443184 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0177;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0002;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 79443209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79443210 . AT A 5390 PASS INDEL;BAVGPOST=0.904;BRSQ=0.777;LDAF=0.2569;AVGPOST=0.9420;RSQ=0.8928;ERATE=0.0006;THETA=0.0005;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 79443289 . T TA 94 PASS INDEL;BAVGPOST=0.976;BRSQ=0.480;LDAF=0.0259;AVGPOST=0.9738;RSQ=0.5889;ERATE=0.0011;THETA=0.0024;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 79443294 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.971;LDAF=0.2350;AVGPOST=0.9882;RSQ=0.9762;ERATE=0.0081;THETA=0.0006;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 79443295 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.965;LDAF=0.0394;AVGPOST=0.9965;RSQ=0.9616;ERATE=0.0065;THETA=0.0009;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 79443296 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8990;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0010;AC=1963;AN=2184 GT:DS:GL:BD 0.89880955 1
1 79443489 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79443588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0124;AVGPOST=0.9984;RSQ=0.9539;ERATE=0.0004;THETA=0.0012;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79443778 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.817;LDAF=0.0063;AVGPOST=0.9973;RSQ=0.8388;ERATE=0.0005;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79443896 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.508;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5255;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79443954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8758;ERATE=0.0004;THETA=0.0051;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79443971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0054;AVGPOST=0.9978;RSQ=0.8359;ERATE=0.0004;THETA=0.0035;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79444012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0023;AVGPOST=0.9969;RSQ=0.4485;ERATE=0.0008;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79444013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79444085 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79444122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6900;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79444222 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79444364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79444385 . CT C 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0025;AVGPOST=0.9979;RSQ=0.6602;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79444418 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0003;THETA=0.0032;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79444459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7994;AVGPOST=0.9965;RSQ=0.9922;ERATE=0.0004;THETA=0.0007;AC=1746;AN=2184 GT:DS:GL:BD 0.79945058 1
1 79444461 . T TA 199 PASS INDEL;BAVGPOST=0.967;BRSQ=0.502;LDAF=0.0557;AVGPOST=0.9331;RSQ=0.4732;ERATE=0.0119;THETA=0.0013;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 79444491 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0098;AVGPOST=0.9995;RSQ=0.9777;ERATE=0.0004;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79444674 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9247;ERATE=0.0004;THETA=0.0021;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79444738 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8568;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79444816 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0040;AVGPOST=0.9990;RSQ=0.9067;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79444961 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.910;LDAF=0.0115;AVGPOST=0.9963;RSQ=0.8738;ERATE=0.0006;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79445006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.603;LDAF=0.0184;AVGPOST=0.9829;RSQ=0.6417;ERATE=0.0019;THETA=0.0023;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79445069 . C CA 501 PASS INDEL;BAVGPOST=0.982;BRSQ=0.573;LDAF=0.0367;AVGPOST=0.9589;RSQ=0.5354;ERATE=0.0121;THETA=0.0011;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 79445131 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0114;AVGPOST=0.9975;RSQ=0.9161;ERATE=0.0004;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79445141 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8395;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79445151 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0067;AVGPOST=0.9997;RSQ=0.9828;ERATE=0.0002;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79445223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8993;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79445251 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9562;ERATE=0.0002;THETA=0.0024;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79445283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79445285 . CA C 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3985;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79445397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8213;ERATE=0.0003;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79445413 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79445485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8647;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79445495 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0318;AVGPOST=0.9983;RSQ=0.9805;ERATE=0.0003;THETA=0.0010;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 79445599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4164;ERATE=0.0004;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79445655 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4352;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79445659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.8560;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79445669 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9746;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79445919 . A AT 271 PASS INDEL;BAVGPOST=0.977;BRSQ=0.514;LDAF=0.0470;AVGPOST=0.9365;RSQ=0.4380;ERATE=0.0084;THETA=0.0015;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 79446250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0059;AVGPOST=0.9985;RSQ=0.8996;ERATE=0.0004;THETA=0.0022;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79446342 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.548;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79446424 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0285;AVGPOST=0.9992;RSQ=0.9870;ERATE=0.0004;THETA=0.0005;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 79446526 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0119;AVGPOST=0.9973;RSQ=0.9109;ERATE=0.0006;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 79446654 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8654;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79446851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0422;AVGPOST=0.9996;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 79446865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8457;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79446917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0018;AVGPOST=1.0000;RSQ=0.9879;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79447000 . GC G 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0004;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79447040 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7565;ERATE=0.0010;THETA=0.0075;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79447070 . AC A 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7423;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79447092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7475;ERATE=0.0005;THETA=0.0052;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79447186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79447224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0303;AVGPOST=0.9985;RSQ=0.9852;ERATE=0.0003;THETA=0.0093;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 79447325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79447531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8407;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79447626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79447679 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6398;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79447689 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7045;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79447733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79447776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79447834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7223;AVGPOST=0.9950;RSQ=0.9903;ERATE=0.0007;THETA=0.0003;AC=1578;AN=2184 GT:DS:GL:BD 0.72252744 1
