1092
10000
1 233967542 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5520;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233967552 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8199;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233967566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6225;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 233967611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9552;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233967654 . GTC G 13 PASS INDEL;BAVGPOST=0.996;BRSQ=0.572;LDAF=0.0035;AVGPOST=0.9953;RSQ=0.4896;ERATE=0.0010;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233967660 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2793;AVGPOST=0.9940;RSQ=0.9874;ERATE=0.0004;THETA=0.0002;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 233967822 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6237;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233967823 . TTATC T 266 PASS INDEL;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9036;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233967861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7875;AVGPOST=0.9985;RSQ=0.9965;ERATE=0.0004;THETA=0.0004;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233967913 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233967959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5338;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233967964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6324;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233968000 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7877;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233968033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.605;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4986;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233968056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233968095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8368;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233968168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.783;LDAF=0.0037;AVGPOST=0.9979;RSQ=0.7914;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233968187 rs35729947 C CAG 87902 PASS INDEL;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.7548;AVGPOST=0.9532;RSQ=0.9077;ERATE=0.0127;THETA=0.0002;AC=1658;AN=2184 GT:DS:GL:BD 0.75915754 1
1 233968234 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0031;AVGPOST=0.9986;RSQ=0.8341;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233968263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6745;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233968326 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7877;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233968354 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9206;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233968403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7877;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233968420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.7443;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=1625;AN=2184 GT:DS:GL:BD 0.74404764 1
1 233968447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0340;AVGPOST=0.9991;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 233968499 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0138;AVGPOST=0.9996;RSQ=0.9873;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233968586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7518;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233968603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9999;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233968603 . C CTT 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233968608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.6117;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233968644 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233968708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233968747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233968834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9997;RSQ=0.0664;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233968876 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8964;ERATE=0.0002;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233968909 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0394;AVGPOST=0.9997;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233968964 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233969190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7220;ERATE=0.0004;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233969275 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8088;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233969302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8061;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233969312 . CT C 213 PASS INDEL;BAVGPOST=0.997;BRSQ=0.671;LDAF=0.0049;AVGPOST=0.9963;RSQ=0.6664;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233969317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7835;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233969320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7299;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233969457 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.506;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5467;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233969489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7211;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233969540 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.6816;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233969629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7871;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0004;THETA=0.0002;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233969631 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7841;AVGPOST=0.9951;RSQ=0.9894;ERATE=0.0007;THETA=0.0005;AC=1713;AN=2184 GT:DS:GL:BD 0.78434068 1
1 233969727 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.961;LDAF=0.3834;AVGPOST=0.9905;RSQ=0.9836;ERATE=0.0004;THETA=0.0003;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 233969768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5218;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233969769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.7802;AVGPOST=0.9898;RSQ=0.9779;ERATE=0.0010;THETA=0.0003;AC=1706;AN=2184 GT:DS:GL:BD 0.78113556 1
1 233969850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9983;RSQ=0.8452;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233969863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.949;LDAF=0.7548;AVGPOST=0.9660;RSQ=0.9324;ERATE=0.0024;THETA=0.0004;AC=1666;AN=2184 GT:DS:GL:BD 0.76282054 1
1 233969867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0038;AVGPOST=0.9976;RSQ=0.7590;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233969872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.955;LDAF=0.7085;AVGPOST=0.9594;RSQ=0.9283;ERATE=0.0054;THETA=0.0008;AC=1567;AN=2184 GT:DS:GL:BD 0.71749085 1
1 233969905 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.5959;AVGPOST=0.9692;RSQ=0.9543;ERATE=0.0039;THETA=0.0008;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 233969967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7868;AVGPOST=0.9973;RSQ=0.9934;ERATE=0.0006;THETA=0.0002;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233969991 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0436;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0004;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233969999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0020;AVGPOST=0.9981;RSQ=0.6720;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233970005 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7874;AVGPOST=0.9973;RSQ=0.9938;ERATE=0.0006;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233970057 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7875;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233970065 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0045;AVGPOST=0.9981;RSQ=0.8219;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233970180 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1755;AVGPOST=0.9954;RSQ=0.9875;ERATE=0.0004;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 233970186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.860;LDAF=0.0105;AVGPOST=0.9963;RSQ=0.8727;ERATE=0.0004;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233970257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0037;AVGPOST=0.9958;RSQ=0.5616;ERATE=0.0009;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233970330 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.755;LDAF=0.0413;AVGPOST=0.9845;RSQ=0.8539;ERATE=0.0003;THETA=0.0002;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 233970530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.450;LDAF=0.0081;AVGPOST=0.9919;RSQ=0.5728;ERATE=0.0014;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233970796 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8623;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233971007 . CT C 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0033;AVGPOST=0.9974;RSQ=0.6552;ERATE=0.0005;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233971046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233971093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.802;LDAF=0.9942;AVGPOST=0.9977;RSQ=0.8163;ERATE=0.0004;THETA=0.0005;AC=2173;AN=2184 GT:DS:GL:BD 0.99496335 1
1 233971211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0435;AVGPOST=0.9998;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233971481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0436;AVGPOST=0.9995;RSQ=0.9948;ERATE=0.0002;THETA=0.0009;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233971513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 233972099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0087;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233972285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.873;BRSQ=0.760;LDAF=0.4249;AVGPOST=0.9682;RSQ=0.9480;ERATE=0.0008;THETA=0.0004;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 233972408 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.902;BRSQ=0.807;LDAF=0.3987;AVGPOST=0.8071;RSQ=0.6772;ERATE=0.0155;THETA=0.0002;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 233972416 . TTA T 111 PASS INDEL;BAVGPOST=0.982;BRSQ=0.166;LDAF=0.0803;AVGPOST=0.8789;RSQ=0.3443;ERATE=0.0092;THETA=0.0003;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 233972689 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.856;LDAF=0.0154;AVGPOST=0.9963;RSQ=0.9129;ERATE=0.0003;THETA=0.0012;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 233972726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233972825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7567;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233972826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4575;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233972866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.7474;AVGPOST=0.9953;RSQ=0.9909;ERATE=0.0007;THETA=0.0007;AC=1629;AN=2184 GT:DS:GL:BD 0.74587911 1
1 233972918 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0047;AVGPOST=0.9949;RSQ=0.5695;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233972926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.965;LDAF=0.5995;AVGPOST=0.9452;RSQ=0.9171;ERATE=0.0101;THETA=0.0002;AC=1324;AN=2184 GT:DS:GL:BD 0.60622710 1
1 233972926 . A AG 5551 PASS INDEL;BAVGPOST=0.805;BRSQ=0.696;LDAF=0.4787;AVGPOST=0.7797;RSQ=0.6887;ERATE=0.0364;THETA=0.0012;AC=1111;AN=2184 GT:DS:GL:BD 0.50869966 1
1 233972931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0409;AVGPOST=0.9975;RSQ=0.9737;ERATE=0.0004;THETA=0.0031;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 233973077 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6188;AVGPOST=0.9931;RSQ=0.9886;ERATE=0.0014;THETA=0.0004;AC=1351;AN=2184 GT:DS:GL:BD 0.61858976 1
1 233973145 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0088;AVGPOST=0.9989;RSQ=0.9422;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233973203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233973243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0041;AVGPOST=0.9952;RSQ=0.5459;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233973244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9542;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233973309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4942;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233973360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9327;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233973366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9577;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233973451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4354;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233973489 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.895;LDAF=0.0103;AVGPOST=0.9963;RSQ=0.8725;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233973584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.8053;AVGPOST=0.9936;RSQ=0.9834;ERATE=0.0009;THETA=0.0004;AC=1760;AN=2184 GT:DS:GL:BD 0.80586082 1
1 233973718 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7321;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233973729 rs11304098 TA T 28859 PASS INDEL;BAVGPOST=0.991;BRSQ=0.986;LDAF=0.4366;AVGPOST=0.9788;RSQ=0.9666;ERATE=0.0032;THETA=0.0002;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 233973743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0012;AVGPOST=0.9981;RSQ=0.3919;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233973802 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3885;AVGPOST=0.9935;RSQ=0.9885;ERATE=0.0007;THETA=0.0005;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 233973928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233973931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974032 . CAT C 629 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9091;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233974095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1217;AVGPOST=0.9984;RSQ=0.9933;ERATE=0.0004;THETA=0.0004;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 233974331 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9339;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233974384 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.952;LDAF=0.0999;AVGPOST=0.9847;RSQ=0.9386;ERATE=0.0008;THETA=0.0004;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 233974420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5572;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9987;RSQ=0.9595;ERATE=0.0004;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233974563 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9434;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233974579 . CA C 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4511;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974610 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9731;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233974758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974843 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0032;AVGPOST=0.9985;RSQ=0.7980;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233974892 . GT G 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.4116;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233974951 . A AAAAG 5616 PASS INDEL;BAVGPOST=0.958;BRSQ=0.682;LDAF=0.0927;AVGPOST=0.9524;RSQ=0.7820;ERATE=0.0082;THETA=0.0002;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 233975002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233975238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0131;AVGPOST=0.9982;RSQ=0.9414;ERATE=0.0005;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233975327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5301;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233975384 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9059;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233975459 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9989;RSQ=0.9335;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233975606 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233975759 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0067;AVGPOST=0.9970;RSQ=0.8211;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233975762 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0026;AVGPOST=0.9967;RSQ=0.5674;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233976065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233976170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9990;RSQ=0.9698;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 233976367 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8756;ERATE=0.0004;THETA=0.0010;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233976471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7879;AVGPOST=0.9944;RSQ=0.9871;ERATE=0.0008;THETA=0.0003;AC=1720;AN=2184 GT:DS:GL:BD 0.78754580 1
1 233976493 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5672;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233976515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.3716;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233976552 . CA C 649 PASS INDEL;BAVGPOST=0.995;BRSQ=0.834;LDAF=0.0100;AVGPOST=0.9952;RSQ=0.8007;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233976634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9985;RSQ=0.8870;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233976729 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1763;AVGPOST=0.9967;RSQ=0.9904;ERATE=0.0006;THETA=0.0010;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 233976778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5491;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233976851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7838;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233976885 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8313;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233976889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5471;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233976963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0093;AVGPOST=0.9986;RSQ=0.9425;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 233976997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4582;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233977084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8821;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233977152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0202;AVGPOST=0.9988;RSQ=0.9787;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 233977165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5358;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233977234 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5994;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233977256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7647;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233977303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6612;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233977366 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9614;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233977397 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9453;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233977495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8518;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233977556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.4351;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233977595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0054;AVGPOST=0.9997;RSQ=0.9733;ERATE=0.0002;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233977652 . G GA 44 PASS INDEL;BAVGPOST=0.996;BRSQ=0.373;LDAF=0.0062;AVGPOST=0.9910;RSQ=0.4184;ERATE=0.0027;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233977666 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0123;AVGPOST=0.9993;RSQ=0.9757;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233977701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5394;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233977702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6132;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233977714 . ACT A 222 PASS INDEL;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8776;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233977734 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233977783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8209;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233977815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233977981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.903;LDAF=0.0105;AVGPOST=0.9976;RSQ=0.9097;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233978100 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233978101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7507;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233978115 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0002;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233978146 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0064;AVGPOST=0.9982;RSQ=0.8810;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233978168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0110;AVGPOST=0.9976;RSQ=0.9309;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233978197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233978260 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233978310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9979;RSQ=0.8750;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233978353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8635;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233978362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233978410 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7773;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233978433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6675;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233978460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9395;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233978524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233978602 . TA T 74 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6500;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233978614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0013;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233978796 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8516;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233978856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9767;ERATE=0.0002;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233978895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.858;LDAF=0.0097;AVGPOST=0.9981;RSQ=0.9218;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 233979016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233979122 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1672;AVGPOST=0.9961;RSQ=0.9896;ERATE=0.0004;THETA=0.0003;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 233979126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233979152 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6695;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233979214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3875;AVGPOST=0.9885;RSQ=0.9803;ERATE=0.0012;THETA=0.0005;AC=844;AN=2184 GT:DS:GL:BD 0.38644689 0
1 233979245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0096;AVGPOST=0.9994;RSQ=0.9680;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233979284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7457;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233979326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.678;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6054;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233979347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233979372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.7076;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233979405 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233979438 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0110;AVGPOST=0.9978;RSQ=0.9147;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233979558 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9938;ERATE=0.0002;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233979608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8483;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233979853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7198;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233979878 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233979927 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233980026 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0021;AVGPOST=0.9990;RSQ=0.8196;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233980043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7383;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233980108 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0161;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0002;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233980144 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0002;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980151 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5238;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980216 . TCTCA T 1350 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0099;AVGPOST=0.9989;RSQ=0.9513;ERATE=0.0002;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 233980257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233980322 . C CT 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980343 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0126;AVGPOST=0.9994;RSQ=0.9789;ERATE=0.0004;THETA=0.0005;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233980370 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980394 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5910;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233980483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8256;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233980541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0002;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233980768 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1125;AVGPOST=0.9948;RSQ=0.9800;ERATE=0.0004;THETA=0.0006;AC=245;AN=2184 GT:DS:GL:BD 0.11217949 0
1 233980787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7845;ERATE=0.0002;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233980956 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6819;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233981021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0062;AVGPOST=0.9980;RSQ=0.8856;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233981095 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8247;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233981173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8781;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233981218 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5273;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233981230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7041;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233981315 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.7100;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233981329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233981355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0340;AVGPOST=0.9971;RSQ=0.9661;ERATE=0.0005;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 233981435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.671;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233981714 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233981718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9469;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233981727 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233981728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9161;ERATE=0.0004;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233981736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8604;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233981813 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.912;LDAF=0.0110;AVGPOST=0.9977;RSQ=0.9178;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233981916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0003;AVGPOST=0.9994;RSQ=0.3673;ERATE=0.0004;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233981943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7513;ERATE=0.0004;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233982024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1242;AVGPOST=0.9979;RSQ=0.9924;ERATE=0.0003;THETA=0.0002;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 233982213 . TC T 175 PASS INDEL;BAVGPOST=0.998;BRSQ=0.824;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8330;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233982252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5547;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233982278 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9401;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233982380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6171;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233982590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.938;LDAF=0.0139;AVGPOST=0.9970;RSQ=0.9144;ERATE=0.0009;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 233982611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233982620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5880;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233982641 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9110;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233982691 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7358;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233982844 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0081;AVGPOST=0.9983;RSQ=0.9125;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233982858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233982872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8909;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233982915 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.888;LDAF=0.0395;AVGPOST=0.9906;RSQ=0.9021;ERATE=0.0003;THETA=0.0009;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 233982944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9595;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233982970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233982976 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7957;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233983035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983117 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0080;AVGPOST=0.9984;RSQ=0.9148;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 233983141 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0003;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9276;ERATE=0.0002;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983247 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9027;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5792;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233983335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233983401 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5650;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233983506 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9738;ERATE=0.0002;THETA=0.0023;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983612 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0002;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233983780 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983895 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0088;AVGPOST=0.9950;RSQ=0.7701;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233983901 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983917 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233983928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233983945 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9557;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233984021 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7257;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233984023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9635;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233984059 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9634;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233984089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7771;ERATE=0.0002;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233984105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0195;AVGPOST=0.9991;RSQ=0.9836;ERATE=0.0002;THETA=0.0012;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 233984122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.953;LDAF=0.0406;AVGPOST=0.9971;RSQ=0.9716;ERATE=0.0002;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 233984264 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.8816;ERATE=0.0004;THETA=0.0010;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233984376 . ACT A 32 PASS INDEL;BAVGPOST=0.998;BRSQ=0.668;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7609;ERATE=0.0003;THETA=0.0044;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233984409 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233984422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8819;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233984423 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0319;AVGPOST=0.9973;RSQ=0.9671;ERATE=0.0003;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233984584 . G GA 28 PASS INDEL;BAVGPOST=0.999;BRSQ=0.489;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5174;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233984634 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233984765 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233984772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233984886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233984887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233984957 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9747;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233985043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1595;AVGPOST=0.9968;RSQ=0.9909;ERATE=0.0004;THETA=0.0009;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 233985056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0002;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233985071 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233985114 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4235;AVGPOST=0.9963;RSQ=0.9937;ERATE=0.0004;THETA=0.0007;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 233985154 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233985216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0029;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233985228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1203;AVGPOST=0.9975;RSQ=0.9915;ERATE=0.0003;THETA=0.0020;AC=264;AN=2184 GT:DS:GL:BD 0.12087912 0
1 233985259 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9267;ERATE=0.0003;THETA=0.0041;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233985263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233985274 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1194;AVGPOST=0.9957;RSQ=0.9851;ERATE=0.0003;THETA=0.0011;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 233985295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233985320 . TGAG T 2139 PASS INDEL;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0158;AVGPOST=0.9993;RSQ=0.9806;ERATE=0.0002;THETA=0.0026;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 233985324 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.4055;AVGPOST=0.9930;RSQ=0.9884;ERATE=0.0005;THETA=0.0072;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 233985354 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233985357 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0002;THETA=0.0067;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 233985449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.666;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7315;ERATE=0.0002;THETA=0.0257;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233985489 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9668;ERATE=0.0003;THETA=0.0078;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233985612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9016;ERATE=0.0002;THETA=0.0156;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233985683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233985832 rs57899271 GA G 896 PASS INDEL;BAVGPOST=0.978;BRSQ=0.693;LDAF=0.0357;AVGPOST=0.9654;RSQ=0.6173;ERATE=0.0076;THETA=0.0050;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 233985864 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9040;ERATE=0.0002;THETA=0.0075;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233986003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0108;AVGPOST=0.9990;RSQ=0.9627;ERATE=0.0003;THETA=0.0208;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233986263 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.778;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7326;ERATE=0.0003;THETA=0.0050;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233986306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0150;AVGPOST=0.9978;RSQ=0.9426;ERATE=0.0003;THETA=0.0116;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 233986393 . GT G 879 PASS INDEL;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0143;AVGPOST=0.9985;RSQ=0.9585;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233986426 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9818;ERATE=0.0002;THETA=0.0048;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233986468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9111;ERATE=0.0004;THETA=0.0027;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233986531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233986576 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0061;AVGPOST=0.9994;RSQ=0.9509;ERATE=0.0002;THETA=0.0170;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233986579 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1338;AVGPOST=0.9948;RSQ=0.9833;ERATE=0.0004;THETA=0.0009;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 233986603 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7185;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233986657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9765;ERATE=0.0003;THETA=0.0015;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233986776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0771;AVGPOST=0.9974;RSQ=0.9878;ERATE=0.0002;THETA=0.0050;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 233986809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.675;LDAF=0.0083;AVGPOST=0.9941;RSQ=0.7185;ERATE=0.0005;THETA=0.0012;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233986817 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0037;AVGPOST=0.9977;RSQ=0.7278;ERATE=0.0006;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233986839 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.500;LDAF=0.0101;AVGPOST=0.9909;RSQ=0.6195;ERATE=0.0007;THETA=0.0024;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 233986869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0189;AVGPOST=0.9942;RSQ=0.8699;ERATE=0.0009;THETA=0.0039;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 233986976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0050;AVGPOST=0.9943;RSQ=0.5657;ERATE=0.0005;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233987066 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0783;AVGPOST=0.9980;RSQ=0.9902;ERATE=0.0004;THETA=0.0021;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 233987114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9891;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233987306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6632;ERATE=0.0005;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233987332 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9218;ERATE=0.0002;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233987433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.741;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233987535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233987565 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233987588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0477;AVGPOST=0.9978;RSQ=0.9811;ERATE=0.0004;THETA=0.0023;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 233987595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0345;AVGPOST=0.9994;RSQ=0.9924;ERATE=0.0002;THETA=0.0008;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 233987602 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9096;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233987606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1315;AVGPOST=0.9973;RSQ=0.9906;ERATE=0.0005;THETA=0.0027;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 233987771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0109;AVGPOST=0.9993;RSQ=0.9706;ERATE=0.0003;THETA=0.0007;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233987774 . ATTCT A 1765 PASS INDEL;BAVGPOST=0.996;BRSQ=0.920;LDAF=0.0128;AVGPOST=0.9984;RSQ=0.9462;ERATE=0.0003;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 233987866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0065;AVGPOST=0.9989;RSQ=0.9329;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233987890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9455;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233988285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1881;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=411;AN=2184 GT:DS:GL:BD 0.18818681 0
1 233988319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5492;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233988320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7928;ERATE=0.0002;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233988328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0520;AVGPOST=0.9986;RSQ=0.9886;ERATE=0.0003;THETA=0.0009;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 233988340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7347;ERATE=0.0002;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233988366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6903;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233988394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1311;AVGPOST=0.9988;RSQ=0.9958;ERATE=0.0004;THETA=0.0016;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 233988497 . C CA 164 PASS INDEL;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0038;AVGPOST=0.9978;RSQ=0.8112;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233988508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233988524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233988569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7298;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233988592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233988719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8497;ERATE=0.0002;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233989049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6122;ERATE=0.0002;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1311;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0003;THETA=0.0012;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 233989140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6946;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233989147 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.6289;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233989205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7315;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233989231 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9540;ERATE=0.0002;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233989245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.780;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8441;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233989285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.643;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7031;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233989311 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3938;AVGPOST=0.9839;RSQ=0.9731;ERATE=0.0019;THETA=0.0002;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 233989331 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0068;AVGPOST=0.9979;RSQ=0.8503;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233989347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0120;AVGPOST=0.9973;RSQ=0.9134;ERATE=0.0006;THETA=0.0010;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233989401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5726;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6927;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233989594 . CA C 131 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9465;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233989597 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9289;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233989642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1307;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0005;THETA=0.0005;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 233989655 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.4092;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6141;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233989807 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233989888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.953;LDAF=0.0324;AVGPOST=0.9988;RSQ=0.9826;ERATE=0.0005;THETA=0.0007;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 233989952 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9501;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233989953 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233990249 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.9151;ERATE=0.0002;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233990325 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233990378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233990456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233990546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8320;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233990566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9998;RSQ=0.9967;ERATE=0.0002;THETA=0.0005;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233990775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9013;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233990908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233990972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8360;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233991001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6114;AVGPOST=0.9968;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 233991023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233991050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3680;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0010;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 233991064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233991075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.8978;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233991212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0050;AVGPOST=0.9987;RSQ=0.8899;ERATE=0.0004;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 233991252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6493;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233991420 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=1.0000;RSQ=0.9995;ERATE=0.0002;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 233991470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8549;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233991489 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0473;AVGPOST=0.9994;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 233991579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9583;ERATE=0.0003;THETA=0.0010;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233991725 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0316;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0009;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233991748 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9359;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233991766 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0315;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0002;THETA=0.0003;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233991802 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 233991803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6197;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233991847 rs34387179 T TCA 78950 PASS INDEL;BAVGPOST=0.975;BRSQ=0.958;LDAF=0.6082;AVGPOST=0.9798;RSQ=0.9713;ERATE=0.0005;THETA=0.0005;AC=1333;AN=2184 GT:DS:GL:BD 0.61034799 1
1 233991848 rs67630687 C CAT 22483 PASS INDEL;BAVGPOST=0.967;BRSQ=0.939;LDAF=0.5886;AVGPOST=0.9530;RSQ=0.9318;ERATE=0.0059;THETA=0.0003;AC=1300;AN=2184 GT:DS:GL:BD 0.59523809 1
1 233991849 rs72515907 A ACG 34232 PASS INDEL;BAVGPOST=0.968;BRSQ=0.941;LDAF=0.5913;AVGPOST=0.9553;RSQ=0.9350;ERATE=0.0063;THETA=0.0005;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 233991850 rs36073365 C CA 12287 PASS INDEL;BAVGPOST=0.939;BRSQ=0.883;LDAF=0.5150;AVGPOST=0.8824;RSQ=0.8186;ERATE=0.0426;THETA=0.0003;AC=1161;AN=2184 GT:DS:GL:BD 0.53159338 1
1 233991863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0415;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0002;THETA=0.0009;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 233991989 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9762;ERATE=0.0002;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233991990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8742;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233991998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233992112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7960;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233992129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 233992130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1319;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0004;THETA=0.0004;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 233992342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0002;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 233992359 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233992402 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7813;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233992410 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0413;AVGPOST=0.9994;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 233992477 . GTA G 7680 PASS INDEL;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0802;AVGPOST=0.9977;RSQ=0.9876;ERATE=0.0006;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 233992512 . CAT C 293 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8898;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233992778 . C CAT 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.5841;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233992812 . A AT 173 PASS INDEL;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0038;AVGPOST=0.9979;RSQ=0.7718;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233992966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1237;AVGPOST=0.9933;RSQ=0.9775;ERATE=0.0005;THETA=0.0011;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 233992967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6798;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233993010 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5154;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993019 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.6310;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233993055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7379;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233993162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8368;ERATE=0.0002;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233993226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0572;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0002;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 233993248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6683;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993274 . G GA 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7095;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233993324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233993427 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0316;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0002;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 233993503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7303;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993533 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233993546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9642;ERATE=0.0002;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233993612 rs35351489 TAA T 9525 PASS INDEL;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0603;AVGPOST=0.9993;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 233993636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0026;AVGPOST=0.9996;RSQ=0.9296;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233993694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0805;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0006;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 233993771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8476;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233993786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233993808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0413;AVGPOST=0.9997;RSQ=0.9968;ERATE=0.0003;THETA=0.0008;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 233993810 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9992;RSQ=0.9804;ERATE=0.0002;THETA=0.0001;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 233993871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1836;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 233993917 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.1054;AVGPOST=0.9987;RSQ=0.9949;ERATE=0.0003;THETA=0.0005;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 233993929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0471;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 233993931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0949;AVGPOST=0.9992;RSQ=0.9964;ERATE=0.0003;THETA=0.0028;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 233994000 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6106;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 233994073 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0002;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 233994332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7891;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233994373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5611;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233994392 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0083;AVGPOST=0.9993;RSQ=0.9635;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 233994538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0113;AVGPOST=0.9983;RSQ=0.9445;ERATE=0.0002;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233994571 . TG T 367 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9147;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233994577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233994671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233994706 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0040;AVGPOST=0.9997;RSQ=0.9731;ERATE=0.0002;THETA=0.0017;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233994769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8776;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233994791 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9122;ERATE=0.0002;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233994811 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233994895 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.9047;ERATE=0.0007;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 233994949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7842;ERATE=0.0002;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233994992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9198;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233995053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0295;AVGPOST=0.9992;RSQ=0.9893;ERATE=0.0002;THETA=0.0004;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 233995141 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233995150 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1058;AVGPOST=0.9988;RSQ=0.9944;ERATE=0.0004;THETA=0.0001;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 233995199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0105;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0002;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 233995263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233995425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5934;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233995465 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9369;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233995522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 233995555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.6172;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233995721 . T TC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233995724 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1058;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0002;THETA=0.0004;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 233995733 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5131;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233995812 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8957;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233995918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.9045;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233996047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996143 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7005;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233996167 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996258 rs72164106 TTTTTTG T 34747 PASS INDEL;BAVGPOST=0.960;BRSQ=0.926;LDAF=0.4535;AVGPOST=0.9668;RSQ=0.9500;ERATE=0.0053;THETA=0.0005;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 233996327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.892;LDAF=0.0075;AVGPOST=0.9951;RSQ=0.7637;ERATE=0.0006;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233996328 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8116;ERATE=0.0004;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233996355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0264;AVGPOST=0.9993;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 233996390 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.689;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.8058;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233996488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6744;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233996509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.690;LDAF=0.0015;AVGPOST=0.9977;RSQ=0.3678;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.689;LDAF=0.0035;AVGPOST=0.9950;RSQ=0.4145;ERATE=0.0009;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233996513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.665;LDAF=0.0027;AVGPOST=0.9955;RSQ=0.3449;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233996532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.4651;AVGPOST=0.9951;RSQ=0.9918;ERATE=0.0005;THETA=0.0004;AC=1016;AN=2184 GT:DS:GL:BD 0.46520147 0
1 233996618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996710 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0538;AVGPOST=0.9994;RSQ=0.9958;ERATE=0.0002;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 233996717 . GCAAGAAGAGCA G 2233 PASS INDEL;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0041;AVGPOST=0.9986;RSQ=0.8471;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 233996781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996786 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233996787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.699;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7786;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233996845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0068;AVGPOST=0.9988;RSQ=0.9319;ERATE=0.0002;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 233996958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233996968 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8844;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233997000 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 233997026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0569;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0002;THETA=0.0003;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 233997062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 233997073 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233997216 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0142;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 233997254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0570;AVGPOST=0.9990;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 233997332 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7587;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233997359 . T TC 820 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0269;AVGPOST=0.9993;RSQ=0.9887;ERATE=0.0004;THETA=0.0010;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 233997378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.1171;AVGPOST=0.9967;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 233997667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5717;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233997733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5779;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233997752 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.931;LDAF=0.0119;AVGPOST=0.9975;RSQ=0.9102;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 233997764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.578;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.4837;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233997852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9999;RSQ=0.9855;ERATE=0.0002;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 233997870 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4374;AVGPOST=0.9973;RSQ=0.9952;ERATE=0.0006;THETA=0.0011;AC=954;AN=2184 GT:DS:GL:BD 0.43681318 0
1 233998039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233998067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3591;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0008;THETA=0.0003;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 233998112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6708;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233998193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233998285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233998343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9122;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233998408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0002;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 233998612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0629;AVGPOST=0.9976;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 233998872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1089;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0002;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 233999134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6043;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233999167 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1254;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0004;THETA=0.0034;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 233999207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0226;AVGPOST=0.9992;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 233999366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 233999377 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0523;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0004;THETA=0.0005;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 233999380 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8303;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 233999615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.921;LDAF=0.0224;AVGPOST=0.9941;RSQ=0.8943;ERATE=0.0005;THETA=0.0001;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 233999656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0061;AVGPOST=0.9984;RSQ=0.9046;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 233999657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4920;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 233999687 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9267;ERATE=0.0003;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 233999830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.904;LDAF=0.0118;AVGPOST=0.9985;RSQ=0.9496;ERATE=0.0002;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 233999944 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5722;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 233999974 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1085;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 234000069 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6236;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234000155 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0258;AVGPOST=0.9993;RSQ=0.9873;ERATE=0.0005;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234000175 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8843;ERATE=0.0005;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234000224 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9548;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234000257 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.1688;AVGPOST=0.9953;RSQ=0.9870;ERATE=0.0004;THETA=0.0004;AC=369;AN=2184 GT:DS:GL:BD 0.16895604 0
1 234000270 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0257;AVGPOST=0.9997;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234000315 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8666;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234000390 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234000403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234000416 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234000555 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234000561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234000565 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5965;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0004;THETA=0.0002;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 234000566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8278;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234000759 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0522;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0002;THETA=0.0003;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234000760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7951;ERATE=0.0002;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234000813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0035;AVGPOST=0.9979;RSQ=0.7645;ERATE=0.0004;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234000883 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1371;AVGPOST=0.9987;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 234000931 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1367;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0004;THETA=0.0002;AC=299;AN=2184 GT:DS:GL:BD 0.13690476 0
1 234000957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8708;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234000983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0531;AVGPOST=0.9980;RSQ=0.9866;ERATE=0.0003;THETA=0.0005;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234001016 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6457;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234001077 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8639;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234001137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5897;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234001270 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0172;AVGPOST=0.9993;RSQ=0.9826;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234001304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0260;AVGPOST=0.9993;RSQ=0.9885;ERATE=0.0002;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234001341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0081;AVGPOST=0.9975;RSQ=0.8703;ERATE=0.0010;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234001639 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0051;AVGPOST=0.9995;RSQ=0.9540;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234001645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7143;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234001732 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5724;AVGPOST=0.9963;RSQ=0.9947;ERATE=0.0005;THETA=0.0020;AC=1249;AN=2184 GT:DS:GL:BD 0.57188642 1
1 234001810 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5720;AVGPOST=0.9991;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=1248;AN=2184 GT:DS:GL:BD 0.57142860 1
1 234001857 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0522;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0002;THETA=0.0002;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234001885 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9665;ERATE=0.0002;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234001943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0050;AVGPOST=0.9967;RSQ=0.7475;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234001994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.617;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5846;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234002036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0091;AVGPOST=0.9976;RSQ=0.8974;ERATE=0.0007;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234002122 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0785;AVGPOST=0.9987;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234002267 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9431;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234002326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4425;AVGPOST=0.9973;RSQ=0.9954;ERATE=0.0007;THETA=0.0004;AC=964;AN=2184 GT:DS:GL:BD 0.44139194 0
1 234002328 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0112;AVGPOST=0.9991;RSQ=0.9673;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234002550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.835;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8275;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234002559 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6633;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234002594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234002615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9426;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234002647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0522;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0001;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234002650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4368;AVGPOST=0.9938;RSQ=0.9903;ERATE=0.0014;THETA=0.0002;AC=956;AN=2184 GT:DS:GL:BD 0.43772894 0
1 234002658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234002685 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9995;RSQ=0.9689;ERATE=0.0002;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234002693 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234002709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4904;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234002781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9179;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234002787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0782;AVGPOST=0.9994;RSQ=0.9964;ERATE=0.0003;THETA=0.0001;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234002872 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234003025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0540;AVGPOST=0.9984;RSQ=0.9897;ERATE=0.0004;THETA=0.0002;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234003086 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0532;AVGPOST=0.9978;RSQ=0.9810;ERATE=0.0004;THETA=0.0002;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234003236 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5722;AVGPOST=0.9947;RSQ=0.9912;ERATE=0.0009;THETA=0.0002;AC=1247;AN=2184 GT:DS:GL:BD 0.57097071 1
1 234003366 . TC T 330 PASS INDEL;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8258;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234003393 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234003409 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.886;LDAF=0.0192;AVGPOST=0.9955;RSQ=0.9122;ERATE=0.0002;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234003446 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6897;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234003462 . TG T 147 PASS INDEL;BAVGPOST=0.980;BRSQ=0.538;LDAF=0.0301;AVGPOST=0.9676;RSQ=0.5872;ERATE=0.0070;THETA=0.0001;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234003480 . G GT 1655 PASS INDEL;BAVGPOST=0.943;BRSQ=0.675;LDAF=0.1200;AVGPOST=0.9043;RSQ=0.6485;ERATE=0.0228;THETA=0.0002;AC=209;AN=2184 GT:DS:GL:BD 0.09569597 0
1 234003574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0035;AVGPOST=0.9948;RSQ=0.4481;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234003727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9107;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234003740 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0154;AVGPOST=0.9986;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234003748 . AC A 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5785;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234003767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0035;AVGPOST=0.9976;RSQ=0.7216;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234003814 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4355;AVGPOST=0.9976;RSQ=0.9961;ERATE=0.0004;THETA=0.0004;AC=950;AN=2184 GT:DS:GL:BD 0.43498167 0
1 234003828 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004008 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8279;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234004062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004098 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004113 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9555;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234004360 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0002;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234004533 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004586 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7008;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7960;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234004602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5797;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004676 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5918;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234004705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9644;ERATE=0.0002;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234004871 . G GCT 1187 PASS INDEL;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9032;ERATE=0.0005;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234004902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9988;RSQ=0.7144;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234004960 . ACT A 759 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9991;RSQ=0.9392;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234005105 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4827;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234005365 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9654;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234005448 . T TATGG 7288 PASS INDEL;BAVGPOST=0.865;BRSQ=0.710;LDAF=0.3913;AVGPOST=0.8312;RSQ=0.6846;ERATE=0.0985;THETA=0.0002;AC=821;AN=2184 GT:DS:GL:BD 0.37591577 0
1 234005454 rs71297714 T TAGAC 78584 PASS INDEL;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.5623;AVGPOST=0.9749;RSQ=0.9619;ERATE=0.0053;THETA=0.0004;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 234005485 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6558;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234005488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7993;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234005511 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234005604 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9366;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234005615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7148;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234005715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234005783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.760;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7458;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234006011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.7008;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234006039 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9220;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234006056 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9614;ERATE=0.0002;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234006112 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.5794;AVGPOST=0.9966;RSQ=0.9945;ERATE=0.0015;THETA=0.0004;AC=1264;AN=2184 GT:DS:GL:BD 0.57875460 1
1 234006177 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6686;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234006228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0036;AVGPOST=0.9979;RSQ=0.7454;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234006309 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7262;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234006409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0824;AVGPOST=0.9982;RSQ=0.9914;ERATE=0.0005;THETA=0.0007;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 234006457 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7215;ERATE=0.0006;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234006482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0412;AVGPOST=0.9989;RSQ=0.9894;ERATE=0.0003;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234006540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.727;LDAF=0.0036;AVGPOST=0.9976;RSQ=0.7302;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234006702 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0057;AVGPOST=0.9979;RSQ=0.8612;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234006768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8059;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234006798 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234006924 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0002;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234006931 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234006938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234007015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9772;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234007151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234007233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4367;AVGPOST=0.9977;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=951;AN=2184 GT:DS:GL:BD 0.43543956 0
1 234007244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6253;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234007354 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7343;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234007414 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6062;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0004;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 234007514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.1698;AVGPOST=0.9959;RSQ=0.9898;ERATE=0.0004;THETA=0.0008;AC=370;AN=2184 GT:DS:GL:BD 0.16941392 0
1 234007532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7317;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234007563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7290;ERATE=0.0003;THETA=0.0046;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234007601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0066;AVGPOST=0.9984;RSQ=0.9114;ERATE=0.0003;THETA=0.0084;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234007601 . A AT 16 PASS INDEL;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234007728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8006;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234007775 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8645;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234007827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.764;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8561;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234007929 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7337;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234007964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.6956;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234008049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0066;AVGPOST=0.9987;RSQ=0.9233;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234008132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7653;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234008207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=0.9999;RSQ=0.0499;ERATE=0.0002;THETA=0.0024;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234008222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9628;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234008245 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0002;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234008249 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9277;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234008340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234008364 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0079;AVGPOST=0.9990;RSQ=0.9451;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234008522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9037;ERATE=0.0002;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234008620 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.5924;AVGPOST=0.9904;RSQ=0.9849;ERATE=0.0034;THETA=0.0005;AC=1291;AN=2184 GT:DS:GL:BD 0.59111720 1
1 234008630 . C CG 6452 PASS INDEL;BAVGPOST=0.993;BRSQ=0.943;LDAF=0.0667;AVGPOST=0.9930;RSQ=0.9561;ERATE=0.0009;THETA=0.0006;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 234008684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.976;LDAF=0.3180;AVGPOST=0.9885;RSQ=0.9807;ERATE=0.0031;THETA=0.0062;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 234008743 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.5654;AVGPOST=0.9962;RSQ=0.9941;ERATE=0.0008;THETA=0.0012;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 234008856 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8552;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234008886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.849;LDAF=0.0096;AVGPOST=0.9952;RSQ=0.8158;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234008928 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9675;ERATE=0.0002;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234008936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5258;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234008963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0045;AVGPOST=0.9955;RSQ=0.6676;ERATE=0.0004;THETA=0.0032;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234009048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5592;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234009092 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234009147 . T TG 297 PASS INDEL;BAVGPOST=0.998;BRSQ=0.635;LDAF=0.0063;AVGPOST=0.9907;RSQ=0.3903;ERATE=0.0024;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234009208 . T TG 85 PASS INDEL;BAVGPOST=1.000;BRSQ=0.700;LDAF=0.0028;AVGPOST=0.9958;RSQ=0.4592;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234009231 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.5923;AVGPOST=0.9912;RSQ=0.9862;ERATE=0.0009;THETA=0.0019;AC=1300;AN=2184 GT:DS:GL:BD 0.59523809 1
1 234009322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6696;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234009530 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9844;ERATE=0.0002;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234009763 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1633;AVGPOST=0.9971;RSQ=0.9914;ERATE=0.0006;THETA=0.0005;AC=356;AN=2184 GT:DS:GL:BD 0.16300367 0
1 234009999 . AG A 95 PASS INDEL;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0045;AVGPOST=0.9969;RSQ=0.7261;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234010000 . GAGAA G 2880 PASS INDEL;BAVGPOST=0.985;BRSQ=0.839;LDAF=0.0322;AVGPOST=0.9929;RSQ=0.9192;ERATE=0.0003;THETA=0.0014;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 234010005 . AG A 100 PASS INDEL;BAVGPOST=0.990;BRSQ=0.468;LDAF=0.0160;AVGPOST=0.9869;RSQ=0.7076;ERATE=0.0008;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234010014 . G GA 143 PASS INDEL;BAVGPOST=0.995;BRSQ=0.729;LDAF=0.0121;AVGPOST=0.9863;RSQ=0.5693;ERATE=0.0019;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234010036 . GA G 522 PASS INDEL;BAVGPOST=0.992;BRSQ=0.828;LDAF=0.0241;AVGPOST=0.9936;RSQ=0.8894;ERATE=0.0006;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234010110 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234010130 . GA G 335 PASS INDEL;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0091;AVGPOST=0.9953;RSQ=0.7902;ERATE=0.0007;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234010304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0779;AVGPOST=0.9983;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 234010345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7739;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234010456 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234010468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9614;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234010488 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6008;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234010489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9990;RSQ=0.9519;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234010595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0203;AVGPOST=0.9978;RSQ=0.9539;ERATE=0.0002;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234010822 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0635;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0003;THETA=0.0002;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 234010924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234011062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7552;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234011119 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3552;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 234011148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=0.9992;RSQ=0.9483;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234011259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9335;ERATE=0.0004;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234011378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234011436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5816;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234011442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0029;AVGPOST=0.9966;RSQ=0.6142;ERATE=0.0004;THETA=0.0043;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234011464 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0390;AVGPOST=0.9996;RSQ=0.9951;ERATE=0.0002;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234011486 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0643;AVGPOST=0.9981;RSQ=0.9872;ERATE=0.0004;THETA=0.0006;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234011496 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0151;AVGPOST=0.9994;RSQ=0.9857;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234011497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0639;AVGPOST=0.9988;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234011597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9531;ERATE=0.0002;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234011611 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.9122;AVGPOST=0.9985;RSQ=0.9924;ERATE=0.0002;THETA=0.0007;AC=1992;AN=2184 GT:DS:GL:BD 0.91208792 1
1 234011612 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0630;AVGPOST=0.9971;RSQ=0.9826;ERATE=0.0004;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234011659 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6380;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234011694 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7530;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234011729 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7166;ERATE=0.0002;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234011818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9979;RSQ=0.2545;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234011839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.922;LDAF=0.0205;AVGPOST=0.9967;RSQ=0.9394;ERATE=0.0003;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234012021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234012153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234012217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234012276 . G GGAGT 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234012348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234012484 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0643;AVGPOST=0.9987;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 234012549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5052;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0006;THETA=0.0004;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234012557 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234012660 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0115;AVGPOST=0.9994;RSQ=0.9782;ERATE=0.0002;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234012764 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7629;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234012784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6066;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=1325;AN=2184 GT:DS:GL:BD 0.60668498 1
1 234012804 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0002;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234012840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0120;AVGPOST=0.9986;RSQ=0.9635;ERATE=0.0002;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234012893 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3288;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=718;AN=2184 GT:DS:GL:BD 0.32875457 0
1 234012976 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0644;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0002;THETA=0.0001;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 234013005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0638;AVGPOST=0.9991;RSQ=0.9930;ERATE=0.0005;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234013100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234013288 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5842;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0005;THETA=0.0001;AC=1276;AN=2184 GT:DS:GL:BD 0.58424908 1
1 234013431 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0037;AVGPOST=0.9985;RSQ=0.8408;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234013503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6834;AVGPOST=0.9961;RSQ=0.9927;ERATE=0.0010;THETA=0.0004;AC=1493;AN=2184 GT:DS:GL:BD 0.68360806 1
1 234013725 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9514;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234013754 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234013795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0638;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234013890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9598;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234014024 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0074;AVGPOST=0.9989;RSQ=0.9383;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234014079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6695;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234014137 . G GTA 182 PASS INDEL;BAVGPOST=0.995;BRSQ=0.590;LDAF=0.0227;AVGPOST=0.9739;RSQ=0.5575;ERATE=0.0032;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234014157 . TAC T 2678 PASS INDEL;BAVGPOST=0.902;BRSQ=0.599;LDAF=0.2028;AVGPOST=0.8027;RSQ=0.4944;ERATE=0.0543;THETA=0.0005;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 234014169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.6790;AVGPOST=0.9678;RSQ=0.9463;ERATE=0.0030;THETA=0.0002;AC=1482;AN=2184 GT:DS:GL:BD 0.67857140 1
1 234014215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.954;LDAF=0.5668;AVGPOST=0.9626;RSQ=0.9439;ERATE=0.0055;THETA=0.0004;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 234014277 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234014288 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0017;AVGPOST=0.9983;RSQ=0.6186;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234014469 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234014549 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.833;LDAF=0.0139;AVGPOST=0.9947;RSQ=0.8354;ERATE=0.0005;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234014550 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6754;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234014559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9117;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234014621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1624;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0004;THETA=0.0002;AC=355;AN=2184 GT:DS:GL:BD 0.16254579 0
1 234014761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0137;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0002;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234014770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234014807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9576;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234014873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234015037 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8960;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234015085 . GATAC G 232 PASS INDEL;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7286;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234015111 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.997;LDAF=0.3296;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 234015244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234015286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4793;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234015344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6983;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234015397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8406;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234015628 . CATA C 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5018;ERATE=0.0002;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234015665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3295;AVGPOST=0.9976;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 234015682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234015875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0391;AVGPOST=0.9993;RSQ=0.9920;ERATE=0.0004;THETA=0.0002;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234015966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234016049 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1632;AVGPOST=0.9995;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 234016287 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0109;AVGPOST=0.9971;RSQ=0.9057;ERATE=0.0002;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234016310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1675;AVGPOST=0.9976;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=365;AN=2184 GT:DS:GL:BD 0.16712454 0
1 234016318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234016499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1445;AVGPOST=0.9961;RSQ=0.9883;ERATE=0.0004;THETA=0.0002;AC=315;AN=2184 GT:DS:GL:BD 0.14423077 0
1 234016667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5048;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234016759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9786;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234016958 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5594;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234016959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234017052 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0636;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0002;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234017069 . GTC G 153 PASS INDEL;BAVGPOST=0.988;BRSQ=0.666;LDAF=0.0319;AVGPOST=0.9690;RSQ=0.5894;ERATE=0.0139;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234017103 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234017139 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8841;ERATE=0.0002;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234017163 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0002;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234017212 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0644;AVGPOST=0.9984;RSQ=0.9884;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234017288 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234017364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6968;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234017659 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0378;AVGPOST=0.9988;RSQ=0.9862;ERATE=0.0003;THETA=0.0003;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 234017713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0636;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0002;THETA=0.0001;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234017719 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1627;AVGPOST=0.9985;RSQ=0.9955;ERATE=0.0004;THETA=0.0004;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 234017741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.598;LDAF=0.0220;AVGPOST=0.9737;RSQ=0.5437;ERATE=0.0062;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234017784 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5935;AVGPOST=0.9830;RSQ=0.9748;ERATE=0.0042;THETA=0.0003;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 234017904 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234017926 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234017970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.7164;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234018017 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0629;AVGPOST=0.9991;RSQ=0.9937;ERATE=0.0003;THETA=0.0001;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 234018071 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234018142 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9994;RSQ=0.9391;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234018179 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5169;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234018201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0120;AVGPOST=0.9980;RSQ=0.9309;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234018218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.977;LDAF=0.3273;AVGPOST=0.9835;RSQ=0.9738;ERATE=0.0022;THETA=0.0005;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 234018307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.941;LDAF=0.1609;AVGPOST=0.9930;RSQ=0.9826;ERATE=0.0004;THETA=0.0004;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 234018330 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.956;LDAF=0.6865;AVGPOST=0.9944;RSQ=0.9894;ERATE=0.0008;THETA=0.0004;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 234018336 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4192;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234018415 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0627;AVGPOST=0.9987;RSQ=0.9896;ERATE=0.0006;THETA=0.0002;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 234018518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7992;ERATE=0.0002;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234018584 rs77320132 CT C 7391 PASS INDEL;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0632;AVGPOST=0.9982;RSQ=0.9884;ERATE=0.0003;THETA=0.0002;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234018598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0791;AVGPOST=0.9989;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234018606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0162;AVGPOST=0.9986;RSQ=0.9699;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234018636 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8970;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234018653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6909;AVGPOST=0.9980;RSQ=0.9962;ERATE=0.0004;THETA=0.0003;AC=1507;AN=2184 GT:DS:GL:BD 0.69001830 1
1 234018694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8718;ERATE=0.0003;THETA=0.0012;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234018721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234019020 . G GTA 33027 PASS INDEL;BAVGPOST=0.982;BRSQ=0.967;LDAF=0.5119;AVGPOST=0.9898;RSQ=0.9847;ERATE=0.0008;THETA=0.0004;AC=1121;AN=2184 GT:DS:GL:BD 0.51327837 1
1 234019022 rs35289108 A ATG 73166 PASS INDEL;BAVGPOST=0.981;BRSQ=0.966;LDAF=0.5104;AVGPOST=0.9896;RSQ=0.9842;ERATE=0.0010;THETA=0.0003;AC=1120;AN=2184 GT:DS:GL:BD 0.51282054 1
1 234019023 rs66546618 T TGG 17926 PASS INDEL;BAVGPOST=0.969;BRSQ=0.944;LDAF=0.4701;AVGPOST=0.9547;RSQ=0.9345;ERATE=0.0096;THETA=0.0003;AC=1037;AN=2184 GT:DS:GL:BD 0.47481686 0
1 234019122 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.967;LDAF=0.0230;AVGPOST=0.9974;RSQ=0.9507;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234019138 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0049;AVGPOST=0.9994;RSQ=0.9377;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234019333 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0064;AVGPOST=0.9979;RSQ=0.8894;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234019353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234019354 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9537;ERATE=0.0002;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234019363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0002;THETA=0.0008;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234019370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9309;ERATE=0.0002;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234019392 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0049;AVGPOST=0.9995;RSQ=0.9654;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234019453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234019533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6911;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234019577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0309;AVGPOST=0.9994;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234019659 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0641;AVGPOST=0.9991;RSQ=0.9952;ERATE=0.0002;THETA=0.0002;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 234019684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0001;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234019703 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3283;AVGPOST=0.9953;RSQ=0.9922;ERATE=0.0012;THETA=0.0002;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 234019723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6533;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234019766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234019867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8296;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234019905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234019961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9890;ERATE=0.0002;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234019974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0043;AVGPOST=0.9988;RSQ=0.8789;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234020118 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0122;AVGPOST=0.9987;RSQ=0.9595;ERATE=0.0002;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234020126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0002;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234020153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2011;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=438;AN=2184 GT:DS:GL:BD 0.20054945 0
1 234020195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4924;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0001;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 234020200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6395;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3296;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0002;THETA=0.0003;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 234020253 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0291;AVGPOST=0.9991;RSQ=0.9876;ERATE=0.0004;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234020261 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.8120;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234020285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5047;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234020305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8435;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234020310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7797;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234020481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3315;AVGPOST=0.9974;RSQ=0.9957;ERATE=0.0004;THETA=0.0002;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 234020676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020690 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020740 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6527;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5050;AVGPOST=0.9975;RSQ=0.9958;ERATE=0.0007;THETA=0.0002;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234020880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.904;LDAF=0.0101;AVGPOST=0.9968;RSQ=0.8843;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234020884 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8610;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234020929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234020978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234020981 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021103 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021139 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6951;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234021298 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8376;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234021327 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021333 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8493;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234021340 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234021414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7931;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234021506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5802;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.555;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4959;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234021539 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5686;AVGPOST=0.9953;RSQ=0.9926;ERATE=0.0013;THETA=0.0002;AC=1242;AN=2184 GT:DS:GL:BD 0.56868130 1
1 234021562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234021629 . CAA C 151 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7629;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234021841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.4097;ERATE=0.0002;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234021978 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0118;AVGPOST=0.9996;RSQ=0.9879;ERATE=0.0002;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234022013 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5308;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234022078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5446;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234022118 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.680;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6231;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234022204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7269;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234022213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.2655;AVGPOST=0.9957;RSQ=0.9920;ERATE=0.0005;THETA=0.0004;AC=579;AN=2184 GT:DS:GL:BD 0.26510990 0
1 234022229 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6708;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234022243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0636;AVGPOST=0.9993;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234022272 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.986;LDAF=0.4899;AVGPOST=0.9768;RSQ=0.9654;ERATE=0.0071;THETA=0.0002;AC=1066;AN=2184 GT:DS:GL:BD 0.48809522 0
1 234022533 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7245;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234022586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9595;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234022710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9931;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0002;THETA=0.0002;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 234022793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0002;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234022827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3220;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0005;THETA=0.0002;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 234022926 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6213;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234022959 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9817;ERATE=0.0002;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234022989 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7375;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234022995 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234023131 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234023144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5050;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0004;THETA=0.0003;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234023174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4865;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234023176 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234023234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234023238 . TCA T 190 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6350;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234023433 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234023535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234023559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0545;AVGPOST=0.9991;RSQ=0.9925;ERATE=0.0003;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234023638 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9658;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234023826 rs5781769 AT A 25601 PASS INDEL;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3233;AVGPOST=0.9900;RSQ=0.9840;ERATE=0.0015;THETA=0.0002;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 234023945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8656;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234024002 . A AG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234024126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234024194 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9851;ERATE=0.0003;THETA=0.0001;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234024195 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9665;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234024228 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0154;AVGPOST=0.9991;RSQ=0.9749;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234024243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8700;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234024305 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5050;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234024437 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0031;AVGPOST=0.9981;RSQ=0.7760;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234024474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9886;ERATE=0.0002;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234024492 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8815;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234024500 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0117;AVGPOST=0.9995;RSQ=0.9835;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234024549 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5944;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234024559 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234024646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.5708;AVGPOST=0.9930;RSQ=0.9889;ERATE=0.0016;THETA=0.0003;AC=1245;AN=2184 GT:DS:GL:BD 0.57005495 1
