# Ome Data File Format (ODFF) Readme recommended by Genome Research Foundation

File name : KPGP4_G_110915_HiSeq_EastAsian_Kor_F

Sample ID : KPGP_00004

Other IDs : TGP2011D0016

Sample type : Genomic DNA

Tissue type : Blood

Data Publication Date: 2011.9.15

Sequencing platform : Illumina, HiSeq2000

Ethnic Group : EastAsian

Nationality : Kor

Gender : F

Brith Date : N/A
 
Dieases : N/A

Name : N/A

Data depository: ftp://bioftp.org/BiO/Distribute/Open-KPGP/TGP2011D0016/

Project name: KPGP

Reference: UCSC, HG19

Contact email: jongbhak@yahoo.com

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Data analysis tool information

- Rawdata	    fastq

- mapping result    bwa(0.5.9)

- SNV	            samtools(0.1.16)

- INDEL	            samtools(0.1.16)

- SV	            breakdancer (1.1)

- NSSNV	            GRF's pipeline

- CNV               N/A

- STATISTICS	    GRF's pipeline