1 79447948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1454;AVGPOST=0.9974;RSQ=0.9935;ERATE=0.0003;THETA=0.0006;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 79448000 . GA G 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0035;AVGPOST=0.9965;RSQ=0.6021;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79448234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.897;LDAF=0.0225;AVGPOST=0.9952;RSQ=0.9308;ERATE=0.0005;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 79448242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0424;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0008;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 79448284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79448475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1503;AVGPOST=0.9978;RSQ=0.9940;ERATE=0.0003;THETA=0.0018;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 79448483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6802;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79448505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5723;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79448595 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1194;AVGPOST=0.9976;RSQ=0.9921;ERATE=0.0004;THETA=0.0006;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 79448733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8923;AVGPOST=0.9974;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=1950;AN=2184 GT:DS:GL:BD 0.89285713 1
1 79448765 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.4085;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79448788 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8346;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79448808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9534;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79448830 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79448836 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79448933 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6846;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79448936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79448971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79449115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79449124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7951;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79449176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5484;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=1197;AN=2184 GT:DS:GL:BD 0.54807693 1
1 79449180 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1377;AVGPOST=0.9950;RSQ=0.9847;ERATE=0.0003;THETA=0.0002;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 79449453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9794;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79449528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79449631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7044;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=1538;AN=2184 GT:DS:GL:BD 0.70421243 1
1 79449644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79449674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1507;AVGPOST=0.9991;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=329;AN=2184 GT:DS:GL:BD 0.15064102 0
1 79449754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79449805 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1564;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=342;AN=2184 GT:DS:GL:BD 0.15659341 0
1 79449867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6473;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79449897 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9539;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79449976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9003;ERATE=0.0007;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79449996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2756;AVGPOST=0.9952;RSQ=0.9915;ERATE=0.0004;THETA=0.0002;AC=603;AN=2184 GT:DS:GL:BD 0.27609891 0
1 79450072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0680;AVGPOST=0.9979;RSQ=0.9863;ERATE=0.0003;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 79450092 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8548;ERATE=0.0007;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79450175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79450289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0025;AVGPOST=0.9970;RSQ=0.5850;ERATE=0.0003;THETA=0.0064;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79450366 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2779;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0003;THETA=0.0036;AC=606;AN=2184 GT:DS:GL:BD 0.27747253 0
1 79450400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6547;ERATE=0.0003;THETA=0.0037;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79450451 . CCTAA C 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79450531 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0039;AVGPOST=0.9994;RSQ=0.9372;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79450622 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8626;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79450660 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0090;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79450664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.8251;ERATE=0.0003;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79450804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79450890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0069;AVGPOST=0.9987;RSQ=0.9243;ERATE=0.0003;THETA=0.0037;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79450928 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5924;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79450954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79450966 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5020;AVGPOST=0.9892;RSQ=0.9843;ERATE=0.0024;THETA=0.0012;AC=1096;AN=2184 GT:DS:GL:BD 0.50183153 1
1 79451051 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8005;ERATE=0.0003;THETA=0.0041;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79451071 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5234;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79451376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.763;LDAF=0.0042;AVGPOST=0.9975;RSQ=0.7696;ERATE=0.0003;THETA=0.0017;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79451447 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79451486 . AATT A 33 PASS INDEL;BAVGPOST=0.994;BRSQ=0.606;LDAF=0.0133;AVGPOST=0.9827;RSQ=0.4778;ERATE=0.0042;THETA=0.0062;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79451511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9374;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79451600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6429;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79451607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8198;ERATE=0.0004;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79451677 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0051;AVGPOST=0.9981;RSQ=0.8457;ERATE=0.0004;THETA=0.0056;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79451806 . GCA G 130 PASS INDEL;BAVGPOST=0.986;BRSQ=0.649;LDAF=0.0295;AVGPOST=0.9700;RSQ=0.5855;ERATE=0.0141;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 79451900 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79451912 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2652;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=580;AN=2184 GT:DS:GL:BD 0.26556778 0