1 234024721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0636;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0002;THETA=0.0005;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234024791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0389;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0002;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234024793 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234024841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0031;AVGPOST=0.9984;RSQ=0.8010;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234024842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7905;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234024874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234024891 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0636;AVGPOST=0.9992;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234024942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.972;LDAF=0.5762;AVGPOST=0.9875;RSQ=0.9807;ERATE=0.0015;THETA=0.0004;AC=1263;AN=2184 GT:DS:GL:BD 0.57829672 1
1 234024963 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234024967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7456;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234025066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5264;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234025076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025086 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5717;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.899;LDAF=0.0156;AVGPOST=0.9996;RSQ=0.9890;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234025222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.624;LDAF=0.0073;AVGPOST=0.9937;RSQ=0.6791;ERATE=0.0014;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234025224 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0037;AVGPOST=0.9986;RSQ=0.8483;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234025263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8247;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234025296 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234025326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1759;AVGPOST=0.9966;RSQ=0.9911;ERATE=0.0005;THETA=0.0003;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 234025415 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6646;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025538 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.5449;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234025558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7425;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234025696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.9062;ERATE=0.0002;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234025747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0051;AVGPOST=0.9977;RSQ=0.8385;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234025748 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025790 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234025865 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.914;LDAF=0.0104;AVGPOST=0.9984;RSQ=0.9460;ERATE=0.0002;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234026172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1725;AVGPOST=0.9986;RSQ=0.9961;ERATE=0.0005;THETA=0.0003;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 234026202 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5784;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234026207 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7795;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234026302 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9704;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234026347 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9992;RSQ=0.9802;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234026367 . CT C 1517 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0107;AVGPOST=0.9987;RSQ=0.9563;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234026389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234026449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9864;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234026492 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3219;AVGPOST=0.9959;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 234026501 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4929;AVGPOST=0.9963;RSQ=0.9943;ERATE=0.0005;THETA=0.0004;AC=1077;AN=2184 GT:DS:GL:BD 0.49313188 0
1 234026557 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234026582 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.6919;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234026585 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0660;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 234026721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8575;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234026765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0165;AVGPOST=0.9986;RSQ=0.9640;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234026903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234026963 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5558;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234026988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7156;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234027035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1439;AVGPOST=0.9928;RSQ=0.9777;ERATE=0.0004;THETA=0.0002;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 234027075 . A AG 7922 PASS INDEL;BAVGPOST=0.890;BRSQ=0.808;LDAF=0.4450;AVGPOST=0.8302;RSQ=0.7557;ERATE=0.0393;THETA=0.0002;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 234027080 rs34207533 G GA 44515 PASS INDEL;BAVGPOST=0.983;BRSQ=0.976;LDAF=0.5623;AVGPOST=0.9782;RSQ=0.9680;ERATE=0.0031;THETA=0.0002;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 234027148 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5001;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234027213 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5980;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234027224 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0040;AVGPOST=0.9968;RSQ=0.6785;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234027225 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0022;AVGPOST=0.9978;RSQ=0.6223;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234027376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8191;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234027417 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234027434 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9986;RSQ=0.3821;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234027496 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8891;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234027566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7728;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234027573 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5624;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234027652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.745;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.4882;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234027688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0134;AVGPOST=0.9993;RSQ=0.9835;ERATE=0.0002;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234027689 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5053;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 234027735 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.3198;AVGPOST=0.9951;RSQ=0.9916;ERATE=0.0009;THETA=0.0004;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 234027848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0666;AVGPOST=0.9982;RSQ=0.9876;ERATE=0.0005;THETA=0.0007;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 234027858 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0145;AVGPOST=0.9988;RSQ=0.9724;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234028002 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0607;AVGPOST=0.9984;RSQ=0.9895;ERATE=0.0004;THETA=0.0003;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 234028041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1728;AVGPOST=0.9978;RSQ=0.9943;ERATE=0.0004;THETA=0.0006;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 234028081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7787;ERATE=0.0002;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234028228 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.1737;AVGPOST=0.9895;RSQ=0.9721;ERATE=0.0057;THETA=0.0006;AC=372;AN=2184 GT:DS:GL:BD 0.17032968 0
1 234028243 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234028359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2650;AVGPOST=0.9949;RSQ=0.9904;ERATE=0.0005;THETA=0.0051;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 234028404 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.883;LDAF=0.0083;AVGPOST=0.9979;RSQ=0.8937;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234028453 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0040;AVGPOST=0.9958;RSQ=0.5800;ERATE=0.0013;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234028645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9856;ERATE=0.0003;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234028870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0632;AVGPOST=0.9977;RSQ=0.9842;ERATE=0.0006;THETA=0.0015;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234028926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0930;AVGPOST=0.9987;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234028931 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0393;AVGPOST=0.9991;RSQ=0.9923;ERATE=0.0003;THETA=0.0005;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 234028965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8976;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234028984 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0002;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234029115 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9692;ERATE=0.0002;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234029163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234029288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9795;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234029486 . AT A 53 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234029673 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0135;AVGPOST=0.9973;RSQ=0.9242;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234029693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.7880;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234029747 . C CT 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.864;LDAF=0.0022;AVGPOST=0.9966;RSQ=0.4201;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234029916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0395;AVGPOST=0.9983;RSQ=0.9825;ERATE=0.0003;THETA=0.0003;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234029941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9201;ERATE=0.0002;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234030083 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9025;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234030173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0542;AVGPOST=0.9991;RSQ=0.9927;ERATE=0.0003;THETA=0.0006;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234030213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0051;AVGPOST=0.9981;RSQ=0.8286;ERATE=0.0005;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234030290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9814;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234030312 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5657;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234030364 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0061;AVGPOST=0.9980;RSQ=0.8648;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234030378 rs55845315 CAT C 11971 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0923;AVGPOST=0.9988;RSQ=0.9948;ERATE=0.0003;THETA=0.0008;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 234030485 . AG A 6 PASS INDEL;BAVGPOST=0.996;BRSQ=0.542;LDAF=0.0043;AVGPOST=0.9950;RSQ=0.5083;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234030486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0902;AVGPOST=0.9981;RSQ=0.9907;ERATE=0.0003;THETA=0.0006;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 234030608 . G GT 1305 PASS INDEL;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0169;AVGPOST=0.9978;RSQ=0.9510;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234030781 . TC T 89 PASS INDEL;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.4501;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234030787 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4412;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234030809 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0002;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234030880 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234030898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8807;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234031096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234031098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6889;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234031116 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0540;AVGPOST=0.9996;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234031127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5996;ERATE=0.0002;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234031139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234031183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6908;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234031216 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234031236 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0540;AVGPOST=0.9995;RSQ=0.9958;ERATE=0.0003;THETA=0.0007;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234031308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0099;AVGPOST=0.9984;RSQ=0.9260;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234031342 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0028;AVGPOST=0.9975;RSQ=0.6464;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234031349 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6720;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234031379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0290;AVGPOST=0.9964;RSQ=0.9492;ERATE=0.0004;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234031380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5576;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234031389 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9252;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234031467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234031495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7493;ERATE=0.0002;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234031496 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7143;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234031516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234031701 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0645;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0002;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 234031794 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9810;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234031837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9421;ERATE=0.0003;THETA=0.0011;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234031920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234031949 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0114;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0002;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234031979 . AG A 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7105;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234032006 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9655;ERATE=0.0002;THETA=0.0001;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234032054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7311;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234032071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.773;LDAF=0.0074;AVGPOST=0.9931;RSQ=0.6721;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234032210 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234032298 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9985;RSQ=0.9545;ERATE=0.0002;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234032330 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.7096;ERATE=0.0002;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234032457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234032596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0037;AVGPOST=0.9980;RSQ=0.7930;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234032650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234032756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0540;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0002;THETA=0.0007;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234032792 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.9203;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234032985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234033063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0028;AVGPOST=0.9965;RSQ=0.6123;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234033074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5874;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234033169 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.6863;ERATE=0.0012;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234033217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3364;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 234033268 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0002;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234033331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4108;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 234033508 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234033605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5489;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234033637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8383;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234033796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0253;AVGPOST=0.9992;RSQ=0.9862;ERATE=0.0002;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234033906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6366;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234033954 . G GGA 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.5344;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234034075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.701;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.7902;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234034081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.927;LDAF=0.0124;AVGPOST=0.9979;RSQ=0.9187;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234034136 . A AT 808 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0113;AVGPOST=0.9989;RSQ=0.9565;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234034151 rs112744908 TTAC T 873 PASS INDEL;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0109;AVGPOST=0.9988;RSQ=0.9547;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234034179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4106;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0006;THETA=0.0003;AC=895;AN=2184 GT:DS:GL:BD 0.40979853 0
1 234034336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2331;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=508;AN=2184 GT:DS:GL:BD 0.23260073 0
1 234034492 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234034619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9131;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234034644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9750;ERATE=0.0002;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234034667 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9587;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234034683 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9834;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234034702 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9391;ERATE=0.0002;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234034804 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6252;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234034823 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.674;LDAF=0.0075;AVGPOST=0.9926;RSQ=0.6067;ERATE=0.0011;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234034902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234034968 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.720;LDAF=0.0036;AVGPOST=0.9967;RSQ=0.6016;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234034995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5076;ERATE=0.0007;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234035005 . CAT C 125 PASS INDEL;BAVGPOST=0.995;BRSQ=0.737;LDAF=0.0216;AVGPOST=0.9748;RSQ=0.5222;ERATE=0.0029;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234035036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0041;AVGPOST=0.9990;RSQ=0.9020;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234035139 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8414;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234035162 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1913;AVGPOST=0.9946;RSQ=0.9862;ERATE=0.0019;THETA=0.0005;AC=417;AN=2184 GT:DS:GL:BD 0.19093406 0
1 234035222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3367;AVGPOST=0.9968;RSQ=0.9946;ERATE=0.0009;THETA=0.0004;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 234035300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9786;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234035420 rs34796742 T TC 59899 PASS INDEL;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5990;AVGPOST=0.9965;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=1306;AN=2184 GT:DS:GL:BD 0.59798533 1
1 234035422 . C CA 15421 PASS INDEL;BAVGPOST=0.962;BRSQ=0.930;LDAF=0.5509;AVGPOST=0.9317;RSQ=0.8992;ERATE=0.0253;THETA=0.0004;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 234035458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.748;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8321;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234035815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9299;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234035865 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0002;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234035923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.9930;AVGPOST=0.9991;RSQ=0.9403;ERATE=0.0003;THETA=0.0004;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 234036006 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3467;AVGPOST=0.9943;RSQ=0.9902;ERATE=0.0014;THETA=0.0005;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 234036007 . C CT 842 PASS INDEL;BAVGPOST=0.940;BRSQ=0.751;LDAF=0.1297;AVGPOST=0.9360;RSQ=0.8017;ERATE=0.0042;THETA=0.0003;AC=289;AN=2184 GT:DS:GL:BD 0.13232601 0
1 234036016 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.921;LDAF=0.1625;AVGPOST=0.9725;RSQ=0.9222;ERATE=0.0040;THETA=0.0003;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 234036134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0932;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0004;THETA=0.0005;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234036185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9748;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234036186 . TA T 696 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0100;AVGPOST=0.9997;RSQ=0.9852;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234036710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7805;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234036807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3524;AVGPOST=0.9986;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234036880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.703;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037115 . C CT 1310 PASS INDEL;BAVGPOST=0.955;BRSQ=0.625;LDAF=0.0695;AVGPOST=0.9686;RSQ=0.8167;ERATE=0.0019;THETA=0.0003;AC=139;AN=2184 GT:DS:GL:BD 0.06364469 0
1 234037117 rs74864435 T TA 8911 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0413;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234037201 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037333 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6575;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234037404 . TC T 436 PASS INDEL;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0151;AVGPOST=0.9973;RSQ=0.9201;ERATE=0.0005;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234037409 . CT C 1323 PASS INDEL;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0126;AVGPOST=0.9976;RSQ=0.9205;ERATE=0.0005;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234037507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234037526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4156;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 234037577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0104;AVGPOST=0.9991;RSQ=0.9730;ERATE=0.0002;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234037588 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0938;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234037606 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037671 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0992;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 234037726 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.5415;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0034;AVGPOST=0.9985;RSQ=0.8578;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234037849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5025;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234037860 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0130;AVGPOST=0.9996;RSQ=0.9866;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234037870 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0002;AVGPOST=0.9996;RSQ=0.3608;ERATE=0.0002;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234037915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9726;ERATE=0.0002;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234037975 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8693;ERATE=0.0002;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234038004 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5989;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0003;THETA=0.0002;AC=1308;AN=2184 GT:DS:GL:BD 0.59890109 1
1 234038065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6787;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234038067 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0046;AVGPOST=0.9989;RSQ=0.9043;ERATE=0.0005;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234038116 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5168;ERATE=0.0002;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234038258 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8833;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234038386 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0105;AVGPOST=0.9981;RSQ=0.9273;ERATE=0.0002;THETA=0.0001;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234038633 . GCTT G 43 PASS INDEL;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6066;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234038641 . TC T 25 PASS INDEL;BAVGPOST=0.992;BRSQ=0.339;LDAF=0.0099;AVGPOST=0.9903;RSQ=0.6607;ERATE=0.0006;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234038642 rs112110989 CT C 2868 PASS INDEL;BAVGPOST=0.994;BRSQ=0.926;LDAF=0.0396;AVGPOST=0.9979;RSQ=0.9759;ERATE=0.0007;THETA=0.0004;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234038648 . TTCTC T 9424 PASS INDEL;BAVGPOST=0.984;BRSQ=0.915;LDAF=0.0948;AVGPOST=0.9937;RSQ=0.9724;ERATE=0.0006;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 234038657 . TC T 1146 PASS INDEL;BAVGPOST=0.977;BRSQ=0.886;LDAF=0.0997;AVGPOST=0.9697;RSQ=0.8836;ERATE=0.0026;THETA=0.0005;AC=211;AN=2184 GT:DS:GL:BD 0.09661172 0
1 234038661 . TC T 17616 PASS INDEL;BAVGPOST=0.980;BRSQ=0.969;LDAF=0.4095;AVGPOST=0.9746;RSQ=0.9600;ERATE=0.0045;THETA=0.0003;AC=901;AN=2184 GT:DS:GL:BD 0.41254580 0
1 234038826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7530;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234038926 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0416;AVGPOST=0.9990;RSQ=0.9904;ERATE=0.0004;THETA=0.0001;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234039000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234039086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0099;AVGPOST=0.9992;RSQ=0.9656;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234039319 . T TA 272 PASS INDEL;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0041;AVGPOST=0.9984;RSQ=0.8454;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234039490 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234039582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7858;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234039668 rs112854847 TA T 26038 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4176;AVGPOST=0.9931;RSQ=0.9884;ERATE=0.0013;THETA=0.0002;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 234039674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9539;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234039787 . TG T 620 PASS INDEL;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0061;AVGPOST=0.9974;RSQ=0.8287;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234039857 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4158;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0013;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 234039906 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.3386;AVGPOST=0.9966;RSQ=0.9941;ERATE=0.0006;THETA=0.0003;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 234039968 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0741;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234039971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234040137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0102;AVGPOST=0.9979;RSQ=0.9192;ERATE=0.0004;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234040264 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9668;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234040421 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.720;LDAF=0.0337;AVGPOST=0.9589;RSQ=0.5003;ERATE=0.0033;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234040436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.823;LDAF=0.0572;AVGPOST=0.9451;RSQ=0.6128;ERATE=0.0023;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234040471 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.290;LDAF=0.0480;AVGPOST=0.9333;RSQ=0.4359;ERATE=0.0039;THETA=0.0037;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234040544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.946;BRSQ=0.739;LDAF=0.1112;AVGPOST=0.9621;RSQ=0.8551;ERATE=0.0019;THETA=0.0008;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 234040742 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.4224;AVGPOST=0.9934;RSQ=0.9902;ERATE=0.0004;THETA=0.0003;AC=921;AN=2184 GT:DS:GL:BD 0.42170331 0
1 234040848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234040866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234040897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7556;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234040898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0646;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 234041029 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.976;LDAF=0.0944;AVGPOST=0.9933;RSQ=0.9714;ERATE=0.0010;THETA=0.0006;AC=200;AN=2184 GT:DS:GL:BD 0.09157509 0
1 234041114 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.556;LDAF=0.0093;AVGPOST=0.9898;RSQ=0.5619;ERATE=0.0013;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234041131 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0618;AVGPOST=0.9893;RSQ=0.9314;ERATE=0.0008;THETA=0.0004;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 234041154 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0078;AVGPOST=0.9971;RSQ=0.8399;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234041317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0002;THETA=0.0004;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234041422 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.4080;AVGPOST=0.9907;RSQ=0.9864;ERATE=0.0093;THETA=0.0007;AC=888;AN=2184 GT:DS:GL:BD 0.40659341 0
1 234041479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234041576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0293;AVGPOST=0.9987;RSQ=0.9848;ERATE=0.0002;THETA=0.0028;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234041667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.942;LDAF=0.0112;AVGPOST=0.9983;RSQ=0.9299;ERATE=0.0013;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234041728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234041735 . ATC A 679 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9505;ERATE=0.0004;THETA=0.0045;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234041792 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0070;AVGPOST=0.9991;RSQ=0.9602;ERATE=0.0002;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234041886 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.8047;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234041936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.615;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4893;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234042048 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0002;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234042129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0193;AVGPOST=0.9974;RSQ=0.9525;ERATE=0.0002;THETA=0.0028;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234042168 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0544;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234042209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234042231 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8576;ERATE=0.0002;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234042383 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0167;AVGPOST=0.9989;RSQ=0.9746;ERATE=0.0002;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234042473 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5558;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234042504 rs112487922 T TA 4910 PASS INDEL;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0653;AVGPOST=0.9867;RSQ=0.9180;ERATE=0.0029;THETA=0.0006;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 234042700 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0107;AVGPOST=0.9980;RSQ=0.9373;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234042804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234042808 . AAAATT A 167 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.4875;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234042834 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0065;AVGPOST=0.9995;RSQ=0.9636;ERATE=0.0002;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234042869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5978;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0004;THETA=0.0004;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 234042910 . ATTC A 65 PASS INDEL;BAVGPOST=0.999;BRSQ=0.663;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4737;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234043131 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5974;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=1304;AN=2184 GT:DS:GL:BD 0.59706962 1
1 234043307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9430;ERATE=0.0002;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234043488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0546;AVGPOST=0.9995;RSQ=0.9961;ERATE=0.0003;THETA=0.0013;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234043533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0086;AVGPOST=0.9983;RSQ=0.9103;ERATE=0.0004;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234043711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4139;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234043800 . CT C 124 PASS INDEL;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234043924 rs11453869 C CA 6395 PASS INDEL;BAVGPOST=0.989;BRSQ=0.953;LDAF=0.1253;AVGPOST=0.9700;RSQ=0.8986;ERATE=0.0057;THETA=0.0003;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 234043943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9982;RSQ=0.9439;ERATE=0.0004;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234044251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7036;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234044252 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7404;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234044261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5315;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234044271 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0543;AVGPOST=0.9992;RSQ=0.9933;ERATE=0.0002;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234044381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.566;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6270;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234044527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.918;LDAF=0.0486;AVGPOST=0.9904;RSQ=0.9354;ERATE=0.0005;THETA=0.0006;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 234044531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.910;LDAF=0.0556;AVGPOST=0.9827;RSQ=0.8898;ERATE=0.0022;THETA=0.0006;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 234044559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.918;LDAF=0.0099;AVGPOST=0.9984;RSQ=0.9296;ERATE=0.0004;THETA=0.0015;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234044588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.4803;AVGPOST=0.9881;RSQ=0.9827;ERATE=0.0012;THETA=0.0022;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 234044631 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6231;ERATE=0.0002;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234044726 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0104;AVGPOST=0.9986;RSQ=0.9382;ERATE=0.0003;THETA=0.0073;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234044743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0548;AVGPOST=0.9980;RSQ=0.9856;ERATE=0.0003;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234044771 . AT A 63 PASS INDEL;BAVGPOST=0.997;BRSQ=0.596;LDAF=0.0083;AVGPOST=0.9978;RSQ=0.8925;ERATE=0.0003;THETA=0.0043;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234044803 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6021;ERATE=0.0005;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234044879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7278;ERATE=0.0005;THETA=0.0050;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234044983 rs113980261 CTG C 4241 PASS INDEL;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0227;AVGPOST=0.9983;RSQ=0.9735;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234045185 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0539;AVGPOST=0.9991;RSQ=0.9938;ERATE=0.0003;THETA=0.0007;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 234045298 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2338;AVGPOST=0.9965;RSQ=0.9924;ERATE=0.0004;THETA=0.0083;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 234045310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0546;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0002;THETA=0.0007;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234045359 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0004;THETA=0.0051;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234045395 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6908;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234045399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5936;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234045452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9609;ERATE=0.0002;THETA=0.0113;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234045516 . G GC 191 PASS INDEL;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6545;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234045624 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9688;ERATE=0.0003;THETA=0.0035;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234045673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8495;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234045684 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234045696 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0078;AVGPOST=0.9995;RSQ=0.9751;ERATE=0.0003;THETA=0.0020;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234045718 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.7083;AVGPOST=0.9948;RSQ=0.9914;ERATE=0.0003;THETA=0.0076;AC=1548;AN=2184 GT:DS:GL:BD 0.70879120 1
1 234045917 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234045947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6991;ERATE=0.0003;THETA=0.0073;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234045997 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0030;AVGPOST=0.9989;RSQ=0.8483;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234046022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9547;ERATE=0.0002;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234046035 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0563;AVGPOST=0.9982;RSQ=0.9870;ERATE=0.0003;THETA=0.0009;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 234046062 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6797;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234046117 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0532;AVGPOST=0.9989;RSQ=0.9923;ERATE=0.0002;THETA=0.0019;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 234046168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.893;LDAF=0.0093;AVGPOST=0.9978;RSQ=0.9012;ERATE=0.0003;THETA=0.0011;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234046292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0072;AVGPOST=0.9991;RSQ=0.9515;ERATE=0.0003;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234046376 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0262;AVGPOST=0.9990;RSQ=0.9857;ERATE=0.0002;THETA=0.0017;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234046429 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.755;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234046475 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8769;ERATE=0.0002;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234046554 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.3588;AVGPOST=0.9892;RSQ=0.9835;ERATE=0.0004;THETA=0.0003;AC=782;AN=2184 GT:DS:GL:BD 0.35805860 0
1 234046603 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7312;AVGPOST=0.9938;RSQ=0.9894;ERATE=0.0013;THETA=0.0020;AC=1598;AN=2184 GT:DS:GL:BD 0.73168498 1
1 234046629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0145;AVGPOST=0.9974;RSQ=0.9325;ERATE=0.0003;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234046630 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234046681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7295;AVGPOST=0.9976;RSQ=0.9952;ERATE=0.0004;THETA=0.0014;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 234046734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0549;AVGPOST=0.9968;RSQ=0.9784;ERATE=0.0003;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234046758 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234046798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0002;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234046871 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.960;LDAF=0.0773;AVGPOST=0.9936;RSQ=0.9667;ERATE=0.0003;THETA=0.0035;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 234046902 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234046935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234046954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9854;ERATE=0.0003;THETA=0.0055;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234047018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8085;ERATE=0.0007;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234047040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0204;AVGPOST=0.9964;RSQ=0.9367;ERATE=0.0003;THETA=0.0055;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234047083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0052;AVGPOST=0.9990;RSQ=0.9280;ERATE=0.0003;THETA=0.0036;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234047109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6269;ERATE=0.0002;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234047178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8924;ERATE=0.0002;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234047265 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.905;LDAF=0.0329;AVGPOST=0.9930;RSQ=0.9215;ERATE=0.0005;THETA=0.0005;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 234047297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0002;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234047318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0529;AVGPOST=0.9962;RSQ=0.9702;ERATE=0.0004;THETA=0.0052;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 234047461 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0464;AVGPOST=0.9974;RSQ=0.9754;ERATE=0.0003;THETA=0.0046;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 234047521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.9078;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234047643 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.2626;AVGPOST=0.9876;RSQ=0.9755;ERATE=0.0005;THETA=0.0030;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 234047649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8667;ERATE=0.0002;THETA=0.0141;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234047718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.972;LDAF=0.0385;AVGPOST=0.9948;RSQ=0.9524;ERATE=0.0006;THETA=0.0198;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 234047842 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9019;ERATE=0.0004;THETA=0.0052;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234047937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5240;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234047950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9995;RSQ=0.0596;ERATE=0.0003;THETA=0.0213;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234048031 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.864;BRSQ=0.771;LDAF=0.3878;AVGPOST=0.8351;RSQ=0.7555;ERATE=0.0740;THETA=0.0135;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 234048117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.731;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6288;ERATE=0.0003;THETA=0.0145;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048120 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0054;AVGPOST=0.9988;RSQ=0.9017;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234048154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4128;ERATE=0.0006;THETA=0.0053;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0050;AVGPOST=0.9970;RSQ=0.7615;ERATE=0.0005;THETA=0.0072;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234048201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8677;ERATE=0.0003;THETA=0.0031;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234048209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0015;AVGPOST=0.9982;RSQ=0.5366;ERATE=0.0004;THETA=0.0104;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234048218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5451;ERATE=0.0003;THETA=0.0039;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048324 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.8903;ERATE=0.0003;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234048363 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5453;ERATE=0.0002;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234048376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0055;AVGPOST=0.9973;RSQ=0.8077;ERATE=0.0004;THETA=0.0043;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234048449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0002;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0166;AVGPOST=0.9998;RSQ=0.9950;ERATE=0.0002;THETA=0.0026;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234048614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8136;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234048750 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234048794 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0165;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0002;THETA=0.0019;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234048809 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0028;AVGPOST=0.9984;RSQ=0.7997;ERATE=0.0003;THETA=0.0054;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234048862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0002;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5806;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234048944 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049096 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8054;ERATE=0.0003;THETA=0.0059;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234049148 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0002;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234049245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9949;ERATE=0.0002;THETA=0.0014;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234049337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9438;ERATE=0.0003;THETA=0.0106;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234049338 . GA G 87 PASS INDEL;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6944;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049607 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049697 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.6629;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234049703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9165;ERATE=0.0002;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234049801 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7348;ERATE=0.0002;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234049951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7965;ERATE=0.0003;THETA=0.0149;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234050077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9524;ERATE=0.0003;THETA=0.0061;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234050090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9564;ERATE=0.0002;THETA=0.0128;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234050263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0002;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050267 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0056;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234050353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3274;AVGPOST=0.9965;RSQ=0.9939;ERATE=0.0004;THETA=0.0008;AC=716;AN=2184 GT:DS:GL:BD 0.32783884 0
1 234050380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050500 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9539;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234050557 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0005;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234050571 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050627 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6193;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050723 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6756;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=0.9993;RSQ=0.9566;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234050759 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234050782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9992;RSQ=0.7878;ERATE=0.0002;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234050809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0002;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234050865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5898;AVGPOST=0.9957;RSQ=0.9930;ERATE=0.0003;THETA=0.0007;AC=1288;AN=2184 GT:DS:GL:BD 0.58974361 1
1 234051054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8509;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234051058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9722;ERATE=0.0002;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234051073 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8520;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234051286 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051291 . G GT 2527 PASS INDEL;BAVGPOST=0.988;BRSQ=0.833;LDAF=0.0486;AVGPOST=0.9659;RSQ=0.7137;ERATE=0.0063;THETA=0.0008;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 234051299 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7903;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051300 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0059;AVGPOST=0.9941;RSQ=0.6175;ERATE=0.0023;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234051338 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9637;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234051378 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4933;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051445 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1230;AVGPOST=0.9968;RSQ=0.9873;ERATE=0.0004;THETA=0.0006;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 234051494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051508 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.932;LDAF=0.0580;AVGPOST=0.9890;RSQ=0.9228;ERATE=0.0006;THETA=0.0005;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 234051521 . AAG A 187 PASS INDEL;BAVGPOST=0.998;BRSQ=0.666;LDAF=0.0039;AVGPOST=0.9946;RSQ=0.5093;ERATE=0.0010;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234051540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5417;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051598 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5402;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.825;LDAF=0.0110;AVGPOST=0.9938;RSQ=0.7867;ERATE=0.0009;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234051801 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234051824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6635;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3071;AVGPOST=0.9959;RSQ=0.9925;ERATE=0.0008;THETA=0.0007;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 234051987 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5301;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234051998 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.9267;AVGPOST=0.9984;RSQ=0.9928;ERATE=0.0004;THETA=0.0005;AC=2024;AN=2184 GT:DS:GL:BD 0.92673993 1
1 234052067 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9595;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234052094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0119;AVGPOST=0.9972;RSQ=0.8954;ERATE=0.0004;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234052134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0047;AVGPOST=0.9966;RSQ=0.7110;ERATE=0.0005;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234052263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0234;AVGPOST=0.9993;RSQ=0.9855;ERATE=0.0004;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234052339 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3485;AVGPOST=0.9969;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 234052419 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7703;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234052439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1008;AVGPOST=0.9976;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 234052466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.9283;AVGPOST=0.9990;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=2028;AN=2184 GT:DS:GL:BD 0.92857140 1
1 234052574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234052710 rs112624115 G GATTC 182461 PASS INDEL;BAVGPOST=0.994;BRSQ=0.963;LDAF=0.9256;AVGPOST=0.9982;RSQ=0.9908;ERATE=0.0004;THETA=0.0004;AC=2022;AN=2184 GT:DS:GL:BD 0.92582417 1
1 234052761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5776;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234052821 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7110;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234052852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7543;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234052897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0383;AVGPOST=0.9991;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 234052993 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6564;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234053017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5944;AVGPOST=0.9914;RSQ=0.9870;ERATE=0.0013;THETA=0.0002;AC=1293;AN=2184 GT:DS:GL:BD 0.59203297 1
1 234053070 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3365;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 234053074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234053167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0087;AVGPOST=0.9985;RSQ=0.9403;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234053212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234053320 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0090;AVGPOST=0.9986;RSQ=0.9295;ERATE=0.0004;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234053343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0242;AVGPOST=0.9995;RSQ=0.9915;ERATE=0.0002;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234053434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234053691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0002;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234053808 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0072;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0002;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234053865 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.934;LDAF=0.0080;AVGPOST=0.9979;RSQ=0.8872;ERATE=0.0005;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234053866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9997;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234053881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9823;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234053888 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9616;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234053918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5638;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234054014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.4225;AVGPOST=0.9972;RSQ=0.9957;ERATE=0.0006;THETA=0.0005;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 234054085 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0246;AVGPOST=0.9992;RSQ=0.9864;ERATE=0.0004;THETA=0.0005;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234054114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234054172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0454;AVGPOST=0.9995;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234054179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0444;AVGPOST=0.9994;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234054468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0168;AVGPOST=0.9992;RSQ=0.9794;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234054524 . TTCTC T 17504 PASS INDEL;BAVGPOST=0.913;BRSQ=0.857;LDAF=0.3240;AVGPOST=0.9461;RSQ=0.9159;ERATE=0.0022;THETA=0.0024;AC=733;AN=2184 GT:DS:GL:BD 0.33562270 0
1 234054540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.710;LDAF=0.1845;AVGPOST=0.8933;RSQ=0.6973;ERATE=0.0213;THETA=0.0004;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 234054542 rs34711437 CTT C 11252 PASS INDEL;BAVGPOST=0.830;BRSQ=0.646;LDAF=0.3686;AVGPOST=0.7822;RSQ=0.6289;ERATE=0.0534;THETA=0.0003;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 234054627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9281;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=2027;AN=2184 GT:DS:GL:BD 0.92811358 1
1 234054630 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1017;AVGPOST=0.9974;RSQ=0.9894;ERATE=0.0004;THETA=0.0003;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 234054721 . C CAGA 310 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234054763 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0265;AVGPOST=0.9989;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234054790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0251;AVGPOST=0.9982;RSQ=0.9731;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234054872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.704;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234055025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0329;AVGPOST=0.9989;RSQ=0.9875;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234055039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3507;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234055170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234055244 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5359;AVGPOST=0.9976;RSQ=0.9962;ERATE=0.0006;THETA=0.0002;AC=1168;AN=2184 GT:DS:GL:BD 0.53479856 1
1 234055399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9282;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0025;AC=2027;AN=2184 GT:DS:GL:BD 0.92811358 1
1 234055489 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8535;ERATE=0.0002;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234055584 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234055603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.7145;ERATE=0.0002;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234055617 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0002;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234055631 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5459;ERATE=0.0002;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234055648 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0053;AVGPOST=0.9990;RSQ=0.9253;ERATE=0.0002;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234055769 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5370;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0004;THETA=0.0014;AC=1171;AN=2184 GT:DS:GL:BD 0.53617215 1
1 234055910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9529;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234056149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234056174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3407;AVGPOST=0.9974;RSQ=0.9959;ERATE=0.0005;THETA=0.0035;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 234056181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0158;AVGPOST=0.9993;RSQ=0.9814;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234056242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.9553;AVGPOST=0.9980;RSQ=0.9833;ERATE=0.0005;THETA=0.0003;AC=2087;AN=2184 GT:DS:GL:BD 0.95558608 1
1 234056363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0002;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234056364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9156;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234056380 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6700;ERATE=0.0002;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234056431 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=1.0000;AVGPOST=1.0000;RSQ=0.0500;ERATE=0.0002;THETA=0.0002;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 234056436 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9026;ERATE=0.0002;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234056486 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0566;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0002;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 234056574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0094;AVGPOST=0.9985;RSQ=0.9451;ERATE=0.0003;THETA=0.0008;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234056634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0002;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234056767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0002;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234056858 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0440;AVGPOST=0.9995;RSQ=0.9951;ERATE=0.0004;THETA=0.0003;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234056957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1008;AVGPOST=0.9992;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 234057007 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1124;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 234057047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234057145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3741;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0002;AC=818;AN=2184 GT:DS:GL:BD 0.37454212 0
1 234057223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5440;AVGPOST=0.9919;RSQ=0.9877;ERATE=0.0031;THETA=0.0004;AC=1187;AN=2184 GT:DS:GL:BD 0.54349816 1
1 234057306 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0002;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234057326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8338;ERATE=0.0002;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234057446 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.726;LDAF=0.0325;AVGPOST=0.9797;RSQ=0.7543;ERATE=0.0015;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234057537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.921;LDAF=0.0268;AVGPOST=0.9979;RSQ=0.9639;ERATE=0.0006;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234057574 . ATGT A 625 PASS INDEL;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8831;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234057658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9412;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234057695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8016;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234057779 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.955;LDAF=0.3926;AVGPOST=0.9657;RSQ=0.9490;ERATE=0.0087;THETA=0.0004;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 234057820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.950;LDAF=0.0717;AVGPOST=0.9966;RSQ=0.9791;ERATE=0.0005;THETA=0.0001;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 234057916 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0090;AVGPOST=0.9986;RSQ=0.9300;ERATE=0.0005;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234058508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234058551 . ATCT A 285 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.5076;ERATE=0.0009;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234058586 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.923;BRSQ=0.868;LDAF=0.5053;AVGPOST=0.9324;RSQ=0.8997;ERATE=0.0059;THETA=0.0003;AC=1136;AN=2184 GT:DS:GL:BD 0.52014655 1
1 234058629 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0311;AVGPOST=0.9984;RSQ=0.9788;ERATE=0.0004;THETA=0.0004;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234058654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.836;LDAF=0.0109;AVGPOST=0.9956;RSQ=0.8285;ERATE=0.0007;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234058668 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9791;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234058680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.799;LDAF=0.0176;AVGPOST=0.9862;RSQ=0.7170;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234058696 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3976;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234058698 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0234;AVGPOST=0.9982;RSQ=0.9659;ERATE=0.0004;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234058731 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0072;AVGPOST=0.9997;RSQ=0.9806;ERATE=0.0002;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234058872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234058920 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2942;AVGPOST=0.9797;RSQ=0.9626;ERATE=0.0024;THETA=0.0003;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 234058924 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.5340;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234058934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1086;AVGPOST=0.9947;RSQ=0.9775;ERATE=0.0007;THETA=0.0001;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 234059121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3987;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0005;THETA=0.0008;AC=870;AN=2184 GT:DS:GL:BD 0.39835164 0
1 234059145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5123;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234059154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0128;AVGPOST=0.9964;RSQ=0.8824;ERATE=0.0007;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234059155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0135;AVGPOST=0.9984;RSQ=0.9472;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234059255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.1072;AVGPOST=0.9979;RSQ=0.9901;ERATE=0.0005;THETA=0.0002;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 234059495 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0087;AVGPOST=0.9991;RSQ=0.9550;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234059543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6830;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234059545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234059567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0002;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234059688 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8538;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234059694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0268;AVGPOST=0.9988;RSQ=0.9842;ERATE=0.0003;THETA=0.0002;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234059702 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0002;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234059723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8354;ERATE=0.0002;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234059750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9987;RSQ=0.9520;ERATE=0.0002;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234059751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0057;AVGPOST=0.9989;RSQ=0.9236;ERATE=0.0004;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234059786 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.9251;AVGPOST=0.9937;RSQ=0.9677;ERATE=0.0011;THETA=0.0002;AC=2024;AN=2184 GT:DS:GL:BD 0.92673993 1
1 234059856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0258;AVGPOST=0.9987;RSQ=0.9841;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234059863 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3321;AVGPOST=0.9891;RSQ=0.9834;ERATE=0.0010;THETA=0.0005;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 234059875 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8105;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234059937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0255;AVGPOST=0.9989;RSQ=0.9845;ERATE=0.0002;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234059949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3987;AVGPOST=0.9954;RSQ=0.9933;ERATE=0.0006;THETA=0.0004;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 234060024 . G GT 1372 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9984;RSQ=0.9378;ERATE=0.0005;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234060037 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.760;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6663;ERATE=0.0002;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234060103 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0077;AVGPOST=0.9985;RSQ=0.9124;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234060118 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.741;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6355;ERATE=0.0010;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234060121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0153;AVGPOST=0.9995;RSQ=0.9870;ERATE=0.0002;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234060214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3408;AVGPOST=0.9875;RSQ=0.9807;ERATE=0.0016;THETA=0.0003;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 234060226 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1064;AVGPOST=0.9987;RSQ=0.9939;ERATE=0.0005;THETA=0.0002;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 234060227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5037;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234060263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5940;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234060319 . CA C 6479 PASS INDEL;BAVGPOST=0.995;BRSQ=0.974;LDAF=0.1072;AVGPOST=0.9974;RSQ=0.9895;ERATE=0.0006;THETA=0.0002;AC=231;AN=2184 GT:DS:GL:BD 0.10576923 0
1 234060361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.2972;AVGPOST=0.9913;RSQ=0.9840;ERATE=0.0011;THETA=0.0005;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 234060387 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0078;AVGPOST=0.9980;RSQ=0.8884;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234060510 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.820;LDAF=0.9468;AVGPOST=0.9587;RSQ=0.7085;ERATE=0.0062;THETA=0.0003;AC=2094;AN=2184 GT:DS:GL:BD 0.95879120 1
1 234060549 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.3008;AVGPOST=0.9960;RSQ=0.9918;ERATE=0.0006;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 234060590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.830;LDAF=0.0069;AVGPOST=0.9973;RSQ=0.8373;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234060910 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5442;ERATE=0.0007;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234060950 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0143;AVGPOST=0.9972;RSQ=0.9193;ERATE=0.0006;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234060966 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0437;AVGPOST=0.9989;RSQ=0.9892;ERATE=0.0004;THETA=0.0007;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234061018 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.1018;AVGPOST=0.9972;RSQ=0.9868;ERATE=0.0006;THETA=0.0004;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 234061020 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0023;AVGPOST=0.9973;RSQ=0.5138;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234061078 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0031;AVGPOST=0.9963;RSQ=0.6270;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234061146 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0285;AVGPOST=0.9983;RSQ=0.9754;ERATE=0.0005;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 234061156 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.959;LDAF=0.3935;AVGPOST=0.9721;RSQ=0.9563;ERATE=0.0040;THETA=0.0004;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 234061268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4616;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234061368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0223;AVGPOST=0.9935;RSQ=0.8794;ERATE=0.0008;THETA=0.0004;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234061415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0158;AVGPOST=0.9989;RSQ=0.9676;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234061470 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0950;AVGPOST=0.9971;RSQ=0.9864;ERATE=0.0007;THETA=0.0007;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234061560 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0099;AVGPOST=0.9984;RSQ=0.9265;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234061563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0112;AVGPOST=0.9958;RSQ=0.8491;ERATE=0.0007;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234061845 . CAGTT C 246 PASS INDEL;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7280;ERATE=0.0004;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234061874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0046;AVGPOST=0.9986;RSQ=0.8651;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234061980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0031;AVGPOST=0.9975;RSQ=0.6779;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234061983 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234061984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234062063 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9301;AVGPOST=0.9990;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=2032;AN=2184 GT:DS:GL:BD 0.93040293 1
1 234062108 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3770;AVGPOST=0.9959;RSQ=0.9934;ERATE=0.0005;THETA=0.0002;AC=824;AN=2184 GT:DS:GL:BD 0.37728938 0
1 234062126 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7577;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234062171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0238;AVGPOST=0.9990;RSQ=0.9822;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234062192 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6710;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234062251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1055;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0004;THETA=0.0002;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234062344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0053;AVGPOST=0.9976;RSQ=0.8167;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234062367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0110;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234062467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0022;AVGPOST=0.9986;RSQ=0.7284;ERATE=0.0011;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234062501 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234062529 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6205;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234062546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0080;AVGPOST=0.9993;RSQ=0.9672;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234062708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0265;AVGPOST=0.9992;RSQ=0.9865;ERATE=0.0004;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234062709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0942;AVGPOST=0.9984;RSQ=0.9929;ERATE=0.0004;THETA=0.0004;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234062713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0158;AVGPOST=0.9991;RSQ=0.9750;ERATE=0.0005;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234062739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.7407;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 234062773 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6549;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234062776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4540;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234062881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234062911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0269;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0003;THETA=0.0003;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234062943 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0263;AVGPOST=0.9994;RSQ=0.9909;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234062978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234063048 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1065;AVGPOST=0.9982;RSQ=0.9931;ERATE=0.0003;THETA=0.0005;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234063073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0423;AVGPOST=0.9988;RSQ=0.9892;ERATE=0.0003;THETA=0.0002;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 234063089 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1053;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0005;THETA=0.0005;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234063140 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0155;AVGPOST=0.9979;RSQ=0.9504;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234063158 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.3848;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063197 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.732;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7964;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234063261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8167;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234063281 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4140;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063283 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5601;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9994;RSQ=0.9690;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234063387 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5084;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234063414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4370;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063436 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6211;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1054;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234063543 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5177;AVGPOST=0.9956;RSQ=0.9927;ERATE=0.0005;THETA=0.0006;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 234063624 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0949;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0003;THETA=0.0001;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 234063631 . TA T 346 PASS INDEL;BAVGPOST=0.995;BRSQ=0.723;LDAF=0.0056;AVGPOST=0.9970;RSQ=0.7891;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234063796 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4227;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234063801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3983;AVGPOST=0.9960;RSQ=0.9935;ERATE=0.0010;THETA=0.0003;AC=872;AN=2184 GT:DS:GL:BD 0.39926741 0
1 234063821 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234063847 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0262;AVGPOST=0.9993;RSQ=0.9881;ERATE=0.0004;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234063911 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0035;AVGPOST=0.9974;RSQ=0.7073;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234063912 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3418;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0004;THETA=0.0002;AC=747;AN=2184 GT:DS:GL:BD 0.34203297 0
1 234064012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0233;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234064021 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4149;AVGPOST=0.9980;RSQ=0.9964;ERATE=0.0008;THETA=0.0002;AC=908;AN=2184 GT:DS:GL:BD 0.41575092 0
1 234064060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4899;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 234064070 . CTGAG C 676 PASS INDEL;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0043;AVGPOST=0.9978;RSQ=0.7967;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234064094 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0233;AVGPOST=0.9991;RSQ=0.9839;ERATE=0.0004;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234064160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3998;AVGPOST=0.9981;RSQ=0.9966;ERATE=0.0006;THETA=0.0003;AC=873;AN=2184 GT:DS:GL:BD 0.39972529 0
1 234064198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234064301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6591;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234064302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1047;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 234064317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9309;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0008;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 234064446 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9998;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234064448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0021;AVGPOST=0.9982;RSQ=0.6357;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234064466 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0008;AVGPOST=0.9988;RSQ=0.3691;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234064487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.648;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.7053;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234064570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234064576 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9979;RSQ=0.9557;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234064621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6222;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234064643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.749;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4883;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234064668 . AC A 509 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9698;ERATE=0.0004;THETA=0.0001;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234064743 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234064799 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8421;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234064872 . A AAT 20910 PASS INDEL;BAVGPOST=0.989;BRSQ=0.980;LDAF=0.5157;AVGPOST=0.9946;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 234064876 rs10632102 T TAC 78884 PASS INDEL;BAVGPOST=0.982;BRSQ=0.978;LDAF=0.5156;AVGPOST=0.9918;RSQ=0.9872;ERATE=0.0014;THETA=0.0008;AC=1125;AN=2184 GT:DS:GL:BD 0.51510990 1
1 234064877 . A ACC 19867 PASS INDEL;BAVGPOST=0.979;BRSQ=0.970;LDAF=0.5120;AVGPOST=0.9904;RSQ=0.9846;ERATE=0.0009;THETA=0.0007;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 234064958 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5160;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0006;THETA=0.0002;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 234065042 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0238;AVGPOST=0.9989;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234065180 . CT C 92 PASS INDEL;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234065185 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234065220 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234065232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5175;AVGPOST=0.9973;RSQ=0.9961;ERATE=0.0006;THETA=0.0003;AC=1128;AN=2184 GT:DS:GL:BD 0.51648355 1
1 234065250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2880;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=629;AN=2184 GT:DS:GL:BD 0.28800365 0
1 234065345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5159;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 234065503 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6958;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234065562 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234065580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9309;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 234065616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5191;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0011;THETA=0.0004;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 234065809 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9786;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234065820 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3744;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0008;THETA=0.0001;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 234065883 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.852;LDAF=0.0078;AVGPOST=0.9967;RSQ=0.8414;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234065915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0098;AVGPOST=0.9976;RSQ=0.8987;ERATE=0.0006;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234065915 . G GA 259 PASS INDEL;BAVGPOST=0.997;BRSQ=0.803;LDAF=0.0097;AVGPOST=0.9984;RSQ=0.9232;ERATE=0.0005;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234066006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2859;AVGPOST=0.9985;RSQ=0.9970;ERATE=0.0005;THETA=0.0004;AC=625;AN=2184 GT:DS:GL:BD 0.28617215 0
1 234066024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234066128 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9659;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234066132 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0113;AVGPOST=0.9994;RSQ=0.9746;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234066204 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2864;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0003;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 234066215 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234066315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234066333 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5161;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=1126;AN=2184 GT:DS:GL:BD 0.51556778 1
1 234066340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0264;AVGPOST=0.9993;RSQ=0.9915;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234066379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.9300;AVGPOST=0.9984;RSQ=0.9917;ERATE=0.0003;THETA=0.0004;AC=2032;AN=2184 GT:DS:GL:BD 0.93040293 1
1 234066398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0088;AVGPOST=0.9981;RSQ=0.9171;ERATE=0.0011;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234066480 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234066506 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9306;AVGPOST=0.9991;RSQ=0.9948;ERATE=0.0004;THETA=0.0004;AC=2033;AN=2184 GT:DS:GL:BD 0.93086082 1
1 234066523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5313;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234066531 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7882;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234066563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.961;LDAF=0.2608;AVGPOST=0.9887;RSQ=0.9770;ERATE=0.0005;THETA=0.0001;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 234066648 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3989;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=871;AN=2184 GT:DS:GL:BD 0.39880952 0
1 234066720 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.3735;AVGPOST=0.9978;RSQ=0.9959;ERATE=0.0006;THETA=0.0005;AC=817;AN=2184 GT:DS:GL:BD 0.37408423 0
1 234066759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3736;AVGPOST=0.9957;RSQ=0.9929;ERATE=0.0011;THETA=0.0002;AC=816;AN=2184 GT:DS:GL:BD 0.37362638 0
1 234066811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4081;AVGPOST=0.9954;RSQ=0.9920;ERATE=0.0011;THETA=0.0002;AC=892;AN=2184 GT:DS:GL:BD 0.40842491 0
1 234066944 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5706;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234067067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9786;ERATE=0.0004;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234067152 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6819;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234067245 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.7617;AVGPOST=0.9920;RSQ=0.9869;ERATE=0.0017;THETA=0.0002;AC=1664;AN=2184 GT:DS:GL:BD 0.76190478 1
1 234067260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0112;AVGPOST=0.9995;RSQ=0.9804;ERATE=0.0003;THETA=0.0001;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234067319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0820;AVGPOST=0.9981;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 234067350 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0157;AVGPOST=0.9994;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234067472 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3507;AVGPOST=0.9974;RSQ=0.9958;ERATE=0.0008;THETA=0.0003;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234067652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.907;LDAF=0.0207;AVGPOST=0.9941;RSQ=0.8903;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234067675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.813;LDAF=0.0059;AVGPOST=0.9972;RSQ=0.7874;ERATE=0.0003;THETA=0.0001;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234067705 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4867;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234067738 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234067763 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9718;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234067791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0939;AVGPOST=0.9992;RSQ=0.9958;ERATE=0.0003;THETA=0.0010;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234067792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9732;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234067830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.855;LDAF=0.0136;AVGPOST=0.9963;RSQ=0.8876;ERATE=0.0003;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234067863 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1071;AVGPOST=0.9963;RSQ=0.9852;ERATE=0.0008;THETA=0.0003;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234067894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1134;AVGPOST=0.9984;RSQ=0.9930;ERATE=0.0006;THETA=0.0003;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 234067924 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0271;AVGPOST=0.9976;RSQ=0.9629;ERATE=0.0006;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234067965 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7533;ERATE=0.0009;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234067992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7231;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068041 rs71574888 C CA 31712 PASS INDEL;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.3404;AVGPOST=0.9896;RSQ=0.9829;ERATE=0.0026;THETA=0.0006;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 234068087 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0112;AVGPOST=0.9986;RSQ=0.9534;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234068137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6188;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234068161 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3491;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=762;AN=2184 GT:DS:GL:BD 0.34890109 0
1 234068216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068260 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0903;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 234068268 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234068375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.846;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9309;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234068558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0940;AVGPOST=0.9984;RSQ=0.9933;ERATE=0.0004;THETA=0.0003;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234068618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.801;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6917;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234068682 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234068743 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1058;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0005;THETA=0.0006;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234068817 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234068869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7664;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234068881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8546;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234068936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234068987 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.9309;AVGPOST=0.9971;RSQ=0.9868;ERATE=0.0004;THETA=0.0003;AC=2034;AN=2184 GT:DS:GL:BD 0.93131870 1
1 234069099 . C CT 47 PASS INDEL;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0066;AVGPOST=0.9898;RSQ=0.4240;ERATE=0.0016;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234069122 . T TC 5030 PASS INDEL;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1013;AVGPOST=0.9947;RSQ=0.9787;ERATE=0.0004;THETA=0.0003;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 234069124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1023;AVGPOST=0.9948;RSQ=0.9791;ERATE=0.0003;THETA=0.0003;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 234069125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.962;LDAF=0.1016;AVGPOST=0.9950;RSQ=0.9800;ERATE=0.0003;THETA=0.0012;AC=222;AN=2184 GT:DS:GL:BD 0.10164835 0
1 234069257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5912;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234069267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0951;AVGPOST=0.9983;RSQ=0.9924;ERATE=0.0004;THETA=0.0004;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 234069303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7853;ERATE=0.0004;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234069348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8362;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234069443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0770;AVGPOST=0.9983;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 234069502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.858;LDAF=0.0102;AVGPOST=0.9962;RSQ=0.8579;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234069518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0058;AVGPOST=0.9983;RSQ=0.8650;ERATE=0.0008;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234069621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6142;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234069694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0158;AVGPOST=0.9995;RSQ=0.9867;ERATE=0.0003;THETA=0.0001;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234069710 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9717;ERATE=0.0003;THETA=0.0038;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234069869 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7132;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234069921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3226;AVGPOST=0.9986;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 234070103 . G GT 2037 PASS INDEL;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0180;AVGPOST=0.9981;RSQ=0.9558;ERATE=0.0004;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234070125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0039;AVGPOST=0.9978;RSQ=0.7814;ERATE=0.0006;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234070142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5067;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234070197 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0064;AVGPOST=0.9995;RSQ=0.9678;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234070351 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6729;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234070368 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.796;LDAF=0.0150;AVGPOST=0.9953;RSQ=0.8839;ERATE=0.0004;THETA=0.0007;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234070387 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0094;AVGPOST=0.9993;RSQ=0.9656;ERATE=0.0004;THETA=0.0010;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234070510 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7191;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234070544 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0246;AVGPOST=0.9991;RSQ=0.9873;ERATE=0.0004;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234070774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3225;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0008;AC=705;AN=2184 GT:DS:GL:BD 0.32280219 0
1 234070890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0768;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0008;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 234070891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234071018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234071089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6996;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234071165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.7079;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234071176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4037;AVGPOST=0.9978;RSQ=0.9968;ERATE=0.0005;THETA=0.0005;AC=880;AN=2184 GT:DS:GL:BD 0.40293041 0
1 234071196 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4266;AVGPOST=0.9926;RSQ=0.9893;ERATE=0.0017;THETA=0.0003;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 234071202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234071476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4275;AVGPOST=0.9968;RSQ=0.9953;ERATE=0.0006;THETA=0.0004;AC=932;AN=2184 GT:DS:GL:BD 0.42673993 0
1 234071612 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0236;AVGPOST=0.9995;RSQ=0.9938;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234071667 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234071694 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0055;AVGPOST=0.9987;RSQ=0.9127;ERATE=0.0004;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234071696 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234071869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6063;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234071959 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.919;LDAF=0.0157;AVGPOST=0.9984;RSQ=0.9521;ERATE=0.0004;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234071964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6336;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234071989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0124;AVGPOST=0.9984;RSQ=0.9511;ERATE=0.0004;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234072007 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0255;AVGPOST=0.9994;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234072015 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234072262 rs67883909 TCTC T 27070 PASS INDEL;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.4001;AVGPOST=0.9710;RSQ=0.9555;ERATE=0.0041;THETA=0.0010;AC=874;AN=2184 GT:DS:GL:BD 0.40018314 0
1 234072278 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8521;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234072293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.891;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9458;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234072356 . TCTC T 56 PASS INDEL;BAVGPOST=0.998;BRSQ=0.729;LDAF=0.0072;AVGPOST=0.9941;RSQ=0.6678;ERATE=0.0034;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234072367 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8037;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234072474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5407;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234072480 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0026;AVGPOST=0.9971;RSQ=0.5904;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234072590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0056;AVGPOST=0.9994;RSQ=0.9515;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234072613 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0531;AVGPOST=0.9993;RSQ=0.9936;ERATE=0.0004;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 234072657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8286;ERATE=0.0013;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234072718 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4684;AVGPOST=0.9973;RSQ=0.9959;ERATE=0.0003;THETA=0.0028;AC=1020;AN=2184 GT:DS:GL:BD 0.46703297 0
1 234072719 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0076;AVGPOST=0.9991;RSQ=0.9453;ERATE=0.0005;THETA=0.0046;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234072812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8462;ERATE=0.0004;THETA=0.0152;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234072827 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0069;AVGPOST=0.9979;RSQ=0.8821;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234073104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7921;ERATE=0.0006;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234073162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5972;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234073369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0191;AVGPOST=0.9982;RSQ=0.9619;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234073416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0710;AVGPOST=0.9988;RSQ=0.9925;ERATE=0.0003;THETA=0.0013;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234073510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9773;ERATE=0.0003;THETA=0.0130;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234073592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8960;ERATE=0.0006;THETA=0.0044;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234073628 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0092;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234073691 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3453;AVGPOST=0.9956;RSQ=0.9926;ERATE=0.0012;THETA=0.0050;AC=751;AN=2184 GT:DS:GL:BD 0.34386447 0
1 234073788 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1310;AVGPOST=0.9961;RSQ=0.9884;ERATE=0.0003;THETA=0.0008;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 234073797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7366;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234073908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0348;AVGPOST=0.9979;RSQ=0.9779;ERATE=0.0004;THETA=0.0011;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234073909 . TAGG T 1447 PASS INDEL;BAVGPOST=0.997;BRSQ=0.924;LDAF=0.0119;AVGPOST=0.9978;RSQ=0.9343;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234073953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0187;AVGPOST=0.9971;RSQ=0.9399;ERATE=0.0006;THETA=0.0051;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234073994 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.623;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8696;ERATE=0.0003;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234074016 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234074053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0337;AVGPOST=0.9965;RSQ=0.9594;ERATE=0.0003;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234074103 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3932;AVGPOST=0.9952;RSQ=0.9926;ERATE=0.0006;THETA=0.0036;AC=859;AN=2184 GT:DS:GL:BD 0.39331502 0
1 234074108 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234074118 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0170;AVGPOST=0.9995;RSQ=0.9870;ERATE=0.0003;THETA=0.0008;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234074150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234074420 rs112222121 GTGGA G 82804 PASS INDEL;BAVGPOST=0.993;BRSQ=0.629;LDAF=0.9849;AVGPOST=0.9817;RSQ=0.4910;ERATE=0.0054;THETA=0.0006;AC=2169;AN=2184 GT:DS:GL:BD 0.99313188 1
1 234074447 . AATGG A 500 PASS INDEL;BAVGPOST=0.991;BRSQ=0.741;LDAF=0.0197;AVGPOST=0.9781;RSQ=0.5532;ERATE=0.0052;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234074512 . AT A 2813 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9865;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234074754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234074788 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234074845 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234074869 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8326;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234074882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0955;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 234075023 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7883;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234075045 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9221;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234075060 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1247;AVGPOST=0.9996;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 234075070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3823;AVGPOST=0.9963;RSQ=0.9945;ERATE=0.0005;THETA=0.0005;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 234075098 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234075112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0038;AVGPOST=0.9975;RSQ=0.7811;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234075125 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9991;RSQ=0.9716;ERATE=0.0003;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234075136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5859;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075207 . GA G 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4597;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075307 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234075345 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234075397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6729;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234075457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234075546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0550;AVGPOST=0.9972;RSQ=0.9801;ERATE=0.0003;THETA=0.0003;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234075610 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1248;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 234075696 . ATTAAAC A 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5446;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234075748 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234075838 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7834;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234075888 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0843;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 234075893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8581;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234075897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3660;AVGPOST=0.9964;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=799;AN=2184 GT:DS:GL:BD 0.36584249 0
1 234075944 . GCA G 35 PASS INDEL;BAVGPOST=0.994;BRSQ=0.693;LDAF=0.0166;AVGPOST=0.9816;RSQ=0.5530;ERATE=0.0053;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234075985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234076097 rs72141150 GAC G 1611 PASS INDEL;BAVGPOST=0.889;BRSQ=0.496;LDAF=0.1635;AVGPOST=0.8464;RSQ=0.5221;ERATE=0.0550;THETA=0.0002;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 234076186 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234076202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.8083;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234076225 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234076418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234076583 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9323;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234076611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6213;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234076704 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234076749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0140;AVGPOST=0.9979;RSQ=0.9412;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234076761 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234076802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4433;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234076817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9277;ERATE=0.0003;THETA=0.0036;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234076877 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234076976 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0957;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 234077027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234077246 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234077258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0021;AVGPOST=0.9986;RSQ=0.7601;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234077259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9269;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234077262 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234077294 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2518;AVGPOST=0.9952;RSQ=0.9908;ERATE=0.0015;THETA=0.0004;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 234077465 . C CA 7240 PASS INDEL;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0963;AVGPOST=0.9968;RSQ=0.9850;ERATE=0.0009;THETA=0.0005;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 234077526 . A AT 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8128;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234077555 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234077559 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0403;AVGPOST=0.9996;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 234077588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234077607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.4917;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234077614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=0.9987;RSQ=0.3726;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234077649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9701;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234077667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8648;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234077709 rs58576140 T TG 6795 PASS INDEL;BAVGPOST=0.895;BRSQ=0.758;LDAF=0.2643;AVGPOST=0.8895;RSQ=0.7964;ERATE=0.0095;THETA=0.0005;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 234077744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.700;LDAF=0.0046;AVGPOST=0.9955;RSQ=0.6116;ERATE=0.0008;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234077810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.669;LDAF=0.0035;AVGPOST=0.9977;RSQ=0.7409;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234077997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6629;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234078002 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0141;AVGPOST=0.9993;RSQ=0.9765;ERATE=0.0004;THETA=0.0020;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234078065 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8268;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234078096 . GT G 2483 PASS INDEL;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0194;AVGPOST=0.9990;RSQ=0.9773;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234078127 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0329;AVGPOST=0.9970;RSQ=0.9711;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234078128 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0327;AVGPOST=0.9968;RSQ=0.9689;ERATE=0.0004;THETA=0.0006;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234078150 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0353;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234078200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6402;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234078223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7969;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234078269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0200;AVGPOST=0.9982;RSQ=0.9709;ERATE=0.0003;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234078295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7232;AVGPOST=0.9922;RSQ=0.9835;ERATE=0.0009;THETA=0.0003;AC=1579;AN=2184 GT:DS:GL:BD 0.72298533 1
1 234078311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.819;LDAF=0.0143;AVGPOST=0.9934;RSQ=0.8187;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234078523 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234078570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9206;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234078705 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9169;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234078734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0174;AVGPOST=0.9990;RSQ=0.9759;ERATE=0.0008;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234078757 . T TG 184 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234078815 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0140;AVGPOST=0.9990;RSQ=0.9711;ERATE=0.0004;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234078825 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234078842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234079013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.9098;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234079053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9094;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234079054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234079077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9490;ERATE=0.0003;THETA=0.0011;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234079691 . G GA 67 PASS INDEL;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6345;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234079754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0141;AVGPOST=0.9991;RSQ=0.9731;ERATE=0.0003;THETA=0.0036;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234079897 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9318;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234079970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.887;LDAF=0.0075;AVGPOST=0.9989;RSQ=0.9307;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234080036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6044;AVGPOST=0.9947;RSQ=0.9911;ERATE=0.0013;THETA=0.0008;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 234080055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9663;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234080281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7750;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080285 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0127;AVGPOST=0.9984;RSQ=0.9478;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234080361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.5182;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080409 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234080453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7855;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234080525 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8666;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234080526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234080589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9406;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080595 . C CT 5003 PASS INDEL;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1480;AVGPOST=0.9713;RSQ=0.9161;ERATE=0.0006;THETA=0.0002;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 234080597 rs11413006 T TA 20255 PASS INDEL;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1243;AVGPOST=0.9968;RSQ=0.9898;ERATE=0.0003;THETA=0.0005;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 234080598 . A AC 5380 PASS INDEL;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1224;AVGPOST=0.9964;RSQ=0.9883;ERATE=0.0004;THETA=0.0005;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 234080599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3354;AVGPOST=0.9959;RSQ=0.9939;ERATE=0.0004;THETA=0.0005;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 234080615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.1384;AVGPOST=0.9970;RSQ=0.9926;ERATE=0.0003;THETA=0.0007;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 234080626 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5778;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234080637 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0037;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234080654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7526;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080742 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9733;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234080863 . AT A 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234080872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2076;AVGPOST=0.9975;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=453;AN=2184 GT:DS:GL:BD 0.20741758 0
1 234081033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0842;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 234081039 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0124;AVGPOST=0.9988;RSQ=0.9586;ERATE=0.0004;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234081125 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234081170 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9992;RSQ=0.9371;ERATE=0.0004;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234081255 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9159;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234081276 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9991;RSQ=0.9689;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234081294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0080;AVGPOST=0.9995;RSQ=0.9710;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234081344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7822;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234081410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6902;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234081509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234081577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1477;AVGPOST=0.9981;RSQ=0.9945;ERATE=0.0005;THETA=0.0006;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 234081732 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8426;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234081890 . T TA 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0024;AVGPOST=0.9975;RSQ=0.6406;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234082063 . CT C 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234082065 . GA G 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234082176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8758;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234082231 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4765;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234082394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0948;AVGPOST=0.9985;RSQ=0.9927;ERATE=0.0003;THETA=0.0002;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 234082486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8614;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234082605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234082735 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234082821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0130;AVGPOST=0.9995;RSQ=0.9825;ERATE=0.0003;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234083013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0224;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234083017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8531;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234083226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.813;LDAF=0.0079;AVGPOST=0.9980;RSQ=0.9044;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234083243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234083272 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0371;AVGPOST=0.9984;RSQ=0.9815;ERATE=0.0005;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234083290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8798;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234083302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.829;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8508;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234083395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7428;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234083429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0160;AVGPOST=0.9990;RSQ=0.9743;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234083499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0205;AVGPOST=0.9953;RSQ=0.9097;ERATE=0.0006;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234083539 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0859;AVGPOST=0.9989;RSQ=0.9939;ERATE=0.0004;THETA=0.0004;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 234083603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.667;LDAF=0.0053;AVGPOST=0.9984;RSQ=0.8571;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234083672 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234083777 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1189;AVGPOST=0.9941;RSQ=0.9787;ERATE=0.0004;THETA=0.0001;AC=256;AN=2184 GT:DS:GL:BD 0.11721612 0
1 234083782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.952;LDAF=0.0876;AVGPOST=0.9880;RSQ=0.9395;ERATE=0.0026;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 234083783 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0032;AVGPOST=0.9971;RSQ=0.6288;ERATE=0.0014;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234083811 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7327;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234083882 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8030;ERATE=0.0004;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234083904 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234083923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0069;AVGPOST=0.9986;RSQ=0.9206;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234084058 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0366;AVGPOST=0.9947;RSQ=0.9516;ERATE=0.0004;THETA=0.0002;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234084174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8805;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234084190 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0861;AVGPOST=0.9989;RSQ=0.9946;ERATE=0.0003;THETA=0.0007;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 234084349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.594;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5430;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234084415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0138;AVGPOST=0.9982;RSQ=0.9520;ERATE=0.0004;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234084464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0665;AVGPOST=0.9942;RSQ=0.9666;ERATE=0.0004;THETA=0.0004;AC=141;AN=2184 GT:DS:GL:BD 0.06456044 0
1 234084516 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0076;AVGPOST=0.9942;RSQ=0.7290;ERATE=0.0006;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234084529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.897;LDAF=0.5684;AVGPOST=0.9138;RSQ=0.8681;ERATE=0.0165;THETA=0.0005;AC=1272;AN=2184 GT:DS:GL:BD 0.58241761 1
1 234084607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.8134;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234084618 . GC G 296 PASS INDEL;BAVGPOST=0.998;BRSQ=0.781;LDAF=0.0050;AVGPOST=0.9964;RSQ=0.7678;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234084663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.2458;AVGPOST=0.9904;RSQ=0.9818;ERATE=0.0004;THETA=0.0038;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 234084723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.819;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9019;ERATE=0.0003;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234084838 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0143;AVGPOST=0.9997;RSQ=0.9899;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234084854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.671;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6626;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234084865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5260;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8537;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234085372 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0223;AVGPOST=0.9983;RSQ=0.9688;ERATE=0.0005;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234085378 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0036;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234085442 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0084;AVGPOST=0.9988;RSQ=0.9445;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234085443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0085;AVGPOST=0.9986;RSQ=0.9347;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234085467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.746;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5437;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234085808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5929;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0083;AVGPOST=0.9977;RSQ=0.8859;ERATE=0.0004;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234085929 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234085993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3036;ERATE=0.0008;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234086025 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.7959;ERATE=0.0006;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234086063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8114;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234086067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.636;LDAF=0.0107;AVGPOST=0.9864;RSQ=0.5140;ERATE=0.0010;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234086131 rs72129185 C CA 1231 PASS INDEL;BAVGPOST=0.537;BRSQ=0.216;LDAF=0.4982;AVGPOST=0.6211;RSQ=0.3544;ERATE=0.0292;THETA=0.0004;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 234086374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4659;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234086530 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0046;AVGPOST=0.9981;RSQ=0.8437;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234086597 . T TA 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234086606 . CT C 2788 PASS INDEL;BAVGPOST=0.994;BRSQ=0.834;LDAF=0.0192;AVGPOST=0.9905;RSQ=0.8189;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234086611 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9653;ERATE=0.0004;THETA=0.0019;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234086722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0215;AVGPOST=0.9984;RSQ=0.9724;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234086848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.7184;AVGPOST=0.9872;RSQ=0.9747;ERATE=0.0008;THETA=0.0009;AC=1569;AN=2184 GT:DS:GL:BD 0.71840662 1
1 234086881 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9450;ERATE=0.0003;THETA=0.0018;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234086926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234086940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0058;AVGPOST=0.9996;RSQ=0.9744;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234086967 . TA T 359 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9376;ERATE=0.0004;THETA=0.0041;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234087041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234087103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8222;ERATE=0.0009;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234087187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0137;AVGPOST=0.9983;RSQ=0.9506;ERATE=0.0003;THETA=0.0011;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234087198 . T TA 65 PASS INDEL;BAVGPOST=0.989;BRSQ=0.549;LDAF=0.0190;AVGPOST=0.9771;RSQ=0.5052;ERATE=0.0081;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234087250 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.478;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5471;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234087353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7012;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234087466 . TTG T 54 PASS INDEL;BAVGPOST=0.990;BRSQ=0.584;LDAF=0.0192;AVGPOST=0.9790;RSQ=0.5665;ERATE=0.0063;THETA=0.0019;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234087482 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7362;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234087490 . G GT 40 PASS INDEL;BAVGPOST=0.998;BRSQ=0.575;LDAF=0.0029;AVGPOST=0.9960;RSQ=0.4769;ERATE=0.0015;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234087525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234087570 . GGCCTCCCAAAGT G 839 PASS INDEL;BAVGPOST=0.998;BRSQ=0.820;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7805;ERATE=0.0004;THETA=0.0023;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234087592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234087637 . C CAT 31 PASS INDEL;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0022;AVGPOST=0.9979;RSQ=0.5819;ERATE=0.0010;THETA=0.0062;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234087698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0263;AVGPOST=0.9994;RSQ=0.9887;ERATE=0.0004;THETA=0.0023;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234087725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8989;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234087867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.769;LDAF=0.0044;AVGPOST=0.9974;RSQ=0.7598;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234087899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8037;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234087902 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.8100;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234087999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8235;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234088002 . G GT 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5810;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088121 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234088249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7385;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234088258 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0051;AVGPOST=0.9979;RSQ=0.8380;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234088393 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088614 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9131;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234088635 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234088895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=0.9997;RSQ=0.9698;ERATE=0.0003;THETA=0.0043;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234088905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234088999 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0271;AVGPOST=0.9987;RSQ=0.9832;ERATE=0.0003;THETA=0.0014;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 234089050 . GT G 70 PASS INDEL;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0028;AVGPOST=0.9959;RSQ=0.4842;ERATE=0.0007;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234089174 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234089193 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234089228 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234089304 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2588;AVGPOST=0.9967;RSQ=0.9943;ERATE=0.0003;THETA=0.0016;AC=564;AN=2184 GT:DS:GL:BD 0.25824177 0
1 234089425 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0057;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234089435 . C CAG 6924 PASS INDEL;BAVGPOST=0.995;BRSQ=0.970;LDAF=0.0832;AVGPOST=0.9941;RSQ=0.9713;ERATE=0.0004;THETA=0.0025;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 234089438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234089439 rs60231061 T TA 33456 PASS INDEL;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2576;AVGPOST=0.9913;RSQ=0.9857;ERATE=0.0003;THETA=0.0007;AC=562;AN=2184 GT:DS:GL:BD 0.25732601 0
1 234089440 . A AC 9039 PASS INDEL;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2567;AVGPOST=0.9902;RSQ=0.9837;ERATE=0.0004;THETA=0.0122;AC=561;AN=2184 GT:DS:GL:BD 0.25686812 0
1 234089462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0081;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234089610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9548;ERATE=0.0003;THETA=0.0127;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234089647 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0059;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234089695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9132;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234089754 . C CT 973 PASS INDEL;BAVGPOST=0.755;BRSQ=0.237;LDAF=0.2536;AVGPOST=0.7230;RSQ=0.3621;ERATE=0.0267;THETA=0.0019;AC=344;AN=2184 GT:DS:GL:BD 0.15750916 0
1 234089844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.542;LDAF=0.0043;AVGPOST=0.9926;RSQ=0.3186;ERATE=0.0006;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234089870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.947;BRSQ=0.439;LDAF=0.9490;AVGPOST=0.9355;RSQ=0.4761;ERATE=0.0109;THETA=0.0071;AC=2120;AN=2184 GT:DS:GL:BD 0.97069597 1
1 234089878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0024;AVGPOST=0.9970;RSQ=0.4309;ERATE=0.0006;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234089954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.861;LDAF=0.0976;AVGPOST=0.9706;RSQ=0.8769;ERATE=0.0015;THETA=0.0099;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 234089981 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.869;LDAF=0.0257;AVGPOST=0.9911;RSQ=0.8826;ERATE=0.0005;THETA=0.0027;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234089988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.960;BRSQ=0.918;LDAF=0.2505;AVGPOST=0.9508;RSQ=0.9085;ERATE=0.0031;THETA=0.0264;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 234090047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.512;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4226;ERATE=0.0006;THETA=0.0139;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234090464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7839;ERATE=0.0003;THETA=0.0193;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234090588 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7425;ERATE=0.0005;THETA=0.0201;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234090592 . A AT 446 PASS INDEL;BAVGPOST=0.995;BRSQ=0.528;LDAF=0.0063;AVGPOST=0.9928;RSQ=0.5642;ERATE=0.0015;THETA=0.0170;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234090626 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.855;LDAF=0.4057;AVGPOST=0.9183;RSQ=0.8796;ERATE=0.0141;THETA=0.0218;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 234090650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.792;LDAF=0.1206;AVGPOST=0.9552;RSQ=0.8364;ERATE=0.0048;THETA=0.0039;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 234090674 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6512;ERATE=0.0003;THETA=0.0081;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234090699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5403;ERATE=0.0004;THETA=0.0228;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234090746 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6016;ERATE=0.0006;THETA=0.0128;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234090751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0027;AVGPOST=0.9977;RSQ=0.6975;ERATE=0.0004;THETA=0.0109;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234090777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.570;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7177;ERATE=0.0004;THETA=0.0096;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234090791 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.578;LDAF=0.0046;AVGPOST=0.9968;RSQ=0.7328;ERATE=0.0005;THETA=0.0291;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234090848 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0047;AVGPOST=0.9979;RSQ=0.8172;ERATE=0.0004;THETA=0.0433;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234090864 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.780;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5545;ERATE=0.0006;THETA=0.0111;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234090870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.818;LDAF=0.0453;AVGPOST=0.9829;RSQ=0.8588;ERATE=0.0003;THETA=0.0077;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234090871 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.809;LDAF=0.0701;AVGPOST=0.9706;RSQ=0.8258;ERATE=0.0039;THETA=0.0183;AC=133;AN=2184 GT:DS:GL:BD 0.06089744 0
1 234090903 . G GA 369 PASS INDEL;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0039;AVGPOST=0.9963;RSQ=0.5876;ERATE=0.0015;THETA=0.0183;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234090931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0003;THETA=0.0192;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234091027 . CAAG C 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6551;ERATE=0.0004;THETA=0.0148;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234091091 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8303;ERATE=0.0015;THETA=0.0245;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234091098 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6839;ERATE=0.0004;THETA=0.0147;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234091114 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234091118 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8785;ERATE=0.0003;THETA=0.0160;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234091139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0336;AVGPOST=0.9951;RSQ=0.9524;ERATE=0.0004;THETA=0.0140;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234091141 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0118;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234091170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.954;LDAF=0.0338;AVGPOST=0.9974;RSQ=0.9720;ERATE=0.0004;THETA=0.0157;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234091174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0215;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234091178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0221;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234091209 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.939;LDAF=0.0107;AVGPOST=0.9988;RSQ=0.9524;ERATE=0.0003;THETA=0.0264;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234091238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0047;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234091379 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.955;LDAF=0.1048;AVGPOST=0.9884;RSQ=0.9523;ERATE=0.0012;THETA=0.0108;AC=224;AN=2184 GT:DS:GL:BD 0.10256410 0
1 234091496 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9065;ERATE=0.0003;THETA=0.0040;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234091506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.5855;ERATE=0.0007;THETA=0.0040;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234091624 rs74545140 C CTT 2581 PASS INDEL;BAVGPOST=0.488;BRSQ=0.080;LDAF=0.6167;AVGPOST=0.6231;RSQ=0.2988;ERATE=0.0235;THETA=0.0110;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 234091640 . T TTC 41 PASS INDEL;BAVGPOST=0.998;BRSQ=0.582;LDAF=0.0058;AVGPOST=0.9952;RSQ=0.6670;ERATE=0.0008;THETA=0.0056;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234091668 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.730;LDAF=0.0051;AVGPOST=0.9962;RSQ=0.6967;ERATE=0.0005;THETA=0.0078;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234091759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.941;LDAF=0.2080;AVGPOST=0.9740;RSQ=0.9448;ERATE=0.0008;THETA=0.0005;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 234091791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.493;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.6548;ERATE=0.0006;THETA=0.0035;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234091824 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4723;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234091984 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0310;AVGPOST=0.9980;RSQ=0.9783;ERATE=0.0003;THETA=0.0032;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234091998 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5338;ERATE=0.0003;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234092093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0112;AVGPOST=0.9990;RSQ=0.9698;ERATE=0.0003;THETA=0.0012;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234092364 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.8373;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234092381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0076;AVGPOST=0.9990;RSQ=0.9407;ERATE=0.0004;THETA=0.0059;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234092478 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9002;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234092504 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8538;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234092567 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1391;AVGPOST=0.9936;RSQ=0.9784;ERATE=0.0004;THETA=0.0060;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 234092603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234092645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234093106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8271;ERATE=0.0003;THETA=0.0013;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234093123 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0034;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234093247 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234093331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0706;AVGPOST=0.9940;RSQ=0.9642;ERATE=0.0007;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234093378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5072;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234093492 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.959;LDAF=0.9634;AVGPOST=0.9916;RSQ=0.9044;ERATE=0.0019;THETA=0.0007;AC=2109;AN=2184 GT:DS:GL:BD 0.96565932 1
1 234093561 rs71734550 C CA 5491 PASS INDEL;BAVGPOST=0.977;BRSQ=0.879;LDAF=0.1017;AVGPOST=0.9554;RSQ=0.8127;ERATE=0.0122;THETA=0.0005;AC=202;AN=2184 GT:DS:GL:BD 0.09249084 0
1 234093619 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234093694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2254;AVGPOST=0.9976;RSQ=0.9948;ERATE=0.0004;THETA=0.0014;AC=493;AN=2184 GT:DS:GL:BD 0.22573259 0
1 234093897 . C CG 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234093948 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0241;AVGPOST=0.9995;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234094037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8448;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234094067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6368;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234094093 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6950;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094110 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0260;AVGPOST=0.9975;RSQ=0.9590;ERATE=0.0004;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234094148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7794;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094366 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9903;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234094466 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2262;AVGPOST=0.9987;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234094565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.689;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6406;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094655 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.784;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8672;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234094738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6042;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2346;AVGPOST=0.9980;RSQ=0.9954;ERATE=0.0003;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 234094872 . C CTT 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234094876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2258;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234095114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7084;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095158 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7068;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095258 . A AT 8 PASS INDEL;BAVGPOST=0.997;BRSQ=0.493;LDAF=0.0059;AVGPOST=0.9909;RSQ=0.4129;ERATE=0.0019;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234095273 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9763;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234095334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1343;AVGPOST=0.9989;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 234095338 . AGT A 150 PASS INDEL;BAVGPOST=0.999;BRSQ=0.785;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8425;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234095361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6055;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234095494 . ATTTC A 2578 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0102;AVGPOST=0.9973;RSQ=0.8949;ERATE=0.0005;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234095503 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095697 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095777 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8259;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234095778 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6283;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095813 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3798;AVGPOST=0.9980;RSQ=0.9966;ERATE=0.0004;THETA=0.0006;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 234095855 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234095908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234095972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1261;AVGPOST=0.9904;RSQ=0.9703;ERATE=0.0003;THETA=0.0004;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 234096016 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2255;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234096060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234096160 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9231;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234096212 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0243;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0001;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234096255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0100;AVGPOST=0.9992;RSQ=0.9667;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234096256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7533;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234096343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234096366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234096430 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0508;AVGPOST=0.9997;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 234096452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7158;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234096460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234096530 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234096576 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0673;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234096601 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0068;AVGPOST=0.9995;RSQ=0.9680;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234096758 . A AC 18 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0027;AVGPOST=0.9981;RSQ=0.6914;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234096935 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4962;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=1082;AN=2184 GT:DS:GL:BD 0.49542123 0
1 234096993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0676;AVGPOST=0.9989;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234097138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4979;AVGPOST=0.9952;RSQ=0.9928;ERATE=0.0009;THETA=0.0003;AC=1083;AN=2184 GT:DS:GL:BD 0.49587911 0
1 234097264 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0250;AVGPOST=0.9983;RSQ=0.9705;ERATE=0.0004;THETA=0.0003;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234097293 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2343;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 234097324 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2348;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 234097332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.717;LDAF=0.0109;AVGPOST=0.9948;RSQ=0.8242;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234097427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9195;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234097472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0674;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234097482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0087;AVGPOST=0.9993;RSQ=0.9705;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234097494 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.544;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5376;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234097524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8005;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234097542 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234097543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0678;AVGPOST=0.9995;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 234097546 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234097576 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234097619 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0020;AVGPOST=0.9994;RSQ=0.8739;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234097866 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.0070;AVGPOST=0.9971;RSQ=0.8400;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234097908 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.4421;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234097948 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098010 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0041;AVGPOST=0.9992;RSQ=0.9235;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234098086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5468;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098168 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1215;AVGPOST=0.9982;RSQ=0.9934;ERATE=0.0004;THETA=0.0002;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 234098220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.883;LDAF=0.0092;AVGPOST=0.9981;RSQ=0.9205;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234098251 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234098310 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0193;AVGPOST=0.9985;RSQ=0.9663;ERATE=0.0003;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234098403 . C CT 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8151;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234098409 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0668;AVGPOST=0.9998;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234098452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2251;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=492;AN=2184 GT:DS:GL:BD 0.22527473 0
1 234098480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098507 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4974;AVGPOST=0.9992;RSQ=0.9985;ERATE=0.0005;THETA=0.0002;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 234098764 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0063;AVGPOST=0.9993;RSQ=0.9523;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234098788 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0672;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234098841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234098918 . GGTCACT G 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6460;ERATE=0.0006;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234098925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234098961 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234099011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7339;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234099110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.966;LDAF=0.8048;AVGPOST=0.9653;RSQ=0.9108;ERATE=0.0035;THETA=0.0001;AC=1781;AN=2184 GT:DS:GL:BD 0.81547618 1
1 234099114 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0122;AVGPOST=0.9936;RSQ=0.7737;ERATE=0.0006;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234099269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0332;AVGPOST=0.9990;RSQ=0.9875;ERATE=0.0003;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234099272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.4633;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234099273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0210;AVGPOST=0.9968;RSQ=0.9288;ERATE=0.0006;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234099282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1194;AVGPOST=0.9957;RSQ=0.9834;ERATE=0.0006;THETA=0.0003;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 234099303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.490;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4944;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234099378 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8222;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=1795;AN=2184 GT:DS:GL:BD 0.82188642 1
1 234099383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7823;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234099392 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4711;AVGPOST=0.9972;RSQ=0.9950;ERATE=0.0008;THETA=0.0002;AC=1030;AN=2184 GT:DS:GL:BD 0.47161171 0
1 234099473 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234099504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9255;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234099600 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1446;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0001;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 234099645 rs80155809 G GT 10323 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1199;AVGPOST=0.9971;RSQ=0.9888;ERATE=0.0006;THETA=0.0004;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 234099819 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0672;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234099867 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8223;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234099915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.751;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8455;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234099923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8397;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234099975 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9997;RSQ=0.9923;ERATE=0.0004;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234099979 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234099988 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234100013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0672;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234100031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0672;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234100050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1012;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 234100317 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2239;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0001;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 234100326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234100359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1444;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=316;AN=2184 GT:DS:GL:BD 0.14468865 0
1 234100363 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8840;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234100471 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9249;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234100513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.9236;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234100539 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8221;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0003;AC=1795;AN=2184 GT:DS:GL:BD 0.82188642 1
1 234100554 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8416;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234100603 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0086;AVGPOST=0.9997;RSQ=0.9848;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234100695 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8696;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234100778 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8647;ERATE=0.0003;THETA=0.0001;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234100806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1385;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0003;THETA=0.0003;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 234100936 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101022 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0024;AVGPOST=0.9984;RSQ=0.7693;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234101115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6695;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101396 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3767;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0008;THETA=0.0004;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 234101417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3782;AVGPOST=0.9971;RSQ=0.9952;ERATE=0.0007;THETA=0.0003;AC=822;AN=2184 GT:DS:GL:BD 0.37637362 0
1 234101529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3451;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 234101545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0681;AVGPOST=0.9992;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234101568 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9003;ERATE=0.0007;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234101626 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1197;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 234101644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0181;AVGPOST=0.9985;RSQ=0.9710;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234101767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.522;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.4380;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6441;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101856 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234101891 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9058;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234101959 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8524;ERATE=0.0006;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234102017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234102072 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2257;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234102321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3799;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234102332 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2259;AVGPOST=0.9993;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234102374 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5972;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234102379 . TA T 1071 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0121;AVGPOST=0.9965;RSQ=0.8789;ERATE=0.0006;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234102504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2255;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234102537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8156;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234102606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.803;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8392;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234102635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2258;AVGPOST=0.9989;RSQ=0.9973;ERATE=0.0004;THETA=0.0001;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234102661 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8051;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234102764 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2265;AVGPOST=0.9980;RSQ=0.9956;ERATE=0.0004;THETA=0.0003;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234102969 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0680;AVGPOST=0.9988;RSQ=0.9919;ERATE=0.0004;THETA=0.0008;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 234102991 rs112661542 G GC 1042 PASS INDEL;BAVGPOST=0.989;BRSQ=0.822;LDAF=0.0270;AVGPOST=0.9844;RSQ=0.7858;ERATE=0.0042;THETA=0.0003;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234103273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0023;AVGPOST=0.9975;RSQ=0.6068;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234103365 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9983;RSQ=0.5612;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234103462 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0091;AVGPOST=0.9992;RSQ=0.9661;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234103691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.975;LDAF=0.0601;AVGPOST=0.9984;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 234103849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234103882 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0098;AVGPOST=0.9983;RSQ=0.9234;ERATE=0.0004;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234103910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9861;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234103931 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234104021 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.982;LDAF=0.0691;AVGPOST=0.9983;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 234104074 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0686;AVGPOST=0.9991;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234104086 . AC A 236 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7287;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234104095 . C CT 993 PASS INDEL;BAVGPOST=0.993;BRSQ=0.798;LDAF=0.0173;AVGPOST=0.9918;RSQ=0.8175;ERATE=0.0013;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234104327 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.818;LDAF=0.0059;AVGPOST=0.9989;RSQ=0.9175;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234104383 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9994;RSQ=0.9742;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234104427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9997;RSQ=0.9805;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234104451 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234104546 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0686;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234104603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9934;AVGPOST=0.9987;RSQ=0.9328;ERATE=0.0003;THETA=0.0003;AC=2171;AN=2184 GT:DS:GL:BD 0.99404764 1
1 234104604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5993;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234104807 . G GC 1227 PASS INDEL;BAVGPOST=0.977;BRSQ=0.635;LDAF=0.0488;AVGPOST=0.9599;RSQ=0.6743;ERATE=0.0058;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234104809 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.838;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8724;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234104810 . G GGC 105 PASS INDEL;BAVGPOST=0.983;BRSQ=0.519;LDAF=0.0138;AVGPOST=0.9880;RSQ=0.6675;ERATE=0.0011;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234104811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1395;AVGPOST=0.9975;RSQ=0.9913;ERATE=0.0004;THETA=0.0002;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 234104834 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4859;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234104839 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9437;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234104928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234105103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0331;AVGPOST=0.9995;RSQ=0.9930;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234105180 . CCTT C 973 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0080;AVGPOST=0.9982;RSQ=0.8961;ERATE=0.0007;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234105201 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0244;AVGPOST=0.9996;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234105211 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2927;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0003;THETA=0.0035;AC=641;AN=2184 GT:DS:GL:BD 0.29349816 0
1 234105460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234105461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234105499 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8061;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234105526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234105610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=0.9994;RSQ=0.9737;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234105721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.963;LDAF=0.0142;AVGPOST=0.9988;RSQ=0.9711;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234105844 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234105853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0141;AVGPOST=0.9992;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234106192 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3516;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=770;AN=2184 GT:DS:GL:BD 0.35256410 0
1 234106193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4923;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0003;THETA=0.0027;AC=1073;AN=2184 GT:DS:GL:BD 0.49130037 0
1 234106213 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9986;RSQ=0.9306;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234106426 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0584;AVGPOST=0.9989;RSQ=0.9930;ERATE=0.0004;THETA=0.0016;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234106481 . CAGAG C 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5462;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234106604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9648;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234106692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5715;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234106694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234106725 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234106732 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2283;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 234106741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6105;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234106882 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9362;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234106891 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5247;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234106897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1209;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0003;THETA=0.0006;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 234107038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8343;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234107063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234107116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234107183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3513;AVGPOST=0.9989;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 234107188 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6528;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234107201 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0144;AVGPOST=0.9987;RSQ=0.9583;ERATE=0.0004;THETA=0.0003;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234107233 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0205;AVGPOST=0.9965;RSQ=0.9404;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234107274 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.705;LDAF=0.0102;AVGPOST=0.9937;RSQ=0.7338;ERATE=0.0006;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234107275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4934;AVGPOST=0.9941;RSQ=0.9909;ERATE=0.0008;THETA=0.0002;AC=1082;AN=2184 GT:DS:GL:BD 0.49542123 0
1 234107314 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3517;AVGPOST=0.9979;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=769;AN=2184 GT:DS:GL:BD 0.35210621 0
1 234107322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9256;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234107326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9588;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234107328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.5269;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234107406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.5529;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234107508 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2275;AVGPOST=0.9902;RSQ=0.9805;ERATE=0.0028;THETA=0.0003;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 234107521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.894;LDAF=0.0605;AVGPOST=0.9827;RSQ=0.8942;ERATE=0.0080;THETA=0.0002;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 234107531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.956;LDAF=0.0228;AVGPOST=0.9991;RSQ=0.9818;ERATE=0.0004;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234107567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.5043;AVGPOST=0.9885;RSQ=0.9846;ERATE=0.0053;THETA=0.0002;AC=1099;AN=2184 GT:DS:GL:BD 0.50320512 1
1 234107662 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.6675;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234107677 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.831;LDAF=0.0054;AVGPOST=0.9984;RSQ=0.8738;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234107734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0104;AVGPOST=0.9989;RSQ=0.9540;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234107748 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.676;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4641;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234107849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7640;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234107863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2269;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 234107868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9376;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234107883 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4985;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0005;THETA=0.0002;AC=1091;AN=2184 GT:DS:GL:BD 0.49954212 0
1 234108006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234108007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9308;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234108019 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1213;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 234108065 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.9879;AVGPOST=0.9996;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 234108069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234108081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0665;AVGPOST=0.9989;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234108220 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0669;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234108368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8148;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234108396 rs60128546 T TATC 14614 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0581;AVGPOST=0.9976;RSQ=0.9848;ERATE=0.0006;THETA=0.0008;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234108450 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8742;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234108451 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234108452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9191;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234108453 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234108507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0684;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0003;THETA=0.0002;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234108633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.4966;AVGPOST=0.9976;RSQ=0.9965;ERATE=0.0006;THETA=0.0002;AC=1087;AN=2184 GT:DS:GL:BD 0.49771062 0
1 234108665 . AC A 69 PASS INDEL;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234108985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9722;ERATE=0.0003;THETA=0.0020;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234109124 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0104;AVGPOST=0.9990;RSQ=0.9606;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234109464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2606;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0007;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 234109661 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0574;AVGPOST=0.9993;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234109847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.740;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7371;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234109920 rs72087661 C CT 1478 PASS INDEL;BAVGPOST=0.522;BRSQ=0.135;LDAF=0.5731;AVGPOST=0.6774;RSQ=0.4465;ERATE=0.0229;THETA=0.0020;AC=1246;AN=2184 GT:DS:GL:BD 0.57051283 1
1 234110114 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.927;LDAF=0.0143;AVGPOST=0.9995;RSQ=0.9832;ERATE=0.0003;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234110126 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9187;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234110223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0424;AVGPOST=0.9990;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 234110307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234110472 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234110505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8819;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234110518 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6906;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234110532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0156;AVGPOST=0.9989;RSQ=0.9735;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234110575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234110635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0195;AVGPOST=0.9991;RSQ=0.9837;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234110769 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4896;AVGPOST=0.9983;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1070;AN=2184 GT:DS:GL:BD 0.48992673 0
1 234110780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234110781 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7176;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=1570;AN=2184 GT:DS:GL:BD 0.71886444 1
1 234110786 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1019;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0020;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 234110847 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2605;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0008;AC=570;AN=2184 GT:DS:GL:BD 0.26098901 0
1 234110872 rs58020624 T TCAGGC 20113 PASS INDEL;BAVGPOST=0.990;BRSQ=0.950;LDAF=0.1013;AVGPOST=0.9969;RSQ=0.9876;ERATE=0.0004;THETA=0.0004;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 234110878 . C CA 285 PASS INDEL;BAVGPOST=0.965;BRSQ=0.557;LDAF=0.0456;AVGPOST=0.9655;RSQ=0.7424;ERATE=0.0005;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 234110881 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0949;AVGPOST=0.9993;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=207;AN=2184 GT:DS:GL:BD 0.09478022 0
1 234111073 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8651;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234111176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5908;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111312 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7932;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234111316 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6337;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234111381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.550;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6309;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0084;AVGPOST=0.9996;RSQ=0.9798;ERATE=0.0003;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234111442 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2098;AVGPOST=0.9974;RSQ=0.9942;ERATE=0.0004;THETA=0.0008;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 234111465 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4169;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0572;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0023;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234111604 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234111610 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0575;AVGPOST=0.9993;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234111640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.941;LDAF=0.0207;AVGPOST=0.9963;RSQ=0.9297;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234111641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0297;AVGPOST=0.9989;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234111676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6120;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234111739 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0196;AVGPOST=0.9997;RSQ=0.9930;ERATE=0.0003;THETA=0.0003;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234111859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5540;AVGPOST=0.9903;RSQ=0.9869;ERATE=0.0036;THETA=0.0029;AC=1214;AN=2184 GT:DS:GL:BD 0.55586082 1
1 234111948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9601;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234111997 . G GA 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4856;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234112214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.626;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7248;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234112246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0058;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234112360 . A AT 491 PASS INDEL;BAVGPOST=0.950;BRSQ=0.541;LDAF=0.0842;AVGPOST=0.9114;RSQ=0.5167;ERATE=0.0347;THETA=0.0002;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 234112381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.699;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5289;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234112402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.971;BRSQ=0.940;LDAF=0.3223;AVGPOST=0.9839;RSQ=0.9732;ERATE=0.0017;THETA=0.0006;AC=714;AN=2184 GT:DS:GL:BD 0.32692307 0
1 234112442 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.941;LDAF=0.5309;AVGPOST=0.9442;RSQ=0.9250;ERATE=0.0106;THETA=0.0004;AC=1180;AN=2184 GT:DS:GL:BD 0.54029304 1
1 234112511 . CA C 242 PASS INDEL;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0031;AVGPOST=0.9978;RSQ=0.7223;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234112544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.2646;AVGPOST=0.9936;RSQ=0.9890;ERATE=0.0006;THETA=0.0003;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 234112555 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1769;AVGPOST=0.9979;RSQ=0.9940;ERATE=0.0004;THETA=0.0005;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 234112634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0368;AVGPOST=0.9988;RSQ=0.9872;ERATE=0.0003;THETA=0.0003;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234112652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0116;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234112657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0251;AVGPOST=0.9996;RSQ=0.9936;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234112713 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234112790 . GT G 86 PASS INDEL;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.5750;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234113077 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0500;AVGPOST=0.9994;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234113095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0053;AVGPOST=0.9974;RSQ=0.7926;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234113205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4628;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234113242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234113275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234113336 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8820;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234113346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8865;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234113362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0003;AVGPOST=0.9997;RSQ=0.6564;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234113383 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234113416 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0564;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 234113530 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5561;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234113607 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9733;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234113671 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234113712 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8749;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234113765 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9117;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234113772 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234113775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0735;AVGPOST=0.9990;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 234113996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7403;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234114076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234114090 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234114104 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234114220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234114371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0085;AVGPOST=0.9990;RSQ=0.9497;ERATE=0.0007;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234114503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0122;AVGPOST=0.9986;RSQ=0.9582;ERATE=0.0004;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234114525 . CA C 7371 PASS INDEL;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.2640;AVGPOST=0.9913;RSQ=0.9834;ERATE=0.0010;THETA=0.0004;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 234114547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0045;AVGPOST=0.9967;RSQ=0.6945;ERATE=0.0006;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234114633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2627;AVGPOST=0.9969;RSQ=0.9931;ERATE=0.0005;THETA=0.0002;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 234114731 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0513;AVGPOST=0.9993;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 234114826 . AAAAAAG A 790 PASS INDEL;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0087;AVGPOST=0.9977;RSQ=0.8862;ERATE=0.0006;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234114897 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7059;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234115011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234115099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0667;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0004;THETA=0.0002;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234115116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1021;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=223;AN=2184 GT:DS:GL:BD 0.10210623 0
1 234115248 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234115297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234115315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5631;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234115326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9816;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234115331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0159;AVGPOST=0.9990;RSQ=0.9789;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234115384 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9128;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234115450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5665;AVGPOST=0.9977;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=1240;AN=2184 GT:DS:GL:BD 0.56776559 1
1 234115454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0373;AVGPOST=0.9989;RSQ=0.9903;ERATE=0.0004;THETA=0.0005;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 234115519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7441;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234115547 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0190;AVGPOST=0.9979;RSQ=0.9607;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234115597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234115622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9046;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234115781 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8421;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234115894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0109;AVGPOST=0.9990;RSQ=0.9669;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234115914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1760;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 234116039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0576;AVGPOST=0.9998;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 234116084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234116123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234116169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.913;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6681;ERATE=0.0003;THETA=0.0032;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234116183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5591;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234116342 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.864;LDAF=0.0158;AVGPOST=0.9956;RSQ=0.8953;ERATE=0.0004;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234116346 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0029;AVGPOST=0.9959;RSQ=0.4929;ERATE=0.0010;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234116364 . CT C 543 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9125;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234116408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6390;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234116462 . AATG A 31 PASS INDEL;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8848;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234116511 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9868;ERATE=0.0004;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234116543 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8923;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234116544 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6798;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234116584 . TCA T 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.650;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5790;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234116636 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234116698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3751;AVGPOST=0.9944;RSQ=0.9913;ERATE=0.0004;THETA=0.0003;AC=823;AN=2184 GT:DS:GL:BD 0.37683150 0
1 234116713 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3750;AVGPOST=0.9947;RSQ=0.9918;ERATE=0.0003;THETA=0.0069;AC=823;AN=2184 GT:DS:GL:BD 0.37683150 0
1 234117029 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234117072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0041;AVGPOST=0.9989;RSQ=0.8846;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234117148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0084;AVGPOST=0.9997;RSQ=0.9818;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234117166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0131;AVGPOST=0.9981;RSQ=0.9479;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234117230 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2271;AVGPOST=0.9953;RSQ=0.9899;ERATE=0.0006;THETA=0.0027;AC=496;AN=2184 GT:DS:GL:BD 0.22710623 0
1 234117271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0111;AVGPOST=0.9987;RSQ=0.9512;ERATE=0.0003;THETA=0.0022;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234117384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8162;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234117475 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0072;AVGPOST=0.9995;RSQ=0.9724;ERATE=0.0003;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234117502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9993;RSQ=0.9711;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234117520 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1403;AVGPOST=0.9983;RSQ=0.9954;ERATE=0.0003;THETA=0.0080;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 234117675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0179;AVGPOST=0.9964;RSQ=0.9344;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234117712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0027;AVGPOST=0.9963;RSQ=0.5407;ERATE=0.0005;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234117940 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234118046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0293;AVGPOST=0.9975;RSQ=0.9708;ERATE=0.0003;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234118223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.956;BRSQ=0.931;LDAF=0.5412;AVGPOST=0.9331;RSQ=0.9077;ERATE=0.0137;THETA=0.0006;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 234118270 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0565;AVGPOST=0.9969;RSQ=0.9773;ERATE=0.0003;THETA=0.0079;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 234118334 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.446;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5655;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234118446 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234118525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0589;AVGPOST=0.9979;RSQ=0.9874;ERATE=0.0003;THETA=0.0013;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234118540 . GT G 335 PASS INDEL;BAVGPOST=0.998;BRSQ=0.751;LDAF=0.0055;AVGPOST=0.9979;RSQ=0.8399;ERATE=0.0005;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234118566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0021;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234118604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0058;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234118610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9459;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234118670 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3294;ERATE=0.0003;THETA=0.0017;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234118685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6204;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234118737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5672;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234118747 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234118794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8786;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234118824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0018;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234118863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1422;AVGPOST=0.9982;RSQ=0.9946;ERATE=0.0004;THETA=0.0023;AC=309;AN=2184 GT:DS:GL:BD 0.14148352 0
1 234118917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1444;AVGPOST=0.9978;RSQ=0.9934;ERATE=0.0004;THETA=0.0013;AC=313;AN=2184 GT:DS:GL:BD 0.14331502 0
1 234118930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0506;AVGPOST=0.9970;RSQ=0.9781;ERATE=0.0004;THETA=0.0068;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234118932 . CTCTA C 7857 PASS INDEL;BAVGPOST=0.992;BRSQ=0.963;LDAF=0.0711;AVGPOST=0.9899;RSQ=0.9452;ERATE=0.0004;THETA=0.0098;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 234119001 . TA T 32 PASS INDEL;BAVGPOST=0.996;BRSQ=0.309;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3891;ERATE=0.0009;THETA=0.0133;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234119004 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1426;AVGPOST=0.9948;RSQ=0.9828;ERATE=0.0004;THETA=0.0017;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 234119074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9187;ERATE=0.0003;THETA=0.0098;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234119124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0130;AVGPOST=0.9977;RSQ=0.9420;ERATE=0.0004;THETA=0.0067;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234119218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5824;ERATE=0.0004;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234119327 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7474;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234119372 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.959;LDAF=0.0693;AVGPOST=0.9938;RSQ=0.9624;ERATE=0.0005;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234119376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6781;ERATE=0.0005;THETA=0.0073;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234119470 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6428;ERATE=0.0003;THETA=0.0058;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234119476 rs113440189 CAA C 2971 PASS INDEL;BAVGPOST=0.993;BRSQ=0.936;LDAF=0.0334;AVGPOST=0.9953;RSQ=0.9453;ERATE=0.0005;THETA=0.0088;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 234119495 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.981;LDAF=0.1848;AVGPOST=0.9895;RSQ=0.9768;ERATE=0.0006;THETA=0.0149;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 234119498 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0097;AVGPOST=0.9979;RSQ=0.9171;ERATE=0.0006;THETA=0.0069;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234119583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0288;AVGPOST=0.9972;RSQ=0.9563;ERATE=0.0003;THETA=0.0031;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 234119647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0107;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234119695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.744;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5595;ERATE=0.0005;THETA=0.0147;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234119701 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234119767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.964;LDAF=0.0556;AVGPOST=0.9953;RSQ=0.9704;ERATE=0.0005;THETA=0.0132;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 234119771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234119810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.2495;AVGPOST=0.9927;RSQ=0.9863;ERATE=0.0005;THETA=0.0109;AC=544;AN=2184 GT:DS:GL:BD 0.24908425 0
1 234119845 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0026;AVGPOST=0.9965;RSQ=0.4753;ERATE=0.0006;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234119852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5319;ERATE=0.0009;THETA=0.0072;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234119979 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0713;AVGPOST=0.9982;RSQ=0.9901;ERATE=0.0003;THETA=0.0009;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234119997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0156;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0007;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234120074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234120124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.2994;AVGPOST=0.9957;RSQ=0.9928;ERATE=0.0007;THETA=0.0035;AC=652;AN=2184 GT:DS:GL:BD 0.29853481 0
1 234120236 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0177;AVGPOST=0.9980;RSQ=0.9526;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234120266 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3451;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 234120412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.6830;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234120438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3465;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 234120480 . TG T 2994 PASS INDEL;BAVGPOST=0.991;BRSQ=0.871;LDAF=0.0226;AVGPOST=0.9957;RSQ=0.9218;ERATE=0.0005;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234120482 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7452;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234120511 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7081;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234120532 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6100;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234120633 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234120653 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7172;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234120670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234120728 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.6753;ERATE=0.0006;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234120758 . G GT 901 PASS INDEL;BAVGPOST=0.956;BRSQ=0.815;LDAF=0.1161;AVGPOST=0.9540;RSQ=0.8486;ERATE=0.0004;THETA=0.0002;AC=255;AN=2184 GT:DS:GL:BD 0.11675824 0
1 234120760 rs59133633 T TG 21157 PASS INDEL;BAVGPOST=0.984;BRSQ=0.970;LDAF=0.3014;AVGPOST=0.9937;RSQ=0.9896;ERATE=0.0008;THETA=0.0006;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 234120762 rs34725210 G GA 17771 PASS INDEL;BAVGPOST=0.959;BRSQ=0.894;LDAF=0.2242;AVGPOST=0.9535;RSQ=0.9107;ERATE=0.0005;THETA=0.0004;AC=491;AN=2184 GT:DS:GL:BD 0.22481684 0
1 234120767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9104;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234120939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1819;AVGPOST=0.9984;RSQ=0.9955;ERATE=0.0004;THETA=0.0002;AC=397;AN=2184 GT:DS:GL:BD 0.18177655 0
1 234121046 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0431;AVGPOST=0.9998;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 234121091 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0356;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234121106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7951;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234121132 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234121177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0017;AVGPOST=0.9989;RSQ=0.7153;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234121190 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8261;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234121343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5958;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121506 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7618;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7437;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121614 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0038;AVGPOST=0.9995;RSQ=0.9392;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234121672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0118;AVGPOST=0.9981;RSQ=0.9352;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234121703 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8018;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234121738 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234121873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2678;AVGPOST=0.9964;RSQ=0.9939;ERATE=0.0007;THETA=0.0002;AC=584;AN=2184 GT:DS:GL:BD 0.26739928 0
1 234121949 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8196;ERATE=0.0005;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234122124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.3534;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0006;THETA=0.0002;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 234122126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.8975;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234122340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1114;AVGPOST=0.9989;RSQ=0.9957;ERATE=0.0004;THETA=0.0005;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 234122399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6151;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234122473 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234122588 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234122852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6037;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234122878 rs72025514 C CA 9708 PASS INDEL;BAVGPOST=0.978;BRSQ=0.933;LDAF=0.1713;AVGPOST=0.9814;RSQ=0.9545;ERATE=0.0015;THETA=0.0003;AC=376;AN=2184 GT:DS:GL:BD 0.17216118 0
1 234122943 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3489;AVGPOST=0.9970;RSQ=0.9949;ERATE=0.0008;THETA=0.0003;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 234123067 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7342;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 234123123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234123274 . C CT 154 PASS INDEL;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234123412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234123428 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9413;ERATE=0.0004;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234123471 . TTC T 125 PASS INDEL;BAVGPOST=0.994;BRSQ=0.669;LDAF=0.0158;AVGPOST=0.9826;RSQ=0.5645;ERATE=0.0042;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234123512 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234123535 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8123;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234123603 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0211;AVGPOST=0.9990;RSQ=0.9825;ERATE=0.0003;THETA=0.0004;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234123654 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234123786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234123881 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0260;AVGPOST=0.9991;RSQ=0.9869;ERATE=0.0003;THETA=0.0027;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234123901 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7899;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234123921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9910;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234123942 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234123957 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9814;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234123977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0428;AVGPOST=0.9995;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 234124231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2351;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 234124249 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0339;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234124329 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234124407 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234124513 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0499;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234124645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234124725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6733;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234124758 . A AT 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.705;LDAF=0.0046;AVGPOST=0.9958;RSQ=0.6731;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234124793 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.7339;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0004;THETA=0.0004;AC=1602;AN=2184 GT:DS:GL:BD 0.73351645 1
1 234124828 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6230;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234124891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0109;AVGPOST=0.9989;RSQ=0.9599;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234124925 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.657;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5281;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234124939 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9464;ERATE=0.0003;THETA=0.0010;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234124946 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0062;AVGPOST=0.9983;RSQ=0.8941;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234125002 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.3072;AVGPOST=0.9964;RSQ=0.9934;ERATE=0.0010;THETA=0.0002;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234125058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0143;AVGPOST=0.9980;RSQ=0.9395;ERATE=0.0003;THETA=0.0005;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234125074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0031;AVGPOST=0.9972;RSQ=0.6079;ERATE=0.0009;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234125097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234125188 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3090;AVGPOST=0.9968;RSQ=0.9949;ERATE=0.0006;THETA=0.0003;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234125236 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0088;AVGPOST=0.9957;RSQ=0.8079;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234125329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234125397 . G GA 925 PASS INDEL;BAVGPOST=0.989;BRSQ=0.635;LDAF=0.0185;AVGPOST=0.9814;RSQ=0.6157;ERATE=0.0020;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234125411 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5892;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234125641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234125650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3532;AVGPOST=0.9903;RSQ=0.9841;ERATE=0.0015;THETA=0.0004;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 234125703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4823;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234125932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.8713;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234125948 . T TA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.581;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.4876;ERATE=0.0005;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234126108 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234126125 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234126159 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3091;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0004;THETA=0.0002;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234126176 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7493;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234126203 . CA C 7496 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0581;AVGPOST=0.9974;RSQ=0.9854;ERATE=0.0003;THETA=0.0002;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 234126225 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234126263 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234126350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5559;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234126360 rs56994064 T TCTCGCCATA 32823 PASS INDEL;BAVGPOST=0.982;BRSQ=0.947;LDAF=0.1545;AVGPOST=0.9862;RSQ=0.9636;ERATE=0.0029;THETA=0.0004;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 234126411 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3088;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0005;THETA=0.0002;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234126454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234126516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4442;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=971;AN=2184 GT:DS:GL:BD 0.44459707 0
1 234126676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3498;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0004;THETA=0.0002;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234126736 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3494;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0004;THETA=0.0005;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234126816 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5566;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234126830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234126855 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6492;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234126890 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0061;AVGPOST=0.9981;RSQ=0.8908;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234126919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3903;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0005;THETA=0.0003;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 234126990 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6196;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234127001 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2295;AVGPOST=0.9983;RSQ=0.9966;ERATE=0.0004;THETA=0.0002;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 234127098 . GC G 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7775;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234127102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.971;LDAF=0.0450;AVGPOST=0.9974;RSQ=0.9789;ERATE=0.0004;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234127156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3498;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234127163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0496;AVGPOST=0.9994;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234127230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3498;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0006;THETA=0.0002;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234127272 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7668;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234127282 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3067;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 234127319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2330;AVGPOST=0.9987;RSQ=0.9973;ERATE=0.0005;THETA=0.0002;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 234127392 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6769;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234127401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3506;AVGPOST=0.9969;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234127426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3496;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0003;THETA=0.0002;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234127527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234127553 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234127572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3042;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234127622 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9537;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234127642 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9265;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234127752 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0076;AVGPOST=0.9987;RSQ=0.9449;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234127770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234127771 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234127772 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234127894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6994;AVGPOST=0.9968;RSQ=0.9943;ERATE=0.0006;THETA=0.0002;AC=1527;AN=2184 GT:DS:GL:BD 0.69917583 1
1 234128107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2338;AVGPOST=0.9979;RSQ=0.9964;ERATE=0.0004;THETA=0.0004;AC=507;AN=2184 GT:DS:GL:BD 0.23214285 0
1 234128121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234128206 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8314;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234128271 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3502;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7364;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234128287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234128376 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6529;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3500;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128441 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3498;AVGPOST=0.9985;RSQ=0.9973;ERATE=0.0004;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128443 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9009;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234128453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234128480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5996;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128590 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.7000;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0003;THETA=0.0008;AC=1528;AN=2184 GT:DS:GL:BD 0.69963372 1
1 234128604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3501;AVGPOST=0.9994;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128671 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7851;ERATE=0.0005;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234128720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3516;AVGPOST=0.9964;RSQ=0.9944;ERATE=0.0005;THETA=0.0003;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234128724 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0127;AVGPOST=0.9994;RSQ=0.9821;ERATE=0.0003;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234128760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128768 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.2553;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234128771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3505;AVGPOST=0.9992;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128860 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5663;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234128874 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3501;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0007;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234128967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3499;AVGPOST=0.9975;RSQ=0.9956;ERATE=0.0005;THETA=0.0004;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234129145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6343;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234129209 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0255;AVGPOST=0.9992;RSQ=0.9877;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234129345 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0580;AVGPOST=0.9993;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234129369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7581;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234129378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4851;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234129501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3503;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234129596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234129650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234129653 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8545;ERATE=0.0015;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234129671 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234129752 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9673;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234129768 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9859;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234129792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3503;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234129799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234129810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5425;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234129824 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234129876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7122;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234129946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6832;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234129957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0211;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234130013 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7238;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234130064 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0508;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0007;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 234130122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7366;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234130123 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9857;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234130178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9997;RSQ=0.9558;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234130198 . T TCG 27272 PASS INDEL;BAVGPOST=0.909;BRSQ=0.845;LDAF=0.4373;AVGPOST=0.8892;RSQ=0.8468;ERATE=0.0250;THETA=0.0003;AC=915;AN=2184 GT:DS:GL:BD 0.41895604 0
1 234130504 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234130507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0072;AVGPOST=0.9996;RSQ=0.9794;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234130508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3506;AVGPOST=0.9976;RSQ=0.9958;ERATE=0.0006;THETA=0.0004;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234130646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.805;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8701;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234130818 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234130854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7986;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234130877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234130954 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7439;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234131044 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234131145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.963;LDAF=0.3173;AVGPOST=0.9828;RSQ=0.9743;ERATE=0.0005;THETA=0.0001;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 234131146 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.963;LDAF=0.3177;AVGPOST=0.9833;RSQ=0.9748;ERATE=0.0006;THETA=0.0008;AC=696;AN=2184 GT:DS:GL:BD 0.31868133 0
1 234131158 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8471;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234131208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234131234 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234131251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0508;AVGPOST=0.9999;RSQ=0.9988;ERATE=0.0003;THETA=0.0005;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 234131370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3501;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234131454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234131494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234131518 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3501;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234131626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0357;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234131631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3503;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234131749 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3495;AVGPOST=0.9977;RSQ=0.9959;ERATE=0.0005;THETA=0.0004;AC=763;AN=2184 GT:DS:GL:BD 0.34935898 0
1 234131784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0358;AVGPOST=0.9996;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234131861 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9794;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234131882 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3517;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0005;THETA=0.0002;AC=768;AN=2184 GT:DS:GL:BD 0.35164836 0
1 234131909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.4327;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234131910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234131914 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3516;AVGPOST=0.9966;RSQ=0.9954;ERATE=0.0004;THETA=0.0003;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234131956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234131982 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1220;AVGPOST=0.9994;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 234132035 . T TA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234132094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3503;AVGPOST=0.9985;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234132111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1294;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0004;THETA=0.0002;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 234132142 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0130;AVGPOST=0.9992;RSQ=0.9738;ERATE=0.0004;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234132152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3503;AVGPOST=0.9972;RSQ=0.9953;ERATE=0.0009;THETA=0.0007;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 234132155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3505;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 234132173 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3398;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 234132217 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3504;AVGPOST=0.9986;RSQ=0.9977;ERATE=0.0005;THETA=0.0007;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 234132287 . T TTG 14160 PASS INDEL;BAVGPOST=0.968;BRSQ=0.931;LDAF=0.3182;AVGPOST=0.9659;RSQ=0.9400;ERATE=0.0050;THETA=0.0003;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 234132292 . G GGA 15638 PASS INDEL;BAVGPOST=0.970;BRSQ=0.935;LDAF=0.3160;AVGPOST=0.9612;RSQ=0.9323;ERATE=0.0082;THETA=0.0013;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 234132336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234132414 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9894;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234132418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3511;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0005;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234132492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.929;LDAF=0.0154;AVGPOST=0.9973;RSQ=0.9294;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234132516 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9995;RSQ=0.9813;ERATE=0.0003;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234132521 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0494;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234132569 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234132579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6169;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234132580 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234132610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234132653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3036;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0005;THETA=0.0002;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 234132662 rs11372267 A AC 2837 PASS INDEL;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0338;AVGPOST=0.9992;RSQ=0.9911;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234132692 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3677;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0005;THETA=0.0026;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 234132835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6506;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234132924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3607;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 234132963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7116;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234132964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234133074 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3609;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0006;THETA=0.0002;AC=788;AN=2184 GT:DS:GL:BD 0.36080587 0