1 79451965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9860;ERATE=0.0002;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79451989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9444;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79452016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9149;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0027;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79452034 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.9147;AVGPOST=0.9994;RSQ=0.9977;ERATE=0.0002;THETA=0.0009;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 79452039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.7802;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79452057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.9146;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0003;THETA=0.0006;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 79452134 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0711;AVGPOST=0.9987;RSQ=0.9938;ERATE=0.0003;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 79452149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9145;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 79452271 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9142;AVGPOST=0.9991;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 79452311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9144;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 79452327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.870;LDAF=0.0118;AVGPOST=0.9965;RSQ=0.8760;ERATE=0.0005;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 79452387 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.9134;AVGPOST=0.9988;RSQ=0.9939;ERATE=0.0004;THETA=0.0007;AC=1995;AN=2184 GT:DS:GL:BD 0.91346157 1
1 79452393 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9905;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79452427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8438;ERATE=0.0006;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79452448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7739;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79452454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9144;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0012;AC=1997;AN=2184 GT:DS:GL:BD 0.91437727 1
1 79452471 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5584;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79452488 . CAA C 309 PASS INDEL;BAVGPOST=0.998;BRSQ=0.735;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8425;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79452506 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0303;AVGPOST=0.9983;RSQ=0.9776;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 79452513 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6944;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79452514 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5918;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79452525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.9143;AVGPOST=0.9986;RSQ=0.9934;ERATE=0.0004;THETA=0.0005;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79452544 rs112157406 T TA 63688 PASS INDEL;BAVGPOST=0.988;BRSQ=0.934;LDAF=0.9031;AVGPOST=0.9824;RSQ=0.9262;ERATE=0.0024;THETA=0.0004;AC=1981;AN=2184 GT:DS:GL:BD 0.90705127 1
1 79452550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9147;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0003;THETA=0.0020;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79452657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0032;AVGPOST=0.9967;RSQ=0.6011;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79452770 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5406;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79452790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.9852;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0003;THETA=0.0011;AC=2152;AN=2184 GT:DS:GL:BD 0.98534799 1
1 79452936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9012;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79453011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9146;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0003;THETA=0.0007;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79453120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9138;AVGPOST=0.9986;RSQ=0.9926;ERATE=0.0003;THETA=0.0006;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 79453131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.4442;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79453139 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5056;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79453146 rs11455097 G GA 83076 PASS INDEL;BAVGPOST=0.995;BRSQ=0.973;LDAF=0.9122;AVGPOST=0.9942;RSQ=0.9747;ERATE=0.0007;THETA=0.0006;AC=1995;AN=2184 GT:DS:GL:BD 0.91346157 1
1 79453217 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0706;AVGPOST=0.9994;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 79453389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9144;AVGPOST=0.9987;RSQ=0.9932;ERATE=0.0004;THETA=0.0003;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79453405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7785;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79453445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0704;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 79453570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5959;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79453637 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79453652 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79453690 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0034;AVGPOST=0.9989;RSQ=0.8618;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79453752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0277;AVGPOST=0.9986;RSQ=0.9789;ERATE=0.0004;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 79453795 . G GA 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6000;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79453835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9147;AVGPOST=0.9992;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79453881 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0218;AVGPOST=0.9993;RSQ=0.9847;ERATE=0.0004;THETA=0.0012;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 79453890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0030;AVGPOST=0.9988;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79453925 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9150;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79454021 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.9901;AVGPOST=0.9984;RSQ=0.9292;ERATE=0.0005;THETA=0.0003;AC=2164;AN=2184 GT:DS:GL:BD 0.99084246 1
1 79454063 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.880;LDAF=0.8485;AVGPOST=0.9479;RSQ=0.8452;ERATE=0.0146;THETA=0.0005;AC=1876;AN=2184 GT:DS:GL:BD 0.85897434 1
1 79454065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.5946;ERATE=0.0004;THETA=0.0034;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79454114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0250;AVGPOST=0.9990;RSQ=0.9815;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 79454126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5306;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79454291 . AG A 11 PASS INDEL;BAVGPOST=0.989;BRSQ=0.457;LDAF=0.0083;AVGPOST=0.9910;RSQ=0.5590;ERATE=0.0017;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79454346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0130;AVGPOST=0.9982;RSQ=0.9391;ERATE=0.0005;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 79454374 . AATTGAAATAAATT A 841 PASS INDEL;BAVGPOST=0.996;BRSQ=0.693;LDAF=0.0123;AVGPOST=0.9916;RSQ=0.7203;ERATE=0.0005;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79454534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.970;LDAF=0.5835;AVGPOST=0.9923;RSQ=0.9866;ERATE=0.0010;THETA=0.0005;AC=1273;AN=2184 GT:DS:GL:BD 0.58287543 1
1 79454537 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0162;AVGPOST=0.9964;RSQ=0.9032;ERATE=0.0006;THETA=0.0024;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 79454572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9141;AVGPOST=0.9980;RSQ=0.9899;ERATE=0.0006;THETA=0.0003;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79454663 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9142;AVGPOST=0.9983;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79454696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9134;AVGPOST=0.9978;RSQ=0.9892;ERATE=0.0004;THETA=0.0009;AC=1996;AN=2184 GT:DS:GL:BD 0.91391939 1
1 79454738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2115;AVGPOST=0.9975;RSQ=0.9937;ERATE=0.0005;THETA=0.0008;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 79454751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79454804 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9990;RSQ=0.9291;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 79454866 . AT A 46 PASS INDEL;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0068;AVGPOST=0.9953;RSQ=0.7288;ERATE=0.0006;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79454866 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5237;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79454884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.9128;AVGPOST=0.9971;RSQ=0.9868;ERATE=0.0005;THETA=0.0005;AC=1995;AN=2184 GT:DS:GL:BD 0.91346157 1