1 234133122 . G GA 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8177;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234133139 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2505;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 234133500 . CT C 34 PASS INDEL;BAVGPOST=0.985;BRSQ=0.428;LDAF=0.0298;AVGPOST=0.9582;RSQ=0.4445;ERATE=0.0079;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234133522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0522;AVGPOST=0.9967;RSQ=0.9774;ERATE=0.0004;THETA=0.0005;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 234133526 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2206;AVGPOST=0.9962;RSQ=0.9918;ERATE=0.0008;THETA=0.0002;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 234133664 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.637;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3785;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234133790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5023;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234133794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2200;AVGPOST=0.9984;RSQ=0.9966;ERATE=0.0005;THETA=0.0004;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 234133831 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0309;AVGPOST=0.9921;RSQ=0.9090;ERATE=0.0007;THETA=0.0003;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 234133832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2205;AVGPOST=0.9975;RSQ=0.9951;ERATE=0.0004;THETA=0.0004;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 234133846 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3367;AVGPOST=0.9978;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 234133856 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234133870 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4403;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234133879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4520;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234133889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2207;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=483;AN=2184 GT:DS:GL:BD 0.22115384 0
1 234133975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2197;AVGPOST=0.9984;RSQ=0.9968;ERATE=0.0005;THETA=0.0006;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 234134033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5316;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234134068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.979;LDAF=0.2138;AVGPOST=0.9911;RSQ=0.9832;ERATE=0.0011;THETA=0.0005;AC=469;AN=2184 GT:DS:GL:BD 0.21474358 0
1 234134182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0878;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 234134187 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2194;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0004;THETA=0.0009;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 234134192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.5938;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 234134197 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0116;AVGPOST=0.9995;RSQ=0.9796;ERATE=0.0003;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234134200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9481;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234134261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234134418 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234134436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2194;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0001;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 234134520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2344;AVGPOST=0.9975;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=510;AN=2184 GT:DS:GL:BD 0.23351648 0
1 234134570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.7843;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234134594 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9909;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234134709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234134725 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0129;AVGPOST=0.9993;RSQ=0.9790;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234134728 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2294;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=502;AN=2184 GT:DS:GL:BD 0.22985348 0
1 234134757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234134822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2200;AVGPOST=0.9981;RSQ=0.9961;ERATE=0.0006;THETA=0.0004;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 234134850 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234134893 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234134896 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0239;AVGPOST=0.9996;RSQ=0.9931;ERATE=0.0003;THETA=0.0014;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234134949 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234134960 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8624;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234134961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.802;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7739;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234134962 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0180;AVGPOST=0.9977;RSQ=0.9479;ERATE=0.0003;THETA=0.0002;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234134963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9736;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234135028 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7709;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8534;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234135053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2243;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0005;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 234135115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.957;LDAF=0.2055;AVGPOST=0.9875;RSQ=0.9744;ERATE=0.0003;THETA=0.0003;AC=454;AN=2184 GT:DS:GL:BD 0.20787546 0
1 234135148 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3746;AVGPOST=0.9991;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=815;AN=2184 GT:DS:GL:BD 0.37316850 0
1 234135151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135215 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2237;AVGPOST=0.9991;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 234135243 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135271 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2239;AVGPOST=0.9996;RSQ=0.9990;ERATE=0.0004;THETA=0.0002;AC=490;AN=2184 GT:DS:GL:BD 0.22435898 0
1 234135353 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7223;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234135463 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9745;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234135587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234135616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8990;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234135662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0029;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234135664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0413;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0004;THETA=0.0001;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234135738 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.794;LDAF=0.0081;AVGPOST=0.9968;RSQ=0.8487;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234135758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.5999;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234135919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0045;AVGPOST=0.9995;RSQ=0.9511;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234135936 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9607;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234135943 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0067;AVGPOST=0.9979;RSQ=0.8732;ERATE=0.0004;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234136140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9250;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234136162 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7121;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234136171 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9474;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234136185 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6694;AVGPOST=0.9967;RSQ=0.9937;ERATE=0.0007;THETA=0.0003;AC=1460;AN=2184 GT:DS:GL:BD 0.66849816 1
1 234136188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0494;AVGPOST=0.9997;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234136487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9333;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234136552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0306;AVGPOST=0.9989;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 234136646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234136719 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234136760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.7076;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234136776 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.5038;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234136808 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6768;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234136859 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0027;AVGPOST=0.9996;RSQ=0.9362;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234136877 . C CCTAT 588 PASS INDEL;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9167;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234136962 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2050;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 234136989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234137082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9892;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234137143 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9268;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234137315 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6301;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234137367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234137370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6461;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234137469 rs55853866 AG A 35111 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2488;AVGPOST=0.9970;RSQ=0.9942;ERATE=0.0005;THETA=0.0005;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 234137507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234137565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0156;AVGPOST=0.9989;RSQ=0.9728;ERATE=0.0005;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234137567 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234137666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7828;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234137716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.0936;AVGPOST=0.9984;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=204;AN=2184 GT:DS:GL:BD 0.09340660 0
1 234137724 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7267;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234137726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1277;AVGPOST=0.9987;RSQ=0.9956;ERATE=0.0003;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 234137756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.1970;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=430;AN=2184 GT:DS:GL:BD 0.19688645 0
1 234137769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234137779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8912;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234137899 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.6223;AVGPOST=0.9971;RSQ=0.9953;ERATE=0.0005;THETA=0.0004;AC=1358;AN=2184 GT:DS:GL:BD 0.62179488 1
1 234137929 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5708;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234138279 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7865;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234138289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4888;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138317 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0117;AVGPOST=0.9979;RSQ=0.9242;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234138345 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1117;AVGPOST=0.9947;RSQ=0.9832;ERATE=0.0003;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234138346 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1116;AVGPOST=0.9947;RSQ=0.9833;ERATE=0.0003;THETA=0.0001;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234138346 . A AT 9301 PASS INDEL;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1118;AVGPOST=0.9941;RSQ=0.9812;ERATE=0.0004;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234138404 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138532 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234138767 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234138829 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8288;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234138874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2464;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 234139316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6894;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234139378 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234139413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234139440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234139448 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9110;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234139555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7140;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234139556 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0038;AVGPOST=0.9987;RSQ=0.8428;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234139581 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2038;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0001;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 234139610 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0347;AVGPOST=0.9951;RSQ=0.9518;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234139689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234139729 . CTTATA C 59 PASS INDEL;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234139785 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9870;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234139863 . GCAAA G 283 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9278;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234139907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0062;AVGPOST=0.9983;RSQ=0.8987;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234140043 . CA C 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5403;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234140246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8118;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234140325 rs71574893 T TC 60018 PASS INDEL;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.6096;AVGPOST=0.9751;RSQ=0.9617;ERATE=0.0034;THETA=0.0025;AC=1330;AN=2184 GT:DS:GL:BD 0.60897434 1
1 234140361 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4707;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234140430 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8415;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234140545 . GC G 31 PASS INDEL;BAVGPOST=0.960;BRSQ=0.038;LDAF=0.0786;AVGPOST=0.8929;RSQ=0.4280;ERATE=0.0050;THETA=0.0003;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 234140795 . GA G 34 PASS INDEL;BAVGPOST=0.999;BRSQ=0.518;LDAF=0.0030;AVGPOST=0.9955;RSQ=0.4610;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234140901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1291;AVGPOST=0.9958;RSQ=0.9864;ERATE=0.0011;THETA=0.0005;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 234140999 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0037;AVGPOST=0.9963;RSQ=0.5876;ERATE=0.0006;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234141011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6496;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234141248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.668;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7986;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234141264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1277;AVGPOST=0.9990;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 234141598 . GC G 433 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234141698 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.558;LDAF=0.0040;AVGPOST=0.9947;RSQ=0.5258;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234141783 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234141792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0130;AVGPOST=0.9990;RSQ=0.9674;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234141913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.651;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5457;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234141954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9741;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234142025 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234142204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5899;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234142206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5828;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234142216 rs35395216 CG C 9575 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0577;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 234142242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1204;AVGPOST=0.9992;RSQ=0.9965;ERATE=0.0004;THETA=0.0002;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 234142316 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5330;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234142321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9314;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234142437 MERGED_DEL_2_7739 TTGCAGAAGCCAGCATGGCTGCAGCAGAATGAGGGAGTGGAAGAAGAGATGAGAGCTGGGTACAAAGCATGAGGAGTAGAGGCCTGGTAAGGACTTTGCTTTTATGCTGAATGAAGTGGGGAGCTACCATAACTGTCATTGGACCTTCCTCCTGTGGCTATTCACTTGTATATTAAGTTCATTGATGGGA T . . SV;BAVGPOST=0.997;BRSQ=0.710;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.6754;ERATE=0.0006;THETA=0.0003;CIEND=-125,33;CIPOS=-151,30;END=234143182;HOMLEN=106;HOMSEQ=TGCAGAAGCCAGCATGGCTGCAGCAGAATGAGGGAGT GT:DS:GL:BD 0.00228938 0
1 234142575 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0819;AVGPOST=0.9989;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 234142671 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234142710 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0340;AVGPOST=0.9991;RSQ=0.9918;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234142786 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2464;AVGPOST=0.9979;RSQ=0.9956;ERATE=0.0006;THETA=0.0003;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 234142803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0052;AVGPOST=0.9987;RSQ=0.8925;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234142958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234142964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.8876;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234142999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5574;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234143041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234143130 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0177;AVGPOST=0.9980;RSQ=0.9583;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234143175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.7162;AVGPOST=0.9974;RSQ=0.9954;ERATE=0.0005;THETA=0.0003;AC=1564;AN=2184 GT:DS:GL:BD 0.71611720 1
1 234143181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234143185 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0179;AVGPOST=0.9989;RSQ=0.9759;ERATE=0.0004;THETA=0.0050;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234143315 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0003;THETA=0.0022;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234143320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9116;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234143445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.1365;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0003;THETA=0.0025;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 234143885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.959;LDAF=0.1117;AVGPOST=0.9940;RSQ=0.9794;ERATE=0.0003;THETA=0.0003;AC=244;AN=2184 GT:DS:GL:BD 0.11172161 0
1 234143903 . A AT 35908 PASS INDEL;BAVGPOST=0.984;BRSQ=0.972;LDAF=0.6763;AVGPOST=0.9911;RSQ=0.9851;ERATE=0.0015;THETA=0.0002;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 234143905 rs11394835 T TC 104940 PASS INDEL;BAVGPOST=0.985;BRSQ=0.972;LDAF=0.6777;AVGPOST=0.9954;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=1480;AN=2184 GT:DS:GL:BD 0.67765570 1
1 234143961 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234143965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234143998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.4232;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=922;AN=2184 GT:DS:GL:BD 0.42216116 0
1 234144075 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0288;AVGPOST=0.9990;RSQ=0.9876;ERATE=0.0003;THETA=0.0003;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 234144079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234144121 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9509;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234144123 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234144157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234144169 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234144238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234144266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8145;ERATE=0.0003;THETA=0.0026;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234144297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0131;AVGPOST=0.9985;RSQ=0.9527;ERATE=0.0005;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234144326 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1947;AVGPOST=0.9986;RSQ=0.9966;ERATE=0.0005;THETA=0.0032;AC=425;AN=2184 GT:DS:GL:BD 0.19459707 0
1 234144370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0975;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0003;THETA=0.0005;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 234144379 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234144538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0335;AVGPOST=0.9996;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234144597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9311;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234144764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0239;AVGPOST=0.9997;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234144895 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6589;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234145101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0367;AVGPOST=0.9995;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234145116 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8596;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234145187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234145215 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1252;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234145223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.629;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234145224 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0173;AVGPOST=0.9997;RSQ=0.9925;ERATE=0.0003;THETA=0.0011;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234145363 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8650;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234145373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234145414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0003;THETA=0.0014;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234145415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9083;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234145504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8458;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234145518 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0166;AVGPOST=0.9988;RSQ=0.9749;ERATE=0.0004;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234145588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.793;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9569;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234145600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.785;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234145650 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234145652 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9359;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234145763 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.812;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.8880;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234145899 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0598;AVGPOST=0.9940;RSQ=0.9575;ERATE=0.0004;THETA=0.0008;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234146354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0076;AVGPOST=0.9979;RSQ=0.8901;ERATE=0.0004;THETA=0.0018;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234146384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8767;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234146421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7607;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234146424 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9996;RSQ=0.9647;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234146663 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1256;AVGPOST=0.9982;RSQ=0.9936;ERATE=0.0004;THETA=0.0016;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 234146693 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.5762;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234146726 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234146828 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147089 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234147097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0020;AVGPOST=0.9982;RSQ=0.6348;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234147235 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.7072;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234147242 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8972;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234147250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9807;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234147298 . C CA 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147507 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147525 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6526;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147554 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0029;AVGPOST=0.9971;RSQ=0.6001;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234147676 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.971;LDAF=0.4014;AVGPOST=0.9791;RSQ=0.9708;ERATE=0.0024;THETA=0.0004;AC=877;AN=2184 GT:DS:GL:BD 0.40155679 0
1 234147703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.786;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9125;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234147706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234147710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147862 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.862;LDAF=0.0279;AVGPOST=0.9921;RSQ=0.8958;ERATE=0.0003;THETA=0.0011;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234147867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234147964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0326;AVGPOST=0.9981;RSQ=0.9755;ERATE=0.0005;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 234147980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5552;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234147985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8989;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234147997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0069;AVGPOST=0.9976;RSQ=0.8537;ERATE=0.0003;THETA=0.0061;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234148253 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0473;AVGPOST=0.9984;RSQ=0.9871;ERATE=0.0004;THETA=0.0048;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 234148355 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9580;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234148381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0330;AVGPOST=0.9996;RSQ=0.9947;ERATE=0.0003;THETA=0.0021;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234148390 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0098;AVGPOST=0.9982;RSQ=0.9281;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234148403 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.563;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.4994;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234148558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4121;AVGPOST=0.9954;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=902;AN=2184 GT:DS:GL:BD 0.41300365 0
1 234148594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8142;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234148601 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0260;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234148652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.714;LDAF=0.0066;AVGPOST=0.9951;RSQ=0.7258;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234148710 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234148787 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7564;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234148929 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6397;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234149150 . TAAAC T 153 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234149279 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.5368;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234149349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6759;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234149413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1141;AVGPOST=0.9984;RSQ=0.9936;ERATE=0.0003;THETA=0.0004;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 234149638 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5166;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234149704 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1178;AVGPOST=0.9976;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=258;AN=2184 GT:DS:GL:BD 0.11813187 0
1 234149809 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0261;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234149825 . G GA 555 PASS INDEL;BAVGPOST=0.999;BRSQ=0.896;LDAF=0.0062;AVGPOST=0.9974;RSQ=0.8376;ERATE=0.0008;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234149866 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0411;AVGPOST=0.9993;RSQ=0.9931;ERATE=0.0003;THETA=0.0009;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234149881 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7063;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234149910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0260;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234149950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9692;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234150071 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2508;AVGPOST=0.9965;RSQ=0.9926;ERATE=0.0003;THETA=0.0010;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 234150153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5993;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234150184 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0247;AVGPOST=0.9994;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234150241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7597;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234150464 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7142;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234150516 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6160;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234150520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0263;AVGPOST=0.9994;RSQ=0.9903;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234150863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4133;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234151019 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.3887;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234151104 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8342;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234151224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0330;AVGPOST=0.9998;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234151237 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0266;AVGPOST=0.9988;RSQ=0.9852;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234151250 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0073;AVGPOST=0.9982;RSQ=0.9119;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234151266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234151391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234151464 . CAT C 205 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8425;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234151674 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234151830 . T TA 1022 PASS INDEL;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0068;AVGPOST=0.9993;RSQ=0.9586;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234151981 . AT A 7 PASS INDEL;BAVGPOST=0.946;BRSQ=0.015;LDAF=0.0769;AVGPOST=0.8795;RSQ=0.3442;ERATE=0.0061;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234152086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0796;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234152124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234152153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7986;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234152572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.729;LDAF=0.0040;AVGPOST=0.9977;RSQ=0.7858;ERATE=0.0009;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234152598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7610;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234152628 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234152669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8474;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234152713 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.870;LDAF=0.0074;AVGPOST=0.9984;RSQ=0.9199;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234152764 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6566;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234152795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0797;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234152903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234152939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1082;AVGPOST=0.9979;RSQ=0.9916;ERATE=0.0003;THETA=0.0006;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234153015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5198;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234153068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9296;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234153133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0045;AVGPOST=0.9965;RSQ=0.7028;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234153188 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4359;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234153255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.3689;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234153274 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0094;AVGPOST=0.9945;RSQ=0.7769;ERATE=0.0005;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234153295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4124;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234153353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.858;LDAF=0.0468;AVGPOST=0.9728;RSQ=0.7964;ERATE=0.0008;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 234153391 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.981;LDAF=0.1087;AVGPOST=0.9971;RSQ=0.9888;ERATE=0.0004;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234153408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.944;LDAF=0.0817;AVGPOST=0.9944;RSQ=0.9711;ERATE=0.0011;THETA=0.0025;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 234153409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.662;LDAF=0.0069;AVGPOST=0.9923;RSQ=0.5715;ERATE=0.0014;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234153524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.473;LDAF=0.0050;AVGPOST=0.9926;RSQ=0.4068;ERATE=0.0013;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234153761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0362;AVGPOST=0.9996;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234153924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8847;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234153970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0330;AVGPOST=0.9996;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234153983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9195;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234154066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0329;AVGPOST=0.9999;RSQ=0.9980;ERATE=0.0003;THETA=0.0013;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234154095 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234154215 . TC T 149 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234154223 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0361;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234154224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0253;AVGPOST=0.9994;RSQ=0.9907;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234154335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0185;AVGPOST=0.9991;RSQ=0.9837;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234154436 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5624;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234154643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234154775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9362;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234154862 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1231;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 234154902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234154952 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0004;AVGPOST=0.9993;RSQ=0.1256;ERATE=0.0003;THETA=0.0013;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234155021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0090;AVGPOST=0.9989;RSQ=0.9520;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234155088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9999;RSQ=0.9996;ERATE=0.0003;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234155113 rs10631137 T TGA 24089 PASS INDEL;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1905;AVGPOST=0.9952;RSQ=0.9894;ERATE=0.0023;THETA=0.0004;AC=418;AN=2184 GT:DS:GL:BD 0.19139194 0
1 234155138 . CAG C 554 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9107;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234155296 . GT G 1085 PASS INDEL;BAVGPOST=0.995;BRSQ=0.873;LDAF=0.0235;AVGPOST=0.9908;RSQ=0.8482;ERATE=0.0010;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234155303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0537;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0004;THETA=0.0005;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 234155362 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234155392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0023;AVGPOST=0.9988;RSQ=0.7629;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234155407 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9695;ERATE=0.0003;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234155561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0334;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234155589 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234155725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234155735 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0364;AVGPOST=0.9994;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234155821 . CTA C 4396 PASS INDEL;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0211;AVGPOST=0.9975;RSQ=0.9471;ERATE=0.0004;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234155882 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.604;LDAF=0.0124;AVGPOST=0.9829;RSQ=0.5106;ERATE=0.0035;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234155943 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234156081 . A AC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0028;AVGPOST=0.9952;RSQ=0.3860;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234156106 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234156194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1082;AVGPOST=0.9988;RSQ=0.9946;ERATE=0.0005;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234156219 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1969;AVGPOST=0.9952;RSQ=0.9888;ERATE=0.0007;THETA=0.0004;AC=428;AN=2184 GT:DS:GL:BD 0.19597070 0
1 234156255 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.968;LDAF=0.0371;AVGPOST=0.9977;RSQ=0.9800;ERATE=0.0004;THETA=0.0012;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234156477 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.8294;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234156636 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5845;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234156851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.865;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8793;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234156872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234156934 rs111945960 C CCAGACCTTG 20347 PASS INDEL;BAVGPOST=0.981;BRSQ=0.915;LDAF=0.1127;AVGPOST=0.9791;RSQ=0.9317;ERATE=0.0017;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 234156947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0047;AVGPOST=0.9962;RSQ=0.6947;ERATE=0.0005;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234156948 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.601;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5946;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234157118 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234157231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234157415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0873;AVGPOST=0.9995;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 234157478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.947;LDAF=0.0181;AVGPOST=0.9990;RSQ=0.9817;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234157556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234157623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234157643 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234157688 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234157721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234157767 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0152;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234157777 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7359;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234157804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234158008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0004;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234158043 . AAGAG A 209 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8542;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234158159 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.899;LDAF=0.0209;AVGPOST=0.9941;RSQ=0.8886;ERATE=0.0008;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234158215 rs71852512 GT G 55812 PASS INDEL;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.7284;AVGPOST=0.9958;RSQ=0.9924;ERATE=0.0010;THETA=0.0005;AC=1589;AN=2184 GT:DS:GL:BD 0.72756410 1
1 234158356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6404;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234158449 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.745;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5442;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234158495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9289;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234158514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7310;AVGPOST=0.9961;RSQ=0.9933;ERATE=0.0008;THETA=0.0003;AC=1595;AN=2184 GT:DS:GL:BD 0.73031133 1
1 234158543 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0517;AVGPOST=0.9991;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 234158544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7099;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234158570 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4420;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234158618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0345;AVGPOST=0.9994;RSQ=0.9926;ERATE=0.0004;THETA=0.0003;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 234158655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9841;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234158773 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9817;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234158847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6945;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=1515;AN=2184 GT:DS:GL:BD 0.69368130 1
1 234158951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0030;AVGPOST=0.9991;RSQ=0.8793;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234159021 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234159036 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8468;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234159087 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6325;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0005;THETA=0.0002;AC=1380;AN=2184 GT:DS:GL:BD 0.63186812 1
1 234159106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7374;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234159144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.6146;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0004;THETA=0.0005;AC=1339;AN=2184 GT:DS:GL:BD 0.61309522 1
1 234159273 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234159321 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7876;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234159344 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234159428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234159454 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6968;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234159461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7330;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0004;THETA=0.0018;AC=1599;AN=2184 GT:DS:GL:BD 0.73214287 1
1 234159508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234159672 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7264;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234159698 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0339;AVGPOST=0.9996;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234159957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.6227;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234160097 . GC G 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4037;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234160106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0715;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234160110 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234160111 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5611;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234160181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0793;AVGPOST=0.9993;RSQ=0.9964;ERATE=0.0003;THETA=0.0002;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234160339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1084;AVGPOST=0.9984;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234160347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7329;AVGPOST=0.9975;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=1599;AN=2184 GT:DS:GL:BD 0.73214287 1
1 234160467 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7095;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234160488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234160556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234160614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234160661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234160727 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7300;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234161001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234161067 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0049;AVGPOST=0.9983;RSQ=0.8612;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234161118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5285;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234161211 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0123;AVGPOST=0.9973;RSQ=0.9193;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234161265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.6913;ERATE=0.0004;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234161328 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234161346 . TG T 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234161397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8525;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234161512 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9214;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234161626 . C CA 9113 PASS INDEL;BAVGPOST=0.986;BRSQ=0.969;LDAF=0.2428;AVGPOST=0.9888;RSQ=0.9804;ERATE=0.0003;THETA=0.0003;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 234161629 rs56218718 A AG 37305 PASS INDEL;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.2427;AVGPOST=0.9885;RSQ=0.9797;ERATE=0.0003;THETA=0.0002;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 234161630 . T TC 36862 PASS INDEL;BAVGPOST=0.987;BRSQ=0.969;LDAF=0.2431;AVGPOST=0.9881;RSQ=0.9791;ERATE=0.0003;THETA=0.0009;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 234161723 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.660;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6533;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234161730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0198;AVGPOST=0.9991;RSQ=0.9803;ERATE=0.0003;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234161743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2537;AVGPOST=0.9982;RSQ=0.9967;ERATE=0.0004;THETA=0.0004;AC=552;AN=2184 GT:DS:GL:BD 0.25274727 0
1 234161747 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.950;LDAF=0.0333;AVGPOST=0.9949;RSQ=0.9392;ERATE=0.0003;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 234161767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4916;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234161782 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7531;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234161820 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9209;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234161823 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3760;AVGPOST=0.9984;RSQ=0.9974;ERATE=0.0004;THETA=0.0007;AC=820;AN=2184 GT:DS:GL:BD 0.37545788 0
1 234161860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7894;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234161868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0715;AVGPOST=0.9995;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234162144 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0351;AVGPOST=0.9987;RSQ=0.9890;ERATE=0.0003;THETA=0.0006;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234162150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234162162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6295;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5614;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162245 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0350;AVGPOST=0.9984;RSQ=0.9855;ERATE=0.0003;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234162362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234162376 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162550 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2533;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 234162757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234162957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2507;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 234163041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7669;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234163239 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5316;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163353 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9735;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234163399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6188;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163789 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163798 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6466;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234163840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3040;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0007;THETA=0.0004;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234163954 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234163990 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0412;AVGPOST=0.9982;RSQ=0.9862;ERATE=0.0003;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234164017 . CTGT C 97 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.4592;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=1002;AN=2184 GT:DS:GL:BD 0.45879120 0
1 234164190 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7896;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234164227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0418;AVGPOST=0.9960;RSQ=0.9688;ERATE=0.0003;THETA=0.0003;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 234164287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0084;AVGPOST=0.9986;RSQ=0.9384;ERATE=0.0003;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234164343 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0354;AVGPOST=0.9993;RSQ=0.9922;ERATE=0.0003;THETA=0.0003;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234164383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2273;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0006;THETA=0.0003;AC=497;AN=2184 GT:DS:GL:BD 0.22756410 0
1 234164432 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8525;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234164510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164515 . A AAT 11060 PASS INDEL;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.2983;AVGPOST=0.9906;RSQ=0.9837;ERATE=0.0006;THETA=0.0005;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 234164516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3023;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 234164519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.3023;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 234164640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0714;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234164827 . TC T 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0022;AVGPOST=0.9996;RSQ=0.9270;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234164846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7132;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234164879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2926;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 234164931 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234164937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7110;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234164980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5753;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234165006 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2212;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0004;THETA=0.0007;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 234165257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0251;AVGPOST=0.9985;RSQ=0.9782;ERATE=0.0003;THETA=0.0001;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234165283 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7999;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234165357 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234165409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0217;AVGPOST=0.9995;RSQ=0.9900;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234165481 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234165490 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2896;AVGPOST=0.9968;RSQ=0.9952;ERATE=0.0006;THETA=0.0004;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234165584 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8616;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234165719 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1189;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0006;THETA=0.0002;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234165803 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2218;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0005;THETA=0.0003;AC=486;AN=2184 GT:DS:GL:BD 0.22252747 0
1 234165852 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5204;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234165854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5229;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234165888 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6705;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234165945 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7818;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234166056 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7416;AVGPOST=0.9993;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 234166129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2905;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234166138 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2907;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234166242 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.700;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8646;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234166302 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0114;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234166362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0686;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234166440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234166447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.815;LDAF=0.0061;AVGPOST=0.9970;RSQ=0.8008;ERATE=0.0009;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234166576 . AC A 100 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234166635 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1315;AVGPOST=0.9987;RSQ=0.9964;ERATE=0.0003;THETA=0.0001;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 234166665 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234166752 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7858;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234166807 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2909;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0005;THETA=0.0003;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234166822 . CT C 243 PASS INDEL;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8104;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234166894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234166937 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2907;AVGPOST=0.9992;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234166967 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234167098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5400;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234167136 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7417;AVGPOST=0.9997;RSQ=0.9993;ERATE=0.0003;THETA=0.0048;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 234167196 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234167202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2902;AVGPOST=0.9993;RSQ=0.9988;ERATE=0.0004;THETA=0.0004;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 234167222 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0042;AVGPOST=0.9991;RSQ=0.9173;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234167233 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2900;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 234167236 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2900;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 234167297 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1577;AVGPOST=0.9994;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234167298 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1332;AVGPOST=0.9986;RSQ=0.9964;ERATE=0.0004;THETA=0.0024;AC=290;AN=2184 GT:DS:GL:BD 0.13278389 0
1 234167350 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.774;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4619;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234167428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1079;AVGPOST=0.9992;RSQ=0.9963;ERATE=0.0003;THETA=0.0025;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234167561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0072;AVGPOST=0.9994;RSQ=0.9690;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234167699 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2798;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234167708 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2798;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0004;THETA=0.0002;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234167770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234167793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0110;AVGPOST=0.9984;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234167817 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2801;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0005;THETA=0.0003;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234167836 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8668;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234167843 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2798;AVGPOST=0.9970;RSQ=0.9953;ERATE=0.0006;THETA=0.0002;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234167857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2794;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234167924 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234167991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6550;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9341;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234168031 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.7985;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234168034 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2798;AVGPOST=0.9978;RSQ=0.9969;ERATE=0.0004;THETA=0.0003;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 234168039 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234168104 . A AT 2349 PASS INDEL;BAVGPOST=0.998;BRSQ=0.977;LDAF=0.0354;AVGPOST=0.9955;RSQ=0.9518;ERATE=0.0005;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234168116 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.966;LDAF=0.2652;AVGPOST=0.9663;RSQ=0.9439;ERATE=0.0097;THETA=0.0003;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 234168150 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1579;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 234168151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2819;AVGPOST=0.9975;RSQ=0.9954;ERATE=0.0006;THETA=0.0002;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234168199 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168293 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7479;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234168302 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6596;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168401 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0688;AVGPOST=0.9994;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234168427 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0035;AVGPOST=0.9989;RSQ=0.8690;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234168534 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234168659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1189;AVGPOST=0.9993;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 234168686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5465;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168697 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0217;AVGPOST=0.9993;RSQ=0.9860;ERATE=0.0004;THETA=0.0001;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234168734 . T TA 41 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4899;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168744 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234168915 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0126;AVGPOST=0.9974;RSQ=0.9349;ERATE=0.0003;THETA=0.0001;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234168962 . C CT 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0041;AVGPOST=0.9967;RSQ=0.7067;ERATE=0.0011;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234168964 . T TG 59 PASS INDEL;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0050;AVGPOST=0.9942;RSQ=0.5710;ERATE=0.0022;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234168968 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.982;LDAF=0.2818;AVGPOST=0.9963;RSQ=0.9930;ERATE=0.0011;THETA=0.0003;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 234169053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.690;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234169081 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2906;AVGPOST=0.9983;RSQ=0.9972;ERATE=0.0006;THETA=0.0003;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 234169089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6885;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234169184 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0073;AVGPOST=0.9947;RSQ=0.7336;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234169268 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234169324 . TG T 186 PASS INDEL;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6875;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234169357 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0116;AVGPOST=0.9987;RSQ=0.9543;ERATE=0.0003;THETA=0.0001;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234169385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1195;AVGPOST=0.9995;RSQ=0.9984;ERATE=0.0003;THETA=0.0012;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234169462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2812;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0006;THETA=0.0006;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234169466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234169544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0127;AVGPOST=0.9990;RSQ=0.9663;ERATE=0.0003;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234169696 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234169765 . CTA C 528 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7661;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234169767 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1580;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234169880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234169913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1079;AVGPOST=0.9992;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234169933 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2790;AVGPOST=0.9990;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 234170041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2815;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0002;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234170184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234170260 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2816;AVGPOST=0.9980;RSQ=0.9965;ERATE=0.0004;THETA=0.0003;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234170290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.6708;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234170306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0096;AVGPOST=0.9978;RSQ=0.9121;ERATE=0.0004;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234170359 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.972;LDAF=0.1587;AVGPOST=0.9948;RSQ=0.9857;ERATE=0.0007;THETA=0.0002;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234170360 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.923;LDAF=0.0114;AVGPOST=0.9989;RSQ=0.9521;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234170378 . TGCCTCA T 11715 PASS INDEL;BAVGPOST=0.982;BRSQ=0.932;LDAF=0.1157;AVGPOST=0.9873;RSQ=0.9638;ERATE=0.0021;THETA=0.0003;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 234170382 rs113229325 TCAGCCTCC T 28075 PASS INDEL;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1207;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0004;THETA=0.0003;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 234170385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.937;BRSQ=0.841;LDAF=0.2094;AVGPOST=0.9612;RSQ=0.9280;ERATE=0.0022;THETA=0.0002;AC=460;AN=2184 GT:DS:GL:BD 0.21062271 0
1 234170398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0038;AVGPOST=0.9951;RSQ=0.5224;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234170427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0145;AVGPOST=0.9962;RSQ=0.9113;ERATE=0.0006;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234170534 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1195;AVGPOST=0.9994;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234170698 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0025;AVGPOST=0.9971;RSQ=0.6174;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234170761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1577;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234170826 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8541;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234170887 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2792;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0003;AC=611;AN=2184 GT:DS:GL:BD 0.27976191 0
1 234170940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6530;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234171048 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5747;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234171051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0091;AVGPOST=0.9999;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234171089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9733;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234171222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.7421;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 234171371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7494;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234171468 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234171497 . GCT G 86 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5394;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234171547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5882;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234171579 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5632;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234171651 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.5292;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234171706 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234171714 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2809;AVGPOST=0.9980;RSQ=0.9961;ERATE=0.0004;THETA=0.0002;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234171741 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2468;AVGPOST=0.9980;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 234171759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234171768 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9617;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234171789 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0587;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234171948 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234171954 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5085;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7935;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234172009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234172057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234172139 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172161 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1194;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234172179 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8154;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234172267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172410 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0628;AVGPOST=0.9996;RSQ=0.9970;ERATE=0.0004;THETA=0.0002;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 234172529 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0071;AVGPOST=0.9992;RSQ=0.9470;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234172678 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7510;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234172729 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.632;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6643;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234172777 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234172782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234172880 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0686;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234172937 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4521;AVGPOST=0.9978;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=985;AN=2184 GT:DS:GL:BD 0.45100734 0
1 234172944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.7419;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=1620;AN=2184 GT:DS:GL:BD 0.74175823 1
1 234173096 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7605;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234173102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.2867;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 234173103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.461;LDAF=0.0027;AVGPOST=0.9974;RSQ=0.6301;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234173229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234173357 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8468;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234173358 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9241;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234173362 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8968;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234173532 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0586;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234173598 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1261;AVGPOST=0.9975;RSQ=0.9918;ERATE=0.0005;THETA=0.0003;AC=275;AN=2184 GT:DS:GL:BD 0.12591575 0
1 234173699 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.924;LDAF=0.0325;AVGPOST=0.9942;RSQ=0.9328;ERATE=0.0005;THETA=0.0002;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 234173762 . GGTTA G 10256 PASS INDEL;BAVGPOST=0.892;BRSQ=0.784;LDAF=0.2425;AVGPOST=0.9382;RSQ=0.9109;ERATE=0.0027;THETA=0.0002;AC=538;AN=2184 GT:DS:GL:BD 0.24633700 0
1 234173797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.635;LDAF=0.0056;AVGPOST=0.9945;RSQ=0.5990;ERATE=0.0007;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234173859 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0212;AVGPOST=0.9908;RSQ=0.8345;ERATE=0.0012;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234173970 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.1590;AVGPOST=0.9981;RSQ=0.9934;ERATE=0.0005;THETA=0.0002;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 234174017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.2837;AVGPOST=0.9883;RSQ=0.9789;ERATE=0.0011;THETA=0.0002;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 234174029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1297;AVGPOST=0.9952;RSQ=0.9845;ERATE=0.0009;THETA=0.0004;AC=280;AN=2184 GT:DS:GL:BD 0.12820514 0
1 234174088 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.930;BRSQ=0.432;LDAF=0.0751;AVGPOST=0.9453;RSQ=0.7247;ERATE=0.0016;THETA=0.0002;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234174092 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.440;LDAF=0.0725;AVGPOST=0.9437;RSQ=0.7011;ERATE=0.0010;THETA=0.0003;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234174112 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.886;BRSQ=0.289;LDAF=0.0823;AVGPOST=0.9500;RSQ=0.7572;ERATE=0.0016;THETA=0.0001;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 234174123 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.853;BRSQ=0.746;LDAF=0.6169;AVGPOST=0.8282;RSQ=0.7588;ERATE=0.0123;THETA=0.0004;AC=1409;AN=2184 GT:DS:GL:BD 0.64514655 1
1 234174151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.857;LDAF=0.0924;AVGPOST=0.9757;RSQ=0.8985;ERATE=0.0006;THETA=0.0007;AC=206;AN=2184 GT:DS:GL:BD 0.09432235 0
1 234174256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1262;AVGPOST=0.9920;RSQ=0.9773;ERATE=0.0014;THETA=0.0003;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 234174339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.966;LDAF=0.1530;AVGPOST=0.9854;RSQ=0.9569;ERATE=0.0081;THETA=0.0002;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 234174444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0045;AVGPOST=0.9989;RSQ=0.9152;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234174456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234174520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1243;AVGPOST=0.9989;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 234174521 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234174526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234174583 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234174747 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9998;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234174832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1303;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 234174845 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1078;AVGPOST=0.9998;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234174849 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8752;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234174954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7428;AVGPOST=0.9972;RSQ=0.9948;ERATE=0.0004;THETA=0.0003;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 234175020 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1303;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 234175031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234175230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7554;ERATE=0.0010;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234175283 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1080;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234175290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1277;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=279;AN=2184 GT:DS:GL:BD 0.12774725 0
1 234175430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2543;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0005;THETA=0.0002;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 234175476 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0037;AVGPOST=0.9990;RSQ=0.8903;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234175561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234175742 . TG T 335 PASS INDEL;BAVGPOST=0.772;BRSQ=0.178;LDAF=0.2500;AVGPOST=0.6766;RSQ=0.2589;ERATE=0.0261;THETA=0.0003;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 234176066 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9649;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234176070 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9842;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234176105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9891;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234176110 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=0.9990;RSQ=0.9486;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234176148 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234176199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8333;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234176284 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234176533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234176544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234176560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9903;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234176602 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6840;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=1493;AN=2184 GT:DS:GL:BD 0.68360806 1
1 234176684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9987;RSQ=0.9107;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234176730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234176733 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2909;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0005;THETA=0.0003;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234176739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2905;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234176772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0003;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234176776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.793;LDAF=0.0095;AVGPOST=0.9934;RSQ=0.7562;ERATE=0.0009;THETA=0.0002;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234176784 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234176928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0060;AVGPOST=0.9998;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234176942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8528;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234176996 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8063;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234177017 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234177076 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9904;ERATE=0.0003;THETA=0.0002;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234177152 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234177506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1742;AVGPOST=0.9990;RSQ=0.9980;ERATE=0.0003;THETA=0.0001;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 234177524 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1607;AVGPOST=0.9992;RSQ=0.9976;ERATE=0.0004;THETA=0.0001;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 234177584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234177599 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234177658 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9200;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234177659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3957;AVGPOST=0.9985;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 234177664 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1070;AVGPOST=0.9982;RSQ=0.9938;ERATE=0.0003;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234177672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234177749 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5768;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234177936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234178160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2378;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0004;AC=519;AN=2184 GT:DS:GL:BD 0.23763736 0
1 234178273 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0334;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234178290 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9477;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234178299 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6773;AVGPOST=0.9941;RSQ=0.9914;ERATE=0.0017;THETA=0.0002;AC=1478;AN=2184 GT:DS:GL:BD 0.67673993 1
1 234178313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0028;AVGPOST=0.9996;RSQ=0.9325;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234178319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4876;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234178347 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3960;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0003;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 234178454 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7496;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234178489 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3466;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=755;AN=2184 GT:DS:GL:BD 0.34569597 0
1 234178502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.934;LDAF=0.0190;AVGPOST=0.9982;RSQ=0.9579;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234178524 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7425;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 234178616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234178618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6514;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234178625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9987;RSQ=0.6287;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234178632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9038;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234178660 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1254;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234178710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0628;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 234178722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9995;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234178743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234178817 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234178924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7755;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234179052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0071;AVGPOST=0.9994;RSQ=0.9636;ERATE=0.0003;THETA=0.0001;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234179075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7427;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 234179179 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3965;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0004;THETA=0.0004;AC=866;AN=2184 GT:DS:GL:BD 0.39652014 0
1 234179195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.878;LDAF=0.0201;AVGPOST=0.9986;RSQ=0.9693;ERATE=0.0004;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234179212 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1103;AVGPOST=0.9989;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 234179256 . CAA C 22 PASS INDEL;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4561;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234179321 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7423;AVGPOST=0.9968;RSQ=0.9938;ERATE=0.0006;THETA=0.0005;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 234179532 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.6886;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234179619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234179688 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0687;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234179862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0178;AVGPOST=0.9989;RSQ=0.9815;ERATE=0.0003;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234179991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0161;AVGPOST=0.9995;RSQ=0.9865;ERATE=0.0003;THETA=0.0003;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234180297 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.1684;ERATE=0.0004;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234180327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5740;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234180365 . A AT 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5142;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234180536 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234180542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2921;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0007;THETA=0.0007;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 234180668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0056;AVGPOST=0.9980;RSQ=0.8716;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234180679 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234180786 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1252;AVGPOST=0.9996;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234181021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6335;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234181081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9150;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234181152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234181433 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9920;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234181445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1608;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 234181469 rs57918903 TA T 1267 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0155;AVGPOST=0.9991;RSQ=0.9733;ERATE=0.0004;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234181497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234181670 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5809;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234181687 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9266;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234181873 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7877;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234181895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234181964 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0247;AVGPOST=0.9991;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234181979 . AT A 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.724;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4997;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234182184 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0181;AVGPOST=0.9984;RSQ=0.9704;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234182197 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234182213 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1598;AVGPOST=0.9974;RSQ=0.9931;ERATE=0.0006;THETA=0.0002;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 234182259 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1095;AVGPOST=0.9966;RSQ=0.9861;ERATE=0.0005;THETA=0.0005;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 234182305 . CTTTG C 192 PASS INDEL;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7810;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234182362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.6349;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234182415 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.734;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5405;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234182430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.0364;AVGPOST=0.9982;RSQ=0.9808;ERATE=0.0005;THETA=0.0006;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234182815 . G GT 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.0024;AVGPOST=0.9962;RSQ=0.4232;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234182854 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0049;AVGPOST=0.9969;RSQ=0.7582;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234182918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234182979 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0929;AVGPOST=0.9978;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234182988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0335;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234183129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0445;AVGPOST=0.9995;RSQ=0.9945;ERATE=0.0003;THETA=0.0004;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234183223 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0083;AVGPOST=0.9989;RSQ=0.9553;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234183249 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0062;AVGPOST=0.9988;RSQ=0.9274;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234183250 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0062;AVGPOST=0.9988;RSQ=0.9247;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234183426 . TAC T 71 PASS INDEL;BAVGPOST=0.990;BRSQ=0.643;LDAF=0.0203;AVGPOST=0.9782;RSQ=0.5601;ERATE=0.0098;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234183444 rs5781776 TAC T 26764 PASS INDEL;BAVGPOST=0.984;BRSQ=0.967;LDAF=0.2695;AVGPOST=0.9597;RSQ=0.9330;ERATE=0.0166;THETA=0.0001;AC=571;AN=2184 GT:DS:GL:BD 0.26144689 0
1 234183468 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234183513 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0022;AVGPOST=0.9999;RSQ=0.9736;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234183575 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1630;AVGPOST=0.9997;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 234183648 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234183681 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0920;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234183692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234183709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.2394;AVGPOST=0.9952;RSQ=0.9911;ERATE=0.0006;THETA=0.0004;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 234183780 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.9885;AVGPOST=0.9996;RSQ=0.9846;ERATE=0.0003;THETA=0.0003;AC=2159;AN=2184 GT:DS:GL:BD 0.98855311 1
1 234183915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0920;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234183921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9711;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234183957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234184053 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1615;AVGPOST=0.9985;RSQ=0.9955;ERATE=0.0004;THETA=0.0005;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 234184153 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234184326 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9035;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234184440 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0588;AVGPOST=0.9989;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234184491 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7423;AVGPOST=0.9969;RSQ=0.9937;ERATE=0.0006;THETA=0.0002;AC=1621;AN=2184 GT:DS:GL:BD 0.74221611 1
1 234184494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.979;LDAF=0.0356;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234184643 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234184679 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234184712 . ACTTGT A 1715 PASS INDEL;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0100;AVGPOST=0.9988;RSQ=0.9512;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234184754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8559;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234184788 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.7280;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234184795 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0674;AVGPOST=0.9983;RSQ=0.9902;ERATE=0.0003;THETA=0.0008;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234184808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0055;AVGPOST=0.9981;RSQ=0.8841;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234184826 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234184960 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234184965 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234184986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234185033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9365;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234185048 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8470;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234185148 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234185155 . T TGC 394 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.8042;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234185198 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234185214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8628;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234185319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2863;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0003;THETA=0.0009;AC=623;AN=2184 GT:DS:GL:BD 0.28525642 0
1 234185536 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.955;LDAF=0.0193;AVGPOST=0.9980;RSQ=0.9602;ERATE=0.0004;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234185645 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234185723 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9986;RSQ=0.8016;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234185876 . T TA 1025 PASS INDEL;BAVGPOST=0.991;BRSQ=0.789;LDAF=0.0205;AVGPOST=0.9946;RSQ=0.8950;ERATE=0.0007;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234185911 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0160;AVGPOST=0.9988;RSQ=0.9692;ERATE=0.0003;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234186361 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7515;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234186387 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.516;LDAF=0.0025;AVGPOST=0.9963;RSQ=0.4845;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234186462 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5763;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234186519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.7793;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234186661 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0022;AVGPOST=0.9975;RSQ=0.6072;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234186689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0149;AVGPOST=0.9991;RSQ=0.9739;ERATE=0.0004;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234186697 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.7951;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234186816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7223;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234187045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9340;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234187187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0350;AVGPOST=0.9967;RSQ=0.9616;ERATE=0.0008;THETA=0.0005;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234187195 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0067;AVGPOST=0.9979;RSQ=0.8601;ERATE=0.0006;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234187283 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234187344 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9483;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234187356 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0691;AVGPOST=0.9991;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 234187391 . TG T 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6526;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234187421 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.629;LDAF=0.0063;AVGPOST=0.9937;RSQ=0.6253;ERATE=0.0006;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234187555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9993;RSQ=0.9798;ERATE=0.0004;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234187566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234187574 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234187589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5665;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234187591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234187603 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0684;AVGPOST=0.9993;RSQ=0.9962;ERATE=0.0003;THETA=0.0002;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234187668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5348;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234187685 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234187686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0071;AVGPOST=0.9989;RSQ=0.9391;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234187690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7895;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234187746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.937;LDAF=0.1233;AVGPOST=0.9964;RSQ=0.9860;ERATE=0.0007;THETA=0.0002;AC=272;AN=2184 GT:DS:GL:BD 0.12454212 0
1 234187754 . T TA 94 PASS INDEL;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6763;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234187757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5932;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234187816 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0154;AVGPOST=0.9994;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234187965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.7928;ERATE=0.0005;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234188010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0056;AVGPOST=0.9976;RSQ=0.8487;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234188063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234188089 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.9962;AVGPOST=0.9979;RSQ=0.7548;ERATE=0.0004;THETA=0.0003;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 234188184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.1609;AVGPOST=0.9974;RSQ=0.9917;ERATE=0.0005;THETA=0.0004;AC=352;AN=2184 GT:DS:GL:BD 0.16117217 0
1 234188189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0091;AVGPOST=0.9982;RSQ=0.9128;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234188237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0665;AVGPOST=0.9992;RSQ=0.9953;ERATE=0.0003;THETA=0.0012;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 234188310 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6362;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234188319 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234188362 . G GT 482 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9165;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234188433 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0037;AVGPOST=0.9978;RSQ=0.7426;ERATE=0.0005;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234188470 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1588;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 234188718 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0086;AVGPOST=0.9993;RSQ=0.9594;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234188758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.929;LDAF=0.0575;AVGPOST=0.9907;RSQ=0.9381;ERATE=0.0007;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234188873 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0578;AVGPOST=0.9992;RSQ=0.9941;ERATE=0.0003;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234188888 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4332;ERATE=0.0007;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234188925 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.486;LDAF=0.0217;AVGPOST=0.9731;RSQ=0.5104;ERATE=0.0074;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234188948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.654;LDAF=0.0188;AVGPOST=0.9931;RSQ=0.8491;ERATE=0.0010;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234188968 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.784;LDAF=0.0073;AVGPOST=0.9973;RSQ=0.8581;ERATE=0.0004;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234189102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0152;AVGPOST=0.9997;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234189136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0004;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234189158 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.940;LDAF=0.0550;AVGPOST=0.9951;RSQ=0.9680;ERATE=0.0003;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 234189261 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.961;LDAF=0.0372;AVGPOST=0.9906;RSQ=0.9080;ERATE=0.0003;THETA=0.0003;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234189283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.983;LDAF=0.2456;AVGPOST=0.9949;RSQ=0.9900;ERATE=0.0003;THETA=0.0004;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 234189803 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.5029;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234189839 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6671;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234189883 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0090;AVGPOST=0.9993;RSQ=0.9666;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234189970 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1579;AVGPOST=0.9981;RSQ=0.9938;ERATE=0.0006;THETA=0.0004;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234189988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9485;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234189991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6335;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234190011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6673;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234190032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234190178 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234190196 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0588;AVGPOST=0.9973;RSQ=0.9855;ERATE=0.0004;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 234190199 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8329;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234190258 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234190308 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0054;AVGPOST=0.9996;RSQ=0.9720;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234190353 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7841;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234190394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234190442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9617;ERATE=0.0004;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234190463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234190629 . G GGTCT 359 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0034;AVGPOST=0.9960;RSQ=0.5272;ERATE=0.0009;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234190639 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0017;AVGPOST=0.9981;RSQ=0.5418;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234190686 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5173;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234190693 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234190719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234190772 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7386;AVGPOST=0.9897;RSQ=0.9804;ERATE=0.0011;THETA=0.0005;AC=1619;AN=2184 GT:DS:GL:BD 0.74130034 1
1 234190891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0029;AVGPOST=0.9983;RSQ=0.7877;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191052 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0024;AVGPOST=0.9973;RSQ=0.5479;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234191154 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1081;AVGPOST=0.9990;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 234191255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8746;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234191259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234191272 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5595;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234191351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3330;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234191445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0034;AVGPOST=0.9968;RSQ=0.6023;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191477 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5776;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234191478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.696;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7384;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234191488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.779;LDAF=0.0074;AVGPOST=0.9974;RSQ=0.8593;ERATE=0.0004;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234191490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.714;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.5826;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234191567 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0449;AVGPOST=0.9980;RSQ=0.9840;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234191661 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191738 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.898;LDAF=0.0150;AVGPOST=0.9959;RSQ=0.8851;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234191745 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191766 . G GT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.5285;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234191777 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8684;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234191898 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234191988 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8362;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234192003 . GAT G 5451 PASS INDEL;BAVGPOST=0.954;BRSQ=0.893;LDAF=0.2533;AVGPOST=0.9552;RSQ=0.9210;ERATE=0.0022;THETA=0.0006;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 234192005 . TATA T 37120 PASS INDEL;BAVGPOST=0.975;BRSQ=0.945;LDAF=0.2698;AVGPOST=0.9761;RSQ=0.9609;ERATE=0.0012;THETA=0.0002;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 234192009 rs79437702 ATAT A 10673 PASS INDEL;BAVGPOST=0.974;BRSQ=0.943;LDAF=0.2674;AVGPOST=0.9780;RSQ=0.9629;ERATE=0.0007;THETA=0.0004;AC=591;AN=2184 GT:DS:GL:BD 0.27060440 0
1 234192010 . TATTA T 159 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0039;AVGPOST=0.9966;RSQ=0.6555;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234192102 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0690;AVGPOST=0.9989;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234192178 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234192205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.6962;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234192214 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234192276 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7270;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234192281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234192311 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234192664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0034;AVGPOST=0.9981;RSQ=0.7565;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234192684 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.755;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8995;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234192686 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2813;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0005;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234192748 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9241;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234192904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234192993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9822;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234193014 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2812;AVGPOST=0.9971;RSQ=0.9948;ERATE=0.0006;THETA=0.0003;AC=613;AN=2184 GT:DS:GL:BD 0.28067765 0
1 234193098 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234193219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8382;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234193442 . GC G 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234193454 . GTCTT G 8380 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0586;AVGPOST=0.9994;RSQ=0.9955;ERATE=0.0003;THETA=0.0007;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234193568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234193627 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2485;AVGPOST=0.9944;RSQ=0.9906;ERATE=0.0008;THETA=0.0002;AC=545;AN=2184 GT:DS:GL:BD 0.24954212 0
1 234193700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6603;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234193749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234193884 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234193916 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.980;LDAF=0.1569;AVGPOST=0.9979;RSQ=0.9934;ERATE=0.0005;THETA=0.0006;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234193937 . G GT 34 PASS INDEL;BAVGPOST=0.989;BRSQ=0.461;LDAF=0.0174;AVGPOST=0.9818;RSQ=0.5879;ERATE=0.0038;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234193946 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0157;AVGPOST=0.9996;RSQ=0.9881;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234193947 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0069;AVGPOST=0.9967;RSQ=0.8128;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234194074 rs56960667 A AT 2710 PASS INDEL;BAVGPOST=0.611;BRSQ=0.187;LDAF=0.6939;AVGPOST=0.7435;RSQ=0.5040;ERATE=0.0133;THETA=0.0004;AC=1614;AN=2184 GT:DS:GL:BD 0.73901099 1
1 234194156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0102;AVGPOST=0.9985;RSQ=0.9409;ERATE=0.0004;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234194176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194196 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0588;AVGPOST=0.9992;RSQ=0.9941;ERATE=0.0005;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234194247 . TGCTCA T 1363 PASS INDEL;BAVGPOST=0.998;BRSQ=0.898;LDAF=0.0086;AVGPOST=0.9969;RSQ=0.8469;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234194306 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1079;AVGPOST=0.9989;RSQ=0.9949;ERATE=0.0004;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234194360 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6962;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234194394 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0335;AVGPOST=0.9995;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234194410 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7570;ERATE=0.0005;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234194420 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194454 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6784;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194514 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194547 . T TG 1364 PASS INDEL;BAVGPOST=0.992;BRSQ=0.774;LDAF=0.0194;AVGPOST=0.9978;RSQ=0.9553;ERATE=0.0005;THETA=0.0004;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234194550 . G GT 804 PASS INDEL;BAVGPOST=0.995;BRSQ=0.915;LDAF=0.0271;AVGPOST=0.9905;RSQ=0.8721;ERATE=0.0019;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234194591 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1080;AVGPOST=0.9991;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234194667 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7527;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234194685 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0030;AVGPOST=0.9990;RSQ=0.8528;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234194728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234194876 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0044;AVGPOST=0.9981;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234194918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8575;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234194919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4876;AVGPOST=0.9977;RSQ=0.9962;ERATE=0.0008;THETA=0.0003;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 234194979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0049;AVGPOST=0.9956;RSQ=0.6871;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234195145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0587;AVGPOST=0.9994;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234195173 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5030;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234195237 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234195325 . ATAGAGC A 8607 PASS INDEL;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0644;AVGPOST=0.9947;RSQ=0.9681;ERATE=0.0011;THETA=0.0006;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 234195379 . CA C 1326 PASS INDEL;BAVGPOST=0.982;BRSQ=0.813;LDAF=0.0616;AVGPOST=0.9625;RSQ=0.7412;ERATE=0.0102;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234195409 rs55790666 CAT C 1206 PASS INDEL;BAVGPOST=0.983;BRSQ=0.787;LDAF=0.0577;AVGPOST=0.9580;RSQ=0.6819;ERATE=0.0136;THETA=0.0005;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 234195558 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9432;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234195581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6723;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234195604 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234195669 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0043;AVGPOST=0.9968;RSQ=0.6908;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234195760 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7511;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234195800 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.8041;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234195895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234196021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0585;AVGPOST=0.9995;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234196188 . GTATT G 61 PASS INDEL;BAVGPOST=0.996;BRSQ=0.702;LDAF=0.0112;AVGPOST=0.9880;RSQ=0.5373;ERATE=0.0037;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234196192 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0032;AVGPOST=0.9984;RSQ=0.8072;ERATE=0.0005;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234196217 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0342;AVGPOST=0.9982;RSQ=0.9817;ERATE=0.0003;THETA=0.0002;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 234196406 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6077;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234196567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234196581 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9919;ERATE=0.0003;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234196599 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234196731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0668;AVGPOST=0.9996;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234196807 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234196810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1079;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234196884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.984;LDAF=0.2446;AVGPOST=0.9955;RSQ=0.9916;ERATE=0.0004;THETA=0.0002;AC=536;AN=2184 GT:DS:GL:BD 0.24542125 0
1 234196971 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8000;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234196972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234197045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0019;AVGPOST=0.9987;RSQ=0.7565;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234197075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234197115 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9502;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234197123 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8832;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234197169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5222;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234197255 . GA G 877 PASS INDEL;BAVGPOST=0.733;BRSQ=0.554;LDAF=0.3176;AVGPOST=0.7920;RSQ=0.6682;ERATE=0.0201;THETA=0.0003;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 234197288 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.607;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5973;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234197508 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.981;LDAF=0.1577;AVGPOST=0.9979;RSQ=0.9932;ERATE=0.0004;THETA=0.0002;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234197542 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234197572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234197579 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234197612 rs60286451 ATCTTTATCTTT A 3763 PASS INDEL;BAVGPOST=0.996;BRSQ=0.866;LDAF=0.0140;AVGPOST=0.9978;RSQ=0.9358;ERATE=0.0003;THETA=0.0003;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234197642 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0176;AVGPOST=0.9955;RSQ=0.9069;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234197810 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234197908 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9356;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234198042 . CAGT C 218 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234198111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9989;RSQ=0.9216;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234198182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234198222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5796;AVGPOST=0.9983;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=1264;AN=2184 GT:DS:GL:BD 0.57875460 1
1 234198308 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.787;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7478;ERATE=0.0009;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234198316 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5287;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234198423 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0031;AVGPOST=0.9974;RSQ=0.7007;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234198512 . GC G 77 PASS INDEL;BAVGPOST=1.000;BRSQ=0.731;LDAF=0.0047;AVGPOST=0.9944;RSQ=0.5280;ERATE=0.0007;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234198589 . AATTTTTT A 127 PASS INDEL;BAVGPOST=0.994;BRSQ=0.526;LDAF=0.0123;AVGPOST=0.9911;RSQ=0.7286;ERATE=0.0006;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234198637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0196;AVGPOST=0.9944;RSQ=0.9109;ERATE=0.0003;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234198645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0335;AVGPOST=0.9995;RSQ=0.9936;ERATE=0.0004;THETA=0.0005;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234198748 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6675;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234198873 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7525;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234198892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4782;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234198927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7661;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234198965 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1587;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0003;THETA=0.0014;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 234199125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0076;AVGPOST=0.9984;RSQ=0.9134;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234199128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.598;LDAF=0.0027;AVGPOST=0.9961;RSQ=0.4617;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234199261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9052;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234199266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0448;AVGPOST=0.9987;RSQ=0.9885;ERATE=0.0003;THETA=0.0008;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 234199315 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234199511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.8071;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234199738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1252;AVGPOST=0.9996;RSQ=0.9985;ERATE=0.0003;THETA=0.0002;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234199761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0066;AVGPOST=0.9994;RSQ=0.9697;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234199830 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.755;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234199843 . A AT 4 PASS INDEL;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5058;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234199845 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8563;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234199861 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8097;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234199865 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8126;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234199957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6854;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234199982 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9696;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234200081 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4947;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234200085 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0076;AVGPOST=0.9995;RSQ=0.9695;ERATE=0.0005;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234200118 . CT C 71 PASS INDEL;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5296;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234200220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8182;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234200311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0177;AVGPOST=0.9986;RSQ=0.9698;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234200399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0290;AVGPOST=0.9969;RSQ=0.9569;ERATE=0.0004;THETA=0.0006;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234200475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234200605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9671;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234200645 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234200698 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234200717 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234200721 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9233;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234200767 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.877;LDAF=0.0146;AVGPOST=0.9980;RSQ=0.9504;ERATE=0.0004;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234200962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.497;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7735;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234201024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.688;LDAF=0.0036;AVGPOST=0.9972;RSQ=0.6664;ERATE=0.0006;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234201028 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5352;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234201053 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.978;LDAF=0.2465;AVGPOST=0.9831;RSQ=0.9697;ERATE=0.0022;THETA=0.0067;AC=535;AN=2184 GT:DS:GL:BD 0.24496336 0
1 234201054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.978;LDAF=0.0353;AVGPOST=0.9987;RSQ=0.9871;ERATE=0.0003;THETA=0.0007;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234201055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0019;AVGPOST=0.9977;RSQ=0.5650;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234201143 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0105;AVGPOST=0.9984;RSQ=0.9296;ERATE=0.0007;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234201155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0211;AVGPOST=0.9957;RSQ=0.9292;ERATE=0.0005;THETA=0.0007;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234201185 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1271;AVGPOST=0.9980;RSQ=0.9922;ERATE=0.0007;THETA=0.0004;AC=276;AN=2184 GT:DS:GL:BD 0.12637363 0
1 234201327 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234201364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234201409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234201452 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6191;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234201676 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9289;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234201683 . TGTC T 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5374;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234201700 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1085;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0003;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 234201843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234201948 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7952;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234202007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234202027 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1247;AVGPOST=0.9990;RSQ=0.9963;ERATE=0.0003;THETA=0.0053;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 234202037 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234202043 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234202145 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2350;AVGPOST=0.9966;RSQ=0.9934;ERATE=0.0006;THETA=0.0005;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 234202266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9277;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234202378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0060;AVGPOST=0.9987;RSQ=0.9162;ERATE=0.0003;THETA=0.0011;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234202400 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1094;AVGPOST=0.9973;RSQ=0.9904;ERATE=0.0004;THETA=0.0004;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 234202500 . CCT C 21961 PASS INDEL;BAVGPOST=0.970;BRSQ=0.422;LDAF=0.9485;AVGPOST=0.9318;RSQ=0.4450;ERATE=0.0135;THETA=0.0008;AC=2119;AN=2184 GT:DS:GL:BD 0.97023809 1
1 234202553 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0662;AVGPOST=0.9977;RSQ=0.9866;ERATE=0.0005;THETA=0.0005;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 234202603 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0057;AVGPOST=0.9987;RSQ=0.9127;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234202713 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234202763 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7129;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234202765 . TATA T 48 PASS INDEL;BAVGPOST=0.982;BRSQ=0.047;LDAF=0.0224;AVGPOST=0.9662;RSQ=0.4143;ERATE=0.0011;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234202903 rs71574898 A AT 8711 PASS INDEL;BAVGPOST=0.992;BRSQ=0.968;LDAF=0.1165;AVGPOST=0.9829;RSQ=0.9408;ERATE=0.0032;THETA=0.0005;AC=242;AN=2184 GT:DS:GL:BD 0.11080586 0
1 234202906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234202957 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.885;LDAF=0.0211;AVGPOST=0.9956;RSQ=0.9226;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234203005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0620;AVGPOST=0.9985;RSQ=0.9910;ERATE=0.0003;THETA=0.0009;AC=136;AN=2184 GT:DS:GL:BD 0.06227106 0
1 234203025 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0638;AVGPOST=0.9980;RSQ=0.9882;ERATE=0.0004;THETA=0.0002;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 234203085 . T TA 261 PASS INDEL;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8842;ERATE=0.0005;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234203155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2699;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0004;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 234203172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234203222 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234203225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234203556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.756;LDAF=0.9988;AVGPOST=0.9991;RSQ=0.7180;ERATE=0.0003;THETA=0.0009;AC=2182;AN=2184 GT:DS:GL:BD 0.99908423 1
1 234203567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9845;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234203618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1251;AVGPOST=0.9992;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234203729 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234203826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234203975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6072;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234204000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234204030 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8648;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234204153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6592;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234204180 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0245;AVGPOST=0.9986;RSQ=0.9802;ERATE=0.0003;THETA=0.0008;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234204359 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0065;AVGPOST=0.9978;RSQ=0.8619;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234204379 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9589;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234204380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.7812;ERATE=0.0008;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234204468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5726;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234204561 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5825;AVGPOST=0.9821;RSQ=0.9729;ERATE=0.0018;THETA=0.0002;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 234204599 . ATATG A 231 PASS INDEL;BAVGPOST=0.789;BRSQ=0.146;LDAF=0.2217;AVGPOST=0.6972;RSQ=0.2778;ERATE=0.0243;THETA=0.0002;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 234204612 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.246;LDAF=0.0330;AVGPOST=0.9706;RSQ=0.6827;ERATE=0.0011;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 234204624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.721;BRSQ=0.541;LDAF=0.4990;AVGPOST=0.8702;RSQ=0.8173;ERATE=0.0092;THETA=0.0003;AC=1107;AN=2184 GT:DS:GL:BD 0.50686812 1
1 234204632 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.140;LDAF=0.0406;AVGPOST=0.9540;RSQ=0.5523;ERATE=0.0023;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 234204691 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.901;BRSQ=0.066;LDAF=0.0528;AVGPOST=0.9329;RSQ=0.4700;ERATE=0.0023;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234204699 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.858;BRSQ=0.058;LDAF=0.2150;AVGPOST=0.6802;RSQ=0.2219;ERATE=0.0272;THETA=0.0008;AC=181;AN=2184 GT:DS:GL:BD 0.08287546 0
1 234204731 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.459;BRSQ=0.102;LDAF=0.5471;AVGPOST=0.6958;RSQ=0.5228;ERATE=0.0144;THETA=0.0006;AC=1212;AN=2184 GT:DS:GL:BD 0.55494505 1
1 234204789 . T TTAC 227 PASS INDEL;BAVGPOST=0.831;BRSQ=0.034;LDAF=0.1774;AVGPOST=0.7338;RSQ=0.2561;ERATE=0.0159;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234204797 . AAT A 37 PASS INDEL;BAVGPOST=0.886;BRSQ=0.019;LDAF=0.1717;AVGPOST=0.7280;RSQ=0.2185;ERATE=0.0182;THETA=0.0007;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 234204825 . A AAT 1717 PASS INDEL;BAVGPOST=0.665;BRSQ=0.377;LDAF=0.5685;AVGPOST=0.8012;RSQ=0.6857;ERATE=0.0136;THETA=0.0005;AC=1251;AN=2184 GT:DS:GL:BD 0.57280219 1
1 234204835 . A AT 580 PASS INDEL;BAVGPOST=0.776;BRSQ=0.561;LDAF=0.5421;AVGPOST=0.7016;RSQ=0.5181;ERATE=0.0176;THETA=0.0003;AC=1195;AN=2184 GT:DS:GL:BD 0.54716116 1
1 234204882 . AATAT A 90 PASS INDEL;BAVGPOST=0.916;BRSQ=0.071;LDAF=0.0972;AVGPOST=0.8502;RSQ=0.3300;ERATE=0.0078;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234204884 . TATATA T 470 PASS INDEL;BAVGPOST=0.922;BRSQ=0.082;LDAF=0.1108;AVGPOST=0.8321;RSQ=0.3452;ERATE=0.0058;THETA=0.0006;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 234204889 . AATAT A 159 PASS INDEL;BAVGPOST=0.934;BRSQ=0.092;LDAF=0.1112;AVGPOST=0.8319;RSQ=0.3420;ERATE=0.0051;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234204892 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.856;BRSQ=0.707;LDAF=0.5052;AVGPOST=0.6847;RSQ=0.4866;ERATE=0.0318;THETA=0.0004;AC=1123;AN=2184 GT:DS:GL:BD 0.51419413 1
1 234205002 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.429;LDAF=0.0602;AVGPOST=0.9358;RSQ=0.5656;ERATE=0.0049;THETA=0.0008;AC=94;AN=2184 GT:DS:GL:BD 0.04304029 0
1 234205026 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.887;LDAF=0.2430;AVGPOST=0.9753;RSQ=0.9533;ERATE=0.0014;THETA=0.0005;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 234205191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.744;LDAF=0.0038;AVGPOST=0.9971;RSQ=0.6876;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234205277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.644;LDAF=0.0046;AVGPOST=0.9953;RSQ=0.5861;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234205297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0171;AVGPOST=0.9995;RSQ=0.9851;ERATE=0.0004;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234205338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234205379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.970;LDAF=0.1758;AVGPOST=0.9968;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 234205662 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.8279;AVGPOST=0.9988;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=1808;AN=2184 GT:DS:GL:BD 0.82783884 1
1 234205749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5809;AVGPOST=0.9969;RSQ=0.9949;ERATE=0.0007;THETA=0.0008;AC=1267;AN=2184 GT:DS:GL:BD 0.58012819 1
1 234205775 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234205817 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234205857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234205985 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.714;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234206103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8704;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234206164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0144;AVGPOST=0.9973;RSQ=0.9378;ERATE=0.0003;THETA=0.0017;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234206216 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234206247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234206313 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.923;LDAF=0.9843;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0004;AC=2150;AN=2184 GT:DS:GL:BD 0.98443222 1
1 234206319 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234206489 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.3878;AVGPOST=0.9885;RSQ=0.9835;ERATE=0.0005;THETA=0.0019;AC=849;AN=2184 GT:DS:GL:BD 0.38873628 0
1 234206501 rs34460072 GT G 40789 PASS INDEL;BAVGPOST=0.982;BRSQ=0.964;LDAF=0.6558;AVGPOST=0.9838;RSQ=0.9736;ERATE=0.0016;THETA=0.0004;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 234206530 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0024;AVGPOST=0.9968;RSQ=0.5526;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234206593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.981;LDAF=0.2916;AVGPOST=0.9923;RSQ=0.9870;ERATE=0.0005;THETA=0.0030;AC=638;AN=2184 GT:DS:GL:BD 0.29212454 0
1 234206808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8537;ERATE=0.0003;THETA=0.0174;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234206857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8917;ERATE=0.0003;THETA=0.0080;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234206872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0170;AVGPOST=0.9988;RSQ=0.9745;ERATE=0.0003;THETA=0.0027;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234206930 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0064;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234207021 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8233;ERATE=0.0004;THETA=0.0045;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234207259 . CTT C 1416 PASS INDEL;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0085;AVGPOST=0.9974;RSQ=0.8813;ERATE=0.0004;THETA=0.0247;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234207291 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9601;ERATE=0.0003;THETA=0.0084;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234207352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0116;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234207451 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6626;ERATE=0.0003;THETA=0.0139;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234207520 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234207635 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0184;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234207752 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0128;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234207804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0069;AVGPOST=0.9987;RSQ=0.9166;ERATE=0.0004;THETA=0.0045;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234207931 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7748;ERATE=0.0003;THETA=0.0222;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234208125 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9072;ERATE=0.0004;THETA=0.0122;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234208207 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7697;ERATE=0.0003;THETA=0.0119;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234208229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0079;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234208300 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.928;LDAF=0.0795;AVGPOST=0.9835;RSQ=0.9274;ERATE=0.0007;THETA=0.0348;AC=168;AN=2184 GT:DS:GL:BD 0.07692308 0
1 234208328 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9066;ERATE=0.0003;THETA=0.0113;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234208334 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6944;ERATE=0.0004;THETA=0.0195;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234208348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.880;LDAF=0.0128;AVGPOST=0.9972;RSQ=0.9116;ERATE=0.0004;THETA=0.0139;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234208364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8999;ERATE=0.0003;THETA=0.0298;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234208428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0138;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234208570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8890;ERATE=0.0003;THETA=0.0197;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234208675 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0151;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234208803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.948;LDAF=0.0552;AVGPOST=0.9917;RSQ=0.9473;ERATE=0.0017;THETA=0.0242;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 234208910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8858;ERATE=0.0003;THETA=0.0090;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234209015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0032;AVGPOST=0.9989;RSQ=0.8672;ERATE=0.0003;THETA=0.0302;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234209087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.955;BRSQ=0.883;LDAF=0.8152;AVGPOST=0.9591;RSQ=0.9016;ERATE=0.0021;THETA=0.0164;AC=1790;AN=2184 GT:DS:GL:BD 0.81959707 1
1 234209617 . AT A 31 PASS INDEL;BAVGPOST=0.998;BRSQ=0.787;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8001;ERATE=0.0003;THETA=0.0280;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234209667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0311;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234209757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234209797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8135;ERATE=0.0003;THETA=0.0105;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234209841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8595;ERATE=0.0003;THETA=0.0129;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234209850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0067;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234209937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0003;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234210250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.8369;AVGPOST=0.9911;RSQ=0.9756;ERATE=0.0005;THETA=0.0027;AC=1832;AN=2184 GT:DS:GL:BD 0.83882785 1
1 234210346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8657;ERATE=0.0003;THETA=0.0074;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234210465 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9236;ERATE=0.0005;THETA=0.0083;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234210491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2734;AVGPOST=0.9908;RSQ=0.9819;ERATE=0.0004;THETA=0.0013;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234210638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234210657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234210684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8289;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234210715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234210755 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6618;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234210819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.968;LDAF=0.0806;AVGPOST=0.9956;RSQ=0.9787;ERATE=0.0004;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234210829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0115;AVGPOST=0.9974;RSQ=0.9231;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234210840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9084;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234210976 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234211003 . GAAAC G 172 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5650;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234211080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5945;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234211153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6329;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234211244 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0891;AVGPOST=0.9990;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 234211351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234211412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9588;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234211440 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234211471 . AAAAT A 697 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0055;AVGPOST=0.9991;RSQ=0.9291;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234211534 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8480;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234211544 rs75015281 AG A 13365 PASS INDEL;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.0821;AVGPOST=0.9990;RSQ=0.9957;ERATE=0.0003;THETA=0.0005;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 234211580 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234211616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0064;AVGPOST=0.9984;RSQ=0.8887;ERATE=0.0007;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234211627 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2416;AVGPOST=0.9955;RSQ=0.9919;ERATE=0.0003;THETA=0.0006;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 234211671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.663;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7683;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234211742 rs6143675 ACAGACCG A 7812 PASS INDEL;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0348;AVGPOST=0.9950;RSQ=0.9499;ERATE=0.0005;THETA=0.0012;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234211823 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5704;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234211859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0029;AVGPOST=0.9965;RSQ=0.5694;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234211869 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2036;AVGPOST=0.9952;RSQ=0.9905;ERATE=0.0005;THETA=0.0004;AC=444;AN=2184 GT:DS:GL:BD 0.20329671 0
1 234211980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0148;AVGPOST=0.9955;RSQ=0.8746;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234212022 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7149;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234212049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.664;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3191;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234212081 rs3040127 T TGCCTCA 84161 PASS INDEL;BAVGPOST=0.957;BRSQ=0.940;LDAF=0.4945;AVGPOST=0.9729;RSQ=0.9673;ERATE=0.0006;THETA=0.0011;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 234212082 . G GCCTCAC 33851 PASS INDEL;BAVGPOST=0.953;BRSQ=0.933;LDAF=0.4863;AVGPOST=0.9544;RSQ=0.9439;ERATE=0.0045;THETA=0.0002;AC=1071;AN=2184 GT:DS:GL:BD 0.49038461 0
1 234212197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0021;AVGPOST=0.9974;RSQ=0.5235;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234212298 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.620;LDAF=0.0087;AVGPOST=0.9937;RSQ=0.6936;ERATE=0.0008;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234212322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0901;AVGPOST=0.9983;RSQ=0.9916;ERATE=0.0004;THETA=0.0004;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 234212356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.799;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8696;ERATE=0.0003;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234212407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8254;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234212571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0101;AVGPOST=0.9963;RSQ=0.8616;ERATE=0.0005;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234212587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0026;AVGPOST=0.9983;RSQ=0.7513;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234212665 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7041;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234212731 . A AG 2827 PASS INDEL;BAVGPOST=0.927;BRSQ=0.822;LDAF=0.2175;AVGPOST=0.9606;RSQ=0.9259;ERATE=0.0013;THETA=0.0006;AC=480;AN=2184 GT:DS:GL:BD 0.21978022 0
1 234212734 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.919;LDAF=0.2366;AVGPOST=0.9588;RSQ=0.9262;ERATE=0.0052;THETA=0.0005;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 234213408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0266;AVGPOST=0.9985;RSQ=0.9749;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234213409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0038;AVGPOST=0.9992;RSQ=0.9063;ERATE=0.0006;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234213483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5979;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234213563 . C CAG 99 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7530;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234213640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9519;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234213673 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234213675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234213740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234213800 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0264;AVGPOST=0.9998;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 234213985 . CT C 533 PASS INDEL;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0044;AVGPOST=0.9983;RSQ=0.8397;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234214136 . A AT 370 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234214198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.0892;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 234214201 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9121;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234214216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234214234 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0079;AVGPOST=0.9998;RSQ=0.9860;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234214355 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0263;AVGPOST=0.9982;RSQ=0.9737;ERATE=0.0010;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234214471 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0257;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234214474 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8384;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234214513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.882;LDAF=0.0267;AVGPOST=0.9950;RSQ=0.9236;ERATE=0.0003;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234214526 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.654;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4296;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234214555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.1738;AVGPOST=0.9934;RSQ=0.9852;ERATE=0.0005;THETA=0.0005;AC=377;AN=2184 GT:DS:GL:BD 0.17261904 0
1 234214582 . A AC 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.702;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6445;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234214597 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7561;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234214634 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7265;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234214711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.732;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.5682;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234214714 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9814;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234214716 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7820;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234214813 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234214847 rs35948197 T TG 36742 PASS INDEL;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.2396;AVGPOST=0.9957;RSQ=0.9918;ERATE=0.0005;THETA=0.0006;AC=525;AN=2184 GT:DS:GL:BD 0.24038461 0
1 234215005 . TC T 36 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234215138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.933;LDAF=0.0138;AVGPOST=0.9967;RSQ=0.9104;ERATE=0.0004;THETA=0.0011;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234215185 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9518;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234215367 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234215485 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6160;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234215486 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4530;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234215711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5338;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234215786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0075;AVGPOST=0.9995;RSQ=0.9706;ERATE=0.0004;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234216107 . AG A 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7390;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2792;AVGPOST=0.9948;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 234216193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0073;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234216467 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7476;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234216552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.5757;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.674;LDAF=0.0028;AVGPOST=0.9963;RSQ=0.5134;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234216628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9463;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234216682 . ATTGC A 61 PASS INDEL;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0036;AVGPOST=0.9956;RSQ=0.5108;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234216686 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8155;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234216696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6340;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234216996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5224;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217219 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9738;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234217223 . A AG 955 PASS INDEL;BAVGPOST=0.996;BRSQ=0.744;LDAF=0.0094;AVGPOST=0.9944;RSQ=0.7321;ERATE=0.0006;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234217237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.8229;AVGPOST=0.9958;RSQ=0.9893;ERATE=0.0004;THETA=0.0003;AC=1799;AN=2184 GT:DS:GL:BD 0.82371795 1
1 234217242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6195;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0818;AVGPOST=0.9991;RSQ=0.9954;ERATE=0.0003;THETA=0.0012;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 234217385 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6659;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234217447 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.874;LDAF=0.0125;AVGPOST=0.9967;RSQ=0.8842;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234217614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0156;AVGPOST=0.9904;RSQ=0.7771;ERATE=0.0007;THETA=0.0009;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234217629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.492;LDAF=0.0028;AVGPOST=0.9972;RSQ=0.5631;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234217633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.615;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.6901;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234217643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0081;AVGPOST=0.9950;RSQ=0.7806;ERATE=0.0005;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234217694 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0801;AVGPOST=0.9974;RSQ=0.9872;ERATE=0.0005;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 234217793 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.763;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6343;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217794 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217835 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0040;AVGPOST=0.9995;RSQ=0.9462;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234217852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8847;AVGPOST=0.9939;RSQ=0.9784;ERATE=0.0004;THETA=0.0003;AC=1933;AN=2184 GT:DS:GL:BD 0.88507324 1
1 234217878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234217907 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0042;AVGPOST=0.9992;RSQ=0.9174;ERATE=0.0004;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234217968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9445;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234218105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234218147 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.2450;AVGPOST=0.9913;RSQ=0.9823;ERATE=0.0030;THETA=0.0079;AC=532;AN=2184 GT:DS:GL:BD 0.24358974 0
1 234218181 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1009;AVGPOST=0.9915;RSQ=0.9689;ERATE=0.0005;THETA=0.0020;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 234218190 . GT G 133 PASS INDEL;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0114;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234218391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.949;LDAF=0.2809;AVGPOST=0.9746;RSQ=0.9525;ERATE=0.0029;THETA=0.0043;AC=616;AN=2184 GT:DS:GL:BD 0.28205130 0
1 234218439 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.927;LDAF=0.1319;AVGPOST=0.9685;RSQ=0.9097;ERATE=0.0045;THETA=0.0011;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 234218441 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0282;AVGPOST=0.9941;RSQ=0.9293;ERATE=0.0003;THETA=0.0038;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 234218572 . GA G 113 PASS INDEL;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6728;ERATE=0.0006;THETA=0.0050;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234218603 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0050;AVGPOST=0.9988;RSQ=0.8990;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234218738 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0080;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234218739 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234218803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0035;AVGPOST=0.9984;RSQ=0.8326;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234218913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8015;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234218925 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0134;AVGPOST=0.9984;RSQ=0.9512;ERATE=0.0003;THETA=0.0079;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234218955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.639;LDAF=0.0027;AVGPOST=0.9979;RSQ=0.6992;ERATE=0.0005;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234219079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7049;ERATE=0.0004;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234219151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.9929;AVGPOST=0.9985;RSQ=0.9259;ERATE=0.0003;THETA=0.0024;AC=2168;AN=2184 GT:DS:GL:BD 0.99267399 1
1 234219212 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.975;LDAF=0.0944;AVGPOST=0.9949;RSQ=0.9791;ERATE=0.0004;THETA=0.0017;AC=208;AN=2184 GT:DS:GL:BD 0.09523810 0
1 234219314 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234219431 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234219614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.955;LDAF=0.2700;AVGPOST=0.9793;RSQ=0.9719;ERATE=0.0009;THETA=0.0005;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234219692 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.719;LDAF=0.0036;AVGPOST=0.9954;RSQ=0.5180;ERATE=0.0006;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234219744 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.792;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6455;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234219937 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0089;AVGPOST=0.9980;RSQ=0.9097;ERATE=0.0004;THETA=0.0028;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234219964 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0181;AVGPOST=0.9979;RSQ=0.9546;ERATE=0.0004;THETA=0.0022;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234220043 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0078;AVGPOST=0.9996;RSQ=0.9802;ERATE=0.0004;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234220133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6056;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234220214 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0125;AVGPOST=0.9995;RSQ=0.9810;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234220255 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234220379 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234220391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0113;AVGPOST=0.9979;RSQ=0.9351;ERATE=0.0003;THETA=0.0027;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234220418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0081;AVGPOST=0.9991;RSQ=0.9610;ERATE=0.0004;THETA=0.0027;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234220450 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9864;ERATE=0.0003;THETA=0.0035;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234220550 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7754;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234220559 rs34515048 G GAT 56320 PASS INDEL;BAVGPOST=0.981;BRSQ=0.978;LDAF=0.2959;AVGPOST=0.9830;RSQ=0.9779;ERATE=0.0004;THETA=0.0009;AC=647;AN=2184 GT:DS:GL:BD 0.29624543 0
1 234220636 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0271;AVGPOST=0.9986;RSQ=0.9767;ERATE=0.0003;THETA=0.0006;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234220653 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234220737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7511;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234220806 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7263;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234220827 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0065;AVGPOST=0.9997;RSQ=0.9798;ERATE=0.0003;THETA=0.0011;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234221126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234221296 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9322;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234221302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.978;LDAF=0.8826;AVGPOST=0.9931;RSQ=0.9754;ERATE=0.0004;THETA=0.0005;AC=1930;AN=2184 GT:DS:GL:BD 0.88369966 1
1 234221341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234221505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234221606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9502;ERATE=0.0003;THETA=0.0053;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234221658 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234221989 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234222040 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0068;AVGPOST=0.9998;RSQ=0.9881;ERATE=0.0003;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234222045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0051;AVGPOST=0.9976;RSQ=0.8051;ERATE=0.0007;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234222074 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6413;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234222129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234222159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0097;AVGPOST=0.9997;RSQ=0.9867;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234222334 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8411;ERATE=0.0008;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234222479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234222624 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234222668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9647;ERATE=0.0003;THETA=0.0026;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234222674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8768;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234222710 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234222928 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234222930 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9026;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234223060 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9853;ERATE=0.0003;THETA=0.0048;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234223073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6817;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234223179 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234223278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0027;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234223284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0052;AVGPOST=0.9991;RSQ=0.9211;ERATE=0.0003;THETA=0.0017;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234223342 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7426;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234223402 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0064;AVGPOST=0.9998;RSQ=0.9863;ERATE=0.0003;THETA=0.0017;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234223684 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0129;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0003;THETA=0.0006;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234223844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9771;ERATE=0.0003;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234223848 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234223968 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.974;LDAF=0.1258;AVGPOST=0.9926;RSQ=0.9763;ERATE=0.0006;THETA=0.0006;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234223992 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4588;ERATE=0.0004;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234224015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9284;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234224112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7679;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234224158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0207;AVGPOST=0.9977;RSQ=0.9595;ERATE=0.0003;THETA=0.0032;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234224178 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0029;AVGPOST=0.9961;RSQ=0.5088;ERATE=0.0006;THETA=0.0049;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234224346 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0092;AVGPOST=0.9996;RSQ=0.9809;ERATE=0.0003;THETA=0.0048;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234224362 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.7925;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234224372 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9995;RSQ=0.9642;ERATE=0.0003;THETA=0.0018;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234224404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6116;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234224418 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9835;ERATE=0.0003;THETA=0.0017;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234224420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234224429 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234224593 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5623;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234224855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234224898 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0003;THETA=0.0059;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234224923 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0201;AVGPOST=1.0000;RSQ=0.9990;ERATE=0.0003;THETA=0.0047;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234225078 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5697;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234225081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0212;AVGPOST=0.9985;RSQ=0.9706;ERATE=0.0003;THETA=0.0034;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234225122 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8809;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234225137 . AAGC A 4840 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0241;AVGPOST=0.9945;RSQ=0.9143;ERATE=0.0005;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234225368 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234225395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234225447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234225517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0074;AVGPOST=0.9996;RSQ=0.9763;ERATE=0.0003;THETA=0.0042;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234225596 rs112442484 AACAG A 4732 PASS INDEL;BAVGPOST=0.995;BRSQ=0.942;LDAF=0.0204;AVGPOST=0.9979;RSQ=0.9564;ERATE=0.0007;THETA=0.0031;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234225625 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0095;AVGPOST=0.9995;RSQ=0.9798;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234225696 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6980;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234225752 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0202;AVGPOST=0.9997;RSQ=0.9939;ERATE=0.0003;THETA=0.0050;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234225951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0106;AVGPOST=0.9996;RSQ=0.9820;ERATE=0.0003;THETA=0.0017;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234225979 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.654;LDAF=0.0142;AVGPOST=0.9837;RSQ=0.5674;ERATE=0.0056;THETA=0.0015;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234226193 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3770;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234226234 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9628;ERATE=0.0003;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234226282 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.966;LDAF=0.0135;AVGPOST=0.9987;RSQ=0.9661;ERATE=0.0003;THETA=0.0010;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234226408 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.3430;ERATE=0.0003;THETA=0.0048;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234226470 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0119;AVGPOST=0.9973;RSQ=0.9040;ERATE=0.0003;THETA=0.0035;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234226476 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234226590 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7891;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234226620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234226631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0190;AVGPOST=0.9992;RSQ=0.9833;ERATE=0.0003;THETA=0.0037;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234226695 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9791;ERATE=0.0003;THETA=0.0023;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234226705 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9483;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234226737 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5826;ERATE=0.0003;THETA=0.0126;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234226964 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234227005 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9557;ERATE=0.0003;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234227083 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234227084 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.7169;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234227127 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.0896;AVGPOST=0.9948;RSQ=0.9762;ERATE=0.0003;THETA=0.0038;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 234227202 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0074;AVGPOST=0.9998;RSQ=0.9907;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234227367 . T TA 16 PASS INDEL;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234227375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234227580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7877;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234227626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234227790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0041;AVGPOST=0.9968;RSQ=0.6725;ERATE=0.0010;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234227821 . T TG 7 PASS INDEL;BAVGPOST=0.998;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234227971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234228102 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9988;RSQ=0.3638;ERATE=0.0005;THETA=0.0011;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234228154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3145;AVGPOST=0.9895;RSQ=0.9878;ERATE=0.0005;THETA=0.0004;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 234228567 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0067;AVGPOST=0.9980;RSQ=0.8936;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234228780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234228860 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234229059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229278 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9793;ERATE=0.0003;THETA=0.0013;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234229329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5752;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0014;AVGPOST=0.9983;RSQ=0.5580;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234229521 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9271;ERATE=0.0003;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234229533 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6057;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229559 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9397;ERATE=0.0005;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234229595 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229600 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.6131;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234229753 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0116;AVGPOST=0.9967;RSQ=0.8971;ERATE=0.0008;THETA=0.0013;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234229928 . AC A 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5514;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234230064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234230154 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9990;RSQ=0.9714;ERATE=0.0003;THETA=0.0046;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234230295 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0034;AVGPOST=0.9976;RSQ=0.7639;ERATE=0.0005;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234230336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8441;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234230388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4256;AVGPOST=0.9960;RSQ=0.9949;ERATE=0.0010;THETA=0.0005;AC=930;AN=2184 GT:DS:GL:BD 0.42582417 0
1 234230462 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234230611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9410;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234230630 . CAT C 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6404;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234230641 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234230642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6158;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234231104 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0039;AVGPOST=0.9986;RSQ=0.8500;ERATE=0.0003;THETA=0.0035;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234231105 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9628;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234231228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234231274 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7600;ERATE=0.0003;THETA=0.0056;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234231285 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4166;AVGPOST=0.9976;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=910;AN=2184 GT:DS:GL:BD 0.41666666 0
1 234231364 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7959;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234231429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3177;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0005;THETA=0.0005;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 234231460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234231504 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234231664 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234231668 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9530;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234231811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.9134;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234231814 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3269;AVGPOST=0.9986;RSQ=0.9981;ERATE=0.0004;THETA=0.0017;AC=715;AN=2184 GT:DS:GL:BD 0.32738096 0
1 234232006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7921;ERATE=0.0004;THETA=0.0094;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234232020 rs111594630 C CCTCT 81809 PASS INDEL;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3307;AVGPOST=0.9948;RSQ=0.9938;ERATE=0.0009;THETA=0.0011;AC=725;AN=2184 GT:DS:GL:BD 0.33195969 0
1 234232049 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5721;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234232062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7298;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234232219 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234232257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9584;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234232341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0916;AVGPOST=0.9978;RSQ=0.9909;ERATE=0.0003;THETA=0.0010;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 234232523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.5808;AVGPOST=0.9933;RSQ=0.9906;ERATE=0.0006;THETA=0.0013;AC=1269;AN=2184 GT:DS:GL:BD 0.58104396 1
1 234232598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234232605 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8234;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234232609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9412;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234232781 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0033;AVGPOST=0.9975;RSQ=0.7110;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234233076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9458;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234233117 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234233218 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3110;AVGPOST=0.9984;RSQ=0.9979;ERATE=0.0003;THETA=0.0006;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 234233232 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.9073;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234233319 . GT G 32 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234233557 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9936;ERATE=0.0003;THETA=0.0023;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234233584 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9313;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234233674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.616;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234233683 . AG A 448 PASS INDEL;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9662;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234233710 . TTGG T 904 PASS INDEL;BAVGPOST=0.998;BRSQ=0.913;LDAF=0.0044;AVGPOST=0.9991;RSQ=0.9191;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234233780 . TTGG T 109 PASS INDEL;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6599;ERATE=0.0004;THETA=0.0085;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234233883 . ATGG A 181 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0018;AVGPOST=0.9993;RSQ=0.8405;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234234233 . TTGG T 1054 PASS INDEL;BAVGPOST=0.998;BRSQ=0.869;LDAF=0.0072;AVGPOST=0.9979;RSQ=0.8913;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234234269 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234234507 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9850;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234234577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0184;AVGPOST=0.9997;RSQ=0.9926;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234234578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.952;LDAF=0.0237;AVGPOST=0.9967;RSQ=0.9486;ERATE=0.0003;THETA=0.0014;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234234704 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0275;AVGPOST=0.9985;RSQ=0.9792;ERATE=0.0004;THETA=0.0005;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234234736 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234234740 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.8026;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234234891 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.900;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9333;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234234937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9372;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234234939 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9691;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234234940 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0055;AVGPOST=0.9996;RSQ=0.9662;ERATE=0.0003;THETA=0.0040;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234235012 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0363;AVGPOST=0.9981;RSQ=0.9775;ERATE=0.0003;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234235092 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.959;LDAF=0.2965;AVGPOST=0.9824;RSQ=0.9776;ERATE=0.0011;THETA=0.0003;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 234235291 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.939;LDAF=0.5549;AVGPOST=0.9766;RSQ=0.9667;ERATE=0.0006;THETA=0.0004;AC=1221;AN=2184 GT:DS:GL:BD 0.55906594 1
1 234235292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0043;AVGPOST=0.9969;RSQ=0.6688;ERATE=0.0006;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234235327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.774;LDAF=0.0042;AVGPOST=0.9937;RSQ=0.4404;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234235369 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0202;AVGPOST=0.9946;RSQ=0.8970;ERATE=0.0017;THETA=0.0005;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234235436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0136;AVGPOST=0.9992;RSQ=0.9786;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234235638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.7627;AVGPOST=0.9967;RSQ=0.9929;ERATE=0.0004;THETA=0.0003;AC=1665;AN=2184 GT:DS:GL:BD 0.76236266 1
1 234235642 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3493;ERATE=0.0004;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234235763 . GC G 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0037;AVGPOST=0.9946;RSQ=0.4204;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234235857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6768;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234235911 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234236069 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3134;AVGPOST=0.9989;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 234236256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234236257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9435;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234236353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234236399 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9748;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234236642 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6841;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234236655 . C CA 1381 PASS INDEL;BAVGPOST=0.996;BRSQ=0.758;LDAF=0.0067;AVGPOST=0.9976;RSQ=0.8521;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234236677 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234236908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234236946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0127;AVGPOST=0.9974;RSQ=0.9205;ERATE=0.0009;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234236975 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9998;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234236985 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6393;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234237187 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7044;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234237344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.684;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7797;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234237489 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0058;AVGPOST=0.9995;RSQ=0.9607;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234237498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6836;ERATE=0.0014;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234237537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5235;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234237583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0244;AVGPOST=0.9962;RSQ=0.9499;ERATE=0.0003;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234237604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234237631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.879;LDAF=0.0144;AVGPOST=0.9943;RSQ=0.8579;ERATE=0.0005;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234237641 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234237679 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234237689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9752;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234237691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3134;AVGPOST=0.9994;RSQ=0.9992;ERATE=0.0004;THETA=0.0006;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 234237737 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0185;AVGPOST=0.9992;RSQ=0.9824;ERATE=0.0003;THETA=0.0007;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234237856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0060;AVGPOST=0.9997;RSQ=0.9811;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234237885 . CT C 523 PASS INDEL;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0123;AVGPOST=0.9917;RSQ=0.7625;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234237925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234238217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234238423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.2831;AVGPOST=0.9893;RSQ=0.9869;ERATE=0.0003;THETA=0.0003;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 234238424 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.2832;AVGPOST=0.9896;RSQ=0.9871;ERATE=0.0004;THETA=0.0005;AC=622;AN=2184 GT:DS:GL:BD 0.28479853 0
1 234238529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3073;AVGPOST=0.9975;RSQ=0.9969;ERATE=0.0006;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234238578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7848;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234238600 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234238641 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0215;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234238826 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7144;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234239006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0237;AVGPOST=0.9967;RSQ=0.9441;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234239162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.940;LDAF=0.0221;AVGPOST=0.9954;RSQ=0.9255;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234239164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.999;LDAF=0.3076;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0005;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234239327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6746;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239360 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239398 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.735;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8307;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234239447 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6021;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.6398;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234239511 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9561;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234239520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6216;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239561 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5637;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239586 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234239679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9736;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234239913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234239919 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234240099 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8021;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234240149 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8796;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234240152 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234240170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9824;ERATE=0.0003;THETA=0.0011;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234240220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0014;AVGPOST=0.9993;RSQ=0.7822;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234240293 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3084;AVGPOST=0.9986;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234240348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5011;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234240426 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8777;ERATE=0.0003;THETA=0.0019;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234240465 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3082;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0004;THETA=0.0003;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234240613 . AT A 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.661;LDAF=0.0030;AVGPOST=0.9957;RSQ=0.4247;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234240650 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.599;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.5791;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234240651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.655;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8538;ERATE=0.0005;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234240731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0068;AVGPOST=0.9979;RSQ=0.8653;ERATE=0.0005;THETA=0.0012;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234240743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.692;LDAF=0.0106;AVGPOST=0.9907;RSQ=0.6815;ERATE=0.0008;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234240869 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.715;LDAF=0.0214;AVGPOST=0.9881;RSQ=0.7788;ERATE=0.0005;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234240972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.825;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9163;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234240974 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3071;AVGPOST=0.9981;RSQ=0.9980;ERATE=0.0004;THETA=0.0005;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234241017 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.6889;AVGPOST=0.9940;RSQ=0.9900;ERATE=0.0010;THETA=0.0004;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 234241040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234241055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.920;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9448;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234241137 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.6462;AVGPOST=0.9902;RSQ=0.9859;ERATE=0.0004;THETA=0.0002;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 234241138 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.982;LDAF=0.2892;AVGPOST=0.9910;RSQ=0.9888;ERATE=0.0003;THETA=0.0005;AC=634;AN=2184 GT:DS:GL:BD 0.29029304 0
1 234241317 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7403;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234241385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7011;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234241502 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6396;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234241558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0201;AVGPOST=0.9959;RSQ=0.9228;ERATE=0.0006;THETA=0.0002;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234241604 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234241703 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0136;AVGPOST=0.9994;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234241717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0021;AVGPOST=0.9989;RSQ=0.8046;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234241720 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9264;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234241819 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.987;LDAF=0.1456;AVGPOST=0.9984;RSQ=0.9948;ERATE=0.0004;THETA=0.0002;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 234241926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.899;LDAF=0.0317;AVGPOST=0.9965;RSQ=0.9519;ERATE=0.0006;THETA=0.0019;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234242163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0007;AVGPOST=0.9987;RSQ=0.2428;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234242212 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3150;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 234242280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7745;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234242305 . A AG 67 PASS INDEL;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6507;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234242373 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234242504 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0013;AVGPOST=0.9997;RSQ=0.8972;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234242619 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3080;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234242690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3084;AVGPOST=0.9989;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234242760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3076;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0004;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234242776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234242964 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0023;AVGPOST=0.9996;RSQ=0.9261;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234243059 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3343;AVGPOST=0.9988;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=731;AN=2184 GT:DS:GL:BD 0.33470696 0
1 234243253 . A AT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0019;AVGPOST=0.9973;RSQ=0.4736;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234243318 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234243343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234243459 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5021;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234243496 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3134;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0008;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 234243498 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6934;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234243553 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234243732 . G GTA 305 PASS INDEL;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0043;AVGPOST=0.9979;RSQ=0.8126;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234243794 . G GA 37 PASS INDEL;BAVGPOST=0.995;BRSQ=0.316;LDAF=0.0117;AVGPOST=0.9847;RSQ=0.4521;ERATE=0.0019;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234243901 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0061;AVGPOST=0.9976;RSQ=0.8765;ERATE=0.0003;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234243909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.716;LDAF=0.0068;AVGPOST=0.9957;RSQ=0.7601;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234243966 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.933;BRSQ=0.736;LDAF=0.1400;AVGPOST=0.9299;RSQ=0.7906;ERATE=0.0017;THETA=0.0010;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 234243976 . A AT 35 PASS INDEL;BAVGPOST=0.977;BRSQ=0.133;LDAF=0.0989;AVGPOST=0.8640;RSQ=0.4062;ERATE=0.0069;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234243991 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.854;BRSQ=0.215;LDAF=0.1635;AVGPOST=0.8542;RSQ=0.6018;ERATE=0.0054;THETA=0.0003;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 234244018 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.929;BRSQ=0.075;LDAF=0.0604;AVGPOST=0.9433;RSQ=0.6230;ERATE=0.0021;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234244026 . AT A 262 PASS INDEL;BAVGPOST=0.860;BRSQ=0.084;LDAF=0.1720;AVGPOST=0.7527;RSQ=0.2940;ERATE=0.0174;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 234244031 . T TTA 6569 PASS INDEL;BAVGPOST=0.791;BRSQ=0.620;LDAF=0.5973;AVGPOST=0.7948;RSQ=0.6735;ERATE=0.0056;THETA=0.0004;AC=1334;AN=2184 GT:DS:GL:BD 0.61080587 1
1 234244032 . T TAN 1635 PASS INDEL;BAVGPOST=0.709;BRSQ=0.504;LDAF=0.5826;AVGPOST=0.8352;RSQ=0.7439;ERATE=0.0018;THETA=0.0006;AC=1318;AN=2184 GT:DS:GL:BD 0.60347986 1
1 234244038 rs59253152 T TATA 1998 PASS INDEL;BAVGPOST=0.750;BRSQ=0.561;LDAF=0.5722;AVGPOST=0.7500;RSQ=0.5988;ERATE=0.0121;THETA=0.0007;AC=1315;AN=2184 GT:DS:GL:BD 0.60210621 1
1 234244086 . TA T 96 PASS INDEL;BAVGPOST=0.866;BRSQ=0.043;LDAF=0.1151;AVGPOST=0.8318;RSQ=0.3399;ERATE=0.0083;THETA=0.0006;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234244087 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.806;BRSQ=0.067;LDAF=0.1882;AVGPOST=0.7436;RSQ=0.3206;ERATE=0.0136;THETA=0.0029;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 234244109 rs71574899 T TAAAA 921 PASS INDEL;BAVGPOST=0.738;BRSQ=0.042;LDAF=0.2226;AVGPOST=0.6968;RSQ=0.2586;ERATE=0.0219;THETA=0.0004;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 234244179 . G GAT 399 PASS INDEL;BAVGPOST=0.851;BRSQ=0.029;LDAF=0.1420;AVGPOST=0.7973;RSQ=0.3413;ERATE=0.0075;THETA=0.0011;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 234244191 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.835;BRSQ=0.051;LDAF=0.1602;AVGPOST=0.7764;RSQ=0.3188;ERATE=0.0120;THETA=0.0011;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234244218 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.920;BRSQ=0.021;LDAF=0.1251;AVGPOST=0.8251;RSQ=0.3655;ERATE=0.0063;THETA=0.0005;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 234244224 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.895;BRSQ=0.053;LDAF=0.1178;AVGPOST=0.8176;RSQ=0.2963;ERATE=0.0076;THETA=0.0016;AC=92;AN=2184 GT:DS:GL:BD 0.04212454 0
1 234244242 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.907;BRSQ=0.066;LDAF=0.0996;AVGPOST=0.8939;RSQ=0.5413;ERATE=0.0047;THETA=0.0005;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 234244258 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.604;BRSQ=0.095;LDAF=0.2409;AVGPOST=0.6948;RSQ=0.3060;ERATE=0.0189;THETA=0.0003;AC=298;AN=2184 GT:DS:GL:BD 0.13644689 0
1 234244271 rs59972679 T TTA 585 PASS INDEL;BAVGPOST=0.745;BRSQ=0.033;LDAF=0.2192;AVGPOST=0.6924;RSQ=0.2660;ERATE=0.0167;THETA=0.0003;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234244284 . ATATATAT A 32 PASS INDEL;BAVGPOST=0.880;BRSQ=0.023;LDAF=0.0947;AVGPOST=0.8589;RSQ=0.3662;ERATE=0.0054;THETA=0.0013;AC=113;AN=2184 GT:DS:GL:BD 0.05173993 0
1 234244286 rs72048724 ATATATTATT A 163 PASS INDEL;BAVGPOST=0.845;BRSQ=0.025;LDAF=0.1375;AVGPOST=0.7971;RSQ=0.3128;ERATE=0.0085;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 234244339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.870;BRSQ=0.060;LDAF=0.1548;AVGPOST=0.7839;RSQ=0.3415;ERATE=0.0085;THETA=0.0015;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 234244373 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.914;BRSQ=0.063;LDAF=0.1160;AVGPOST=0.8132;RSQ=0.2550;ERATE=0.0128;THETA=0.0004;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 234244410 . TA T 1247 PASS INDEL;BAVGPOST=0.764;BRSQ=0.110;LDAF=0.1824;AVGPOST=0.8627;RSQ=0.6461;ERATE=0.0041;THETA=0.0021;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 234244472 . AAT A 236 PASS INDEL;BAVGPOST=0.752;BRSQ=0.114;LDAF=0.2325;AVGPOST=0.7640;RSQ=0.4724;ERATE=0.0102;THETA=0.0006;AC=371;AN=2184 GT:DS:GL:BD 0.16987179 0
1 234244473 rs56911999 AT A 796 PASS INDEL;BAVGPOST=0.783;BRSQ=0.246;LDAF=0.1980;AVGPOST=0.8435;RSQ=0.6039;ERATE=0.0065;THETA=0.0002;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 234244486 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.715;BRSQ=0.171;LDAF=0.3193;AVGPOST=0.6512;RSQ=0.3037;ERATE=0.0329;THETA=0.0007;AC=464;AN=2184 GT:DS:GL:BD 0.21245421 0
1 234244508 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.774;BRSQ=0.111;LDAF=0.2258;AVGPOST=0.6916;RSQ=0.2660;ERATE=0.0282;THETA=0.0007;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 234244508 rs71848027 AAT A 5441 PASS INDEL;BAVGPOST=0.950;BRSQ=0.016;LDAF=0.9380;AVGPOST=0.9197;RSQ=0.4758;ERATE=0.0023;THETA=0.0003;AC=2088;AN=2184 GT:DS:GL:BD 0.95604396 1
1 234244550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.211;LDAF=0.0215;AVGPOST=0.9689;RSQ=0.4213;ERATE=0.0020;THETA=0.0007;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234244579 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3077;AVGPOST=0.9958;RSQ=0.9943;ERATE=0.0005;THETA=0.0002;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234244643 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3078;AVGPOST=0.9981;RSQ=0.9975;ERATE=0.0005;THETA=0.0005;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234244669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4187;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234244750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234244763 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4872;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234244766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3076;AVGPOST=0.9985;RSQ=0.9981;ERATE=0.0004;THETA=0.0016;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234244838 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0027;AVGPOST=0.9990;RSQ=0.8372;ERATE=0.0004;THETA=0.0024;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234244886 . A AT 2447 PASS INDEL;BAVGPOST=0.994;BRSQ=0.973;LDAF=0.0857;AVGPOST=0.9884;RSQ=0.9466;ERATE=0.0011;THETA=0.0005;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 234244888 . T TG 12045 PASS INDEL;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.0804;AVGPOST=0.9968;RSQ=0.9843;ERATE=0.0005;THETA=0.0004;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 234244890 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3084;AVGPOST=0.9972;RSQ=0.9963;ERATE=0.0005;THETA=0.0008;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234244912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3076;AVGPOST=0.9981;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234244960 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0183;AVGPOST=0.9982;RSQ=0.9618;ERATE=0.0003;THETA=0.0010;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234245054 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3076;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234245291 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9181;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245382 rs35374005 TAGGG T 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9721;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234245419 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234245433 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234245443 . ACTGT A 135 PASS INDEL;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0028;AVGPOST=0.9973;RSQ=0.6229;ERATE=0.0007;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234245456 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7783;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234245573 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245611 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5383;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0006;THETA=0.0002;AC=1177;AN=2184 GT:DS:GL:BD 0.53891939 1
1 234245632 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8379;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234245646 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0039;AVGPOST=0.9982;RSQ=0.7984;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234245647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1250;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 234245705 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6398;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245706 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.982;LDAF=0.1605;AVGPOST=0.9957;RSQ=0.9878;ERATE=0.0004;THETA=0.0008;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 234245718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245771 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6244;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245783 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5874;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245801 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0143;AVGPOST=0.9987;RSQ=0.9596;ERATE=0.0003;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234245806 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234245859 rs71170461 T TGAG 110335 PASS INDEL;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.6896;AVGPOST=0.9931;RSQ=0.9883;ERATE=0.0006;THETA=0.0006;AC=1508;AN=2184 GT:DS:GL:BD 0.69047618 1
1 234246080 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6283;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234246121 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9690;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234246173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9187;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234246195 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234246304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0005;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234246436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0757;AVGPOST=0.9992;RSQ=0.9958;ERATE=0.0003;THETA=0.0005;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 234246477 rs58476451 AT A 45956 PASS INDEL;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3071;AVGPOST=0.9971;RSQ=0.9960;ERATE=0.0006;THETA=0.0007;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234246480 . TG T 7124 PASS INDEL;BAVGPOST=0.955;BRSQ=0.926;LDAF=0.3073;AVGPOST=0.9503;RSQ=0.9331;ERATE=0.0026;THETA=0.0006;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 234246497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7987;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234246703 . CTTAT C 45 PASS INDEL;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5771;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234246707 . T TA 156 PASS INDEL;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0040;AVGPOST=0.9984;RSQ=0.8395;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234246713 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0224;AVGPOST=0.9995;RSQ=0.9905;ERATE=0.0003;THETA=0.0012;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234246770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9601;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234246903 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.771;LDAF=0.0106;AVGPOST=0.9988;RSQ=0.9518;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234246981 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.726;LDAF=0.0042;AVGPOST=0.9989;RSQ=0.9098;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234247007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234247059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0214;AVGPOST=0.9952;RSQ=0.9229;ERATE=0.0005;THETA=0.0033;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234247067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0075;AVGPOST=0.9987;RSQ=0.9257;ERATE=0.0004;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234247068 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.2983;AVGPOST=0.9931;RSQ=0.9913;ERATE=0.0004;THETA=0.0006;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 234247138 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0058;AVGPOST=0.9972;RSQ=0.7907;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234247147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.649;LDAF=0.0096;AVGPOST=0.9910;RSQ=0.6357;ERATE=0.0008;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234247173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.9056;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234247228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.672;LDAF=0.0026;AVGPOST=0.9973;RSQ=0.5477;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234247290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7217;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234247294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.970;LDAF=0.2990;AVGPOST=0.9874;RSQ=0.9841;ERATE=0.0007;THETA=0.0005;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 234247326 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.4371;AVGPOST=0.9954;RSQ=0.9938;ERATE=0.0008;THETA=0.0004;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 234247340 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3068;AVGPOST=0.9972;RSQ=0.9968;ERATE=0.0004;THETA=0.0003;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234247503 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234247567 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9779;ERATE=0.0003;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234247746 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3108;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 234247898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.728;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.6267;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234247932 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9512;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234247953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.758;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.7746;ERATE=0.0006;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234247964 . G GTGCATGCC 1485 PASS INDEL;BAVGPOST=0.997;BRSQ=0.704;LDAF=0.0108;AVGPOST=0.9930;RSQ=0.7737;ERATE=0.0004;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234248019 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1277;AVGPOST=0.9988;RSQ=0.9959;ERATE=0.0004;THETA=0.0005;AC=278;AN=2184 GT:DS:GL:BD 0.12728938 0
1 234248108 . C CA 28 PASS INDEL;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6529;ERATE=0.0005;THETA=0.0053;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234248130 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8577;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234248164 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.885;LDAF=0.0167;AVGPOST=0.9979;RSQ=0.9454;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234248215 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3072;AVGPOST=0.9992;RSQ=0.9989;ERATE=0.0004;THETA=0.0006;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234248450 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.880;LDAF=0.1247;AVGPOST=0.9805;RSQ=0.9338;ERATE=0.0013;THETA=0.0005;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234248468 . A ATT 1185 PASS INDEL;BAVGPOST=0.598;BRSQ=0.087;LDAF=0.6723;AVGPOST=0.6527;RSQ=0.3169;ERATE=0.0300;THETA=0.0005;AC=1598;AN=2184 GT:DS:GL:BD 0.73168498 1
1 234248533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0048;AVGPOST=0.9974;RSQ=0.7762;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234248601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.892;LDAF=0.0107;AVGPOST=0.9955;RSQ=0.8200;ERATE=0.0009;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234248643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0059;AVGPOST=0.9977;RSQ=0.8392;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234248674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6474;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234248698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.697;LDAF=0.0356;AVGPOST=0.9892;RSQ=0.8848;ERATE=0.0004;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234248734 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4652;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234248755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9649;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234248865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7194;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234248941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.6097;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234248987 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7966;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234249181 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1194;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 234249224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234249318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6102;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234249320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3070;AVGPOST=0.9992;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234249332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4607;AVGPOST=0.9979;RSQ=0.9972;ERATE=0.0004;THETA=0.0004;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 234249397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.632;LDAF=0.0210;AVGPOST=0.9757;RSQ=0.5637;ERATE=0.0042;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234249482 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1277;AVGPOST=0.9986;RSQ=0.9953;ERATE=0.0003;THETA=0.0002;AC=277;AN=2184 GT:DS:GL:BD 0.12683150 0
1 234249495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7173;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234249534 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4749;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234249601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0117;AVGPOST=0.9931;RSQ=0.7587;ERATE=0.0020;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234249602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0750;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0003;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 234249605 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8736;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234249790 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3071;AVGPOST=0.9996;RSQ=0.9995;ERATE=0.0003;THETA=0.0005;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234250079 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3071;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0004;THETA=0.0032;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234250088 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4672;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234250109 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0072;AVGPOST=0.9993;RSQ=0.9657;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234250165 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.747;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9077;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234250193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234250218 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1245;AVGPOST=0.9988;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 234250223 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3071;AVGPOST=0.9971;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234250281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4625;AVGPOST=0.9976;RSQ=0.9966;ERATE=0.0004;THETA=0.0004;AC=1011;AN=2184 GT:DS:GL:BD 0.46291208 0
1 234250304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4638;AVGPOST=0.9959;RSQ=0.9947;ERATE=0.0006;THETA=0.0004;AC=1012;AN=2184 GT:DS:GL:BD 0.46336997 0
1 234250378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5540;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234250494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0213;AVGPOST=0.9995;RSQ=0.9899;ERATE=0.0004;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234251160 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.704;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.8175;ERATE=0.0006;THETA=0.0043;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234251194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8664;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234251302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6698;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234251390 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234251568 . CTT C 454 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234251570 . TATCTC T 16463 PASS INDEL;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0737;AVGPOST=0.9979;RSQ=0.9905;ERATE=0.0004;THETA=0.0005;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234251639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6592;AVGPOST=0.9976;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=1440;AN=2184 GT:DS:GL:BD 0.65934068 1
1 234251661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8686;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234251720 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.895;LDAF=0.0347;AVGPOST=0.9968;RSQ=0.9656;ERATE=0.0005;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234251744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234251799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7566;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234251910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.808;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.9064;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234251914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9133;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234251966 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4579;AVGPOST=0.9957;RSQ=0.9947;ERATE=0.0004;THETA=0.0002;AC=1003;AN=2184 GT:DS:GL:BD 0.45924908 0
1 234252029 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234252097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9558;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234252101 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3067;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0004;THETA=0.0003;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234252113 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234252227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0756;AVGPOST=0.9974;RSQ=0.9864;ERATE=0.0005;THETA=0.0005;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 234252240 rs35352230 AT A 7399 PASS INDEL;BAVGPOST=0.994;BRSQ=0.977;LDAF=0.1239;AVGPOST=0.9930;RSQ=0.9761;ERATE=0.0007;THETA=0.0006;AC=267;AN=2184 GT:DS:GL:BD 0.12225275 0
1 234252251 . T TTTTA 410 PASS INDEL;BAVGPOST=0.996;BRSQ=0.678;LDAF=0.0051;AVGPOST=0.9974;RSQ=0.7843;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234252267 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.894;BRSQ=0.812;LDAF=0.2628;AVGPOST=0.8680;RSQ=0.8102;ERATE=0.0178;THETA=0.0004;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 234252267 . A AT 133 PASS INDEL;BAVGPOST=0.959;BRSQ=0.317;LDAF=0.0320;AVGPOST=0.9554;RSQ=0.4554;ERATE=0.0011;THETA=0.0001;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234252284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.515;LDAF=0.0034;AVGPOST=0.9960;RSQ=0.4735;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234252314 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.955;LDAF=0.2971;AVGPOST=0.9828;RSQ=0.9780;ERATE=0.0007;THETA=0.0004;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 234252318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.918;BRSQ=0.583;LDAF=0.0964;AVGPOST=0.9457;RSQ=0.8061;ERATE=0.0005;THETA=0.0008;AC=190;AN=2184 GT:DS:GL:BD 0.08699634 0
1 234252344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.864;LDAF=0.0077;AVGPOST=0.9951;RSQ=0.7222;ERATE=0.0006;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234252526 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9033;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234252665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5883;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234252718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3054;AVGPOST=0.9983;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 234252826 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3068;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234253034 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6883;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234253128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.5278;AVGPOST=0.9977;RSQ=0.9965;ERATE=0.0006;THETA=0.0005;AC=1153;AN=2184 GT:DS:GL:BD 0.52793038 1
1 234253199 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0089;AVGPOST=0.9894;RSQ=0.5662;ERATE=0.0006;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234253212 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234253218 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8551;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234253220 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3074;AVGPOST=0.9983;RSQ=0.9977;ERATE=0.0005;THETA=0.0001;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234253248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.968;LDAF=0.2968;AVGPOST=0.9867;RSQ=0.9822;ERATE=0.0003;THETA=0.0009;AC=656;AN=2184 GT:DS:GL:BD 0.30036631 0
1 234253269 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.968;LDAF=0.4406;AVGPOST=0.9808;RSQ=0.9739;ERATE=0.0013;THETA=0.0004;AC=968;AN=2184 GT:DS:GL:BD 0.44322345 0
1 234253292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.570;LDAF=0.0079;AVGPOST=0.9910;RSQ=0.5432;ERATE=0.0020;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234253406 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0215;AVGPOST=0.9992;RSQ=0.9832;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234253460 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.476;LDAF=0.0176;AVGPOST=0.9920;RSQ=0.8152;ERATE=0.0006;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234253491 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0026;AVGPOST=0.9956;RSQ=0.3272;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234253556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.837;LDAF=0.1161;AVGPOST=0.9767;RSQ=0.9175;ERATE=0.0015;THETA=0.0003;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 234253660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.842;BRSQ=0.597;LDAF=0.2020;AVGPOST=0.8487;RSQ=0.6908;ERATE=0.0189;THETA=0.0002;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 234253723 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.933;LDAF=0.1206;AVGPOST=0.9874;RSQ=0.9594;ERATE=0.0011;THETA=0.0002;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234253923 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9576;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234253984 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.1455;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 234253987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.3722;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=811;AN=2184 GT:DS:GL:BD 0.37133700 0
1 234254061 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234254088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3066;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0009;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234254182 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0056;AVGPOST=0.9976;RSQ=0.8446;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234254225 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234254306 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3059;AVGPOST=0.9985;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 234254343 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7949;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234254400 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1309;AVGPOST=0.9989;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 234254435 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3069;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0004;THETA=0.0006;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234254659 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1318;AVGPOST=0.9981;RSQ=0.9932;ERATE=0.0004;THETA=0.0007;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 234254686 . AC A 50 PASS INDEL;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234254726 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234254842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234254852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9294;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234255003 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3065;AVGPOST=0.9979;RSQ=0.9973;ERATE=0.0004;THETA=0.0006;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234255023 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1455;AVGPOST=0.9993;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 234255178 . TA T 328 PASS INDEL;BAVGPOST=0.999;BRSQ=0.758;LDAF=0.0043;AVGPOST=0.9957;RSQ=0.5817;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234255219 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.986;LDAF=0.1466;AVGPOST=0.9967;RSQ=0.9889;ERATE=0.0007;THETA=0.0002;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 234255292 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234255370 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1162;AVGPOST=0.9991;RSQ=0.9970;ERATE=0.0003;THETA=0.0005;AC=254;AN=2184 GT:DS:GL:BD 0.11630037 0