1 79454947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0073;AVGPOST=0.9984;RSQ=0.9202;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 79454961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2117;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 79455003 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.1244;AVGPOST=0.9957;RSQ=0.9840;ERATE=0.0004;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 79455024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9149;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79455044 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9149;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0002;THETA=0.0003;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79455110 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0249;AVGPOST=0.9994;RSQ=0.9886;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 79455143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9994;RSQ=0.9791;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79455234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9095;AVGPOST=0.9906;RSQ=0.9603;ERATE=0.0020;THETA=0.0004;AC=1992;AN=2184 GT:DS:GL:BD 0.91208792 1
1 79455280 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0145;AVGPOST=0.9984;RSQ=0.9647;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 79455326 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9156;AVGPOST=0.9990;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=2000;AN=2184 GT:DS:GL:BD 0.91575092 1
1 79455330 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9148;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79455418 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9149;AVGPOST=0.9995;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79455423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8809;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 79455497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.906;LDAF=0.0101;AVGPOST=0.9989;RSQ=0.9612;ERATE=0.0002;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 79455582 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9146;AVGPOST=0.9991;RSQ=0.9954;ERATE=0.0003;THETA=0.0007;AC=1998;AN=2184 GT:DS:GL:BD 0.91483516 1
1 79455583 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7719;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79455601 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2823;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 79455619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3356;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0003;THETA=0.0010;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 79455728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6661;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79455832 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6225;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79456009 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9645;ERATE=0.0002;THETA=0.0014;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79456062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0029;AVGPOST=0.9993;RSQ=0.9021;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79456307 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5914;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 79456436 . AT A 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4412;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79456442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5587;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79456490 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0271;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0003;THETA=0.0005;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 79456494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5813;AVGPOST=0.9973;RSQ=0.9960;ERATE=0.0004;THETA=0.0006;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 79456683 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4859;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79456711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.3422;AVGPOST=0.9942;RSQ=0.9888;ERATE=0.0010;THETA=0.0003;AC=748;AN=2184 GT:DS:GL:BD 0.34249085 0
1 79456799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6328;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79456930 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79456935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0093;AVGPOST=0.9984;RSQ=0.9330;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79456962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7528;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79457036 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4713;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79457177 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4879;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79457218 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9282;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79457234 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79457256 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0039;AVGPOST=0.9973;RSQ=0.7006;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79457309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6458;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79457356 rs60595261 G GT 47693 PASS INDEL;BAVGPOST=0.991;BRSQ=0.987;LDAF=0.5781;AVGPOST=0.9895;RSQ=0.9820;ERATE=0.0005;THETA=0.0004;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 79457413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0022;AVGPOST=0.9984;RSQ=0.7301;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79457445 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9133;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79457450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9331;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 79457529 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7916;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79457608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.7023;ERATE=0.0005;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79457675 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8403;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79457751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0493;AVGPOST=0.9990;RSQ=0.9913;ERATE=0.0003;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 79457770 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4369;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79458072 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79458098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0359;AVGPOST=0.9973;RSQ=0.9700;ERATE=0.0005;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 79458108 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5469;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79458152 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5938;ERATE=0.0006;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79458663 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7847;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79458761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8460;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79458831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5029;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79458944 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0166;AVGPOST=0.9974;RSQ=0.9359;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 79459122 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0392;AVGPOST=0.9970;RSQ=0.9690;ERATE=0.0004;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 79459222 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6453;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79459482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8501;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79459491 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8363;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79459531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8749;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 79459594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79459886 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79460173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79460247 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8100;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79460286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79460361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8494;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79460443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6274;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79460512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79460567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.5459;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79460568 