1 234255445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0048;AVGPOST=0.9975;RSQ=0.7804;ERATE=0.0005;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234255457 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8178;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234255479 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3069;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0004;THETA=0.0007;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234255558 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234255603 . T TCG 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234255604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0027;AVGPOST=0.9998;RSQ=0.9690;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234255826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0741;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234255981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0243;AVGPOST=0.9980;RSQ=0.9724;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234256003 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234256057 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.1195;AVGPOST=0.9964;RSQ=0.9884;ERATE=0.0006;THETA=0.0017;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234256094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234256173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.7167;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234256264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8366;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234256604 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3013;AVGPOST=0.9997;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 234256649 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3013;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0004;THETA=0.0003;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 234256707 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0270;AVGPOST=0.9999;RSQ=0.9977;ERATE=0.0003;THETA=0.0020;AC=59;AN=2184 GT:DS:GL:BD 0.02701465 0
1 234256967 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0063;AVGPOST=0.9977;RSQ=0.8264;ERATE=0.0006;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234256984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.941;LDAF=0.4314;AVGPOST=0.9447;RSQ=0.9291;ERATE=0.0047;THETA=0.0003;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 234257127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.948;LDAF=0.1382;AVGPOST=0.9653;RSQ=0.8937;ERATE=0.0034;THETA=0.0006;AC=285;AN=2184 GT:DS:GL:BD 0.13049451 0
1 234257136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.913;LDAF=0.0271;AVGPOST=0.9929;RSQ=0.9015;ERATE=0.0008;THETA=0.0001;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234257184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2931;AVGPOST=0.9939;RSQ=0.9913;ERATE=0.0009;THETA=0.0007;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 234257299 . CT C 307 PASS INDEL;BAVGPOST=0.996;BRSQ=0.777;LDAF=0.0159;AVGPOST=0.9830;RSQ=0.5973;ERATE=0.0010;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234257322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0093;AVGPOST=0.9958;RSQ=0.8316;ERATE=0.0006;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234257336 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.792;LDAF=0.0183;AVGPOST=0.9957;RSQ=0.9086;ERATE=0.0005;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234257450 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0057;AVGPOST=0.9995;RSQ=0.9632;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234257480 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.816;LDAF=0.0077;AVGPOST=0.9930;RSQ=0.6565;ERATE=0.0006;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234257497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.979;LDAF=0.0571;AVGPOST=0.9979;RSQ=0.9872;ERATE=0.0003;THETA=0.0002;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234257564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0014;AVGPOST=0.9979;RSQ=0.4695;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234257616 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234257680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.925;LDAF=0.1115;AVGPOST=0.9941;RSQ=0.9772;ERATE=0.0006;THETA=0.0004;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234257704 rs67882784 TATCA T 7608 PASS INDEL;BAVGPOST=0.820;BRSQ=0.643;LDAF=0.2469;AVGPOST=0.8441;RSQ=0.7391;ERATE=0.0189;THETA=0.0003;AC=563;AN=2184 GT:DS:GL:BD 0.25778389 0
1 234257748 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7419;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234257838 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9642;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234258035 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1146;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 234258077 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4577;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234258171 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9401;ERATE=0.0003;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234258208 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2276;AVGPOST=0.9973;RSQ=0.9943;ERATE=0.0004;THETA=0.0005;AC=498;AN=2184 GT:DS:GL:BD 0.22802198 0
1 234258237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1151;AVGPOST=0.9993;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 234258275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.949;LDAF=0.4197;AVGPOST=0.9709;RSQ=0.9607;ERATE=0.0046;THETA=0.0003;AC=934;AN=2184 GT:DS:GL:BD 0.42765567 0
1 234258352 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7233;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234258380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4431;AVGPOST=0.9963;RSQ=0.9947;ERATE=0.0006;THETA=0.0002;AC=969;AN=2184 GT:DS:GL:BD 0.44368133 0
1 234258391 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8852;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234258531 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8141;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234258535 . G GC 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5077;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234258569 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.768;LDAF=0.0209;AVGPOST=0.9900;RSQ=0.8009;ERATE=0.0011;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234258592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0054;AVGPOST=0.9990;RSQ=0.9243;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234258790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.6389;AVGPOST=0.9879;RSQ=0.9819;ERATE=0.0022;THETA=0.0006;AC=1400;AN=2184 GT:DS:GL:BD 0.64102566 1
1 234258793 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6637;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234258889 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9357;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234258947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.983;LDAF=0.1073;AVGPOST=0.9980;RSQ=0.9929;ERATE=0.0003;THETA=0.0004;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234259135 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.2919;AVGPOST=0.9989;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=639;AN=2184 GT:DS:GL:BD 0.29258242 0
1 234259150 rs113319643 A ATGTTT 1100 PASS INDEL;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0056;AVGPOST=0.9996;RSQ=0.9650;ERATE=0.0004;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234259195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259333 . T TTTTG 7089 PASS INDEL;BAVGPOST=0.791;BRSQ=0.527;LDAF=0.2805;AVGPOST=0.7780;RSQ=0.5416;ERATE=0.0579;THETA=0.0005;AC=503;AN=2184 GT:DS:GL:BD 0.23031135 0
1 234259580 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259673 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259790 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4382;AVGPOST=0.9985;RSQ=0.9977;ERATE=0.0007;THETA=0.0002;AC=958;AN=2184 GT:DS:GL:BD 0.43864468 0
1 234259825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1262;AVGPOST=0.9991;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=274;AN=2184 GT:DS:GL:BD 0.12545788 0
1 234259912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6066;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259972 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9682;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234259978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5729;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234259979 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234260041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234260076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234260086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.6464;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=1412;AN=2184 GT:DS:GL:BD 0.64652014 1
1 234260127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234260217 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0752;AVGPOST=0.9989;RSQ=0.9936;ERATE=0.0006;THETA=0.0003;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 234260458 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1471;AVGPOST=0.9985;RSQ=0.9950;ERATE=0.0005;THETA=0.0002;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 234260474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2912;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0003;THETA=0.0033;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 234260491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8603;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234260509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.6033;ERATE=0.0006;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234260573 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2915;AVGPOST=0.9991;RSQ=0.9990;ERATE=0.0003;THETA=0.0006;AC=637;AN=2184 GT:DS:GL:BD 0.29166666 0
1 234260598 rs35219693 CAA C 22836 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1149;AVGPOST=0.9984;RSQ=0.9947;ERATE=0.0004;THETA=0.0003;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 234260600 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7345;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234260666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0039;AVGPOST=0.9989;RSQ=0.8954;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234260843 . GTGGC G 92 PASS INDEL;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4537;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234260857 rs112194990 TCA T 5484 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0313;AVGPOST=0.9986;RSQ=0.9832;ERATE=0.0005;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234260918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0022;AVGPOST=0.9995;RSQ=0.9047;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234260921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234260990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9095;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234260991 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6129;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234261031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9768;ERATE=0.0003;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234261073 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7137;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234261079 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8854;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234261136 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6903;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234261194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0742;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234261277 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7551;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234261353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234261466 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1923;AVGPOST=0.9988;RSQ=0.9968;ERATE=0.0003;THETA=0.0015;AC=419;AN=2184 GT:DS:GL:BD 0.19184981 0
1 234261751 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3939;AVGPOST=0.9981;RSQ=0.9974;ERATE=0.0005;THETA=0.0003;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 234261839 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1138;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0004;THETA=0.0020;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234262068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1138;AVGPOST=0.9989;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234262120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1527;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=333;AN=2184 GT:DS:GL:BD 0.15247253 0
1 234262176 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0340;AVGPOST=0.9990;RSQ=0.9894;ERATE=0.0004;THETA=0.0006;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 234262183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5276;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234262283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6560;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234262518 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0018;AVGPOST=0.9980;RSQ=0.6136;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234262546 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4160;ERATE=0.0009;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234262568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6572;ERATE=0.0005;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234262579 . C CT 123 PASS INDEL;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4347;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234262599 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234262610 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1133;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=247;AN=2184 GT:DS:GL:BD 0.11309524 0
1 234262989 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6728;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234263213 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1106;AVGPOST=0.9975;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 234263283 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.730;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6018;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234263334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2922;AVGPOST=0.9969;RSQ=0.9959;ERATE=0.0005;THETA=0.0009;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 234263478 . CT C 9277 PASS INDEL;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0734;AVGPOST=0.9969;RSQ=0.9825;ERATE=0.0004;THETA=0.0018;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234263481 . TG T 406 PASS INDEL;BAVGPOST=0.966;BRSQ=0.708;LDAF=0.0981;AVGPOST=0.9242;RSQ=0.6604;ERATE=0.0051;THETA=0.0010;AC=165;AN=2184 GT:DS:GL:BD 0.07554945 0
1 234263490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.5797;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234263501 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234263502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8845;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234263519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1158;AVGPOST=0.9986;RSQ=0.9943;ERATE=0.0004;THETA=0.0006;AC=252;AN=2184 GT:DS:GL:BD 0.11538462 0
1 234263540 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4653;ERATE=0.0003;THETA=0.0010;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234263558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7015;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234263562 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4652;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234263730 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234263851 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0061;AVGPOST=0.9998;RSQ=0.9820;ERATE=0.0003;THETA=0.0009;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234263875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3134;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 234263897 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3141;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0003;THETA=0.0074;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 234263940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234263993 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234264007 . TG T 8187 PASS INDEL;BAVGPOST=0.945;BRSQ=0.894;LDAF=0.2657;AVGPOST=0.9355;RSQ=0.8988;ERATE=0.0066;THETA=0.0013;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 234264008 rs11303008 GT G 48513 PASS INDEL;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.3184;AVGPOST=0.9924;RSQ=0.9892;ERATE=0.0008;THETA=0.0003;AC=694;AN=2184 GT:DS:GL:BD 0.31776556 0
1 234264011 . TG T 7683 PASS INDEL;BAVGPOST=0.945;BRSQ=0.895;LDAF=0.2823;AVGPOST=0.9622;RSQ=0.9448;ERATE=0.0004;THETA=0.0022;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 234264031 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0099;AVGPOST=0.9994;RSQ=0.9807;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234264068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0076;AVGPOST=0.9992;RSQ=0.9603;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234264078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3222;AVGPOST=0.9981;RSQ=0.9974;ERATE=0.0003;THETA=0.0005;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 234264091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0107;AVGPOST=0.9984;RSQ=0.9478;ERATE=0.0003;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234264120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2677;AVGPOST=0.9918;RSQ=0.9884;ERATE=0.0005;THETA=0.0011;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 234264186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8771;ERATE=0.0003;THETA=0.0038;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234264194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0081;AVGPOST=0.9984;RSQ=0.9357;ERATE=0.0003;THETA=0.0029;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234264234 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0018;AVGPOST=0.9986;RSQ=0.7257;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234264280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6164;ERATE=0.0006;THETA=0.0038;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234264309 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234264371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8999;ERATE=0.0003;THETA=0.0069;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234264398 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234264472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0717;AVGPOST=0.9988;RSQ=0.9942;ERATE=0.0003;THETA=0.0006;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 234264531 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0218;AVGPOST=0.9992;RSQ=0.9853;ERATE=0.0003;THETA=0.0008;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234264537 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2724;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 234264555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2723;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0019;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234264584 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2733;AVGPOST=0.9976;RSQ=0.9955;ERATE=0.0006;THETA=0.0004;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 234264613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0499;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0004;THETA=0.0061;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234264787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2517;AVGPOST=0.9982;RSQ=0.9970;ERATE=0.0004;THETA=0.0003;AC=546;AN=2184 GT:DS:GL:BD 0.25000000 0
1 234264826 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0032;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234264837 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8599;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234264873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7559;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234265063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3878;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 234265137 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2733;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0029;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 234265148 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.9077;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234265246 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234265266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9156;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234265269 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2725;AVGPOST=0.9979;RSQ=0.9967;ERATE=0.0005;THETA=0.0003;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234265396 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8811;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234265427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0608;AVGPOST=0.9983;RSQ=0.9904;ERATE=0.0004;THETA=0.0005;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 234265547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0444;AVGPOST=0.9998;RSQ=0.9976;ERATE=0.0003;THETA=0.0008;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234265557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5817;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234265558 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5980;ERATE=0.0004;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234265651 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0448;AVGPOST=0.9988;RSQ=0.9913;ERATE=0.0003;THETA=0.0026;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234265703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3253;AVGPOST=0.9960;RSQ=0.9939;ERATE=0.0007;THETA=0.0016;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 234265806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0239;AVGPOST=0.9987;RSQ=0.9799;ERATE=0.0003;THETA=0.0004;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234265839 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234265898 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5417;ERATE=0.0004;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234266037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0225;AVGPOST=0.9998;RSQ=0.9955;ERATE=0.0003;THETA=0.0014;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234266065 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2726;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0005;THETA=0.0006;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 234266168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.960;LDAF=0.2540;AVGPOST=0.9773;RSQ=0.9620;ERATE=0.0023;THETA=0.0007;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 234266214 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.842;LDAF=0.0481;AVGPOST=0.9867;RSQ=0.8972;ERATE=0.0013;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234266342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0186;AVGPOST=0.9963;RSQ=0.9294;ERATE=0.0003;THETA=0.0058;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234266343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.919;LDAF=0.2844;AVGPOST=0.9602;RSQ=0.9395;ERATE=0.0008;THETA=0.0003;AC=627;AN=2184 GT:DS:GL:BD 0.28708792 0
1 234266351 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.930;LDAF=0.2100;AVGPOST=0.9690;RSQ=0.9442;ERATE=0.0008;THETA=0.0004;AC=465;AN=2184 GT:DS:GL:BD 0.21291208 0
1 234266361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.953;BRSQ=0.905;LDAF=0.2663;AVGPOST=0.9576;RSQ=0.9343;ERATE=0.0004;THETA=0.0004;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234266362 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.903;LDAF=0.2660;AVGPOST=0.9593;RSQ=0.9367;ERATE=0.0008;THETA=0.0014;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234266365 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.841;LDAF=0.0479;AVGPOST=0.9883;RSQ=0.9096;ERATE=0.0006;THETA=0.0021;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 234266368 . C CAG 592 PASS INDEL;BAVGPOST=0.998;BRSQ=0.929;LDAF=0.0173;AVGPOST=0.9941;RSQ=0.8735;ERATE=0.0006;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234266401 . AG A 15188 PASS INDEL;BAVGPOST=0.982;BRSQ=0.970;LDAF=0.3243;AVGPOST=0.9833;RSQ=0.9761;ERATE=0.0016;THETA=0.0025;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 234266483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0420;AVGPOST=0.9988;RSQ=0.9865;ERATE=0.0004;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 234266626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0459;AVGPOST=0.9987;RSQ=0.9888;ERATE=0.0004;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 234266644 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5615;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234266656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2691;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 234266662 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2689;AVGPOST=0.9962;RSQ=0.9941;ERATE=0.0003;THETA=0.0006;AC=585;AN=2184 GT:DS:GL:BD 0.26785713 0
1 234266673 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2683;AVGPOST=0.9955;RSQ=0.9926;ERATE=0.0004;THETA=0.0004;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 234266674 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0028;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234266682 . T TA 8256 PASS INDEL;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.2640;AVGPOST=0.9852;RSQ=0.9759;ERATE=0.0005;THETA=0.0037;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 234266690 rs35694091 A AG 5893 PASS INDEL;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.2677;AVGPOST=0.9881;RSQ=0.9807;ERATE=0.0006;THETA=0.0004;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 234266737 rs35411230 C CT 38310 PASS INDEL;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.2728;AVGPOST=0.9947;RSQ=0.9912;ERATE=0.0008;THETA=0.0016;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 234266784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.2729;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0003;THETA=0.0002;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234266786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.2730;AVGPOST=0.9977;RSQ=0.9961;ERATE=0.0003;THETA=0.0043;AC=593;AN=2184 GT:DS:GL:BD 0.27152014 0
1 234266875 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234266915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2737;AVGPOST=0.9968;RSQ=0.9945;ERATE=0.0007;THETA=0.0009;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 234266928 . A AT 9109 PASS INDEL;BAVGPOST=0.990;BRSQ=0.981;LDAF=0.2733;AVGPOST=0.9951;RSQ=0.9918;ERATE=0.0005;THETA=0.0002;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234266931 rs35930192 T TC 40959 PASS INDEL;BAVGPOST=0.991;BRSQ=0.982;LDAF=0.2728;AVGPOST=0.9971;RSQ=0.9950;ERATE=0.0006;THETA=0.0006;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 234266936 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.884;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8519;ERATE=0.0004;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234267131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.2783;AVGPOST=0.9941;RSQ=0.9926;ERATE=0.0005;THETA=0.0011;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 234267263 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0023;AVGPOST=0.9986;RSQ=0.7358;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234267264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0448;AVGPOST=0.9993;RSQ=0.9939;ERATE=0.0003;THETA=0.0006;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 234267329 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0547;AVGPOST=0.9990;RSQ=0.9941;ERATE=0.0003;THETA=0.0007;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234267407 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9996;RSQ=0.9929;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234267536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2736;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0006;THETA=0.0004;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234267593 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234267604 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2732;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0003;THETA=0.0001;AC=595;AN=2184 GT:DS:GL:BD 0.27243590 0
1 234267647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234267657 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2729;AVGPOST=0.9986;RSQ=0.9978;ERATE=0.0003;THETA=0.0026;AC=594;AN=2184 GT:DS:GL:BD 0.27197802 0
1 234267696 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0393;AVGPOST=0.9993;RSQ=0.9933;ERATE=0.0003;THETA=0.0023;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 234267766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6520;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234267810 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2729;AVGPOST=0.9977;RSQ=0.9969;ERATE=0.0004;THETA=0.0007;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 234267824 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2740;AVGPOST=0.9991;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234267832 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2736;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0003;THETA=0.0006;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234267894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234267903 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2740;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0003;THETA=0.0020;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234268080 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0559;AVGPOST=0.9988;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 234268087 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0017;AVGPOST=0.9977;RSQ=0.5715;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234268102 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234268106 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6552;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234268189 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0065;AVGPOST=0.9985;RSQ=0.9112;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234268242 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234268420 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2745;AVGPOST=0.9982;RSQ=0.9965;ERATE=0.0006;THETA=0.0006;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234268432 . AG A 471 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9665;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234268437 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2766;AVGPOST=0.9972;RSQ=0.9947;ERATE=0.0007;THETA=0.0003;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 234268453 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7351;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234268556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2744;AVGPOST=0.9987;RSQ=0.9975;ERATE=0.0004;THETA=0.0005;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234268590 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234268610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7772;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234268655 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234268670 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234268739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234268839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0546;AVGPOST=0.9984;RSQ=0.9890;ERATE=0.0003;THETA=0.0007;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234268889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234268994 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2745;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0006;THETA=0.0004;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234269035 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0226;AVGPOST=0.9995;RSQ=0.9912;ERATE=0.0003;THETA=0.0004;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234269075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0559;AVGPOST=0.9988;RSQ=0.9931;ERATE=0.0003;THETA=0.0006;AC=121;AN=2184 GT:DS:GL:BD 0.05540293 0
1 234269155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0085;AVGPOST=0.9989;RSQ=0.9530;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234269169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2744;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0005;THETA=0.0004;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234269170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0454;AVGPOST=0.9995;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234269226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0036;AVGPOST=0.9989;RSQ=0.8714;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234269243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6402;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234269305 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2492;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0011;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 234269425 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0454;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234269476 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234269529 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0107;AVGPOST=0.9989;RSQ=0.9652;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234269541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234269652 . CAG C 866 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9669;ERATE=0.0003;THETA=0.0034;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234269792 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3214;AVGPOST=0.9972;RSQ=0.9955;ERATE=0.0009;THETA=0.0004;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 234269836 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.5184;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234269912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0034;AVGPOST=0.9991;RSQ=0.8837;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234269913 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9052;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234269957 . C CT 101 PASS INDEL;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0031;AVGPOST=0.9979;RSQ=0.7306;ERATE=0.0004;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234269958 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3301;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0006;THETA=0.0003;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 234270030 . GTAAT G 1812 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0270;AVGPOST=0.9929;RSQ=0.8992;ERATE=0.0008;THETA=0.0006;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234270076 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.452;LDAF=0.0067;AVGPOST=0.9910;RSQ=0.4308;ERATE=0.0011;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234270121 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2530;AVGPOST=0.9803;RSQ=0.9667;ERATE=0.0023;THETA=0.0003;AC=542;AN=2184 GT:DS:GL:BD 0.24816850 0
1 234270333 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0042;AVGPOST=0.9982;RSQ=0.8332;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234270353 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2496;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=543;AN=2184 GT:DS:GL:BD 0.24862637 0
1 234270417 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2725;AVGPOST=0.9984;RSQ=0.9975;ERATE=0.0005;THETA=0.0007;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234270438 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3329;AVGPOST=0.9985;RSQ=0.9980;ERATE=0.0004;THETA=0.0003;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 234270483 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.636;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6490;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234270529 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.848;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9265;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234270624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3258;AVGPOST=0.9909;RSQ=0.9879;ERATE=0.0004;THETA=0.0003;AC=717;AN=2184 GT:DS:GL:BD 0.32829669 0
1 234270625 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0026;AVGPOST=0.9995;RSQ=0.8995;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234270629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.742;LDAF=0.0107;AVGPOST=0.9924;RSQ=0.7111;ERATE=0.0011;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234270762 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2723;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234270917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3331;AVGPOST=0.9989;RSQ=0.9986;ERATE=0.0003;THETA=0.0014;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 234270980 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2752;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0045;AC=602;AN=2184 GT:DS:GL:BD 0.27564102 0
1 234271018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234271116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9333;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234271214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234271217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3639;AVGPOST=0.9986;RSQ=0.9981;ERATE=0.0003;THETA=0.0008;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 234271350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7330;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3637;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0004;THETA=0.0008;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 234271484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3617;AVGPOST=0.9987;RSQ=0.9981;ERATE=0.0004;THETA=0.0021;AC=791;AN=2184 GT:DS:GL:BD 0.36217949 0
1 234271615 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5775;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271687 . C CTT 1538 PASS INDEL;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0096;AVGPOST=0.9972;RSQ=0.8994;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234271726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9721;ERATE=0.0003;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234271797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0060;AVGPOST=0.9999;RSQ=0.9889;ERATE=0.0003;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234271833 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0332;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0074;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234271861 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7170;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234271868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2488;AVGPOST=0.9966;RSQ=0.9943;ERATE=0.0004;THETA=0.0048;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 234271910 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5706;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234271939 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.6540;AVGPOST=0.9882;RSQ=0.9809;ERATE=0.0011;THETA=0.0006;AC=1430;AN=2184 GT:DS:GL:BD 0.65476191 1
1 234272006 rs71854591 G GTCTTTCTTTCTCT 81153 PASS INDEL;BAVGPOST=0.963;BRSQ=0.935;LDAF=0.3111;AVGPOST=0.9764;RSQ=0.9666;ERATE=0.0008;THETA=0.0005;AC=689;AN=2184 GT:DS:GL:BD 0.31547618 0
1 234272050 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.974;LDAF=0.3214;AVGPOST=0.9835;RSQ=0.9784;ERATE=0.0025;THETA=0.0012;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 234272052 . TTC T 69 PASS INDEL;BAVGPOST=0.995;BRSQ=0.891;LDAF=0.0204;AVGPOST=0.9945;RSQ=0.9116;ERATE=0.0003;THETA=0.0040;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234272056 rs113192387 CTCTT C 4936 PASS INDEL;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0251;AVGPOST=0.9966;RSQ=0.9605;ERATE=0.0005;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234272097 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0448;AVGPOST=0.9994;RSQ=0.9943;ERATE=0.0004;THETA=0.0018;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 234272120 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0056;AVGPOST=0.9995;RSQ=0.9618;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234272438 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234272480 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2830;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234272687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234272690 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234272787 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0050;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234272887 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4449;AVGPOST=0.9975;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=974;AN=2184 GT:DS:GL:BD 0.44597068 0
1 234273182 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234273318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2719;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=592;AN=2184 GT:DS:GL:BD 0.27106228 0
1 234273399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6583;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234273400 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9995;RSQ=0.9671;ERATE=0.0003;THETA=0.0053;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234273484 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4443;AVGPOST=0.9993;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=972;AN=2184 GT:DS:GL:BD 0.44505495 0
1 234273509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9104;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234273515 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.633;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234273516 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.7497;AVGPOST=0.9972;RSQ=0.9945;ERATE=0.0006;THETA=0.0006;AC=1638;AN=2184 GT:DS:GL:BD 0.75000000 1
1 234273572 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0219;AVGPOST=0.9994;RSQ=0.9859;ERATE=0.0003;THETA=0.0003;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234273602 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8410;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234273669 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.759;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8673;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234273736 . GA G 4703 PASS INDEL;BAVGPOST=0.993;BRSQ=0.898;LDAF=0.0303;AVGPOST=0.9936;RSQ=0.9150;ERATE=0.0005;THETA=0.0005;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234273793 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234273867 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6067;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234273919 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234273943 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.7327;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234274274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4498;AVGPOST=0.9996;RSQ=0.9994;ERATE=0.0003;THETA=0.0002;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 234274290 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0061;AVGPOST=0.9991;RSQ=0.9396;ERATE=0.0005;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234274300 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9555;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234274353 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8785;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234274378 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.7615;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=1664;AN=2184 GT:DS:GL:BD 0.76190478 1
1 234274421 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8442;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234274476 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234274526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8703;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234274554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0312;AVGPOST=0.9998;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 234274566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9145;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234274592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4134;AVGPOST=0.9985;RSQ=0.9978;ERATE=0.0005;THETA=0.0009;AC=904;AN=2184 GT:DS:GL:BD 0.41391942 0
1 234274658 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.7527;AVGPOST=0.9994;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=1644;AN=2184 GT:DS:GL:BD 0.75274724 1
1 234274725 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7109;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234274988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1360;AVGPOST=0.9977;RSQ=0.9931;ERATE=0.0004;THETA=0.0016;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 234275021 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8821;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234275117 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0444;AVGPOST=0.9989;RSQ=0.9919;ERATE=0.0003;THETA=0.0006;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234275194 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5966;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234275214 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0052;AVGPOST=0.9996;RSQ=0.9627;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234275222 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.3005;AVGPOST=0.9981;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234275248 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234275304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9734;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234275307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0153;AVGPOST=0.9985;RSQ=0.9675;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234275355 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4930;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234275384 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.934;LDAF=0.0206;AVGPOST=0.9970;RSQ=0.9509;ERATE=0.0003;THETA=0.0001;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234275459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4728;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234275511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0263;AVGPOST=0.9932;RSQ=0.9094;ERATE=0.0005;THETA=0.0007;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234275609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.869;LDAF=0.0489;AVGPOST=0.9888;RSQ=0.9209;ERATE=0.0008;THETA=0.0003;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 234275619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.958;LDAF=0.0451;AVGPOST=0.9976;RSQ=0.9786;ERATE=0.0007;THETA=0.0005;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234275739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0066;AVGPOST=0.9972;RSQ=0.8201;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234275810 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.822;LDAF=0.0089;AVGPOST=0.9975;RSQ=0.8783;ERATE=0.0004;THETA=0.0004;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234275855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0021;AVGPOST=0.9975;RSQ=0.6378;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234275906 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4195;AVGPOST=0.9980;RSQ=0.9972;ERATE=0.0005;THETA=0.0024;AC=918;AN=2184 GT:DS:GL:BD 0.42032966 0
1 234276013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0064;AVGPOST=0.9963;RSQ=0.7706;ERATE=0.0006;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234276014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3016;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0007;THETA=0.0002;AC=657;AN=2184 GT:DS:GL:BD 0.30082417 0
1 234276109 . TTA T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9985;RSQ=0.5756;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234276217 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7563;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234276241 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.667;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5408;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234276242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0046;AVGPOST=0.9984;RSQ=0.8680;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234276279 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7596;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234276285 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9639;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234276350 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.943;LDAF=0.7229;AVGPOST=0.9709;RSQ=0.9524;ERATE=0.0008;THETA=0.0004;AC=1582;AN=2184 GT:DS:GL:BD 0.72435898 1
1 234276351 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.943;LDAF=0.7190;AVGPOST=0.9633;RSQ=0.9405;ERATE=0.0030;THETA=0.0004;AC=1581;AN=2184 GT:DS:GL:BD 0.72390109 1
1 234276395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0852;AVGPOST=0.9996;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 234276403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234276483 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234276513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.667;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234276571 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4280;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234276606 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0251;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234276633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.878;LDAF=0.0125;AVGPOST=0.9964;RSQ=0.8808;ERATE=0.0004;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234276639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3507;AVGPOST=0.9973;RSQ=0.9958;ERATE=0.0006;THETA=0.0004;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234276888 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9220;ERATE=0.0004;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234276914 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7557;ERATE=0.0008;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234277250 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9335;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234277251 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4776;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 234277275 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9607;ERATE=0.0003;THETA=0.0023;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234277334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7418;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234277413 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8424;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234277445 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4778;AVGPOST=0.9989;RSQ=0.9985;ERATE=0.0003;THETA=0.0005;AC=1045;AN=2184 GT:DS:GL:BD 0.47847986 0
1 234277494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0176;AVGPOST=0.9989;RSQ=0.9741;ERATE=0.0003;THETA=0.0013;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234277576 rs56271368 CTT C 7424 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0439;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=96;AN=2184 GT:DS:GL:BD 0.04395605 0
1 234277579 . TTG T 1410 PASS INDEL;BAVGPOST=0.996;BRSQ=0.954;LDAF=0.0484;AVGPOST=0.9897;RSQ=0.9121;ERATE=0.0010;THETA=0.0004;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 234277600 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234277711 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7545;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234277736 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234277739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9094;ERATE=0.0003;THETA=0.0021;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234277833 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234277867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0618;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0003;THETA=0.0010;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 234277904 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4829;AVGPOST=0.9989;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=1057;AN=2184 GT:DS:GL:BD 0.48397437 0
1 234278047 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234278139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9294;ERATE=0.0003;THETA=0.0033;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234278195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.676;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4582;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234278204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0036;AVGPOST=0.9982;RSQ=0.7992;ERATE=0.0005;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234278206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8524;ERATE=0.0011;THETA=0.0024;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234278243 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234278270 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9838;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234278292 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234278325 rs113326939 CA C 4215 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9990;RSQ=0.9845;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234278432 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2895;AVGPOST=0.9987;RSQ=0.9982;ERATE=0.0004;THETA=0.0008;AC=633;AN=2184 GT:DS:GL:BD 0.28983516 0
1 234278463 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0070;AVGPOST=0.9981;RSQ=0.8821;ERATE=0.0004;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234278524 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0009;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234278561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0032;AVGPOST=0.9987;RSQ=0.8259;ERATE=0.0005;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234278564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9496;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234278587 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6616;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234278774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5400;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234278917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7535;ERATE=0.0003;THETA=0.0033;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234279035 . T TTTTC 14676 PASS INDEL;BAVGPOST=0.870;BRSQ=0.750;LDAF=0.3934;AVGPOST=0.8503;RSQ=0.7547;ERATE=0.0235;THETA=0.0004;AC=845;AN=2184 GT:DS:GL:BD 0.38690478 0
1 234279037 . T TTC 12443 PASS INDEL;BAVGPOST=0.883;BRSQ=0.769;LDAF=0.3815;AVGPOST=0.8578;RSQ=0.7705;ERATE=0.0193;THETA=0.0005;AC=826;AN=2184 GT:DS:GL:BD 0.37820512 0
1 234279039 . T TTTTC 1964 PASS INDEL;BAVGPOST=0.923;BRSQ=0.598;LDAF=0.1007;AVGPOST=0.9419;RSQ=0.7724;ERATE=0.0007;THETA=0.0007;AC=189;AN=2184 GT:DS:GL:BD 0.08653846 0
1 234279042 . T TC 33 PASS INDEL;BAVGPOST=0.985;BRSQ=0.410;LDAF=0.0280;AVGPOST=0.9679;RSQ=0.5707;ERATE=0.0005;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234279064 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9952;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234279110 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.712;LDAF=0.0039;AVGPOST=0.9976;RSQ=0.7793;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234279120 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0463;AVGPOST=0.9993;RSQ=0.9934;ERATE=0.0004;THETA=0.0005;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 234279308 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0310;AVGPOST=0.9981;RSQ=0.9740;ERATE=0.0004;THETA=0.0003;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234279373 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3354;AVGPOST=0.9976;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=734;AN=2184 GT:DS:GL:BD 0.33608058 0
1 234279453 . TG T 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234279491 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0495;AVGPOST=0.9980;RSQ=0.9854;ERATE=0.0003;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234279534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0188;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234279556 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0008;AVGPOST=0.9997;RSQ=0.8526;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234279644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1350;AVGPOST=0.9982;RSQ=0.9942;ERATE=0.0004;THETA=0.0005;AC=295;AN=2184 GT:DS:GL:BD 0.13507326 0
1 234279650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.9005;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234279755 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0499;AVGPOST=0.9996;RSQ=0.9962;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234279838 rs58265953 G GA 59625 PASS INDEL;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3379;AVGPOST=0.9968;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 234279839 . A AG 17349 PASS INDEL;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.3345;AVGPOST=0.9915;RSQ=0.9881;ERATE=0.0007;THETA=0.0004;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 234280043 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234280135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0499;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234280185 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0408;AVGPOST=0.9997;RSQ=0.9969;ERATE=0.0003;THETA=0.0008;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234280208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0010;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234280288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234280339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.882;LDAF=0.9779;AVGPOST=0.9971;RSQ=0.9460;ERATE=0.0004;THETA=0.0003;AC=2137;AN=2184 GT:DS:GL:BD 0.97847986 1
1 234280353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234280404 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0498;AVGPOST=0.9999;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234280536 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0499;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234280547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2871;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 234280572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9997;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234280630 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0456;AVGPOST=0.9981;RSQ=0.9818;ERATE=0.0003;THETA=0.0007;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234280681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0872;AVGPOST=0.9994;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 234280821 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.733;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5240;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234280822 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.965;LDAF=0.0147;AVGPOST=0.9975;RSQ=0.9361;ERATE=0.0004;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234280906 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0503;AVGPOST=0.9989;RSQ=0.9909;ERATE=0.0004;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234280927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0508;AVGPOST=0.9990;RSQ=0.9914;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234280991 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.944;LDAF=0.0144;AVGPOST=0.9989;RSQ=0.9661;ERATE=0.0004;THETA=0.0002;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234281220 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0230;AVGPOST=0.9992;RSQ=0.9852;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234281230 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0511;AVGPOST=0.9974;RSQ=0.9838;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234281319 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234281343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.569;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8305;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234281361 rs112085526 CT C 156 PASS INDEL;BAVGPOST=0.997;BRSQ=0.539;LDAF=0.0025;AVGPOST=0.9974;RSQ=0.5911;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234281396 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234281500 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3403;AVGPOST=0.9978;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=745;AN=2184 GT:DS:GL:BD 0.34111720 0
1 234281501 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0498;AVGPOST=0.9996;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234281591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234281592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0874;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=191;AN=2184 GT:DS:GL:BD 0.08745421 0
1 234281636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234281688 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5392;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234281712 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0190;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234281715 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4851;AVGPOST=0.9984;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=1061;AN=2184 GT:DS:GL:BD 0.48580587 0
1 234281799 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0499;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234281866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0409;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0003;THETA=0.0006;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234281930 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9231;ERATE=0.0006;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234281955 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0499;AVGPOST=0.9998;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234281960 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7230;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234282040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0498;AVGPOST=0.9999;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234282055 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3396;AVGPOST=0.9986;RSQ=0.9981;ERATE=0.0005;THETA=0.0004;AC=743;AN=2184 GT:DS:GL:BD 0.34020147 0
1 234282074 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0408;AVGPOST=0.9994;RSQ=0.9928;ERATE=0.0004;THETA=0.0002;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234282259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.866;LDAF=0.0287;AVGPOST=0.9953;RSQ=0.9363;ERATE=0.0005;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 234282488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0385;AVGPOST=0.9954;RSQ=0.9556;ERATE=0.0003;THETA=0.0008;AC=84;AN=2184 GT:DS:GL:BD 0.03846154 0
1 234282507 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9995;RSQ=0.9792;ERATE=0.0003;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234282594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4135;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0005;THETA=0.0005;AC=905;AN=2184 GT:DS:GL:BD 0.41437730 0
1 234282648 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0500;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234282670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0500;AVGPOST=0.9996;RSQ=0.9968;ERATE=0.0003;THETA=0.0007;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234282843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5082;AVGPOST=0.9974;RSQ=0.9971;ERATE=0.0006;THETA=0.0005;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 234282893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.2887;AVGPOST=0.9981;RSQ=0.9973;ERATE=0.0005;THETA=0.0006;AC=631;AN=2184 GT:DS:GL:BD 0.28891942 0
1 234282895 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3887;AVGPOST=0.9974;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 234282895 . A ATG 15329 PASS INDEL;BAVGPOST=0.983;BRSQ=0.974;LDAF=0.2859;AVGPOST=0.9760;RSQ=0.9668;ERATE=0.0041;THETA=0.0003;AC=628;AN=2184 GT:DS:GL:BD 0.28754580 0
1 234282905 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7582;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234282915 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234282933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0498;AVGPOST=0.9994;RSQ=0.9946;ERATE=0.0003;THETA=0.0012;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234283013 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0501;AVGPOST=0.9992;RSQ=0.9930;ERATE=0.0005;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234283053 . C CT 6235 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0522;AVGPOST=0.9976;RSQ=0.9830;ERATE=0.0003;THETA=0.0004;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 234283057 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3381;AVGPOST=0.9974;RSQ=0.9963;ERATE=0.0006;THETA=0.0010;AC=740;AN=2184 GT:DS:GL:BD 0.33882785 0
1 234283117 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.9137;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234283151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0407;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234283197 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0879;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=192;AN=2184 GT:DS:GL:BD 0.08791209 0
1 234283284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234283344 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0068;AVGPOST=0.9982;RSQ=0.8903;ERATE=0.0004;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234283550 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0500;AVGPOST=0.9995;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234283567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234283571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234283585 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.0501;AVGPOST=0.9994;RSQ=0.9945;ERATE=0.0003;THETA=0.0005;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234283627 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3451;AVGPOST=0.9966;RSQ=0.9953;ERATE=0.0005;THETA=0.0037;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 234283756 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3938;AVGPOST=0.9961;RSQ=0.9947;ERATE=0.0008;THETA=0.0008;AC=861;AN=2184 GT:DS:GL:BD 0.39423078 0
1 234283757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.975;LDAF=0.0345;AVGPOST=0.9984;RSQ=0.9844;ERATE=0.0003;THETA=0.0010;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234283842 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0883;AVGPOST=0.9997;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 234284186 . G GA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234284314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0210;AVGPOST=0.9979;RSQ=0.9627;ERATE=0.0003;THETA=0.0011;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234284442 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234284444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0497;AVGPOST=0.9994;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234284571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0494;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0007;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234284832 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234284883 . CTG C 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234284910 rs111370597 AG A 1610 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9996;RSQ=0.9830;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234284975 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.6044;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234285098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7792;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234285106 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234285114 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9325;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234285149 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9978;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234285166 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0078;AVGPOST=0.9997;RSQ=0.9806;ERATE=0.0003;THETA=0.0009;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234285190 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6531;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234285203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7891;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234285220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.573;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234285339 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234285355 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234285364 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0100;AVGPOST=0.9993;RSQ=0.9721;ERATE=0.0003;THETA=0.0005;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234285381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234285408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6213;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234285507 . G GTGAC 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4139;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234285645 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8745;ERATE=0.0004;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234285647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9656;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234285856 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234285882 rs112750101 G GA 1516 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9997;RSQ=0.9879;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234285920 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7548;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234285944 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234285949 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234285974 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0405;AVGPOST=0.9993;RSQ=0.9921;ERATE=0.0003;THETA=0.0008;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 234286072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9389;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234286091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234286245 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0043;AVGPOST=0.9990;RSQ=0.9075;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234286274 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5746;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234286286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0115;AVGPOST=0.9986;RSQ=0.9486;ERATE=0.0003;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234286310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7324;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234286327 . ATC A 68 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.9039;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234286328 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.9154;ERATE=0.0004;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234286329 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9218;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234286411 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0232;AVGPOST=0.9994;RSQ=0.9884;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234286456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0148;AVGPOST=0.9997;RSQ=0.9915;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234286535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0149;AVGPOST=0.9993;RSQ=0.9792;ERATE=0.0004;THETA=0.0014;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234286572 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0245;AVGPOST=0.9979;RSQ=0.9674;ERATE=0.0004;THETA=0.0021;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234286605 . CA C 132 PASS INDEL;BAVGPOST=0.999;BRSQ=0.645;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7267;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234286659 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0147;AVGPOST=0.9999;RSQ=0.9957;ERATE=0.0003;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234286850 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5395;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234287139 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.957;LDAF=0.0146;AVGPOST=0.9985;RSQ=0.9595;ERATE=0.0005;THETA=0.0007;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234287146 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0229;AVGPOST=0.9998;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234287271 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0232;AVGPOST=0.9992;RSQ=0.9851;ERATE=0.0003;THETA=0.0006;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234287329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4615;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234287389 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9512;ERATE=0.0003;THETA=0.0011;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234287403 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1430;AVGPOST=0.9935;RSQ=0.9812;ERATE=0.0004;THETA=0.0014;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 234287428 . TA T 179 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234287467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0096;AVGPOST=0.9988;RSQ=0.9506;ERATE=0.0003;THETA=0.0055;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234287591 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0237;AVGPOST=0.9988;RSQ=0.9830;ERATE=0.0003;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234287699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.666;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.6824;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234287732 . T TC 437 PASS INDEL;BAVGPOST=0.900;BRSQ=0.296;LDAF=0.0700;AVGPOST=0.9129;RSQ=0.5224;ERATE=0.0019;THETA=0.0026;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 234287734 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9706;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234287773 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.878;LDAF=0.0060;AVGPOST=0.9989;RSQ=0.9116;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234287799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9489;ERATE=0.0004;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234287837 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2886;AVGPOST=0.9908;RSQ=0.9880;ERATE=0.0005;THETA=0.0004;AC=635;AN=2184 GT:DS:GL:BD 0.29075092 0
1 234287864 rs34013941 A AG 31926 PASS INDEL;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3701;AVGPOST=0.9854;RSQ=0.9800;ERATE=0.0016;THETA=0.0032;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 234287915 . TAATC T 356 PASS INDEL;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7091;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234287935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0074;AVGPOST=0.9985;RSQ=0.9288;ERATE=0.0004;THETA=0.0015;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234287957 . CATT C 14553 PASS INDEL;BAVGPOST=0.961;BRSQ=0.935;LDAF=0.2824;AVGPOST=0.9467;RSQ=0.9283;ERATE=0.0050;THETA=0.0009;AC=617;AN=2184 GT:DS:GL:BD 0.28250915 0
1 234287961 . A ATTATTATTG 22945 PASS INDEL;BAVGPOST=0.959;BRSQ=0.929;LDAF=0.2936;AVGPOST=0.9533;RSQ=0.9378;ERATE=0.0049;THETA=0.0003;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 234287967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.591;LDAF=0.0044;AVGPOST=0.9945;RSQ=0.4704;ERATE=0.0007;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234287970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.945;BRSQ=0.571;LDAF=0.0895;AVGPOST=0.9130;RSQ=0.5743;ERATE=0.0109;THETA=0.0008;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 234287973 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.903;BRSQ=0.650;LDAF=0.1819;AVGPOST=0.8715;RSQ=0.6523;ERATE=0.0246;THETA=0.0003;AC=326;AN=2184 GT:DS:GL:BD 0.14926741 0
1 234287999 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.505;LDAF=0.0584;AVGPOST=0.9497;RSQ=0.6386;ERATE=0.0048;THETA=0.0006;AC=100;AN=2184 GT:DS:GL:BD 0.04578755 0
1 234288028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0093;AVGPOST=0.9994;RSQ=0.9734;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234288055 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8538;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234288090 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0231;AVGPOST=0.9996;RSQ=0.9924;ERATE=0.0003;THETA=0.0007;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234288155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9047;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234288200 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9983;RSQ=0.9298;ERATE=0.0003;THETA=0.0019;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234288208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7937;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234288281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3691;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234288348 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.725;LDAF=0.0024;AVGPOST=0.9986;RSQ=0.7863;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234288365 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.822;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7129;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234288408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0092;AVGPOST=0.9995;RSQ=0.9757;ERATE=0.0003;THETA=0.0012;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234288505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0093;AVGPOST=0.9993;RSQ=0.9698;ERATE=0.0003;THETA=0.0009;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234288544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0215;AVGPOST=0.9989;RSQ=0.9797;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234288780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234289001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234289039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234289304 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0094;AVGPOST=0.9989;RSQ=0.9603;ERATE=0.0003;THETA=0.0011;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234289314 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0084;AVGPOST=0.9968;RSQ=0.8623;ERATE=0.0004;THETA=0.0041;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234289329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0041;AVGPOST=0.9999;RSQ=0.9892;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234289339 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9164;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234289356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3689;AVGPOST=0.9966;RSQ=0.9952;ERATE=0.0003;THETA=0.0003;AC=808;AN=2184 GT:DS:GL:BD 0.36996338 0
1 234289375 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3373;AVGPOST=0.9971;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 234289541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0017;AVGPOST=0.9974;RSQ=0.3397;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234289624 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0133;AVGPOST=0.9956;RSQ=0.8616;ERATE=0.0008;THETA=0.0030;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234289628 . GCTAA G 525 PASS INDEL;BAVGPOST=0.997;BRSQ=0.685;LDAF=0.0077;AVGPOST=0.9955;RSQ=0.7855;ERATE=0.0004;THETA=0.0033;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234289631 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.794;LDAF=0.0132;AVGPOST=0.9904;RSQ=0.7307;ERATE=0.0005;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234289636 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6547;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234289653 rs55815641 C CA 1159 PASS INDEL;BAVGPOST=0.987;BRSQ=0.860;LDAF=0.0413;AVGPOST=0.9904;RSQ=0.9165;ERATE=0.0005;THETA=0.0011;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234289674 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0117;AVGPOST=0.9963;RSQ=0.8761;ERATE=0.0007;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234289675 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.673;LDAF=0.0048;AVGPOST=0.9968;RSQ=0.7044;ERATE=0.0005;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234289765 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0104;AVGPOST=0.9974;RSQ=0.9065;ERATE=0.0004;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234289799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0111;AVGPOST=0.9978;RSQ=0.9220;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234289807 . C CA 481 PASS INDEL;BAVGPOST=0.952;BRSQ=0.598;LDAF=0.1069;AVGPOST=0.8835;RSQ=0.4800;ERATE=0.0253;THETA=0.0103;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234289815 rs113934396 A AAC 567 PASS INDEL;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0102;AVGPOST=0.9984;RSQ=0.9403;ERATE=0.0004;THETA=0.0013;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234289835 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0037;AVGPOST=0.9957;RSQ=0.5720;ERATE=0.0009;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234289971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0096;AVGPOST=0.9997;RSQ=0.9876;ERATE=0.0003;THETA=0.0008;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234289982 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0117;AVGPOST=0.9982;RSQ=0.9434;ERATE=0.0003;THETA=0.0009;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234290042 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8550;ERATE=0.0003;THETA=0.0010;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234290074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6374;ERATE=0.0004;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234290108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7520;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234290187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0073;AVGPOST=0.9991;RSQ=0.9489;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234290229 . T TC 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234290240 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0012;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234290261 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9816;ERATE=0.0003;THETA=0.0009;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234290262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234290266 . ATG A 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5693;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234290285 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.980;LDAF=0.3482;AVGPOST=0.9908;RSQ=0.9884;ERATE=0.0010;THETA=0.0007;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234290494 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0061;AVGPOST=0.9988;RSQ=0.9164;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234290511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3120;AVGPOST=0.9968;RSQ=0.9964;ERATE=0.0004;THETA=0.0007;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 234290532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0036;AVGPOST=0.9994;RSQ=0.9287;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234290551 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0102;AVGPOST=0.9992;RSQ=0.9683;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234290566 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234290652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3805;AVGPOST=0.9978;RSQ=0.9972;ERATE=0.0006;THETA=0.0007;AC=833;AN=2184 GT:DS:GL:BD 0.38141027 0
1 234290709 . C CTCAA 32433 PASS INDEL;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1079;AVGPOST=0.9968;RSQ=0.9900;ERATE=0.0004;THETA=0.0021;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 234290820 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8916;ERATE=0.0003;THETA=0.0069;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234290843 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5800;ERATE=0.0004;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234290883 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234290946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3796;AVGPOST=0.9973;RSQ=0.9967;ERATE=0.0005;THETA=0.0006;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 234290957 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3825;AVGPOST=0.9972;RSQ=0.9968;ERATE=0.0003;THETA=0.0026;AC=837;AN=2184 GT:DS:GL:BD 0.38324177 0
1 234290980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0168;AVGPOST=0.9988;RSQ=0.9657;ERATE=0.0003;THETA=0.0006;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234291090 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3792;AVGPOST=0.9973;RSQ=0.9968;ERATE=0.0005;THETA=0.0009;AC=830;AN=2184 GT:DS:GL:BD 0.38003662 0
1 234291147 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.921;BRSQ=0.851;LDAF=0.2905;AVGPOST=0.9143;RSQ=0.8601;ERATE=0.0126;THETA=0.0006;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 234291150 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.599;LDAF=0.0923;AVGPOST=0.9227;RSQ=0.6376;ERATE=0.0145;THETA=0.0049;AC=143;AN=2184 GT:DS:GL:BD 0.06547619 0
1 234291155 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.547;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4239;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234291273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0099;AVGPOST=0.9993;RSQ=0.9791;ERATE=0.0003;THETA=0.0010;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234291441 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6082;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234291538 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.900;LDAF=0.0162;AVGPOST=0.9929;RSQ=0.8452;ERATE=0.0004;THETA=0.0013;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234291690 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0036;AVGPOST=0.9992;RSQ=0.8922;ERATE=0.0004;THETA=0.0030;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234291716 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0045;AVGPOST=0.9986;RSQ=0.8673;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234291746 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1395;AVGPOST=0.9972;RSQ=0.9937;ERATE=0.0005;THETA=0.0006;AC=304;AN=2184 GT:DS:GL:BD 0.13919415 0
1 234291928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.750;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0029;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234291984 . G GTAA 1812 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0115;AVGPOST=0.9974;RSQ=0.9204;ERATE=0.0005;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234292017 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234292078 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1395;AVGPOST=0.9994;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 234292082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.875;LDAF=0.0154;AVGPOST=0.9942;RSQ=0.8541;ERATE=0.0003;THETA=0.0002;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234292102 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.1398;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0009;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 234292135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234292147 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7494;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234292169 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0026;AVGPOST=0.9989;RSQ=0.8537;ERATE=0.0005;THETA=0.0030;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234292170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234292188 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234292204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.906;LDAF=0.0150;AVGPOST=0.9962;RSQ=0.9027;ERATE=0.0003;THETA=0.0012;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234292220 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9081;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234292509 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0145;AVGPOST=0.9979;RSQ=0.9484;ERATE=0.0004;THETA=0.0026;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234292540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234292545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0220;AVGPOST=0.9997;RSQ=0.9937;ERATE=0.0003;THETA=0.0013;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234292707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5703;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234292792 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6652;ERATE=0.0005;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234292861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1236;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0003;THETA=0.0008;AC=270;AN=2184 GT:DS:GL:BD 0.12362637 0
1 234292867 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234292878 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0055;AVGPOST=0.9989;RSQ=0.9198;ERATE=0.0003;THETA=0.0074;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234292927 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0296;AVGPOST=0.9990;RSQ=0.9884;ERATE=0.0003;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234292928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9172;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234293012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1397;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0003;THETA=0.0004;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 234293099 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6025;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234293239 . T TA 4654 PASS INDEL;BAVGPOST=0.998;BRSQ=0.973;LDAF=0.0382;AVGPOST=0.9968;RSQ=0.9669;ERATE=0.0005;THETA=0.0020;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 234293284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234293290 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234293291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234293309 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9777;ERATE=0.0003;THETA=0.0006;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234293341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5771;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234293341 . TTTG T 851 PASS INDEL;BAVGPOST=0.999;BRSQ=0.935;LDAF=0.0114;AVGPOST=0.9919;RSQ=0.7106;ERATE=0.0014;THETA=0.0018;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234293351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1615;AVGPOST=0.9993;RSQ=0.9984;ERATE=0.0004;THETA=0.0004;AC=353;AN=2184 GT:DS:GL:BD 0.16163003 0
1 234293422 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1232;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0004;THETA=0.0022;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 234293439 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0060;AVGPOST=0.9990;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234293548 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234293551 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234293611 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7227;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234293616 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3863;AVGPOST=0.9983;RSQ=0.9978;ERATE=0.0004;THETA=0.0008;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 234293652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5159;AVGPOST=0.9973;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=1129;AN=2184 GT:DS:GL:BD 0.51694137 1
1 234293730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1233;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 234293746 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.516;LDAF=0.0265;AVGPOST=0.9741;RSQ=0.6213;ERATE=0.0085;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234293786 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0265;AVGPOST=0.9992;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 234293813 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8262;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234293854 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0264;AVGPOST=0.9995;RSQ=0.9927;ERATE=0.0003;THETA=0.0006;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 234293928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6620;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234293963 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1379;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0004;THETA=0.0002;AC=301;AN=2184 GT:DS:GL:BD 0.13782051 0
1 234294033 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5378;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234294054 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8824;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234294187 rs10570605 TTTA T 18542 PASS INDEL;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1233;AVGPOST=0.9972;RSQ=0.9922;ERATE=0.0007;THETA=0.0005;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 234294219 . A AT 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4242;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234294290 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8562;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234294297 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234294316 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1236;AVGPOST=0.9984;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 234294373 . CT C 117 PASS INDEL;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0018;AVGPOST=0.9982;RSQ=0.5659;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234294411 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0053;AVGPOST=0.9961;RSQ=0.7491;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234294464 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7971;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234294718 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6248;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234294799 . A AC 19 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6770;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234294903 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0109;AVGPOST=0.9980;RSQ=0.9318;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234294913 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234294944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234294952 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234294978 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234295077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234295149 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1598;AVGPOST=0.9985;RSQ=0.9968;ERATE=0.0004;THETA=0.0010;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 234295189 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0223;AVGPOST=0.9993;RSQ=0.9866;ERATE=0.0004;THETA=0.0010;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234295292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3069;AVGPOST=0.9946;RSQ=0.9927;ERATE=0.0008;THETA=0.0005;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234295293 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9976;RSQ=0.7673;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234295313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0031;AVGPOST=0.9996;RSQ=0.9445;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234295377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1210;AVGPOST=0.9990;RSQ=0.9974;ERATE=0.0004;THETA=0.0008;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 234295415 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5992;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234295566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9765;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234295628 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234295643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234295678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9988;RSQ=0.8596;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234295682 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234295691 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1396;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0006;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 234295772 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234295776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7669;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234295825 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234295837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7441;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234296030 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9566;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234296085 . AAGACCCAGGC A 319 PASS INDEL;BAVGPOST=1.000;BRSQ=0.740;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5790;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234296106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1396;AVGPOST=0.9988;RSQ=0.9971;ERATE=0.0004;THETA=0.0009;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 234296107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234296356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0155;AVGPOST=0.9982;RSQ=0.9602;ERATE=0.0004;THETA=0.0012;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234296453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1230;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0007;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 234296574 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234296614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0012;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234296691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.917;LDAF=0.0155;AVGPOST=0.9981;RSQ=0.9577;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234296737 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9670;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234296740 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234296744 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1409;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0008;AC=308;AN=2184 GT:DS:GL:BD 0.14102565 0
1 234296782 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234296894 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234296950 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9881;ERATE=0.0003;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234296956 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234296962 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234296983 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3055;AVGPOST=0.9979;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 234297037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1394;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 234297054 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234297127 . A AC 3940 PASS INDEL;BAVGPOST=0.998;BRSQ=0.959;LDAF=0.0216;AVGPOST=0.9986;RSQ=0.9697;ERATE=0.0004;THETA=0.0007;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234297248 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234297261 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.983;LDAF=0.1214;AVGPOST=0.9989;RSQ=0.9968;ERATE=0.0003;THETA=0.0006;AC=266;AN=2184 GT:DS:GL:BD 0.12179487 0
1 234297303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1237;AVGPOST=0.9983;RSQ=0.9958;ERATE=0.0004;THETA=0.0006;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 234297348 . A AT 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5188;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234297408 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1230;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0011;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 234297533 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5324;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234297592 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7724;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234297731 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1394;AVGPOST=0.9984;RSQ=0.9973;ERATE=0.0003;THETA=0.0016;AC=305;AN=2184 GT:DS:GL:BD 0.13965201 0
1 234297769 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1332;AVGPOST=0.9993;RSQ=0.9981;ERATE=0.0004;THETA=0.0006;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 234298113 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9469;ERATE=0.0004;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234298165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1373;AVGPOST=0.9971;RSQ=0.9934;ERATE=0.0006;THETA=0.0007;AC=302;AN=2184 GT:DS:GL:BD 0.13827839 0
1 234298175 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1414;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0005;THETA=0.0013;AC=310;AN=2184 GT:DS:GL:BD 0.14194140 0
1 234298205 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234298490 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8258;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234298491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9096;ERATE=0.0003;THETA=0.0040;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234298599 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9594;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234298610 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234298702 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5857;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234298727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7777;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234298757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6695;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234298758 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0808;AVGPOST=0.9992;RSQ=0.9967;ERATE=0.0003;THETA=0.0009;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 234298868 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1641;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=359;AN=2184 GT:DS:GL:BD 0.16437729 0
1 234298925 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9963;ERATE=0.0003;THETA=0.0021;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234298961 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7393;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234298963 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234298987 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234298999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.938;LDAF=0.0291;AVGPOST=0.9963;RSQ=0.9515;ERATE=0.0004;THETA=0.0032;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 234299038 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9932;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234299062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6684;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234299094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9936;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234299135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.966;LDAF=0.1053;AVGPOST=0.9913;RSQ=0.9655;ERATE=0.0003;THETA=0.0007;AC=229;AN=2184 GT:DS:GL:BD 0.10485348 0
1 234299155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0044;AVGPOST=0.9989;RSQ=0.8918;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234299171 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9998;RSQ=0.9939;ERATE=0.0003;THETA=0.0007;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234299184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234299196 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9763;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234299255 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8036;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234299302 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234299332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234299340 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0228;AVGPOST=0.9993;RSQ=0.9851;ERATE=0.0004;THETA=0.0006;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234299479 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234299639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9202;ERATE=0.0004;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234299664 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5181;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234299669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9403;ERATE=0.0004;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234299726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.374;LDAF=0.0093;AVGPOST=0.9858;RSQ=0.4463;ERATE=0.0036;THETA=0.0018;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234299753 rs11432013 C CA 19083 PASS INDEL;BAVGPOST=0.980;BRSQ=0.953;LDAF=0.1638;AVGPOST=0.9637;RSQ=0.9284;ERATE=0.0078;THETA=0.0010;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 234299841 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234299848 . TTC T 25 PASS INDEL;BAVGPOST=0.985;BRSQ=0.262;LDAF=0.0797;AVGPOST=0.8800;RSQ=0.3271;ERATE=0.0080;THETA=0.0018;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234299866 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234299875 rs35482256 CCTT C 299 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7912;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234299951 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9861;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234299961 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0114;AVGPOST=0.9980;RSQ=0.9459;ERATE=0.0003;THETA=0.0008;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234300170 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.922;LDAF=0.7969;AVGPOST=0.9511;RSQ=0.9102;ERATE=0.0268;THETA=0.0003;AC=1768;AN=2184 GT:DS:GL:BD 0.80952382 1
1 234300218 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0467;AVGPOST=0.9996;RSQ=0.9965;ERATE=0.0003;THETA=0.0010;AC=102;AN=2184 GT:DS:GL:BD 0.04670330 0
1 234300247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1380;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=303;AN=2184 GT:DS:GL:BD 0.13873626 0
1 234300259 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9860;ERATE=0.0003;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234300293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.770;LDAF=0.0047;AVGPOST=0.9965;RSQ=0.7192;ERATE=0.0004;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234300350 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234300401 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234300462 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1321;AVGPOST=0.9969;RSQ=0.9935;ERATE=0.0005;THETA=0.0006;AC=288;AN=2184 GT:DS:GL:BD 0.13186814 0
1 234300512 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0018;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234300542 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0101;AVGPOST=0.9997;RSQ=0.9862;ERATE=0.0003;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234300577 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7491;ERATE=0.0005;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234300587 . TG T 241 PASS INDEL;BAVGPOST=0.996;BRSQ=0.909;LDAF=0.0224;AVGPOST=0.9976;RSQ=0.9558;ERATE=0.0004;THETA=0.0012;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234300593 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.670;LDAF=0.9249;AVGPOST=0.9251;RSQ=0.5967;ERATE=0.0184;THETA=0.0005;AC=2076;AN=2184 GT:DS:GL:BD 0.95054942 1
1 234300636 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0292;AVGPOST=0.9995;RSQ=0.9929;ERATE=0.0003;THETA=0.0006;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234300841 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0066;AVGPOST=0.9995;RSQ=0.9674;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234300918 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234301035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234301051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234301068 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0102;AVGPOST=0.9998;RSQ=0.9900;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234301148 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0103;AVGPOST=0.9993;RSQ=0.9715;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234301224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0078;AVGPOST=0.9976;RSQ=0.8931;ERATE=0.0004;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234301252 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0104;AVGPOST=0.9994;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234301268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0814;AVGPOST=0.9987;RSQ=0.9939;ERATE=0.0005;THETA=0.0007;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 234301292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0809;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0008;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 234301464 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0108;AVGPOST=0.9989;RSQ=0.9677;ERATE=0.0003;THETA=0.0011;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234301482 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0003;THETA=0.0032;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234301519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234301560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7359;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234301650 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234301655 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9562;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234301679 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9461;ERATE=0.0003;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234301693 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6223;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234301749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0022;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234301778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0224;AVGPOST=0.9989;RSQ=0.9782;ERATE=0.0003;THETA=0.0007;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234301822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0236;AVGPOST=0.9990;RSQ=0.9808;ERATE=0.0004;THETA=0.0008;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234301823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6614;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234301840 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0100;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234301844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9920;ERATE=0.0003;THETA=0.0009;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234301959 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9369;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234302012 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6781;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234302023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.705;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5054;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234302139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0032;AVGPOST=0.9993;RSQ=0.8990;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234302318 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9902;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234302590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234302591 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=0.9991;RSQ=0.8781;ERATE=0.0003;THETA=0.0020;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234302615 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0102;AVGPOST=0.9992;RSQ=0.9708;ERATE=0.0004;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234302859 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9665;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234302883 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0026;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234302895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234302970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9849;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234303184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.9968;AVGPOST=0.9984;RSQ=0.8283;ERATE=0.0004;THETA=0.0006;AC=2178;AN=2184 GT:DS:GL:BD 0.99725276 1
1 234303270 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234303303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0055;AVGPOST=0.9977;RSQ=0.8707;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234303327 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0806;AVGPOST=0.9996;RSQ=0.9979;ERATE=0.0003;THETA=0.0019;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 234303403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0321;AVGPOST=0.9997;RSQ=0.9964;ERATE=0.0003;THETA=0.0011;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 234303409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.9005;ERATE=0.0003;THETA=0.0011;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234303456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0013;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234303564 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6009;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234303566 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0321;AVGPOST=0.9998;RSQ=0.9969;ERATE=0.0003;THETA=0.0018;AC=70;AN=2184 GT:DS:GL:BD 0.03205128 0
1 234303628 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4804;AVGPOST=0.9981;RSQ=0.9980;ERATE=0.0003;THETA=0.0009;AC=1046;AN=2184 GT:DS:GL:BD 0.47893772 0
1 234303727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234303796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8770;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234303797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0083;AVGPOST=0.9999;RSQ=0.9928;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234303807 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.8097;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234303852 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6684;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234303969 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4818;AVGPOST=0.9984;RSQ=0.9984;ERATE=0.0003;THETA=0.0005;AC=1050;AN=2184 GT:DS:GL:BD 0.48076922 0
1 234304002 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234304041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3087;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0012;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234304065 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.885;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8414;ERATE=0.0004;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234304145 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.4812;AVGPOST=0.9989;RSQ=0.9986;ERATE=0.0005;THETA=0.0007;AC=1049;AN=2184 GT:DS:GL:BD 0.48031136 0
1 234304171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1286;AVGPOST=0.9986;RSQ=0.9965;ERATE=0.0003;THETA=0.0034;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 234304177 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.695;LDAF=0.0045;AVGPOST=0.9979;RSQ=0.8132;ERATE=0.0004;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234304184 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.9021;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234304249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.796;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5736;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234304269 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0166;AVGPOST=0.9996;RSQ=0.9892;ERATE=0.0003;THETA=0.0015;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234304475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9860;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234304502 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0131;AVGPOST=0.9973;RSQ=0.9187;ERATE=0.0005;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234304520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0253;AVGPOST=0.9968;RSQ=0.9566;ERATE=0.0004;THETA=0.0012;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234304632 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5874;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234304692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6106;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234304728 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1301;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0010;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 234304788 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.768;LDAF=0.0029;AVGPOST=0.9968;RSQ=0.6262;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234304805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9807;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234304907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0809;AVGPOST=0.9991;RSQ=0.9963;ERATE=0.0003;THETA=0.0006;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 234304928 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9167;ERATE=0.0003;THETA=0.0010;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234304955 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0064;AVGPOST=0.9971;RSQ=0.8119;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234304968 . ATCT A 1318 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0102;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234305006 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1289;AVGPOST=0.9996;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 234305028 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0063;AVGPOST=0.9998;RSQ=0.9848;ERATE=0.0003;THETA=0.0018;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234305176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3084;AVGPOST=0.9985;RSQ=0.9979;ERATE=0.0003;THETA=0.0014;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234305207 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0928;AVGPOST=0.9991;RSQ=0.9963;ERATE=0.0004;THETA=0.0005;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234305232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0021;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234305308 rs66581310 ACAGGGACATACTGCCTGT A 8141 PASS INDEL;BAVGPOST=0.991;BRSQ=0.864;LDAF=0.0342;AVGPOST=0.9934;RSQ=0.9310;ERATE=0.0006;THETA=0.0007;AC=71;AN=2184 GT:DS:GL:BD 0.03250916 0
1 234305361 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.8964;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234305504 rs112663821 C CTGTTT 1894 PASS INDEL;BAVGPOST=0.998;BRSQ=0.920;LDAF=0.0166;AVGPOST=0.9971;RSQ=0.9300;ERATE=0.0004;THETA=0.0011;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234305526 . G GTTTTT 1569 PASS INDEL;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0157;AVGPOST=0.9968;RSQ=0.9133;ERATE=0.0007;THETA=0.0006;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234305545 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0105;AVGPOST=0.9990;RSQ=0.9647;ERATE=0.0003;THETA=0.0006;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234305549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.850;LDAF=0.0057;AVGPOST=0.9970;RSQ=0.7942;ERATE=0.0013;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234305552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.847;LDAF=0.0109;AVGPOST=0.9947;RSQ=0.8147;ERATE=0.0004;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234305599 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0079;AVGPOST=0.9982;RSQ=0.9054;ERATE=0.0004;THETA=0.0009;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234305615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.437;LDAF=0.0052;AVGPOST=0.9927;RSQ=0.4393;ERATE=0.0014;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234305621 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0247;AVGPOST=0.9984;RSQ=0.9751;ERATE=0.0004;THETA=0.0007;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234305638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.837;LDAF=0.0182;AVGPOST=0.9887;RSQ=0.7557;ERATE=0.0006;THETA=0.0007;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234305644 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0146;AVGPOST=0.9953;RSQ=0.8736;ERATE=0.0005;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234305707 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0112;AVGPOST=0.9977;RSQ=0.9115;ERATE=0.0004;THETA=0.0010;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234305766 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0055;AVGPOST=0.9980;RSQ=0.8345;ERATE=0.0006;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234305868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234305917 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0111;AVGPOST=0.9998;RSQ=0.9908;ERATE=0.0003;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234305939 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0242;AVGPOST=0.9997;RSQ=0.9958;ERATE=0.0003;THETA=0.0016;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234306017 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9172;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234306036 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1285;AVGPOST=0.9989;RSQ=0.9972;ERATE=0.0005;THETA=0.0024;AC=281;AN=2184 GT:DS:GL:BD 0.12866300 0
1 234306058 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0014;AVGPOST=0.9988;RSQ=0.6293;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234306205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0309;AVGPOST=0.9994;RSQ=0.9918;ERATE=0.0003;THETA=0.0025;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234306289 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9933;ERATE=0.0003;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234306436 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0363;AVGPOST=0.9996;RSQ=0.9954;ERATE=0.0004;THETA=0.0009;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234306553 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0811;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0003;THETA=0.0010;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 234306554 rs113325898 G GGTTGCA 6120 PASS INDEL;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0222;AVGPOST=0.9979;RSQ=0.9664;ERATE=0.0003;THETA=0.0012;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234306562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0822;AVGPOST=0.9977;RSQ=0.9903;ERATE=0.0004;THETA=0.0008;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 234306565 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234306616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.983;LDAF=0.9677;AVGPOST=0.9993;RSQ=0.9911;ERATE=0.0003;THETA=0.0015;AC=2114;AN=2184 GT:DS:GL:BD 0.96794873 1
1 234306619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5072;AVGPOST=0.9947;RSQ=0.9938;ERATE=0.0006;THETA=0.0007;AC=1104;AN=2184 GT:DS:GL:BD 0.50549453 1
1 234306826 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234306965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.4741;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234306988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=0.9994;RSQ=0.9760;ERATE=0.0004;THETA=0.0064;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234306998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1099;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0004;THETA=0.0006;AC=240;AN=2184 GT:DS:GL:BD 0.10989011 0
1 234307060 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.9331;AVGPOST=0.9986;RSQ=0.9918;ERATE=0.0004;THETA=0.0006;AC=2039;AN=2184 GT:DS:GL:BD 0.93360806 1
1 234307106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234307155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1101;AVGPOST=0.9994;RSQ=0.9982;ERATE=0.0003;THETA=0.0092;AC=241;AN=2184 GT:DS:GL:BD 0.11034799 0
1 234307156 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9396;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234307222 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234307275 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234307371 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0129;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234307378 . C CA 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.762;LDAF=0.0019;AVGPOST=0.9972;RSQ=0.4217;ERATE=0.0004;THETA=0.0147;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234307528 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.946;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9743;ERATE=0.0003;THETA=0.0018;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234307773 . CCAGCTCATCTT C 352 PASS INDEL;BAVGPOST=1.000;BRSQ=0.734;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4467;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234307805 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0025;AVGPOST=0.9984;RSQ=0.7653;ERATE=0.0003;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234307922 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.3392;AVGPOST=0.9966;RSQ=0.9961;ERATE=0.0005;THETA=0.0010;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 234308123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.978;LDAF=0.4018;AVGPOST=0.9850;RSQ=0.9820;ERATE=0.0012;THETA=0.0010;AC=880;AN=2184 GT:DS:GL:BD 0.40293041 0
1 234308129 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0037;AVGPOST=0.9984;RSQ=0.8427;ERATE=0.0003;THETA=0.0069;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234308291 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234308344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0051;AVGPOST=0.9984;RSQ=0.8609;ERATE=0.0004;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234308538 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7788;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234308586 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.4552;AVGPOST=0.9929;RSQ=0.9919;ERATE=0.0003;THETA=0.0008;AC=999;AN=2184 GT:DS:GL:BD 0.45741758 0
1 234308642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234308701 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234308707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0940;AVGPOST=0.9976;RSQ=0.9930;ERATE=0.0003;THETA=0.0012;AC=205;AN=2184 GT:DS:GL:BD 0.09386447 0
1 234308902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7085;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234308931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9888;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234308932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234308968 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0057;AVGPOST=0.9989;RSQ=0.9439;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234309299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9827;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234309302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7242;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234309337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0263;AVGPOST=0.9993;RSQ=0.9884;ERATE=0.0004;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234309351 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7955;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234309566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234309653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7563;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234309797 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234309830 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234309850 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6049;ERATE=0.0004;THETA=0.0043;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234310081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234310217 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234310244 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234310253 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9631;ERATE=0.0004;THETA=0.0013;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234310265 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7515;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234310391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0568;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0010;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 234310417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234310508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234310536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234310546 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0025;AVGPOST=0.9988;RSQ=0.7995;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234310640 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234310712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8015;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234310728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0005;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234310757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6692;AVGPOST=0.9982;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=1461;AN=2184 GT:DS:GL:BD 0.66895604 1
1 234310842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0054;AVGPOST=0.9994;RSQ=0.9461;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234310850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9573;AVGPOST=0.9991;RSQ=0.9918;ERATE=0.0003;THETA=0.0008;AC=2091;AN=2184 GT:DS:GL:BD 0.95741761 1
1 234310993 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234311146 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6516;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234311293 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234311398 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0034;AVGPOST=0.9979;RSQ=0.7226;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234311745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.928;LDAF=0.0176;AVGPOST=0.9976;RSQ=0.9447;ERATE=0.0003;THETA=0.0028;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234311786 . TG T 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0031;AVGPOST=0.9961;RSQ=0.5435;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234311862 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234311889 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0026;AVGPOST=0.9974;RSQ=0.6455;ERATE=0.0004;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234312089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9941;ERATE=0.0003;THETA=0.0018;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234312332 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9431;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234312654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7284;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234312721 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234312815 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0736;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 234312866 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.5445;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234312940 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7526;ERATE=0.0006;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234313007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0049;AVGPOST=0.9990;RSQ=0.9051;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234313021 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1206;AVGPOST=0.9979;RSQ=0.9928;ERATE=0.0005;THETA=0.0004;AC=262;AN=2184 GT:DS:GL:BD 0.11996337 0
1 234313055 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234313092 . A AGT 142 PASS INDEL;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234313311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234313322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7577;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234313467 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234313567 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1147;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0005;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 234313605 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0736;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0007;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 234313777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9322;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234314064 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234314101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9694;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234314150 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.761;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234314360 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1146;AVGPOST=0.9975;RSQ=0.9919;ERATE=0.0004;THETA=0.0005;AC=250;AN=2184 GT:DS:GL:BD 0.11446887 0
1 234314546 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0778;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0005;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234314596 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9914;ERATE=0.0003;THETA=0.0009;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234314620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234314701 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8852;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234314760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8090;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234314828 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0089;AVGPOST=0.9980;RSQ=0.9204;ERATE=0.0003;THETA=0.0007;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234314926 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234314942 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0038;AVGPOST=0.9988;RSQ=0.8701;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234314979 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8696;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234315087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8187;ERATE=0.0004;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234315213 . T TC 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0024;AVGPOST=0.9978;RSQ=0.6503;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234315261 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234315354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0186;AVGPOST=0.9983;RSQ=0.9650;ERATE=0.0003;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234315355 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0792;AVGPOST=0.9989;RSQ=0.9946;ERATE=0.0004;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234315478 rs71583785 AT A 32252 PASS INDEL;BAVGPOST=0.990;BRSQ=0.986;LDAF=0.3167;AVGPOST=0.9933;RSQ=0.9919;ERATE=0.0004;THETA=0.0005;AC=695;AN=2184 GT:DS:GL:BD 0.31822345 0
1 234315481 . AT A 13 PASS INDEL;BAVGPOST=0.998;BRSQ=0.634;LDAF=0.0040;AVGPOST=0.9960;RSQ=0.5737;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234315536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0778;AVGPOST=0.9998;RSQ=0.9991;ERATE=0.0003;THETA=0.0006;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234315566 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6856;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234315589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234315628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234315654 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6953;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234315763 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9981;RSQ=0.5164;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234315794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0544;AVGPOST=0.9990;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234315904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7941;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234315938 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3507;AVGPOST=0.9965;RSQ=0.9950;ERATE=0.0006;THETA=0.0005;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234315970 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6783;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234316044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234316140 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234316144 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0091;AVGPOST=0.9998;RSQ=0.9910;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234316189 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7084;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234316303 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9534;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234316313 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0188;AVGPOST=0.9972;RSQ=0.9321;ERATE=0.0003;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234316455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6721;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234316478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0017;AVGPOST=0.9990;RSQ=0.7660;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234316604 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0040;AVGPOST=0.9978;RSQ=0.7835;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234316645 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0023;AVGPOST=0.9992;RSQ=0.8563;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234316682 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8332;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234316787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8684;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234316807 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0029;AVGPOST=0.9985;RSQ=0.7598;ERATE=0.0005;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234316809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.618;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6344;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234316909 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.709;LDAF=0.0018;AVGPOST=0.9977;RSQ=0.4927;ERATE=0.0005;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234316915 . C CA 6454 PASS INDEL;BAVGPOST=0.982;BRSQ=0.878;LDAF=0.0801;AVGPOST=0.9623;RSQ=0.8165;ERATE=0.0080;THETA=0.0010;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 234316928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9300;ERATE=0.0004;THETA=0.0008;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234317128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2734;AVGPOST=0.9954;RSQ=0.9925;ERATE=0.0009;THETA=0.0008;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 234317311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9294;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234317415 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234317582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.936;LDAF=0.0555;AVGPOST=0.9931;RSQ=0.9465;ERATE=0.0006;THETA=0.0004;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 234317596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8860;ERATE=0.0003;THETA=0.0020;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234318035 . AGATT A 561 PASS INDEL;BAVGPOST=0.998;BRSQ=0.866;LDAF=0.0086;AVGPOST=0.9950;RSQ=0.7734;ERATE=0.0008;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234318038 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234318143 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234318151 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234318333 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6947;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234318347 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6996;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234318364 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9586;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234318366 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9243;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234318644 . C CA 400 PASS INDEL;BAVGPOST=0.879;BRSQ=0.218;LDAF=0.0944;AVGPOST=0.8899;RSQ=0.5526;ERATE=0.0006;THETA=0.0005;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 234318832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.884;LDAF=0.0076;AVGPOST=0.9967;RSQ=0.8063;ERATE=0.0005;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234318872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.947;LDAF=0.0576;AVGPOST=0.9926;RSQ=0.9437;ERATE=0.0006;THETA=0.0009;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234319174 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.883;LDAF=0.0806;AVGPOST=0.9972;RSQ=0.9870;ERATE=0.0005;THETA=0.0018;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 234319180 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.180;LDAF=0.0074;AVGPOST=0.9864;RSQ=0.2919;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234319183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.814;LDAF=0.0067;AVGPOST=0.9961;RSQ=0.7497;ERATE=0.0008;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234319184 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.856;LDAF=0.0122;AVGPOST=0.9885;RSQ=0.5934;ERATE=0.0007;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234319229 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.968;LDAF=0.0237;AVGPOST=0.9964;RSQ=0.9438;ERATE=0.0004;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234319312 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.940;BRSQ=0.792;LDAF=0.1322;AVGPOST=0.9758;RSQ=0.9272;ERATE=0.0005;THETA=0.0005;AC=269;AN=2184 GT:DS:GL:BD 0.12316850 0
1 234319382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.886;BRSQ=0.804;LDAF=0.6595;AVGPOST=0.9662;RSQ=0.9574;ERATE=0.0005;THETA=0.0005;AC=1462;AN=2184 GT:DS:GL:BD 0.66941392 1
1 234319699 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6895;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234319741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.954;LDAF=0.0796;AVGPOST=0.9975;RSQ=0.9878;ERATE=0.0004;THETA=0.0008;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 234319819 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.0787;AVGPOST=0.9980;RSQ=0.9924;ERATE=0.0004;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 234319884 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.898;BRSQ=0.796;LDAF=0.6489;AVGPOST=0.8595;RSQ=0.7605;ERATE=0.0562;THETA=0.0011;AC=1462;AN=2184 GT:DS:GL:BD 0.66941392 1
1 234319910 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0037;AVGPOST=0.9970;RSQ=0.6748;ERATE=0.0008;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234319994 . G GC 5564 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0779;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234319995 rs5781779 C CT 18888 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0777;AVGPOST=0.9996;RSQ=0.9978;ERATE=0.0003;THETA=0.0012;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234320046 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0779;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0004;THETA=0.0009;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234320077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6075;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234320168 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.691;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7425;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234320212 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0780;AVGPOST=0.9994;RSQ=0.9969;ERATE=0.0003;THETA=0.0029;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234320250 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1214;AVGPOST=0.9964;RSQ=0.9893;ERATE=0.0003;THETA=0.0006;AC=263;AN=2184 GT:DS:GL:BD 0.12042125 0
1 234320311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234320334 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0015;AVGPOST=0.9980;RSQ=0.5299;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234320335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0371;AVGPOST=0.9982;RSQ=0.9795;ERATE=0.0003;THETA=0.0120;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234320403 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.0773;AVGPOST=0.9996;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 234320419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0776;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 234320429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0547;AVGPOST=0.9985;RSQ=0.9905;ERATE=0.0003;THETA=0.0005;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234320437 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0773;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0003;THETA=0.0006;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 234320531 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6622;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234320561 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0007;AVGPOST=0.9990;RSQ=0.4848;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234320644 . CA C 341 PASS INDEL;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0029;AVGPOST=0.9988;RSQ=0.8324;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234320653 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0763;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0004;THETA=0.0006;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 234320671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234320721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.9663;AVGPOST=0.9993;RSQ=0.9930;ERATE=0.0003;THETA=0.0015;AC=2111;AN=2184 GT:DS:GL:BD 0.96657509 1
1 234320769 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0788;AVGPOST=0.9994;RSQ=0.9973;ERATE=0.0003;THETA=0.0011;AC=172;AN=2184 GT:DS:GL:BD 0.07875458 0
1 234320816 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.3210;AVGPOST=0.9965;RSQ=0.9957;ERATE=0.0003;THETA=0.0008;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 234320836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234321086 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0036;AVGPOST=0.9991;RSQ=0.8990;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234321267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234321301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.909;LDAF=0.0228;AVGPOST=0.9949;RSQ=0.9142;ERATE=0.0005;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234321386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0037;AVGPOST=0.9964;RSQ=0.6493;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234321473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0766;AVGPOST=0.9991;RSQ=0.9958;ERATE=0.0003;THETA=0.0014;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 234321533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234321578 . G GT 7 PASS INDEL;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5857;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234321754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7702;ERATE=0.0003;THETA=0.0039;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234321855 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0179;AVGPOST=0.9993;RSQ=0.9837;ERATE=0.0003;THETA=0.0008;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234321880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0016;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234321946 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.2296;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234321996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0074;AVGPOST=0.9997;RSQ=0.9825;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234322005 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234322013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234322067 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0024;AVGPOST=0.9985;RSQ=0.7507;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234322162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.7917;ERATE=0.0007;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234322340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234322350 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234322380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234322416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0043;AVGPOST=0.9975;RSQ=0.7972;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234322451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234322488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234322522 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0061;AVGPOST=0.9995;RSQ=0.9686;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234322563 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6745;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234322572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0369;AVGPOST=0.9982;RSQ=0.9835;ERATE=0.0004;THETA=0.0010;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234322779 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0051;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234322802 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.6131;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234322999 . CA C 390 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9329;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234323039 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234323107 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234323113 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234323144 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234323199 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9997;RSQ=0.9728;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234323200 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7226;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234323210 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234323326 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.910;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8610;ERATE=0.0003;THETA=0.0029;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234323372 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234323445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234323572 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8577;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234323747 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0547;AVGPOST=0.9965;RSQ=0.9781;ERATE=0.0005;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234324048 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9560;ERATE=0.0004;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234324188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9074;ERATE=0.0005;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234324240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.8932;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234324269 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0019;AVGPOST=0.9975;RSQ=0.5030;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234324454 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9997;RSQ=0.8957;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234324482 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0053;AVGPOST=0.9978;RSQ=0.8610;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234324494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8132;AVGPOST=0.9956;RSQ=0.9903;ERATE=0.0004;THETA=0.0007;AC=1777;AN=2184 GT:DS:GL:BD 0.81364471 1
1 234324529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5305;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234324533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9371;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234324572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0054;AVGPOST=0.9989;RSQ=0.9099;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234324616 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9577;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234324641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0034;AVGPOST=0.9975;RSQ=0.7163;ERATE=0.0008;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234324668 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234324714 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9408;ERATE=0.0003;THETA=0.0014;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234324770 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234324856 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234324896 . C CTT 35 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234324899 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0798;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0007;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234324914 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0796;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0006;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234325041 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5149;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234325058 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9992;RSQ=0.9880;ERATE=0.0004;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234325068 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.847;LDAF=0.0061;AVGPOST=0.9964;RSQ=0.7672;ERATE=0.0005;THETA=0.0009;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234325166 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0799;AVGPOST=0.9987;RSQ=0.9936;ERATE=0.0004;THETA=0.0009;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234325175 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.5162;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234325209 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8795;AVGPOST=0.9957;RSQ=0.9858;ERATE=0.0003;THETA=0.0006;AC=1922;AN=2184 GT:DS:GL:BD 0.88003665 1
1 234325282 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.0793;AVGPOST=0.9947;RSQ=0.9768;ERATE=0.0004;THETA=0.0013;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234325292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.1322;AVGPOST=0.9949;RSQ=0.9883;ERATE=0.0005;THETA=0.0006;AC=291;AN=2184 GT:DS:GL:BD 0.13324176 0
1 234325302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.772;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4785;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234325307 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0736;AVGPOST=0.9970;RSQ=0.9873;ERATE=0.0003;THETA=0.0005;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 234325526 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234325739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0473;AVGPOST=0.9993;RSQ=0.9931;ERATE=0.0003;THETA=0.0010;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 234325751 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7529;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234325857 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6710;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234325879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9797;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234325884 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234325912 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8396;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234326080 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5322;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234326172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0189;AVGPOST=0.9990;RSQ=0.9813;ERATE=0.0003;THETA=0.0006;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234326191 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.927;LDAF=0.0781;AVGPOST=0.9964;RSQ=0.9826;ERATE=0.0004;THETA=0.0020;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234326198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4704;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234326408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5907;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234326467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0091;AVGPOST=0.9979;RSQ=0.9174;ERATE=0.0003;THETA=0.0009;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234326532 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9037;ERATE=0.0004;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234326571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0792;AVGPOST=0.9993;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234326635 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0187;AVGPOST=0.9994;RSQ=0.9863;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234326657 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8057;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234326680 rs111650971 GGAA G 11762 PASS INDEL;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0805;AVGPOST=0.9977;RSQ=0.9906;ERATE=0.0004;THETA=0.0007;AC=176;AN=2184 GT:DS:GL:BD 0.08058608 0
1 234326698 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0010;AVGPOST=0.9983;RSQ=0.3420;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234326744 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0793;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0004;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234326810 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.875;LDAF=0.0028;AVGPOST=0.9993;RSQ=0.8887;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234326885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234326955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.932;LDAF=0.0226;AVGPOST=0.9960;RSQ=0.9252;ERATE=0.0006;THETA=0.0007;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234327042 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0048;AVGPOST=0.9977;RSQ=0.8291;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234327061 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0791;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0009;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234327174 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7320;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234327298 . ACAAACCACCTC A 1229 PASS INDEL;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0045;AVGPOST=0.9990;RSQ=0.9175;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234327331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0791;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0008;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234327337 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8721;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234327373 . AAC A 2685 PASS INDEL;BAVGPOST=0.979;BRSQ=0.858;LDAF=0.0715;AVGPOST=0.9926;RSQ=0.9649;ERATE=0.0006;THETA=0.0006;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 234327388 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0023;AVGPOST=0.9987;RSQ=0.7336;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234327456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6044;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234327495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0793;AVGPOST=0.9994;RSQ=0.9967;ERATE=0.0004;THETA=0.0005;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234327565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0791;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0007;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234327709 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0542;AVGPOST=0.9993;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234327736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0792;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0009;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234327849 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9696;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234328010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6151;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234328134 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8674;ERATE=0.0004;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234328205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6380;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234328223 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6811;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234328352 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0036;AVGPOST=0.9983;RSQ=0.8252;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234328373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234328376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0795;AVGPOST=0.9990;RSQ=0.9955;ERATE=0.0004;THETA=0.0007;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234328456 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0791;AVGPOST=0.9998;RSQ=0.9990;ERATE=0.0003;THETA=0.0002;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234328473 . TTAAA T 18346 PASS INDEL;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0751;AVGPOST=0.9991;RSQ=0.9953;ERATE=0.0004;THETA=0.0014;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 234328501 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0022;AVGPOST=0.9985;RSQ=0.7171;ERATE=0.0008;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234328576 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234328577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8737;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234328618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0792;AVGPOST=0.9995;RSQ=0.9976;ERATE=0.0004;THETA=0.0007;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234328650 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234328656 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0567;AVGPOST=0.9994;RSQ=0.9951;ERATE=0.0004;THETA=0.0007;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 234328735 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234328977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0303;AVGPOST=0.9973;RSQ=0.9628;ERATE=0.0004;THETA=0.0012;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 234329251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0792;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0006;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234329313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0018;AVGPOST=0.9973;RSQ=0.5111;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234329325 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0541;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0005;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234329435 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0791;AVGPOST=0.9995;RSQ=0.9975;ERATE=0.0003;THETA=0.0007;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234329458 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0791;AVGPOST=0.9991;RSQ=0.9962;ERATE=0.0003;THETA=0.0010;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234329564 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0412;AVGPOST=0.9983;RSQ=0.9839;ERATE=0.0005;THETA=0.0005;AC=89;AN=2184 GT:DS:GL:BD 0.04075092 0
1 234329578 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8197;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234329616 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234329633 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0801;AVGPOST=0.9988;RSQ=0.9939;ERATE=0.0004;THETA=0.0011;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234329673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0039;AVGPOST=0.9985;RSQ=0.8652;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234329705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.8033;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234329809 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0791;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0010;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234329865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0218;AVGPOST=0.9981;RSQ=0.9658;ERATE=0.0005;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234329879 . TA T 8123 PASS INDEL;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0790;AVGPOST=0.9978;RSQ=0.9897;ERATE=0.0004;THETA=0.0017;AC=173;AN=2184 GT:DS:GL:BD 0.07921246 0
1 234329880 . AT A 44691 PASS INDEL;BAVGPOST=0.988;BRSQ=0.954;LDAF=0.8711;AVGPOST=0.9731;RSQ=0.9178;ERATE=0.0048;THETA=0.0008;AC=1914;AN=2184 GT:DS:GL:BD 0.87637365 1
1 234329882 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.913;LDAF=0.8606;AVGPOST=0.9635;RSQ=0.8966;ERATE=0.0055;THETA=0.0007;AC=1896;AN=2184 GT:DS:GL:BD 0.86813188 1
1 234329882 rs57680971 T TA 46961 PASS INDEL;BAVGPOST=0.876;BRSQ=0.806;LDAF=0.5414;AVGPOST=0.8261;RSQ=0.7747;ERATE=0.0268;THETA=0.0006;AC=1119;AN=2184 GT:DS:GL:BD 0.51236266 1
1 234329902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0541;AVGPOST=0.9983;RSQ=0.9887;ERATE=0.0004;THETA=0.0021;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234330040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8397;ERATE=0.0003;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234330082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0014;AVGPOST=0.9984;RSQ=0.5805;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234330097 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4138;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0004;THETA=0.0006;AC=906;AN=2184 GT:DS:GL:BD 0.41483516 0
1 234330365 rs35987176 TA T 33552 PASS INDEL;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3856;AVGPOST=0.9891;RSQ=0.9872;ERATE=0.0021;THETA=0.0005;AC=846;AN=2184 GT:DS:GL:BD 0.38736263 0
1 234330527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4830;AVGPOST=0.9969;RSQ=0.9965;ERATE=0.0006;THETA=0.0008;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 234330571 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3205;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0004;THETA=0.0007;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 234330620 . C CA 11961 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0540;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0003;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234330647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5316;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234330666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0120;AVGPOST=0.9998;RSQ=0.9915;ERATE=0.0003;THETA=0.0008;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234330711 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234330759 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234330793 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4512;AVGPOST=0.9974;RSQ=0.9977;ERATE=0.0003;THETA=0.0013;AC=986;AN=2184 GT:DS:GL:BD 0.45146519 0
1 234330797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9895;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234330815 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7786;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234330856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3378;AVGPOST=0.9973;RSQ=0.9960;ERATE=0.0012;THETA=0.0005;AC=735;AN=2184 GT:DS:GL:BD 0.33653846 0
1 234330878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4379;AVGPOST=0.9978;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=957;AN=2184 GT:DS:GL:BD 0.43818682 0
1 234330879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234331041 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0750;AVGPOST=0.9997;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 234331193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0190;AVGPOST=0.9992;RSQ=0.9834;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234331211 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8669;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234331257 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9795;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234331277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3379;AVGPOST=0.9974;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=737;AN=2184 GT:DS:GL:BD 0.33745420 0
1 234331341 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6760;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234331348 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234331454 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3895;AVGPOST=0.9973;RSQ=0.9968;ERATE=0.0005;THETA=0.0004;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 234331509 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.794;LDAF=0.0027;AVGPOST=0.9975;RSQ=0.6689;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234331515 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4765;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234331546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0005;AVGPOST=0.9992;RSQ=0.3785;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234331581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0419;AVGPOST=0.9984;RSQ=0.9878;ERATE=0.0003;THETA=0.0006;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 234331684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8104;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234331715 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4920;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234331852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0046;AVGPOST=0.9970;RSQ=0.7467;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234331917 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234332010 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234332053 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234332135 . TCTG T 37 PASS INDEL;BAVGPOST=0.997;BRSQ=0.640;LDAF=0.0081;AVGPOST=0.9899;RSQ=0.5017;ERATE=0.0026;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234332343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.747;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8356;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234332412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.986;LDAF=0.5162;AVGPOST=0.9749;RSQ=0.9741;ERATE=0.0030;THETA=0.0004;AC=1132;AN=2184 GT:DS:GL:BD 0.51831502 1
1 234332460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.576;LDAF=0.0136;AVGPOST=0.9845;RSQ=0.5584;ERATE=0.0023;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234332500 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0415;AVGPOST=0.9976;RSQ=0.9816;ERATE=0.0003;THETA=0.0004;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 234332581 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.734;LDAF=0.0052;AVGPOST=0.9985;RSQ=0.8782;ERATE=0.0004;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234332690 . G GA 39 PASS INDEL;BAVGPOST=0.991;BRSQ=0.493;LDAF=0.0138;AVGPOST=0.9824;RSQ=0.4778;ERATE=0.0063;THETA=0.0013;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234332742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3449;AVGPOST=0.9982;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 234332751 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5452;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234332831 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0884;AVGPOST=0.9997;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 234332865 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0053;AVGPOST=0.9991;RSQ=0.9183;ERATE=0.0004;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234332880 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0007;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234332932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6773;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234332933 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0548;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0015;AC=120;AN=2184 GT:DS:GL:BD 0.05494506 0
1 234332994 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7755;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234333042 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7344;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234333139 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234333231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0003;THETA=0.0007;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234333255 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.8185;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234333259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3203;AVGPOST=0.9987;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=702;AN=2184 GT:DS:GL:BD 0.32142857 0
1 234333273 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234333316 rs72072507 CATGATCACTCCCTG C 5448 PASS INDEL;BAVGPOST=0.994;BRSQ=0.862;LDAF=0.0211;AVGPOST=0.9989;RSQ=0.9779;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234333349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234333371 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0045;AVGPOST=0.9991;RSQ=0.9166;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234333376 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5468;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234333434 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0137;AVGPOST=0.9954;RSQ=0.8617;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234333459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8441;ERATE=0.0005;THETA=0.0022;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234333543 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234333602 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6159;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234333607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9695;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234333637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6072;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234333675 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8558;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234333827 rs35387750 G GT 515 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9230;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234333850 . A AT 37 PASS INDEL;BAVGPOST=1.000;BRSQ=0.781;LDAF=0.0027;AVGPOST=0.9976;RSQ=0.6805;ERATE=0.0004;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234333878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7836;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234334018 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5567;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234334150 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9014;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234334234 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.6299;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234334263 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.3770;ERATE=0.0007;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234334266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6751;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234334372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0066;AVGPOST=0.9981;RSQ=0.8915;ERATE=0.0004;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234334399 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9469;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234334565 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.619;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6793;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234334599 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234334733 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5323;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234334741 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8889;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234334766 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5367;AVGPOST=0.9981;RSQ=0.9979;ERATE=0.0005;THETA=0.0007;AC=1175;AN=2184 GT:DS:GL:BD 0.53800368 1
1 234335010 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7756;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234335029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6151;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234335046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3212;AVGPOST=0.9994;RSQ=0.9992;ERATE=0.0004;THETA=0.0006;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 234335066 . CAGA C 1790 PASS INDEL;BAVGPOST=0.996;BRSQ=0.894;LDAF=0.0215;AVGPOST=0.9977;RSQ=0.9589;ERATE=0.0003;THETA=0.0003;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234335072 rs59176675 TAAA T 1875 PASS INDEL;BAVGPOST=0.996;BRSQ=0.893;LDAF=0.0214;AVGPOST=0.9973;RSQ=0.9543;ERATE=0.0003;THETA=0.0006;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234335087 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.993;LDAF=0.3209;AVGPOST=0.9990;RSQ=0.9987;ERATE=0.0004;THETA=0.0004;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 234335219 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9396;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234335227 . C CA 328 PASS INDEL;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0076;AVGPOST=0.9939;RSQ=0.6998;ERATE=0.0009;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234335239 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8776;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234335394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3884;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0004;THETA=0.0003;AC=850;AN=2184 GT:DS:GL:BD 0.38919413 0
1 234335447 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3211;AVGPOST=0.9988;RSQ=0.9984;ERATE=0.0003;THETA=0.0006;AC=703;AN=2184 GT:DS:GL:BD 0.32188645 0
1 234335470 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234335486 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3452;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0007;THETA=0.0003;AC=752;AN=2184 GT:DS:GL:BD 0.34432235 0
1 234335508 rs59158580 C CA 41422 PASS INDEL;BAVGPOST=0.989;BRSQ=0.986;LDAF=0.3075;AVGPOST=0.9924;RSQ=0.9910;ERATE=0.0005;THETA=0.0005;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234335568 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8953;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234335569 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234335601 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9995;RSQ=0.8369;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234335648 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0045;AVGPOST=0.9987;RSQ=0.8976;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234335709 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7335;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234335741 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0067;AVGPOST=0.9995;RSQ=0.9728;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234335826 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5087;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234335923 . CTG C 82 PASS INDEL;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6227;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234335961 . C CG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234336071 . C CT 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.520;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4169;ERATE=0.0008;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234336093 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234336126 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234336157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0678;AVGPOST=0.9987;RSQ=0.9929;ERATE=0.0004;THETA=0.0004;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234336178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0035;AVGPOST=0.9986;RSQ=0.8684;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234336367 rs111950633 A AT 58 PASS INDEL;BAVGPOST=0.993;BRSQ=0.532;LDAF=0.0127;AVGPOST=0.9812;RSQ=0.4171;ERATE=0.0048;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234336395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234336465 . CAAG C 243 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0029;AVGPOST=0.9972;RSQ=0.6323;ERATE=0.0007;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234336517 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234336778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5372;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234336792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7771;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234336930 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.8091;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234337139 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0415;AVGPOST=0.9983;RSQ=0.9872;ERATE=0.0004;THETA=0.0003;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234337266 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1553;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 234337268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.981;LDAF=0.0387;AVGPOST=0.9981;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234337393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234337407 . CA C 63 PASS INDEL;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6313;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234337441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7629;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234337485 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0578;AVGPOST=0.9992;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234337559 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.670;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234337578 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.986;LDAF=0.2304;AVGPOST=0.9901;RSQ=0.9810;ERATE=0.0004;THETA=0.0003;AC=501;AN=2184 GT:DS:GL:BD 0.22939560 0
1 234337589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234337608 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9054;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234337703 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234337749 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6701;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234337893 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234337919 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234337953 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0883;AVGPOST=0.9989;RSQ=0.9956;ERATE=0.0003;THETA=0.0039;AC=193;AN=2184 GT:DS:GL:BD 0.08836997 0
1 234337955 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0670;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0011;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234338043 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.3040;AVGPOST=0.9947;RSQ=0.9935;ERATE=0.0003;THETA=0.0004;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 234338077 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0028;AVGPOST=0.9976;RSQ=0.7016;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234338099 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.639;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4777;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234338112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0538;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0006;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234338295 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7702;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234338303 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.5295;AVGPOST=0.9995;RSQ=0.9993;ERATE=0.0003;THETA=0.0006;AC=1159;AN=2184 GT:DS:GL:BD 0.53067768 1
1 234338338 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4756;AVGPOST=0.9989;RSQ=0.9985;ERATE=0.0005;THETA=0.0004;AC=1041;AN=2184 GT:DS:GL:BD 0.47664836 0
1 234338478 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0044;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234338705 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9682;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234338710 . C CA 400 PASS INDEL;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0046;AVGPOST=0.9994;RSQ=0.9466;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234338771 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4078;AVGPOST=0.9967;RSQ=0.9950;ERATE=0.0006;THETA=0.0006;AC=890;AN=2184 GT:DS:GL:BD 0.40750915 0
1 234338781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6599;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234338787 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0248;AVGPOST=0.9989;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234338788 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4949;AVGPOST=0.9966;RSQ=0.9964;ERATE=0.0005;THETA=0.0004;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 234338806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234338990 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.874;LDAF=0.0050;AVGPOST=0.9985;RSQ=0.8734;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234339155 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0045;AVGPOST=0.9983;RSQ=0.8517;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234339213 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0766;AVGPOST=0.9985;RSQ=0.9925;ERATE=0.0004;THETA=0.0009;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 234339353 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.979;LDAF=0.3311;AVGPOST=0.9894;RSQ=0.9870;ERATE=0.0012;THETA=0.0004;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 234339655 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234339722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6237;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234339771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6772;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234339826 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3461;AVGPOST=0.9977;RSQ=0.9968;ERATE=0.0004;THETA=0.0004;AC=754;AN=2184 GT:DS:GL:BD 0.34523809 0
1 234339908 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4373;AVGPOST=0.9966;RSQ=0.9957;ERATE=0.0005;THETA=0.0007;AC=959;AN=2184 GT:DS:GL:BD 0.43910256 0
1 234339957 . G GA 105 PASS INDEL;BAVGPOST=0.980;BRSQ=0.548;LDAF=0.0398;AVGPOST=0.9520;RSQ=0.4963;ERATE=0.0091;THETA=0.0003;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234339974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5782;ERATE=0.0004;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234339999 . T TATATATTATC 1603 PASS INDEL;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0060;AVGPOST=0.9973;RSQ=0.8097;ERATE=0.0005;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234340011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6343;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234340091 rs58516723 C CAA 128308 PASS INDEL;BAVGPOST=0.996;BRSQ=0.985;LDAF=0.8804;AVGPOST=0.9970;RSQ=0.9893;ERATE=0.0004;THETA=0.0005;AC=1923;AN=2184 GT:DS:GL:BD 0.88049453 1
1 234340171 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234340197 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0055;AVGPOST=0.9998;RSQ=0.9844;ERATE=0.0003;THETA=0.0013;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234340200 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234340271 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0274;AVGPOST=0.9995;RSQ=0.9917;ERATE=0.0003;THETA=0.0028;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 234340379 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0210;AVGPOST=0.9996;RSQ=0.9925;ERATE=0.0003;THETA=0.0012;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234340453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9755;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234340656 . AG A 116 PASS INDEL;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7045;ERATE=0.0005;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234340868 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8968;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234340873 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234340957 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.805;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6200;ERATE=0.0003;THETA=0.0046;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234341055 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0024;AVGPOST=0.9991;RSQ=0.8649;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234341062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8857;ERATE=0.0003;THETA=0.0026;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234341202 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.788;LDAF=0.0102;AVGPOST=0.9908;RSQ=0.6619;ERATE=0.0016;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234341251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.652;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5611;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234341253 . GTTGTAC G 1021 PASS INDEL;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0062;AVGPOST=0.9995;RSQ=0.9590;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234341321 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9516;ERATE=0.0004;THETA=0.0028;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234341330 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8363;ERATE=0.0006;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234341397 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.843;LDAF=0.9959;AVGPOST=0.9963;RSQ=0.6687;ERATE=0.0005;THETA=0.0004;AC=2177;AN=2184 GT:DS:GL:BD 0.99679488 1
1 234341444 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234341461 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9652;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234341492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234341673 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0475;AVGPOST=0.9981;RSQ=0.9848;ERATE=0.0003;THETA=0.0039;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 234341779 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3213;AVGPOST=0.9916;RSQ=0.9888;ERATE=0.0022;THETA=0.0042;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 234341970 . T TGGAGC 163 PASS INDEL;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0032;AVGPOST=0.9970;RSQ=0.6101;ERATE=0.0004;THETA=0.0032;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234342067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.988;LDAF=0.4504;AVGPOST=0.9874;RSQ=0.9872;ERATE=0.0010;THETA=0.0041;AC=982;AN=2184 GT:DS:GL:BD 0.44963369 0
1 234342120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5810;ERATE=0.0003;THETA=0.0025;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234342166 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.753;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.3809;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234342247 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9328;ERATE=0.0004;THETA=0.0092;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234342252 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.943;LDAF=0.0370;AVGPOST=0.9910;RSQ=0.9011;ERATE=0.0009;THETA=0.0083;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234342335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.564;LDAF=0.0013;AVGPOST=0.9988;RSQ=0.6854;ERATE=0.0003;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234342448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0065;AVGPOST=0.9987;RSQ=0.9249;ERATE=0.0003;THETA=0.0024;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234342678 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0119;AVGPOST=0.9987;RSQ=0.9569;ERATE=0.0003;THETA=0.0009;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234342712 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9539;ERATE=0.0004;THETA=0.0019;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234342774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.984;LDAF=0.7520;AVGPOST=0.9899;RSQ=0.9810;ERATE=0.0027;THETA=0.0012;AC=1645;AN=2184 GT:DS:GL:BD 0.75320512 1
1 234342936 . C CA 22 PASS INDEL;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0054;AVGPOST=0.9931;RSQ=0.4660;ERATE=0.0033;THETA=0.0089;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234342998 . GC G 43 PASS INDEL;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4317;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234343290 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234343339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3013;AVGPOST=0.9986;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=659;AN=2184 GT:DS:GL:BD 0.30173993 0
1 234343343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8251;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234343415 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3645;AVGPOST=0.9968;RSQ=0.9954;ERATE=0.0005;THETA=0.0005;AC=795;AN=2184 GT:DS:GL:BD 0.36401099 0
1 234343559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234343564 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234343670 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0079;AVGPOST=0.9992;RSQ=0.9596;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234343684 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0032;AVGPOST=0.9988;RSQ=0.8246;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234343870 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7383;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=1612;AN=2184 GT:DS:GL:BD 0.73809522 1
1 234343873 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0076;AVGPOST=0.9993;RSQ=0.9648;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234343924 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234343990 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0049;AVGPOST=0.9986;RSQ=0.9115;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234344093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3176;AVGPOST=0.9968;RSQ=0.9948;ERATE=0.0003;THETA=0.0004;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 234344113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9993;RSQ=0.5029;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234344139 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9992;RSQ=0.8946;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234344186 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9404;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234344254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.3016;AVGPOST=0.9990;RSQ=0.9986;ERATE=0.0004;THETA=0.0003;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 234344295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7326;AVGPOST=0.9981;RSQ=0.9962;ERATE=0.0004;THETA=0.0047;AC=1601;AN=2184 GT:DS:GL:BD 0.73305863 1
1 234344379 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0036;AVGPOST=0.9997;RSQ=0.9599;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234344491 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234344692 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234344791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7089;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234344904 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5533;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234345001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0027;AVGPOST=0.9986;RSQ=0.8106;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234345129 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.990;LDAF=0.0364;AVGPOST=0.9988;RSQ=0.9843;ERATE=0.0004;THETA=0.0004;AC=79;AN=2184 GT:DS:GL:BD 0.03617216 0
1 234345284 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8292;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234345425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8844;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234345444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8804;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234345661 . GA G 31 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6545;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234345691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8236;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234345789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0048;AVGPOST=0.9988;RSQ=0.8983;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234345836 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.6042;ERATE=0.0005;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234345849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8586;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234345856 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.891;LDAF=0.0052;AVGPOST=0.9982;RSQ=0.8756;ERATE=0.0003;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234346017 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9983;RSQ=0.8493;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234346094 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234346158 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234346352 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6269;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234346416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7582;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234346459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0083;AVGPOST=0.9992;RSQ=0.9594;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234346511 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5130;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234346549 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0077;AVGPOST=0.9968;RSQ=0.8829;ERATE=0.0003;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234346653 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5615;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234346769 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.767;LDAF=0.0061;AVGPOST=0.9965;RSQ=0.7888;ERATE=0.0004;THETA=0.0016;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234346898 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0905;AVGPOST=0.9974;RSQ=0.9900;ERATE=0.0004;THETA=0.0003;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 234346911 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234347097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4930;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234347166 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7511;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234347245 . A AC 34 PASS INDEL;BAVGPOST=0.998;BRSQ=0.616;LDAF=0.0051;AVGPOST=0.9927;RSQ=0.4521;ERATE=0.0020;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234347247 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3055;AVGPOST=0.9958;RSQ=0.9947;ERATE=0.0004;THETA=0.0005;AC=669;AN=2184 GT:DS:GL:BD 0.30631867 0
1 234347257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9987;RSQ=0.7553;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234347275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234347419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234347646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6690;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234347696 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5704;ERATE=0.0004;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234347703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0395;AVGPOST=0.9980;RSQ=0.9763;ERATE=0.0003;THETA=0.0002;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 234347759 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.885;LDAF=0.0194;AVGPOST=0.9979;RSQ=0.9532;ERATE=0.0003;THETA=0.0007;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234347787 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0032;AVGPOST=0.9982;RSQ=0.7853;ERATE=0.0003;THETA=0.0032;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234347793 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6271;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234347835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0341;AVGPOST=0.9956;RSQ=0.9546;ERATE=0.0006;THETA=0.0007;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234347886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0910;AVGPOST=0.9988;RSQ=0.9944;ERATE=0.0003;THETA=0.0003;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 234347982 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.4050;AVGPOST=0.9913;RSQ=0.9878;ERATE=0.0006;THETA=0.0012;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 234347998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9424;ERATE=0.0004;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234348091 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234348092 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0051;AVGPOST=0.9990;RSQ=0.9181;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234348137 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.849;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0004;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234348211 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7871;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234348213 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.860;LDAF=0.0046;AVGPOST=0.9987;RSQ=0.8757;ERATE=0.0012;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234348234 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0068;AVGPOST=0.9986;RSQ=0.9069;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234348241 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234348294 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.813;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6493;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234348339 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.761;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234348402 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.989;LDAF=0.2261;AVGPOST=0.9942;RSQ=0.9888;ERATE=0.0004;THETA=0.0009;AC=494;AN=2184 GT:DS:GL:BD 0.22619048 0
1 234348423 . C CTTAA 237 PASS INDEL;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234348425 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.990;LDAF=0.5213;AVGPOST=0.9913;RSQ=0.9889;ERATE=0.0003;THETA=0.0062;AC=1139;AN=2184 GT:DS:GL:BD 0.52152014 1
1 234348652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234348653 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6301;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234348760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0005;AVGPOST=0.9990;RSQ=0.3642;ERATE=0.0003;THETA=0.0032;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234348794 . AG A 169 PASS INDEL;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234348944 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8872;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234348990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4319;AVGPOST=0.9977;RSQ=0.9966;ERATE=0.0003;THETA=0.0018;AC=944;AN=2184 GT:DS:GL:BD 0.43223444 0
1 234349002 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0020;AVGPOST=0.9991;RSQ=0.8171;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234349084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0848;AVGPOST=0.9989;RSQ=0.9949;ERATE=0.0003;THETA=0.0003;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 234349191 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.861;LDAF=0.0107;AVGPOST=0.9975;RSQ=0.9086;ERATE=0.0003;THETA=0.0035;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234349224 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0238;AVGPOST=0.9991;RSQ=0.9854;ERATE=0.0003;THETA=0.0005;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234349331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5018;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234349485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.1539;AVGPOST=0.9933;RSQ=0.9805;ERATE=0.0020;THETA=0.0005;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 234349506 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4990;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234349596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2678;AVGPOST=0.9963;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 234349737 . TC T 33 PASS INDEL;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4787;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234349957 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8293;ERATE=0.0003;THETA=0.0054;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234350827 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0033;AVGPOST=0.9982;RSQ=0.7730;ERATE=0.0004;THETA=0.0051;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234350874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4802;ERATE=0.0005;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234351132 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2928;AVGPOST=0.9971;RSQ=0.9962;ERATE=0.0006;THETA=0.0005;AC=640;AN=2184 GT:DS:GL:BD 0.29304031 0
1 234351268 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.890;LDAF=0.0047;AVGPOST=0.9977;RSQ=0.8006;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234351328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3298;AVGPOST=0.9984;RSQ=0.9976;ERATE=0.0004;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 234351473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.557;LDAF=0.0149;AVGPOST=0.9840;RSQ=0.6105;ERATE=0.0041;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234351498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1886;AVGPOST=0.9938;RSQ=0.9863;ERATE=0.0003;THETA=0.0009;AC=409;AN=2184 GT:DS:GL:BD 0.18727106 0
1 234351607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5429;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234351707 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234351791 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.5488;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234351919 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5470;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234352087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234352106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0049;AVGPOST=0.9973;RSQ=0.7798;ERATE=0.0005;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234352115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7946;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234352192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9751;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234352333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234352347 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8448;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234352349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3287;AVGPOST=0.9994;RSQ=0.9990;ERATE=0.0003;THETA=0.0005;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 234352364 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.823;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9099;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234352413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.994;LDAF=0.2062;AVGPOST=0.9959;RSQ=0.9919;ERATE=0.0004;THETA=0.0002;AC=449;AN=2184 GT:DS:GL:BD 0.20558608 0
1 234352449 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.6135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234352464 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0157;AVGPOST=0.9965;RSQ=0.8966;ERATE=0.0006;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234352507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0024;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234352527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6055;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234352582 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.922;LDAF=0.0051;AVGPOST=0.9982;RSQ=0.8694;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234352606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4325;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234352610 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.790;LDAF=0.0025;AVGPOST=0.9981;RSQ=0.6591;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234352620 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.689;LDAF=0.0032;AVGPOST=0.9973;RSQ=0.6478;ERATE=0.0010;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234352781 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234352808 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6465;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=1415;AN=2184 GT:DS:GL:BD 0.64789379 1
1 234352899 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.988;LDAF=0.4506;AVGPOST=0.9906;RSQ=0.9881;ERATE=0.0027;THETA=0.0004;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 234353053 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4306;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=942;AN=2184 GT:DS:GL:BD 0.43131867 0
1 234353075 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234353176 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7034;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234353466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2939;AVGPOST=0.9983;RSQ=0.9977;ERATE=0.0005;THETA=0.0003;AC=642;AN=2184 GT:DS:GL:BD 0.29395604 0
1 234353467 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5518;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234353474 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0019;AVGPOST=0.9974;RSQ=0.4651;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234353505 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2985;AVGPOST=0.9987;RSQ=0.9983;ERATE=0.0003;THETA=0.0014;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 234353634 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234353694 . C CT 354 PASS INDEL;BAVGPOST=0.999;BRSQ=0.831;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8808;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234353861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.927;LDAF=0.0402;AVGPOST=0.9945;RSQ=0.9524;ERATE=0.0003;THETA=0.0022;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 234353947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1340;AVGPOST=0.9998;RSQ=0.9994;ERATE=0.0003;THETA=0.0006;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 234353976 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234354014 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234354056 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0367;AVGPOST=0.9995;RSQ=0.9946;ERATE=0.0003;THETA=0.0041;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234354170 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1354;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0003;THETA=0.0022;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 234354220 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0371;AVGPOST=0.9993;RSQ=0.9914;ERATE=0.0003;THETA=0.0007;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 234354244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1358;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0003;THETA=0.0023;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 234354364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9373;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234354436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234354538 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.8067;ERATE=0.0003;THETA=0.0017;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234354595 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6403;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234354630 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9626;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234354638 . T TA 10988 PASS INDEL;BAVGPOST=0.995;BRSQ=0.976;LDAF=0.1023;AVGPOST=0.9950;RSQ=0.9825;ERATE=0.0005;THETA=0.0003;AC=221;AN=2184 GT:DS:GL:BD 0.10119048 0
1 234354664 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0455;AVGPOST=0.9954;RSQ=0.9646;ERATE=0.0005;THETA=0.0002;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234354739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.835;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.8651;ERATE=0.0004;THETA=0.0047;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234354761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0111;AVGPOST=0.9995;RSQ=0.9764;ERATE=0.0003;THETA=0.0015;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234354856 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4826;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234354947 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234355151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4466;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234355231 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0238;AVGPOST=0.9999;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234355252 . C CAG 38 PASS INDEL;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4105;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234355453 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7217;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234355495 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0047;AVGPOST=0.9987;RSQ=0.8852;ERATE=0.0009;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234355535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.767;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6470;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234355574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9617;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234355696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234355697 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0032;AVGPOST=0.9998;RSQ=0.9731;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234355776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0240;AVGPOST=0.9995;RSQ=0.9902;ERATE=0.0003;THETA=0.0030;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234355780 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2948;AVGPOST=0.9992;RSQ=0.9989;ERATE=0.0003;THETA=0.0004;AC=645;AN=2184 GT:DS:GL:BD 0.29532966 0
1 234355795 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9436;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234355812 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7345;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234355830 . CAG C 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0015;AVGPOST=0.9987;RSQ=0.6748;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234355880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234355980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3201;AVGPOST=0.9993;RSQ=0.9990;ERATE=0.0004;THETA=0.0002;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 234356024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234356027 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7013;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234356043 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6608;ERATE=0.0010;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234356098 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.773;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234356108 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9186;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234356159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3197;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0001;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 234356229 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234356239 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5448;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234356313 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6518;AVGPOST=0.9984;RSQ=0.9977;ERATE=0.0004;THETA=0.0004;AC=1425;AN=2184 GT:DS:GL:BD 0.65247256 1
1 234356508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9985;RSQ=0.8811;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234356598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8498;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234356676 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.2133;AVGPOST=0.9955;RSQ=0.9907;ERATE=0.0004;THETA=0.0008;AC=462;AN=2184 GT:DS:GL:BD 0.21153846 0
1 234356784 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.927;LDAF=0.0132;AVGPOST=0.9971;RSQ=0.9228;ERATE=0.0005;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234356847 rs72337252 AAGAG A 63584 PASS INDEL;BAVGPOST=0.984;BRSQ=0.976;LDAF=0.3149;AVGPOST=0.9933;RSQ=0.9920;ERATE=0.0004;THETA=0.0007;AC=691;AN=2184 GT:DS:GL:BD 0.31639194 0
1 234356854 . AGAGT A 27556 PASS INDEL;BAVGPOST=0.970;BRSQ=0.952;LDAF=0.2984;AVGPOST=0.9745;RSQ=0.9673;ERATE=0.0005;THETA=0.0008;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234356861 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9751;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234356862 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234356924 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234356943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234356985 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7012;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234357138 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234357141 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234357301 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1446;AVGPOST=0.9961;RSQ=0.9890;ERATE=0.0005;THETA=0.0003;AC=314;AN=2184 GT:DS:GL:BD 0.14377290 0
1 234357439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0252;AVGPOST=0.9998;RSQ=0.9964;ERATE=0.0003;THETA=0.0003;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234357706 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0133;AVGPOST=0.9987;RSQ=0.9622;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234357708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234357733 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234357852 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0147;AVGPOST=0.9997;RSQ=0.9896;ERATE=0.0003;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234357921 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3319;AVGPOST=0.9991;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=726;AN=2184 GT:DS:GL:BD 0.33241758 0
1 234358107 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0070;AVGPOST=0.9997;RSQ=0.9782;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234358192 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8681;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234358196 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9531;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234358216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3161;AVGPOST=0.9988;RSQ=0.9984;ERATE=0.0005;THETA=0.0006;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 234358318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8622;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234358323 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6477;AVGPOST=0.9988;RSQ=0.9983;ERATE=0.0004;THETA=0.0004;AC=1416;AN=2184 GT:DS:GL:BD 0.64835167 1
1 234358663 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2865;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=626;AN=2184 GT:DS:GL:BD 0.28663003 0
1 234358666 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9439;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234358678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9989;RSQ=0.9354;ERATE=0.0004;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234358878 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234358894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0055;AVGPOST=0.9997;RSQ=0.9731;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234359056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0315;AVGPOST=0.9979;RSQ=0.9730;ERATE=0.0003;THETA=0.0006;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234359083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9778;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234359095 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234359151 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0024;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234359155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.677;LDAF=0.0030;AVGPOST=0.9970;RSQ=0.6006;ERATE=0.0010;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234359232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0263;AVGPOST=0.9989;RSQ=0.9857;ERATE=0.0003;THETA=0.0007;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234359247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9642;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234359399 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234359441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.956;LDAF=0.0092;AVGPOST=0.9984;RSQ=0.9342;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234359446 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.987;LDAF=0.0234;AVGPOST=0.9987;RSQ=0.9809;ERATE=0.0003;THETA=0.0004;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234359502 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234359563 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5425;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234359647 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234359703 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234359724 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234359725 . CTCT C 1080 PASS INDEL;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0064;AVGPOST=0.9988;RSQ=0.9375;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234359849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8134;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234359910 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.6018;AVGPOST=0.9943;RSQ=0.9933;ERATE=0.0005;THETA=0.0004;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 234359961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3248;AVGPOST=0.9973;RSQ=0.9967;ERATE=0.0003;THETA=0.0003;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 234359995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0027;AVGPOST=0.9980;RSQ=0.6880;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234360064 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=1.000;LDAF=0.2628;AVGPOST=0.9975;RSQ=0.9967;ERATE=0.0003;THETA=0.0020;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 234360093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.809;LDAF=0.0067;AVGPOST=0.9970;RSQ=0.8230;ERATE=0.0004;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234360206 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9734;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234360238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0113;AVGPOST=0.9995;RSQ=0.9861;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234360303 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234360376 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9101;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234360406 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234360439 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9863;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234360497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8611;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234360508 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9430;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234360600 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9167;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234360684 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8842;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234360776 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8234;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234360785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7052;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234360858 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0236;AVGPOST=0.9994;RSQ=0.9920;ERATE=0.0003;THETA=0.0003;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234360900 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234361159 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0782;AVGPOST=0.9994;RSQ=0.9968;ERATE=0.0003;THETA=0.0005;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 234361185 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0070;AVGPOST=0.9983;RSQ=0.9044;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234361195 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.932;LDAF=0.0096;AVGPOST=0.9988;RSQ=0.9484;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234361318 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234361365 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3327;AVGPOST=0.9994;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=728;AN=2184 GT:DS:GL:BD 0.33333334 0
1 234361490 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234361527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0032;AVGPOST=0.9997;RSQ=0.9532;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234361568 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6865;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234361573 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9994;RSQ=0.9324;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234361727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0128;AVGPOST=0.9991;RSQ=0.9696;ERATE=0.0006;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234361805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.907;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9527;ERATE=0.0006;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234361818 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6351;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234362037 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.995;LDAF=0.5991;AVGPOST=0.9978;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 234362149 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234362198 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0028;AVGPOST=0.9981;RSQ=0.7307;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234362237 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234362369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234362441 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6468;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234362573 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234362692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.820;LDAF=0.0160;AVGPOST=0.9897;RSQ=0.7567;ERATE=0.0020;THETA=0.0001;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234362782 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2641;AVGPOST=0.9992;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=577;AN=2184 GT:DS:GL:BD 0.26419413 0
1 234362784 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234362838 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234362872 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6909;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234362889 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234362972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3230;AVGPOST=0.9995;RSQ=0.9992;ERATE=0.0003;THETA=0.0003;AC=707;AN=2184 GT:DS:GL:BD 0.32371795 0
1 234363077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7195;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234363080 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5449;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234363205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.708;LDAF=0.0013;AVGPOST=0.9979;RSQ=0.3434;ERATE=0.0005;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234363294 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.974;LDAF=0.3201;AVGPOST=0.9761;RSQ=0.9681;ERATE=0.0032;THETA=0.0005;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 234363299 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.871;LDAF=0.0187;AVGPOST=0.9932;RSQ=0.8510;ERATE=0.0006;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234363302 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.624;LDAF=0.0052;AVGPOST=0.9950;RSQ=0.6079;ERATE=0.0011;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234363318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8494;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234363348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0263;AVGPOST=0.9972;RSQ=0.9510;ERATE=0.0005;THETA=0.0005;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234363391 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.919;BRSQ=0.887;LDAF=0.5685;AVGPOST=0.9442;RSQ=0.9309;ERATE=0.0018;THETA=0.0007;AC=1275;AN=2184 GT:DS:GL:BD 0.58379120 1
1 234363432 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0131;AVGPOST=0.9960;RSQ=0.8728;ERATE=0.0006;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234363592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6159;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234363967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8664;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234364047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2509;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0004;THETA=0.0002;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 234364208 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0137;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234364266 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234364285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2984;AVGPOST=0.9989;RSQ=0.9984;ERATE=0.0003;THETA=0.0003;AC=653;AN=2184 GT:DS:GL:BD 0.29899266 0
1 234364287 . GTC G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5617;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234364331 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.961;LDAF=0.1735;AVGPOST=0.9866;RSQ=0.9689;ERATE=0.0004;THETA=0.0025;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 234364335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2473;AVGPOST=0.9978;RSQ=0.9966;ERATE=0.0005;THETA=0.0041;AC=541;AN=2184 GT:DS:GL:BD 0.24771062 0
1 234364364 . TAA T 255 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234364417 . AGT A 145 PASS INDEL;BAVGPOST=0.987;BRSQ=0.629;LDAF=0.0248;AVGPOST=0.9738;RSQ=0.5669;ERATE=0.0099;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234364534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0026;AVGPOST=0.9978;RSQ=0.6554;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234364564 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0780;AVGPOST=0.9970;RSQ=0.9852;ERATE=0.0004;THETA=0.0035;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234364572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.886;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0048;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234364631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9649;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234364702 . GATT G 105 PASS INDEL;BAVGPOST=0.995;BRSQ=0.725;LDAF=0.0098;AVGPOST=0.9906;RSQ=0.6018;ERATE=0.0022;THETA=0.0009;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234364843 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234364880 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0052;AVGPOST=0.9976;RSQ=0.7958;ERATE=0.0005;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234364896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=0.9995;RSQ=0.8970;ERATE=0.0003;THETA=0.0017;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234365007 rs35284802 A AT 50720 PASS INDEL;BAVGPOST=0.993;BRSQ=0.993;LDAF=0.2995;AVGPOST=0.9941;RSQ=0.9921;ERATE=0.0006;THETA=0.0029;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234365051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234365081 rs10711310 AT A 24378 PASS INDEL;BAVGPOST=0.987;BRSQ=0.980;LDAF=0.2293;AVGPOST=0.9870;RSQ=0.9810;ERATE=0.0004;THETA=0.0015;AC=499;AN=2184 GT:DS:GL:BD 0.22847985 0
1 234365086 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3494;AVGPOST=0.9931;RSQ=0.9909;ERATE=0.0004;THETA=0.0428;AC=764;AN=2184 GT:DS:GL:BD 0.34981686 0
1 234365089 . TG T 195 PASS INDEL;BAVGPOST=0.970;BRSQ=0.442;LDAF=0.0240;AVGPOST=0.9756;RSQ=0.6222;ERATE=0.0005;THETA=0.0097;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234365487 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0181;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234365555 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0006;THETA=0.0090;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234365646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7407;ERATE=0.0003;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234365676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7588;ERATE=0.0003;THETA=0.0160;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234365694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7784;ERATE=0.0003;THETA=0.0088;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234365714 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8276;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234365748 . GA G 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5855;ERATE=0.0004;THETA=0.0064;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234365902 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0168;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234365927 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0165;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234366004 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7217;ERATE=0.0003;THETA=0.0173;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234366112 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0119;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234366139 . ATC A 438 PASS INDEL;BAVGPOST=0.996;BRSQ=0.937;LDAF=0.0242;AVGPOST=0.9940;RSQ=0.9197;ERATE=0.0004;THETA=0.0046;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234366140 . TCTC T 6797 PASS INDEL;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0256;AVGPOST=0.9947;RSQ=0.9349;ERATE=0.0004;THETA=0.0172;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234366146 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.953;LDAF=0.0132;AVGPOST=0.9982;RSQ=0.9520;ERATE=0.0004;THETA=0.0108;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234366524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0276;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234366548 . T TA 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.593;LDAF=0.0014;AVGPOST=0.9987;RSQ=0.5839;ERATE=0.0004;THETA=0.0105;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234366574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7392;ERATE=0.0003;THETA=0.0134;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234366670 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4508;ERATE=0.0005;THETA=0.0122;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234366798 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7702;ERATE=0.0003;THETA=0.0220;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234366802 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8241;ERATE=0.0003;THETA=0.0137;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234366863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6301;ERATE=0.0005;THETA=0.0187;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234366873 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9277;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234367106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.756;LDAF=0.0075;AVGPOST=0.9956;RSQ=0.7577;ERATE=0.0005;THETA=0.0076;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234367264 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0136;AVGPOST=0.9989;RSQ=0.9679;ERATE=0.0003;THETA=0.0128;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234367327 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9582;ERATE=0.0003;THETA=0.0134;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234367458 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0259;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234367473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0027;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0196;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234367549 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.978;LDAF=0.4109;AVGPOST=0.9851;RSQ=0.9768;ERATE=0.0011;THETA=0.0163;AC=893;AN=2184 GT:DS:GL:BD 0.40888280 0