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79460633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7140;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79460667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7048;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79460995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79461036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6065;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79461158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0066;AVGPOST=0.9988;RSQ=0.9307;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79461256 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0036;AVGPOST=0.9981;RSQ=0.7964;ERATE=0.0005;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79461276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0157;AVGPOST=0.9993;RSQ=0.9816;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 79461395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0945;AVGPOST=0.9955;RSQ=0.9787;ERATE=0.0003;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 79461492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7242;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79461511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9591;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 79461536 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0493;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 79461556 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5356;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79461647 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6121;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79461656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8577;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79461666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9996;RSQ=0.9003;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79461704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5757;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79461809 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9996;RSQ=0.9886;ERATE=0.0004;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 79461831 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.679;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4436;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79461941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5112;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79461965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7209;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79462043 . TCAA T 4 PASS INDEL;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0020;AVGPOST=0.9984;RSQ=0.6532;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79462059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0967;AVGPOST=0.9973;RSQ=0.9885;ERATE=0.0006;THETA=0.0002;AC=210;AN=2184 GT:DS:GL:BD 0.09615385 0
1 79462286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6999;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 79462341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4562;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79462355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7096;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79462409 rs5776747 GAT G 40791 PASS INDEL;BAVGPOST=0.982;BRSQ=0.974;LDAF=0.5606;AVGPOST=0.9753;RSQ=0.9664;ERATE=0.0025;THETA=0.0007;AC=1220;AN=2184 GT:DS:GL:BD 0.55860806 1
1 79462540 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.957;LDAF=0.3046;AVGPOST=0.9601;RSQ=0.9316;ERATE=0.0051;THETA=0.0006;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 79462584 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.953;LDAF=0.1427;AVGPOST=0.9837;RSQ=0.9501;ERATE=0.0019;THETA=0.0003;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 79462685 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.554;LDAF=0.0070;AVGPOST=0.9919;RSQ=0.5652;ERATE=0.0009;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79462694 . T TA 141 PASS INDEL;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0048;AVGPOST=0.9969;RSQ=0.7088;ERATE=0.0007;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 79462707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.686;LDAF=0.0136;AVGPOST=0.9944;RSQ=0.8225;ERATE=0.0009;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 79462821 . TTATATC T 347 PASS INDEL;BAVGPOST=0.998;BRSQ=0.633;LDAF=0.0043;AVGPOST=0.9962;RSQ=0.6172;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79462956 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9677;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 79463117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0815;AVGPOST=0.9972;RSQ=0.9856;ERATE=0.0007;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 79463339 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6397;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79463352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5001;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79463377 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0083;AVGPOST=0.9988;RSQ=0.9472;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 79463422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0814;AVGPOST=0.9980;RSQ=0.9910;ERATE=0.0003;THETA=0.0002;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 79463426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.845;LDAF=0.0110;AVGPOST=0.9945;RSQ=0.8177;ERATE=0.0004;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 79463443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0027;AVGPOST=0.9961;RSQ=0.4871;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79463619 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3471;AVGPOST=0.9969;RSQ=0.9945;ERATE=0.0009;THETA=0.0003;AC=756;AN=2184 GT:DS:GL:BD 0.34615386 0
1 79463720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.7761;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79463775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4071;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79463779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0032;AVGPOST=0.9956;RSQ=0.4542;ERATE=0.0006;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79463936 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0951;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 79463979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0809;AVGPOST=0.9986;RSQ=0.9927;ERATE=0.0004;THETA=0.0003;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 79463999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0957;AVGPOST=0.9985;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 79464051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0030;AVGPOST=0.9993;RSQ=0.8878;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 79464078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79464093 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8131;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 79464113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9372;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 79464151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0044;AVGPOST=0.9943;RSQ=0.5098;ERATE=0.0016;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 79464201 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79464213 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6535;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 79464227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0060;AVGPOST=0.9974;RSQ=0.8432;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 79464549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0951;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 79464561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0806;AVGPOST=0.9976;RSQ=0.9878;ERATE=0.0005;THETA=0.0002;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 79464584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0945;AVGPOST=0.9991;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 79464628 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5095;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 79464638 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0071;AVGPOST=0.9977;RSQ=0.8689;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 79464692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0845;AVGPOST=0.9979;RSQ=0.9894;ERATE=0.0003;THETA=0.0008;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 79464696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9832;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0