1 234367564 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0107;AVGPOST=0.9987;RSQ=0.9517;ERATE=0.0005;THETA=0.0026;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234367599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0040;AVGPOST=0.9987;RSQ=0.9000;ERATE=0.0003;THETA=0.0067;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234367707 . T TG 321 PASS INDEL;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4407;ERATE=0.0005;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234367917 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9512;ERATE=0.0003;THETA=0.0037;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234367949 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.987;LDAF=0.3710;AVGPOST=0.9902;RSQ=0.9843;ERATE=0.0006;THETA=0.0013;AC=809;AN=2184 GT:DS:GL:BD 0.37042123 0
1 234368062 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6426;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234368094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5511;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234368173 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7315;ERATE=0.0005;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234368265 rs72212005 C CA 2538 PASS INDEL;BAVGPOST=0.645;BRSQ=0.378;LDAF=0.6168;AVGPOST=0.7323;RSQ=0.5760;ERATE=0.0126;THETA=0.0026;AC=1357;AN=2184 GT:DS:GL:BD 0.62133700 1
1 234368276 . A AAG 125 PASS INDEL;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0039;AVGPOST=0.9938;RSQ=0.3060;ERATE=0.0010;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234368277 . A AG 28 PASS INDEL;BAVGPOST=0.994;BRSQ=0.566;LDAF=0.0069;AVGPOST=0.9935;RSQ=0.6381;ERATE=0.0005;THETA=0.0033;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234368338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.958;LDAF=0.0130;AVGPOST=0.9986;RSQ=0.9598;ERATE=0.0003;THETA=0.0064;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234368430 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9460;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234368456 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.576;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6332;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234368468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7811;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234368559 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.6035;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234368625 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8271;ERATE=0.0004;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234368671 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.951;LDAF=0.0366;AVGPOST=0.9947;RSQ=0.9459;ERATE=0.0003;THETA=0.0015;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234368865 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.6183;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234368958 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8154;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234368995 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8840;ERATE=0.0003;THETA=0.0028;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234369031 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0004;AVGPOST=0.9995;RSQ=0.5285;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234369180 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.945;LDAF=0.0234;AVGPOST=0.9971;RSQ=0.9576;ERATE=0.0005;THETA=0.0019;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234369247 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5756;ERATE=0.0005;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234369318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.7354;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234369331 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9410;ERATE=0.0003;THETA=0.0010;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234369364 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7635;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234369381 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9615;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234369587 rs111517884 GTTGTT G 2612 PASS INDEL;BAVGPOST=0.988;BRSQ=0.778;LDAF=0.0259;AVGPOST=0.9880;RSQ=0.8047;ERATE=0.0006;THETA=0.0005;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234369901 . CAGAG C 393 PASS INDEL;BAVGPOST=0.999;BRSQ=0.769;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7568;ERATE=0.0004;THETA=0.0035;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234369911 . A AT 606 PASS INDEL;BAVGPOST=0.998;BRSQ=0.925;LDAF=0.0074;AVGPOST=0.9957;RSQ=0.7818;ERATE=0.0005;THETA=0.0060;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234369982 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6112;ERATE=0.0004;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234370099 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3660;AVGPOST=0.9932;RSQ=0.9900;ERATE=0.0005;THETA=0.0034;AC=796;AN=2184 GT:DS:GL:BD 0.36446887 0
1 234370224 . GTCTGAGTGGA G 2669 PASS INDEL;BAVGPOST=0.998;BRSQ=0.911;LDAF=0.0141;AVGPOST=0.9980;RSQ=0.9424;ERATE=0.0003;THETA=0.0021;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234370259 . AC A 998 PASS INDEL;BAVGPOST=0.999;BRSQ=0.901;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9284;ERATE=0.0004;THETA=0.0028;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234370488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234370605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0032;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234370606 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234370626 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7868;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234370653 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3699;AVGPOST=0.9973;RSQ=0.9957;ERATE=0.0004;THETA=0.0004;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 234370753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6666;ERATE=0.0003;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234370758 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.982;LDAF=0.0737;AVGPOST=0.9961;RSQ=0.9793;ERATE=0.0004;THETA=0.0006;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234370772 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7912;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234370853 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234370879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.6267;AVGPOST=0.9968;RSQ=0.9960;ERATE=0.0004;THETA=0.0019;AC=1367;AN=2184 GT:DS:GL:BD 0.62591577 1
1 234371001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234371027 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234371039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9346;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234371054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234371111 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8027;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234371138 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.5192;AVGPOST=0.9931;RSQ=0.9903;ERATE=0.0006;THETA=0.0009;AC=1133;AN=2184 GT:DS:GL:BD 0.51877290 1
1 234371301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9443;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234371305 . CA C 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5195;ERATE=0.0004;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234371368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234371373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5490;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234371407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6254;AVGPOST=0.9980;RSQ=0.9971;ERATE=0.0004;THETA=0.0050;AC=1364;AN=2184 GT:DS:GL:BD 0.62454212 1
1 234371427 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5640;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234371506 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234371523 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3968;AVGPOST=0.9967;RSQ=0.9947;ERATE=0.0003;THETA=0.0002;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 234371585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234371586 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8770;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234371640 . T TG 912 PASS INDEL;BAVGPOST=0.999;BRSQ=0.943;LDAF=0.0086;AVGPOST=0.9957;RSQ=0.8010;ERATE=0.0004;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234371654 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234371695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0293;AVGPOST=0.9998;RSQ=0.9963;ERATE=0.0003;THETA=0.0004;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234371725 . C CGTCT 420 PASS INDEL;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0016;AVGPOST=0.9976;RSQ=0.4579;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234371726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234371805 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=0.9990;RSQ=0.9738;ERATE=0.0003;THETA=0.0025;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234371965 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9694;ERATE=0.0003;THETA=0.0004;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234372043 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234372100 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.0928;AVGPOST=0.9969;RSQ=0.9869;ERATE=0.0005;THETA=0.0004;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234372136 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0075;AVGPOST=0.9976;RSQ=0.8914;ERATE=0.0004;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234372170 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.8662;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234372216 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234372268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7130;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234372388 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234372393 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0045;AVGPOST=0.9980;RSQ=0.8194;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234372434 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9997;RSQ=0.0497;ERATE=0.0003;THETA=0.0006;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 234372660 rs56380841 TA T 7445 PASS INDEL;BAVGPOST=0.953;BRSQ=0.911;LDAF=0.4053;AVGPOST=0.8956;RSQ=0.8396;ERATE=0.0071;THETA=0.0004;AC=851;AN=2184 GT:DS:GL:BD 0.38965201 0
1 234372683 rs59786849 A AAAAAAAAT 192 PASS INDEL;BAVGPOST=0.941;BRSQ=0.201;LDAF=0.0811;AVGPOST=0.8962;RSQ=0.4342;ERATE=0.0066;THETA=0.0004;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 234372686 rs59786849 TA T 42 PASS INDEL;BAVGPOST=0.974;BRSQ=0.122;LDAF=0.0662;AVGPOST=0.8866;RSQ=0.2555;ERATE=0.0070;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234372695 . ATATATATATATATATG A 1595 PASS INDEL;BAVGPOST=0.906;BRSQ=0.320;LDAF=0.1005;AVGPOST=0.8889;RSQ=0.5103;ERATE=0.0088;THETA=0.0007;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 234372771 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.813;LDAF=0.0130;AVGPOST=0.9932;RSQ=0.7843;ERATE=0.0005;THETA=0.0008;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234372782 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0177;AVGPOST=0.9918;RSQ=0.8159;ERATE=0.0005;THETA=0.0004;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234372849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.621;LDAF=0.0019;AVGPOST=0.9971;RSQ=0.3366;ERATE=0.0005;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234372852 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.658;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5601;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234372870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.798;LDAF=0.0029;AVGPOST=0.9978;RSQ=0.7034;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234372994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0162;AVGPOST=0.9979;RSQ=0.9528;ERATE=0.0010;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234373113 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5632;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234373138 . AT A 524 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9741;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234373245 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.960;LDAF=0.0067;AVGPOST=0.9988;RSQ=0.9311;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234373318 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0888;AVGPOST=0.9983;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 234373328 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0887;AVGPOST=0.9984;RSQ=0.9923;ERATE=0.0003;THETA=0.0009;AC=194;AN=2184 GT:DS:GL:BD 0.08882784 0
1 234373383 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0037;AVGPOST=0.9982;RSQ=0.8321;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234373631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234373687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6632;ERATE=0.0004;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234373694 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8686;ERATE=0.0003;THETA=0.0039;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234373840 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0348;AVGPOST=0.9987;RSQ=0.9855;ERATE=0.0003;THETA=0.0027;AC=77;AN=2184 GT:DS:GL:BD 0.03525641 0
1 234373842 . GT G 27 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234373972 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3912;AVGPOST=0.9950;RSQ=0.9919;ERATE=0.0007;THETA=0.0002;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 234374043 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0122;AVGPOST=0.9993;RSQ=0.9793;ERATE=0.0004;THETA=0.0006;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234374109 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9344;ERATE=0.0003;THETA=0.0040;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234374186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234374261 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234374365 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0029;AVGPOST=0.9969;RSQ=0.6699;ERATE=0.0004;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234374395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0161;AVGPOST=0.9995;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234374541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7422;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234374682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.3253;AVGPOST=0.9881;RSQ=0.9813;ERATE=0.0009;THETA=0.0015;AC=708;AN=2184 GT:DS:GL:BD 0.32417583 0
1 234374705 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0747;AVGPOST=0.9983;RSQ=0.9900;ERATE=0.0004;THETA=0.0008;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 234374755 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.6168;AVGPOST=0.9942;RSQ=0.9924;ERATE=0.0007;THETA=0.0003;AC=1347;AN=2184 GT:DS:GL:BD 0.61675823 1
1 234374963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0022;AVGPOST=0.9991;RSQ=0.8410;ERATE=0.0003;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234375007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234375008 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234375020 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5779;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234375039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9448;ERATE=0.0003;THETA=0.0011;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234375115 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234375116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234375287 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0073;AVGPOST=0.9993;RSQ=0.9600;ERATE=0.0003;THETA=0.0013;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234375366 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8634;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234375369 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7162;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234375457 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0056;AVGPOST=0.9997;RSQ=0.9770;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234375561 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6078;ERATE=0.0006;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234375581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234375637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7608;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234375657 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234375669 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234375737 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.716;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5547;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234375867 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4955;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234376037 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.557;LDAF=0.0044;AVGPOST=0.9949;RSQ=0.5842;ERATE=0.0006;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234376077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.653;LDAF=0.0045;AVGPOST=0.9953;RSQ=0.5979;ERATE=0.0010;THETA=0.0022;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234376113 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.855;LDAF=0.0099;AVGPOST=0.9965;RSQ=0.8731;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234376156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0197;AVGPOST=0.9990;RSQ=0.9775;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234376332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0057;AVGPOST=0.9967;RSQ=0.7850;ERATE=0.0004;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234376350 . GA G 65 PASS INDEL;BAVGPOST=0.953;BRSQ=0.428;LDAF=0.0597;AVGPOST=0.9229;RSQ=0.4395;ERATE=0.0201;THETA=0.0013;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 234376372 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0031;AVGPOST=0.9990;RSQ=0.8659;ERATE=0.0005;THETA=0.0013;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234376422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0313;AVGPOST=0.9988;RSQ=0.9866;ERATE=0.0004;THETA=0.0008;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 234376424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234376615 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7527;ERATE=0.0005;THETA=0.0046;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234376618 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234376802 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234376947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0005;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234377002 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9589;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234377041 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234377211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234377285 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.763;LDAF=0.0048;AVGPOST=0.9963;RSQ=0.7035;ERATE=0.0006;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234377338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234377350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.926;LDAF=0.8189;AVGPOST=0.9559;RSQ=0.8918;ERATE=0.0061;THETA=0.0003;AC=1812;AN=2184 GT:DS:GL:BD 0.82967031 1
1 234377405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234377674 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7333;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234377708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0031;AVGPOST=0.9994;RSQ=0.9152;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234377737 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6724;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234377850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234378017 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234378020 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.5843;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234378055 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0045;AVGPOST=0.9975;RSQ=0.7936;ERATE=0.0006;THETA=0.0008;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234378082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9340;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234378150 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9535;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234378299 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0216;AVGPOST=0.9972;RSQ=0.9474;ERATE=0.0003;THETA=0.0008;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234378326 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.845;LDAF=0.0036;AVGPOST=0.9984;RSQ=0.8413;ERATE=0.0003;THETA=0.0039;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234378363 . A AT 2646 PASS INDEL;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0167;AVGPOST=0.9989;RSQ=0.9738;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234378395 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0044;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234378468 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8431;ERATE=0.0003;THETA=0.0019;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234378606 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234378643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234378673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0075;AVGPOST=0.9997;RSQ=0.9800;ERATE=0.0003;THETA=0.0008;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234378705 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0456;AVGPOST=0.9974;RSQ=0.9762;ERATE=0.0003;THETA=0.0005;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234378775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6330;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234378821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0086;AVGPOST=0.9991;RSQ=0.9583;ERATE=0.0003;THETA=0.0008;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234379054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.722;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4147;ERATE=0.0006;THETA=0.0042;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234379073 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0730;AVGPOST=0.9986;RSQ=0.9910;ERATE=0.0003;THETA=0.0005;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234379088 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.927;LDAF=0.0044;AVGPOST=0.9984;RSQ=0.8315;ERATE=0.0004;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234379093 . C CA 137 PASS INDEL;BAVGPOST=0.986;BRSQ=0.552;LDAF=0.0249;AVGPOST=0.9697;RSQ=0.5055;ERATE=0.0099;THETA=0.0053;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234379253 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0073;AVGPOST=0.9989;RSQ=0.9342;ERATE=0.0003;THETA=0.0008;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234379291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0058;AVGPOST=0.9973;RSQ=0.8123;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234379335 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8815;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234379337 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9469;ERATE=0.0003;THETA=0.0012;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234379661 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6422;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234379667 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234379738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234379854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0731;AVGPOST=0.9991;RSQ=0.9942;ERATE=0.0004;THETA=0.0004;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234379913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2310;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0003;THETA=0.0005;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 234379928 . T TGG 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234379946 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234379947 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234379968 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8553;ERATE=0.0004;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234379969 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7054;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234379992 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3955;AVGPOST=0.9957;RSQ=0.9928;ERATE=0.0010;THETA=0.0007;AC=864;AN=2184 GT:DS:GL:BD 0.39560440 0
1 234380141 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6602;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234380324 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234380364 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0166;AVGPOST=0.9992;RSQ=0.9812;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234380427 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0045;AVGPOST=0.9992;RSQ=0.9183;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234380479 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234380517 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4093;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0006;THETA=0.0003;AC=894;AN=2184 GT:DS:GL:BD 0.40934065 0
1 234380529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9865;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234380552 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0737;AVGPOST=0.9986;RSQ=0.9913;ERATE=0.0003;THETA=0.0003;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234380576 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.827;LDAF=0.0006;AVGPOST=0.9989;RSQ=0.2732;ERATE=0.0005;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234380619 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2309;AVGPOST=0.9984;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 234380678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9871;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234380722 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0131;AVGPOST=0.9990;RSQ=0.9708;ERATE=0.0003;THETA=0.0006;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234381070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234381152 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0144;AVGPOST=0.9985;RSQ=0.9521;ERATE=0.0003;THETA=0.0015;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234381205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9827;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234381310 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234381365 rs57446896 CT C 54278 PASS INDEL;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3250;AVGPOST=0.9957;RSQ=0.9945;ERATE=0.0008;THETA=0.0008;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 234381513 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3371;AVGPOST=0.9984;RSQ=0.9978;ERATE=0.0004;THETA=0.0005;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 234381544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0075;AVGPOST=0.9988;RSQ=0.9326;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234381546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.7122;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234381557 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234381558 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0731;AVGPOST=0.9999;RSQ=0.9991;ERATE=0.0003;THETA=0.0002;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234381570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234381610 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0160;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234381711 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.986;LDAF=0.8124;AVGPOST=0.9971;RSQ=0.9925;ERATE=0.0003;THETA=0.0002;AC=1775;AN=2184 GT:DS:GL:BD 0.81272894 1
1 234381719 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.897;LDAF=0.0233;AVGPOST=0.9950;RSQ=0.9150;ERATE=0.0004;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234381774 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234381919 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234381998 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234382132 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8413;AVGPOST=0.9995;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=1837;AN=2184 GT:DS:GL:BD 0.84111720 1
1 234382263 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.636;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5268;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234382265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.959;LDAF=0.0128;AVGPOST=0.9995;RSQ=0.9826;ERATE=0.0004;THETA=0.0002;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234382284 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0099;AVGPOST=0.9985;RSQ=0.9463;ERATE=0.0003;THETA=0.0007;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234382316 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0046;AVGPOST=0.9993;RSQ=0.9405;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234382342 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9999;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234382377 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.950;LDAF=0.1375;AVGPOST=0.9870;RSQ=0.9567;ERATE=0.0007;THETA=0.0002;AC=293;AN=2184 GT:DS:GL:BD 0.13415751 0
1 234382412 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2316;AVGPOST=0.9991;RSQ=0.9988;ERATE=0.0003;THETA=0.0004;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 234382419 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234382468 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=0.9998;RSQ=0.9867;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234382487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0187;AVGPOST=0.9995;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234382599 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2345;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0003;AC=513;AN=2184 GT:DS:GL:BD 0.23489010 0
1 234382652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234382721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0039;AVGPOST=0.9996;RSQ=0.9705;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234382846 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8290;AVGPOST=0.9987;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=1809;AN=2184 GT:DS:GL:BD 0.82829672 1
1 234382996 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0059;AVGPOST=0.9991;RSQ=0.9412;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234383005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234383043 . TG T 47 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6318;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234383046 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9643;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234383101 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7601;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234383308 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.3280;AVGPOST=0.9719;RSQ=0.9601;ERATE=0.0142;THETA=0.0004;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 234383560 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.8360;AVGPOST=0.9965;RSQ=0.9900;ERATE=0.0008;THETA=0.0001;AC=1828;AN=2184 GT:DS:GL:BD 0.83699632 1
1 234383988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.957;LDAF=0.0102;AVGPOST=0.9977;RSQ=0.9156;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234384120 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.965;BRSQ=0.691;LDAF=0.0603;AVGPOST=0.9520;RSQ=0.6721;ERATE=0.0155;THETA=0.0002;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 234384380 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9516;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234384439 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7882;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234384546 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8249;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=1801;AN=2184 GT:DS:GL:BD 0.82463372 1
1 234384589 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0087;AVGPOST=0.9999;RSQ=0.9954;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234384658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2315;AVGPOST=0.9990;RSQ=0.9984;ERATE=0.0003;THETA=0.0002;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 234384674 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8244;AVGPOST=0.9991;RSQ=0.9973;ERATE=0.0004;THETA=0.0001;AC=1800;AN=2184 GT:DS:GL:BD 0.82417583 1
1 234384685 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0088;AVGPOST=0.9995;RSQ=0.9774;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234384737 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8332;AVGPOST=0.9990;RSQ=0.9969;ERATE=0.0005;THETA=0.0004;AC=1820;AN=2184 GT:DS:GL:BD 0.83333331 1
1 234384853 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8410;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234384933 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0017;AVGPOST=0.9978;RSQ=0.5349;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234385038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6884;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234385042 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9893;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234385050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4967;AVGPOST=0.9980;RSQ=0.9974;ERATE=0.0006;THETA=0.0004;AC=1084;AN=2184 GT:DS:GL:BD 0.49633700 0
1 234385072 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234385124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9411;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234385247 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.806;LDAF=0.0057;AVGPOST=0.9967;RSQ=0.7643;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234385283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.6054;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234385444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.8354;AVGPOST=0.9980;RSQ=0.9945;ERATE=0.0004;THETA=0.0003;AC=1825;AN=2184 GT:DS:GL:BD 0.83562273 1
1 234385611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.7207;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234385679 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0733;AVGPOST=0.9997;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234385769 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0019;AVGPOST=0.9994;RSQ=0.8624;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234385941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0089;AVGPOST=0.9989;RSQ=0.9543;ERATE=0.0003;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234385967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7784;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234386125 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0085;AVGPOST=0.9995;RSQ=0.9755;ERATE=0.0003;THETA=0.0037;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234386267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.974;LDAF=0.8208;AVGPOST=0.9832;RSQ=0.9559;ERATE=0.0016;THETA=0.0001;AC=1797;AN=2184 GT:DS:GL:BD 0.82280219 1
1 234386351 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.974;LDAF=0.4886;AVGPOST=0.9748;RSQ=0.9665;ERATE=0.0013;THETA=0.0004;AC=1076;AN=2184 GT:DS:GL:BD 0.49267399 0
1 234386513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9997;RSQ=0.0640;ERATE=0.0003;THETA=0.0002;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 234386638 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0827;AVGPOST=0.9984;RSQ=0.9932;ERATE=0.0004;THETA=0.0005;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 234386647 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7236;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234386798 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234386850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234386906 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0039;AVGPOST=0.9984;RSQ=0.8405;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234386907 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2313;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0008;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 234386959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2323;AVGPOST=0.9988;RSQ=0.9982;ERATE=0.0004;THETA=0.0002;AC=509;AN=2184 GT:DS:GL:BD 0.23305860 0
1 234386997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8538;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234387078 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8977;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234387106 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.960;LDAF=0.0125;AVGPOST=0.9984;RSQ=0.9502;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234387120 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0089;AVGPOST=0.9995;RSQ=0.9778;ERATE=0.0003;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234387130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9323;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234387136 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8623;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234387178 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234387193 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.748;LDAF=0.0071;AVGPOST=0.9963;RSQ=0.7737;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234387226 . AAC A 11741 PASS INDEL;BAVGPOST=0.956;BRSQ=0.916;LDAF=0.2502;AVGPOST=0.9319;RSQ=0.8882;ERATE=0.0114;THETA=0.0003;AC=531;AN=2184 GT:DS:GL:BD 0.24313186 0
1 234387274 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5678;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234387456 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.7450;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234387471 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234387510 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0096;AVGPOST=0.9985;RSQ=0.9398;ERATE=0.0003;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234387647 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.8051;AVGPOST=0.9936;RSQ=0.9853;ERATE=0.0006;THETA=0.0003;AC=1759;AN=2184 GT:DS:GL:BD 0.80540293 1
1 234387758 . GA G 462 PASS INDEL;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0042;AVGPOST=0.9971;RSQ=0.7198;ERATE=0.0008;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234387793 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234387972 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.725;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4832;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234388004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.596;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5611;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234388005 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.562;LDAF=0.0024;AVGPOST=0.9965;RSQ=0.3942;ERATE=0.0009;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234388131 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.7962;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234388205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.8363;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=1826;AN=2184 GT:DS:GL:BD 0.83608061 1
1 234388227 . G GA 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6428;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234388235 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0042;AVGPOST=0.9990;RSQ=0.9091;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234388243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.807;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234388304 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3910;AVGPOST=0.9910;RSQ=0.9854;ERATE=0.0027;THETA=0.0027;AC=853;AN=2184 GT:DS:GL:BD 0.39056778 0
1 234388404 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6911;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234388409 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234388418 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.8974;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234388438 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.7953;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234388453 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.8258;AVGPOST=0.9978;RSQ=0.9935;ERATE=0.0007;THETA=0.0005;AC=1804;AN=2184 GT:DS:GL:BD 0.82600731 1
1 234388524 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8416;ERATE=0.0008;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234388658 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234388682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7718;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234388717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8131;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234388947 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7908;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234388995 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0062;AVGPOST=0.9985;RSQ=0.9001;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234388996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.425;LDAF=0.0027;AVGPOST=0.9969;RSQ=0.5458;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234388997 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.921;LDAF=0.0186;AVGPOST=0.9936;RSQ=0.8690;ERATE=0.0005;THETA=0.0014;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234389029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0066;AVGPOST=0.9974;RSQ=0.8628;ERATE=0.0005;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234389059 . C CA 103 PASS INDEL;BAVGPOST=0.999;BRSQ=0.682;LDAF=0.0026;AVGPOST=0.9991;RSQ=0.8322;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234389234 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8187;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234389363 . T TA 172 PASS INDEL;BAVGPOST=0.993;BRSQ=0.568;LDAF=0.0115;AVGPOST=0.9865;RSQ=0.5193;ERATE=0.0053;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234389380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.7029;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234389425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8260;AVGPOST=0.9987;RSQ=0.9961;ERATE=0.0005;THETA=0.0002;AC=1804;AN=2184 GT:DS:GL:BD 0.82600731 1
1 234389495 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0053;AVGPOST=0.9993;RSQ=0.9386;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234389540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234389574 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234389582 . A AT 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0041;AVGPOST=0.9956;RSQ=0.5646;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234389792 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234389825 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8976;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234389923 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5341;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234389970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0119;AVGPOST=0.9984;RSQ=0.9427;ERATE=0.0003;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234389972 . T TTA 243 PASS INDEL;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6366;ERATE=0.0013;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234389993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0037;AVGPOST=0.9993;RSQ=0.9164;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234389998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234389999 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6497;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234390062 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0101;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234390071 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234390172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.8217;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=1794;AN=2184 GT:DS:GL:BD 0.82142860 1
1 234390247 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0202;AVGPOST=0.9987;RSQ=0.9751;ERATE=0.0003;THETA=0.0005;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234390380 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6613;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234390453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234390467 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0089;AVGPOST=0.9996;RSQ=0.9820;ERATE=0.0003;THETA=0.0006;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234390475 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5935;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234390484 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.8362;AVGPOST=0.9987;RSQ=0.9958;ERATE=0.0005;THETA=0.0002;AC=1826;AN=2184 GT:DS:GL:BD 0.83608061 1
1 234390498 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234390571 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9125;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234390593 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234390749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7151;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234390803 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9994;RSQ=0.8040;ERATE=0.0009;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234390874 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7529;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234390877 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0041;AVGPOST=0.9991;RSQ=0.9014;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234390885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7082;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234390890 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.8364;AVGPOST=0.9993;RSQ=0.9976;ERATE=0.0004;THETA=0.0006;AC=1826;AN=2184 GT:DS:GL:BD 0.83608061 1
1 234391073 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0744;AVGPOST=0.9989;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 234391258 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8495;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234391269 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7601;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234391302 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.8363;AVGPOST=0.9981;RSQ=0.9940;ERATE=0.0005;THETA=0.0002;AC=1826;AN=2184 GT:DS:GL:BD 0.83608061 1
1 234391322 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.852;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7665;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234391366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8860;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234391440 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8966;ERATE=0.0004;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234391454 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.8058;AVGPOST=0.9973;RSQ=0.9934;ERATE=0.0003;THETA=0.0003;AC=1760;AN=2184 GT:DS:GL:BD 0.80586082 1
1 234391530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0029;AVGPOST=0.9989;RSQ=0.8276;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234391545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0078;AVGPOST=0.9979;RSQ=0.8909;ERATE=0.0003;THETA=0.0019;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234391559 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9766;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234391614 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.860;LDAF=0.0153;AVGPOST=0.9941;RSQ=0.8496;ERATE=0.0004;THETA=0.0002;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234391738 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.868;LDAF=0.0316;AVGPOST=0.9915;RSQ=0.9043;ERATE=0.0004;THETA=0.0002;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234391739 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.5106;AVGPOST=0.9965;RSQ=0.9950;ERATE=0.0009;THETA=0.0004;AC=1114;AN=2184 GT:DS:GL:BD 0.51007324 1
1 234391775 . GGGA G 206 PASS INDEL;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0025;AVGPOST=0.9969;RSQ=0.5599;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234392040 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3314;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0005;THETA=0.0003;AC=723;AN=2184 GT:DS:GL:BD 0.33104396 0
1 234392067 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9360;ERATE=0.0003;THETA=0.0028;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234392072 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7305;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234392079 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.910;LDAF=0.0194;AVGPOST=0.9968;RSQ=0.9401;ERATE=0.0003;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234392159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9550;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234392236 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4834;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234392306 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8125;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234392341 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6944;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234392400 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7651;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234392428 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234392541 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3233;AVGPOST=0.9987;RSQ=0.9982;ERATE=0.0004;THETA=0.0007;AC=706;AN=2184 GT:DS:GL:BD 0.32326007 0
1 234392585 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0029;AVGPOST=0.9997;RSQ=0.9640;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234392643 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234392644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234392671 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0687;AVGPOST=0.9976;RSQ=0.9867;ERATE=0.0004;THETA=0.0002;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 234392804 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3958;AVGPOST=0.9943;RSQ=0.9922;ERATE=0.0008;THETA=0.0004;AC=865;AN=2184 GT:DS:GL:BD 0.39606228 0
1 234392861 . G GA 190 PASS INDEL;BAVGPOST=0.999;BRSQ=0.783;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7275;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234392906 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0027;AVGPOST=0.9999;RSQ=0.9781;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234392916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0035;AVGPOST=0.9992;RSQ=0.8973;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234393060 . TA T 283 PASS INDEL;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7531;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234393101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234393122 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234393176 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.0815;AVGPOST=0.9980;RSQ=0.9903;ERATE=0.0003;THETA=0.0004;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 234393189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4053;AVGPOST=0.9973;RSQ=0.9964;ERATE=0.0003;THETA=0.0007;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 234393208 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4105;AVGPOST=0.9934;RSQ=0.9913;ERATE=0.0028;THETA=0.0006;AC=896;AN=2184 GT:DS:GL:BD 0.41025642 0
1 234393468 . A AT 154 PASS INDEL;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0266;AVGPOST=0.9971;RSQ=0.9512;ERATE=0.0004;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234393472 rs113427800 T TA 4740 PASS INDEL;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0267;AVGPOST=0.9973;RSQ=0.9556;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234393527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.976;LDAF=0.0138;AVGPOST=0.9976;RSQ=0.9326;ERATE=0.0003;THETA=0.0006;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234393557 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234393668 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0079;AVGPOST=0.9982;RSQ=0.9160;ERATE=0.0003;THETA=0.0007;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234393743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.818;LDAF=0.0042;AVGPOST=0.9968;RSQ=0.7270;ERATE=0.0005;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234393877 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.4057;AVGPOST=0.9973;RSQ=0.9962;ERATE=0.0005;THETA=0.0014;AC=885;AN=2184 GT:DS:GL:BD 0.40521979 0
1 234393878 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7153;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234394014 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0838;AVGPOST=0.9979;RSQ=0.9886;ERATE=0.0011;THETA=0.0014;AC=182;AN=2184 GT:DS:GL:BD 0.08333334 0
1 234394051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5277;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234394059 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9860;ERATE=0.0003;THETA=0.0031;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234394100 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9449;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234394520 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7462;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234394854 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7924;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234395022 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.978;LDAF=0.3021;AVGPOST=0.9900;RSQ=0.9832;ERATE=0.0006;THETA=0.0004;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 234395024 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.8067;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234395075 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234395124 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9088;ERATE=0.0004;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234395171 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3091;AVGPOST=0.9928;RSQ=0.9898;ERATE=0.0005;THETA=0.0051;AC=674;AN=2184 GT:DS:GL:BD 0.30860806 0
1 234395174 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0692;AVGPOST=0.9956;RSQ=0.9759;ERATE=0.0004;THETA=0.0010;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234395229 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5826;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234395232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9858;ERATE=0.0003;THETA=0.0095;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234395313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.543;LDAF=0.0094;AVGPOST=0.9892;RSQ=0.5718;ERATE=0.0010;THETA=0.0007;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234395433 . GATA G 1283 PASS INDEL;BAVGPOST=0.989;BRSQ=0.788;LDAF=0.0330;AVGPOST=0.9707;RSQ=0.6333;ERATE=0.0067;THETA=0.0028;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234395694 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.8817;ERATE=0.0003;THETA=0.0029;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234395720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0004;THETA=0.0082;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234395756 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7350;ERATE=0.0007;THETA=0.0044;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234395781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0050;AVGPOST=0.9995;RSQ=0.9615;ERATE=0.0003;THETA=0.0047;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234395872 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8041;ERATE=0.0003;THETA=0.0060;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234395927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234395992 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.660;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6204;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234396040 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0050;AVGPOST=0.9992;RSQ=0.9365;ERATE=0.0003;THETA=0.0056;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234396066 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8344;ERATE=0.0003;THETA=0.0019;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234396095 . T TA 120 PASS INDEL;BAVGPOST=0.994;BRSQ=0.411;LDAF=0.0066;AVGPOST=0.9903;RSQ=0.4518;ERATE=0.0030;THETA=0.0033;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234396100 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5981;ERATE=0.0003;THETA=0.0092;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234396263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7863;ERATE=0.0003;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234396310 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234396311 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.692;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234396314 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.949;LDAF=0.0214;AVGPOST=0.9973;RSQ=0.9503;ERATE=0.0006;THETA=0.0027;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234396341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234396382 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234396420 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234396529 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.950;LDAF=0.0759;AVGPOST=0.9915;RSQ=0.9557;ERATE=0.0004;THETA=0.0030;AC=161;AN=2184 GT:DS:GL:BD 0.07371795 0
1 234396547 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234396556 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0154;AVGPOST=0.9984;RSQ=0.9694;ERATE=0.0003;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234396596 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0078;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234396703 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0157;AVGPOST=0.9979;RSQ=0.9606;ERATE=0.0003;THETA=0.0097;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234396895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8739;ERATE=0.0003;THETA=0.0168;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234396932 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6010;ERATE=0.0004;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234396990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0095;AVGPOST=0.9969;RSQ=0.8589;ERATE=0.0005;THETA=0.0071;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234396991 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.897;LDAF=0.5099;AVGPOST=0.9323;RSQ=0.9014;ERATE=0.0020;THETA=0.0060;AC=1112;AN=2184 GT:DS:GL:BD 0.50915754 1
1 234397000 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8734;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234397007 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.777;LDAF=0.0159;AVGPOST=0.9913;RSQ=0.7933;ERATE=0.0008;THETA=0.0162;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234397091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.814;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8579;ERATE=0.0003;THETA=0.0153;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234397130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0009;AVGPOST=0.9985;RSQ=0.4094;ERATE=0.0005;THETA=0.0087;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234397221 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0061;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234397314 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0054;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234397388 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.7634;ERATE=0.0009;THETA=0.0091;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234397593 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.668;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.4148;ERATE=0.0003;THETA=0.0195;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234397644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9185;ERATE=0.0003;THETA=0.0114;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234397672 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0075;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234397758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234397775 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6777;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234397986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8091;ERATE=0.0003;THETA=0.0091;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234398018 . C CACTG 436 PASS INDEL;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0028;AVGPOST=0.9971;RSQ=0.5793;ERATE=0.0006;THETA=0.0055;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234398051 . ATT A 245 PASS INDEL;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0242;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234398093 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0131;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234398115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8622;ERATE=0.0003;THETA=0.0043;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234398133 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.939;LDAF=0.0427;AVGPOST=0.9928;RSQ=0.9358;ERATE=0.0016;THETA=0.0219;AC=90;AN=2184 GT:DS:GL:BD 0.04120879 0
1 234398168 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7873;ERATE=0.0003;THETA=0.0147;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234398180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.926;LDAF=0.0246;AVGPOST=0.9962;RSQ=0.9416;ERATE=0.0004;THETA=0.0121;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234398182 . T TGCAG 1717 PASS INDEL;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0047;AVGPOST=0.9988;RSQ=0.9007;ERATE=0.0003;THETA=0.0098;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234398316 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.929;LDAF=0.2526;AVGPOST=0.9676;RSQ=0.9353;ERATE=0.0090;THETA=0.0101;AC=540;AN=2184 GT:DS:GL:BD 0.24725275 0
1 234398333 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0092;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234398414 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0111;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234398440 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.920;LDAF=0.0340;AVGPOST=0.9949;RSQ=0.9425;ERATE=0.0006;THETA=0.0222;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234398472 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0038;AVGPOST=0.9989;RSQ=0.8702;ERATE=0.0003;THETA=0.0117;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234398473 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5826;ERATE=0.0003;THETA=0.0134;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234398478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5754;ERATE=0.0004;THETA=0.0215;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234398577 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0148;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234398692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.946;LDAF=0.1069;AVGPOST=0.9878;RSQ=0.9521;ERATE=0.0006;THETA=0.0048;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 234398736 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7847;ERATE=0.0003;THETA=0.0090;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234398832 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234398880 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.954;LDAF=0.2954;AVGPOST=0.9686;RSQ=0.9461;ERATE=0.0074;THETA=0.0131;AC=636;AN=2184 GT:DS:GL:BD 0.29120880 0
1 234398923 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7923;ERATE=0.0004;THETA=0.0052;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234399010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0036;AVGPOST=0.9985;RSQ=0.8329;ERATE=0.0004;THETA=0.0125;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234399062 . C CT 543 PASS INDEL;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9013;ERATE=0.0003;THETA=0.0018;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234399098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.958;BRSQ=0.937;LDAF=0.4115;AVGPOST=0.9496;RSQ=0.9318;ERATE=0.0058;THETA=0.0160;AC=884;AN=2184 GT:DS:GL:BD 0.40476191 0
1 234399116 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.803;LDAF=0.0128;AVGPOST=0.9926;RSQ=0.7911;ERATE=0.0025;THETA=0.0090;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234399197 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.907;LDAF=0.0127;AVGPOST=0.9970;RSQ=0.9194;ERATE=0.0003;THETA=0.0136;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234399205 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0342;AVGPOST=0.9974;RSQ=0.9666;ERATE=0.0005;THETA=0.0010;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234399294 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0339;AVGPOST=0.9979;RSQ=0.9757;ERATE=0.0003;THETA=0.0031;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234399452 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.840;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7475;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234399521 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5853;ERATE=0.0010;THETA=0.0064;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234399579 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.2673;AVGPOST=0.9871;RSQ=0.9764;ERATE=0.0005;THETA=0.0019;AC=583;AN=2184 GT:DS:GL:BD 0.26694140 0
1 234399588 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.818;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7067;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234399621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.968;LDAF=0.0739;AVGPOST=0.9941;RSQ=0.9681;ERATE=0.0006;THETA=0.0007;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234399737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.669;LDAF=0.0056;AVGPOST=0.9952;RSQ=0.6477;ERATE=0.0007;THETA=0.0030;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234399846 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7551;ERATE=0.0003;THETA=0.0074;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234399944 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0725;AVGPOST=0.9972;RSQ=0.9868;ERATE=0.0004;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 234399998 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.7320;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234400012 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0025;AVGPOST=0.9991;RSQ=0.8458;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234400081 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9998;RSQ=0.8864;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234400185 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234400251 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234400254 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8446;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234400302 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1428;AVGPOST=0.9971;RSQ=0.9917;ERATE=0.0003;THETA=0.0018;AC=311;AN=2184 GT:DS:GL:BD 0.14239927 0
1 234400335 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234400358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3488;AVGPOST=0.9957;RSQ=0.9935;ERATE=0.0004;THETA=0.0006;AC=761;AN=2184 GT:DS:GL:BD 0.34844321 0
1 234400486 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1537;AVGPOST=0.9980;RSQ=0.9936;ERATE=0.0003;THETA=0.0030;AC=335;AN=2184 GT:DS:GL:BD 0.15338828 0
1 234400596 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6023;ERATE=0.0003;THETA=0.0017;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234400624 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9762;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234400722 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.711;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6796;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234400723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.954;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9533;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234400757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9221;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234400791 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.3507;AVGPOST=0.9957;RSQ=0.9935;ERATE=0.0004;THETA=0.0022;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234400884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.857;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234401045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8156;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234401092 rs71758816 G GT 37188 PASS INDEL;BAVGPOST=0.967;BRSQ=0.946;LDAF=0.4514;AVGPOST=0.9523;RSQ=0.9301;ERATE=0.0115;THETA=0.0024;AC=990;AN=2184 GT:DS:GL:BD 0.45329669 0
1 234401165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6392;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234401172 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.859;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.5189;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234401314 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0338;AVGPOST=0.9986;RSQ=0.9838;ERATE=0.0003;THETA=0.0008;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234401352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0047;AVGPOST=0.9989;RSQ=0.9111;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234401364 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7189;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234401397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0340;AVGPOST=0.9986;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=73;AN=2184 GT:DS:GL:BD 0.03342491 0
1 234401418 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0089;AVGPOST=0.9993;RSQ=0.9661;ERATE=0.0003;THETA=0.0004;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234401452 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.934;LDAF=0.0089;AVGPOST=0.9986;RSQ=0.9376;ERATE=0.0008;THETA=0.0038;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234401487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234401494 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0426;AVGPOST=0.9991;RSQ=0.9921;ERATE=0.0004;THETA=0.0004;AC=93;AN=2184 GT:DS:GL:BD 0.04258242 0
1 234401609 . C CCACA 155 PASS INDEL;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0019;AVGPOST=0.9980;RSQ=0.5875;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234401825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234401829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234402065 . G GA 71 PASS INDEL;BAVGPOST=0.984;BRSQ=0.550;LDAF=0.0203;AVGPOST=0.9761;RSQ=0.5336;ERATE=0.0072;THETA=0.0025;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234402077 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9346;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234402162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0204;AVGPOST=0.9994;RSQ=0.9880;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234402191 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7597;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234402277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6575;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234402281 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6330;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234402293 . C CAT 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6740;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234402333 . CGTT C 165 PASS INDEL;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7629;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234402375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.886;LDAF=0.0096;AVGPOST=0.9971;RSQ=0.8701;ERATE=0.0003;THETA=0.0002;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234402412 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0201;AVGPOST=0.9992;RSQ=0.9833;ERATE=0.0003;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234402456 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9335;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234402570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.1553;AVGPOST=0.9957;RSQ=0.9870;ERATE=0.0011;THETA=0.0003;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 234402617 . TG T 181 PASS INDEL;BAVGPOST=0.998;BRSQ=0.833;LDAF=0.0070;AVGPOST=0.9972;RSQ=0.8197;ERATE=0.0005;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234402621 . T TA 126 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0034;AVGPOST=0.9971;RSQ=0.6667;ERATE=0.0007;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234402628 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.875;LDAF=0.1247;AVGPOST=0.9754;RSQ=0.9078;ERATE=0.0050;THETA=0.0003;AC=271;AN=2184 GT:DS:GL:BD 0.12408425 0
1 234402630 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.869;LDAF=0.0060;AVGPOST=0.9974;RSQ=0.8094;ERATE=0.0005;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234402631 . T TG 267 PASS INDEL;BAVGPOST=0.983;BRSQ=0.624;LDAF=0.0276;AVGPOST=0.9901;RSQ=0.8614;ERATE=0.0004;THETA=0.0005;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234402632 . T TA 43 PASS INDEL;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0018;AVGPOST=0.9987;RSQ=0.6748;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234402649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.930;LDAF=0.0229;AVGPOST=0.9908;RSQ=0.8349;ERATE=0.0008;THETA=0.0032;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234403649 . CG C 99 PASS INDEL;BAVGPOST=0.981;BRSQ=0.496;LDAF=0.0215;AVGPOST=0.9972;RSQ=0.9421;ERATE=0.0004;THETA=0.0004;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234403660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.819;BRSQ=0.648;LDAF=0.3348;AVGPOST=0.8448;RSQ=0.7052;ERATE=0.0137;THETA=0.0002;AC=686;AN=2184 GT:DS:GL:BD 0.31410256 0
1 234403747 . TC T 6944 PASS INDEL;BAVGPOST=0.960;BRSQ=0.931;LDAF=0.3139;AVGPOST=0.9274;RSQ=0.8926;ERATE=0.0037;THETA=0.0005;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 234404053 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.880;LDAF=0.0312;AVGPOST=0.9801;RSQ=0.7445;ERATE=0.0021;THETA=0.0004;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234404067 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.859;LDAF=0.1378;AVGPOST=0.9840;RSQ=0.9494;ERATE=0.0012;THETA=0.0005;AC=300;AN=2184 GT:DS:GL:BD 0.13736264 0
1 234404182 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6393;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234404222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.678;LDAF=0.0040;AVGPOST=0.9960;RSQ=0.6268;ERATE=0.0012;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234404226 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.847;LDAF=0.0187;AVGPOST=0.9959;RSQ=0.9176;ERATE=0.0005;THETA=0.0004;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234404259 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0345;AVGPOST=0.9986;RSQ=0.9835;ERATE=0.0003;THETA=0.0003;AC=74;AN=2184 GT:DS:GL:BD 0.03388279 0
1 234404340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3895;ERATE=0.0005;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234404348 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6626;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234404349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234404411 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234404455 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7936;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234404566 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.957;LDAF=0.1433;AVGPOST=0.9904;RSQ=0.9719;ERATE=0.0004;THETA=0.0004;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 234404567 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.957;LDAF=0.1431;AVGPOST=0.9904;RSQ=0.9720;ERATE=0.0003;THETA=0.0074;AC=317;AN=2184 GT:DS:GL:BD 0.14514652 0
1 234404572 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.824;LDAF=0.0139;AVGPOST=0.9963;RSQ=0.8956;ERATE=0.0003;THETA=0.0009;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234404703 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234404739 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0063;AVGPOST=0.9985;RSQ=0.9031;ERATE=0.0003;THETA=0.0027;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234404774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9544;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234404775 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.985;LDAF=0.2413;AVGPOST=0.9930;RSQ=0.9896;ERATE=0.0004;THETA=0.0004;AC=526;AN=2184 GT:DS:GL:BD 0.24084249 0
1 234404785 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234404954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7515;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234405004 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7197;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234405036 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234405118 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1503;AVGPOST=0.9982;RSQ=0.9942;ERATE=0.0006;THETA=0.0002;AC=328;AN=2184 GT:DS:GL:BD 0.15018316 0
1 234405214 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2113;AVGPOST=0.9972;RSQ=0.9935;ERATE=0.0006;THETA=0.0017;AC=461;AN=2184 GT:DS:GL:BD 0.21108058 0
1 234405227 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234405263 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.561;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4378;ERATE=0.0005;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234405285 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0206;AVGPOST=0.9999;RSQ=0.9971;ERATE=0.0003;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234405345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8000;ERATE=0.0005;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234405368 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6762;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234405404 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1838;AVGPOST=0.9926;RSQ=0.9817;ERATE=0.0016;THETA=0.0004;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 234405431 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.839;LDAF=0.0033;AVGPOST=0.9976;RSQ=0.7192;ERATE=0.0008;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234405559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.983;LDAF=0.2364;AVGPOST=0.9889;RSQ=0.9783;ERATE=0.0015;THETA=0.0002;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 234405637 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3845;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234405703 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9367;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234405739 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0246;AVGPOST=0.9989;RSQ=0.9825;ERATE=0.0005;THETA=0.0007;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234405756 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6390;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234405761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0018;AVGPOST=0.9996;RSQ=0.8964;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234405829 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234405860 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6373;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234405891 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234405952 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.1045;AVGPOST=0.9981;RSQ=0.9923;ERATE=0.0004;THETA=0.0012;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 234406007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234406128 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.4632;AVGPOST=0.9973;RSQ=0.9955;ERATE=0.0006;THETA=0.0033;AC=1013;AN=2184 GT:DS:GL:BD 0.46382785 0
1 234406467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.867;LDAF=0.0103;AVGPOST=0.9964;RSQ=0.8618;ERATE=0.0008;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234406496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234406534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.912;LDAF=0.0146;AVGPOST=0.9982;RSQ=0.9422;ERATE=0.0005;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234406549 . A ATGCC 274 PASS INDEL;BAVGPOST=1.000;BRSQ=0.853;LDAF=0.0015;AVGPOST=0.9986;RSQ=0.5636;ERATE=0.0008;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234406561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9552;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234406571 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9186;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234406602 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1046;AVGPOST=0.9985;RSQ=0.9937;ERATE=0.0003;THETA=0.0005;AC=228;AN=2184 GT:DS:GL:BD 0.10439561 0
1 234406641 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1052;AVGPOST=0.9992;RSQ=0.9963;ERATE=0.0003;THETA=0.0001;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234406736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1087;AVGPOST=0.9981;RSQ=0.9912;ERATE=0.0012;THETA=0.0003;AC=237;AN=2184 GT:DS:GL:BD 0.10851648 0
1 234406743 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0356;AVGPOST=0.9995;RSQ=0.9937;ERATE=0.0003;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234406755 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7857;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234406785 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8130;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234406786 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8562;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234406872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7747;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234407012 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5627;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234407023 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8520;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234407038 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.857;LDAF=0.0102;AVGPOST=0.9972;RSQ=0.9062;ERATE=0.0005;THETA=0.0002;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234407103 rs57868402 C CATT 9756 PASS INDEL;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0700;AVGPOST=0.9988;RSQ=0.9917;ERATE=0.0004;THETA=0.0003;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234407106 . T TA 443 PASS INDEL;BAVGPOST=0.992;BRSQ=0.938;LDAF=0.0664;AVGPOST=0.9975;RSQ=0.9828;ERATE=0.0003;THETA=0.0002;AC=145;AN=2184 GT:DS:GL:BD 0.06639194 0
1 234407232 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0696;AVGPOST=0.9993;RSQ=0.9946;ERATE=0.0003;THETA=0.0002;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 234407245 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6829;ERATE=0.0004;THETA=0.0033;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234407248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234407380 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0024;AVGPOST=0.9990;RSQ=0.8314;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234407388 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.879;LDAF=0.0324;AVGPOST=0.9937;RSQ=0.9249;ERATE=0.0003;THETA=0.0006;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 234407525 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234407623 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0691;AVGPOST=0.9976;RSQ=0.9857;ERATE=0.0005;THETA=0.0004;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234407697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.741;LDAF=0.0062;AVGPOST=0.9964;RSQ=0.7728;ERATE=0.0004;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234407700 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.695;LDAF=0.0060;AVGPOST=0.9970;RSQ=0.7774;ERATE=0.0004;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234407767 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0681;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234407787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0682;AVGPOST=0.9995;RSQ=0.9959;ERATE=0.0003;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234407799 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9983;RSQ=0.7306;ERATE=0.0004;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234407826 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234407848 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234407871 . C CA 80 PASS INDEL;BAVGPOST=0.999;BRSQ=0.812;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5281;ERATE=0.0005;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234407914 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0682;AVGPOST=0.9997;RSQ=0.9978;ERATE=0.0003;THETA=0.0007;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234407959 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2948;AVGPOST=0.9989;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 234407996 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7844;AVGPOST=0.9964;RSQ=0.9934;ERATE=0.0003;THETA=0.0004;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 234408056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234408106 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1566;AVGPOST=0.9981;RSQ=0.9943;ERATE=0.0005;THETA=0.0003;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 234408128 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6974;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234408169 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0681;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234408217 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234408409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234408488 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0028;AVGPOST=0.9995;RSQ=0.9110;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234408519 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0396;AVGPOST=0.9982;RSQ=0.9802;ERATE=0.0004;THETA=0.0004;AC=86;AN=2184 GT:DS:GL:BD 0.03937729 0
1 234408623 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.4825;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234408687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.638;LDAF=0.0021;AVGPOST=0.9987;RSQ=0.7318;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234408694 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.969;LDAF=0.0705;AVGPOST=0.9981;RSQ=0.9884;ERATE=0.0006;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234408726 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8248;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234408941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234408967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8723;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234408992 . A AT 44 PASS INDEL;BAVGPOST=0.999;BRSQ=0.644;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.3579;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234409002 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0700;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234409014 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0683;AVGPOST=0.9997;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234409045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0125;AVGPOST=0.9987;RSQ=0.9617;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234409096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7632;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234409127 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.608;LDAF=0.0021;AVGPOST=0.9971;RSQ=0.4985;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234409153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0373;AVGPOST=0.9985;RSQ=0.9818;ERATE=0.0004;THETA=0.0003;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 234409163 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.7840;AVGPOST=0.9956;RSQ=0.9908;ERATE=0.0007;THETA=0.0002;AC=1711;AN=2184 GT:DS:GL:BD 0.78342491 1
1 234409234 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0711;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0006;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234409251 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7880;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234409301 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7079;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234409325 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0711;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234409343 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.4623;AVGPOST=0.9993;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=1010;AN=2184 GT:DS:GL:BD 0.46245420 0
1 234409372 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0709;AVGPOST=0.9991;RSQ=0.9935;ERATE=0.0004;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234409403 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.982;BRSQ=0.800;LDAF=0.0534;AVGPOST=0.9826;RSQ=0.8662;ERATE=0.0015;THETA=0.0004;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 234409459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0710;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234409472 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3794;AVGPOST=0.9986;RSQ=0.9972;ERATE=0.0005;THETA=0.0006;AC=828;AN=2184 GT:DS:GL:BD 0.37912089 0
1 234409498 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234409532 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0477;AVGPOST=0.9997;RSQ=0.9971;ERATE=0.0003;THETA=0.0003;AC=104;AN=2184 GT:DS:GL:BD 0.04761905 0
1 234409568 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0709;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234409611 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9998;RSQ=0.9961;ERATE=0.0003;THETA=0.0005;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234409662 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0714;AVGPOST=0.9992;RSQ=0.9946;ERATE=0.0004;THETA=0.0003;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234409664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0703;AVGPOST=0.9993;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234409718 . T TA 10460 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0710;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0005;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234409734 . T TA 50 PASS INDEL;BAVGPOST=0.994;BRSQ=0.601;LDAF=0.0095;AVGPOST=0.9899;RSQ=0.5851;ERATE=0.0023;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234409842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234409847 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0701;AVGPOST=0.9996;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234409876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.840;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8554;ERATE=0.0005;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234409922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.800;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7999;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234409953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0711;AVGPOST=0.9994;RSQ=0.9957;ERATE=0.0004;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234409971 . ACTT A 111 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4787;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234409974 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234410017 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8144;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234410018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234410063 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0710;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234410120 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234410136 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0085;AVGPOST=0.9993;RSQ=0.9734;ERATE=0.0003;THETA=0.0002;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234410151 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0709;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0006;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234410198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8504;ERATE=0.0007;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234410231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7124;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234410269 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0017;AVGPOST=0.9997;RSQ=0.9204;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234410275 . G GA 67 PASS INDEL;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7062;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234410282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234410284 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.1474;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=322;AN=2184 GT:DS:GL:BD 0.14743590 0
1 234410330 . G GC 860 PASS INDEL;BAVGPOST=0.997;BRSQ=0.862;LDAF=0.0086;AVGPOST=0.9962;RSQ=0.8094;ERATE=0.0009;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234410335 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6228;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234410339 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.915;LDAF=0.0065;AVGPOST=0.9988;RSQ=0.9314;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234410343 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0709;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234410428 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5682;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234410466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9841;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234410567 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0708;AVGPOST=0.9996;RSQ=0.9974;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234410670 . GA G 105 PASS INDEL;BAVGPOST=0.999;BRSQ=0.754;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6070;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234410690 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8039;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234410777 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.968;LDAF=0.0685;AVGPOST=0.9986;RSQ=0.9904;ERATE=0.0003;THETA=0.0002;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 234410778 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.7829;AVGPOST=0.9984;RSQ=0.9961;ERATE=0.0003;THETA=0.0001;AC=1710;AN=2184 GT:DS:GL:BD 0.78296703 1
1 234410798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6834;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234410805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0189;AVGPOST=0.9994;RSQ=0.9854;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234410883 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0709;AVGPOST=0.9999;RSQ=0.9990;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234410912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0709;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234410913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8388;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234410952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234411032 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0484;AVGPOST=0.9990;RSQ=0.9901;ERATE=0.0003;THETA=0.0003;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 234411047 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.973;LDAF=0.0707;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234411063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.962;LDAF=0.0706;AVGPOST=0.9984;RSQ=0.9888;ERATE=0.0003;THETA=0.0002;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234411081 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.951;LDAF=0.1587;AVGPOST=0.9903;RSQ=0.9727;ERATE=0.0010;THETA=0.0005;AC=341;AN=2184 GT:DS:GL:BD 0.15613553 0
1 234411085 . A AG 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0018;AVGPOST=0.9974;RSQ=0.4124;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234411144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0016;AVGPOST=0.9983;RSQ=0.5412;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234411170 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234411317 rs59483722 GTAGT G 6686 PASS INDEL;BAVGPOST=0.993;BRSQ=0.955;LDAF=0.0716;AVGPOST=0.9969;RSQ=0.9811;ERATE=0.0005;THETA=0.0003;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 234411334 . TAGAC T 4244 PASS INDEL;BAVGPOST=0.992;BRSQ=0.946;LDAF=0.0717;AVGPOST=0.9960;RSQ=0.9778;ERATE=0.0004;THETA=0.0004;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 234411342 rs56664635 CAG C 667 PASS INDEL;BAVGPOST=0.990;BRSQ=0.847;LDAF=0.0326;AVGPOST=0.9921;RSQ=0.9129;ERATE=0.0008;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 234411348 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.888;LDAF=0.0524;AVGPOST=0.9720;RSQ=0.7924;ERATE=0.0074;THETA=0.0002;AC=111;AN=2184 GT:DS:GL:BD 0.05082418 0
1 234411360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234411362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6299;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234411397 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0710;AVGPOST=0.9996;RSQ=0.9973;ERATE=0.0003;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234411408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8065;ERATE=0.0004;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234411429 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0708;AVGPOST=0.9995;RSQ=0.9965;ERATE=0.0003;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234411464 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0002;AVGPOST=0.9997;RSQ=0.0926;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234411503 rs61254926 AAAAAAAAT A 3948 PASS INDEL;BAVGPOST=0.984;BRSQ=0.770;LDAF=0.0585;AVGPOST=0.9431;RSQ=0.6041;ERATE=0.0073;THETA=0.0006;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 234411507 rs61254926 A AT 552 PASS INDEL;BAVGPOST=0.979;BRSQ=0.561;LDAF=0.0245;AVGPOST=0.9760;RSQ=0.6494;ERATE=0.0026;THETA=0.0005;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234411541 rs61662001 CT C 248 PASS INDEL;BAVGPOST=0.993;BRSQ=0.784;LDAF=0.0187;AVGPOST=0.9959;RSQ=0.9234;ERATE=0.0004;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234411596 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3154;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=690;AN=2184 GT:DS:GL:BD 0.31593406 0
1 234411597 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.558;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234411605 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6916;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234411715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0041;AVGPOST=0.9981;RSQ=0.8093;ERATE=0.0005;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234411728 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9396;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234411754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6301;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234411820 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0714;AVGPOST=0.9957;RSQ=0.9753;ERATE=0.0006;THETA=0.0002;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234411821 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.976;LDAF=0.0699;AVGPOST=0.9978;RSQ=0.9851;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234411832 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8693;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234411855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0710;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234411948 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5968;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234411949 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.662;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7220;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234411992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0073;AVGPOST=0.9993;RSQ=0.9636;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234412009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234412056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0709;AVGPOST=0.9998;RSQ=0.9983;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234412101 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234412102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234412143 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.853;LDAF=0.0084;AVGPOST=0.9978;RSQ=0.8968;ERATE=0.0003;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234412238 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0710;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234412266 . TCTAA T 4276 PASS INDEL;BAVGPOST=0.998;BRSQ=0.974;LDAF=0.0382;AVGPOST=0.9959;RSQ=0.9585;ERATE=0.0004;THETA=0.0004;AC=81;AN=2184 GT:DS:GL:BD 0.03708791 0
1 234412291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234412292 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3146;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 234412313 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0046;AVGPOST=0.9991;RSQ=0.9206;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234412369 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0708;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234412380 . AAGG A 2222 PASS INDEL;BAVGPOST=0.998;BRSQ=0.964;LDAF=0.0166;AVGPOST=0.9986;RSQ=0.9605;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234412398 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0708;AVGPOST=0.9998;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234412427 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2286;AVGPOST=0.9985;RSQ=0.9963;ERATE=0.0004;THETA=0.0002;AC=500;AN=2184 GT:DS:GL:BD 0.22893773 0
1 234412518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9545;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234412536 . AAT A 170 PASS INDEL;BAVGPOST=0.996;BRSQ=0.618;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5622;ERATE=0.0008;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234412537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0718;AVGPOST=0.9992;RSQ=0.9955;ERATE=0.0003;THETA=0.0005;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 234412584 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0210;AVGPOST=0.9992;RSQ=0.9848;ERATE=0.0003;THETA=0.0004;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234412799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0710;AVGPOST=0.9997;RSQ=0.9977;ERATE=0.0003;THETA=0.0002;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234412847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4726;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234412863 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0713;AVGPOST=0.9989;RSQ=0.9943;ERATE=0.0003;THETA=0.0002;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234412951 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5281;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234412955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0038;AVGPOST=0.9960;RSQ=0.5849;ERATE=0.0012;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234412967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9699;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234413007 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0717;AVGPOST=0.9991;RSQ=0.9945;ERATE=0.0003;THETA=0.0002;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 234413080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1750;AVGPOST=0.9991;RSQ=0.9972;ERATE=0.0004;THETA=0.0007;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234413081 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9989;RSQ=0.6983;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234413147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0709;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0006;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234413155 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8454;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234413248 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.857;LDAF=0.0035;AVGPOST=0.9985;RSQ=0.8362;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234413254 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8889;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234413262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8519;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234413359 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1429;AVGPOST=0.9992;RSQ=0.9975;ERATE=0.0003;THETA=0.0005;AC=312;AN=2184 GT:DS:GL:BD 0.14285715 0
1 234413561 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234413616 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234413626 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7625;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234413665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0025;AVGPOST=0.9989;RSQ=0.8391;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234413666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234413748 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234413811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.6509;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234413864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9995;RSQ=0.9702;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234413889 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5826;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234413901 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0716;AVGPOST=0.9979;RSQ=0.9868;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234413921 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0701;AVGPOST=0.9981;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234413965 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0732;AVGPOST=0.9957;RSQ=0.9762;ERATE=0.0005;THETA=0.0004;AC=158;AN=2184 GT:DS:GL:BD 0.07234433 0
1 234413988 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.4932;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234414003 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0348;AVGPOST=0.9975;RSQ=0.9679;ERATE=0.0004;THETA=0.0005;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234414009 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1523;AVGPOST=0.9972;RSQ=0.9906;ERATE=0.0005;THETA=0.0002;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 234414022 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.4774;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234414263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.961;BRSQ=0.766;LDAF=0.9152;AVGPOST=0.9458;RSQ=0.7451;ERATE=0.0136;THETA=0.0002;AC=2032;AN=2184 GT:DS:GL:BD 0.93040293 1
1 234414320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0710;AVGPOST=0.9996;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234414395 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6879;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234414480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0711;AVGPOST=0.9991;RSQ=0.9943;ERATE=0.0004;THETA=0.0002;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234414516 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.971;LDAF=0.0709;AVGPOST=0.9992;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234414521 . C CAGAG 8834 PASS INDEL;BAVGPOST=0.995;BRSQ=0.967;LDAF=0.0713;AVGPOST=0.9984;RSQ=0.9898;ERATE=0.0004;THETA=0.0006;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234414530 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4705;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234414554 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.0728;AVGPOST=0.9975;RSQ=0.9856;ERATE=0.0005;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 234414585 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0718;AVGPOST=0.9981;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234414651 . CAT C 96 PASS INDEL;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234414665 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0147;AVGPOST=0.9989;RSQ=0.9709;ERATE=0.0003;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234414666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234414669 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0693;AVGPOST=0.9993;RSQ=0.9953;ERATE=0.0004;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 234414739 . CG C 6440 PASS INDEL;BAVGPOST=0.993;BRSQ=0.943;LDAF=0.0707;AVGPOST=0.9977;RSQ=0.9863;ERATE=0.0004;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234414753 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234414757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.968;LDAF=0.0726;AVGPOST=0.9989;RSQ=0.9926;ERATE=0.0004;THETA=0.0004;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 234414782 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.954;LDAF=0.0705;AVGPOST=0.9993;RSQ=0.9951;ERATE=0.0003;THETA=0.0005;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234414824 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234414856 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0708;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0002;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234414952 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0503;AVGPOST=0.9995;RSQ=0.9952;ERATE=0.0003;THETA=0.0006;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234414953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8695;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234415038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6579;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234415067 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7728;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234415071 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7591;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234415094 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.906;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8695;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234415123 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234415133 . CA C 89 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7362;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234415144 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0711;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0003;THETA=0.0001;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234415172 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0706;AVGPOST=0.9984;RSQ=0.9904;ERATE=0.0003;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234415173 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6678;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234415192 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1358;AVGPOST=0.9977;RSQ=0.9925;ERATE=0.0003;THETA=0.0003;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 234415275 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234415278 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234415290 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234415446 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234415458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5126;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234415459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6808;ERATE=0.0008;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234415514 . TCA T 172 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9984;RSQ=0.7831;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234415734 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234415745 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6043;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234415806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.4495;AVGPOST=0.9963;RSQ=0.9939;ERATE=0.0007;THETA=0.0003;AC=984;AN=2184 GT:DS:GL:BD 0.45054945 0
1 234415913 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0069;AVGPOST=0.9995;RSQ=0.9702;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234416059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0112;AVGPOST=0.9996;RSQ=0.9862;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234416086 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.9119;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234416108 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9761;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234416300 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0259;AVGPOST=0.9996;RSQ=0.9948;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234416309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6330;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234416353 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234416442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3058;AVGPOST=0.9962;RSQ=0.9941;ERATE=0.0004;THETA=0.0007;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 234416467 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.611;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4751;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234416468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.892;LDAF=0.0043;AVGPOST=0.9984;RSQ=0.8524;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234416597 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0701;AVGPOST=0.9992;RSQ=0.9950;ERATE=0.0003;THETA=0.0002;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234416693 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7150;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234416709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0116;AVGPOST=0.9971;RSQ=0.9033;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234416758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8102;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234416768 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0219;AVGPOST=0.9976;RSQ=0.9596;ERATE=0.0005;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234416815 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234416833 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6188;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234416833 . C CA 251 PASS INDEL;BAVGPOST=0.996;BRSQ=0.577;LDAF=0.0081;AVGPOST=0.9945;RSQ=0.7829;ERATE=0.0004;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234416834 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0048;AVGPOST=0.9993;RSQ=0.9333;ERATE=0.0007;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234416836 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.6621;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234416988 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0159;AVGPOST=0.9993;RSQ=0.9830;ERATE=0.0003;THETA=0.0006;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234417010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7679;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234417214 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9584;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234417274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234417303 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9574;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234417417 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0197;AVGPOST=0.9973;RSQ=0.9457;ERATE=0.0003;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234417529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9995;RSQ=0.9862;ERATE=0.0004;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234417576 . T TA 52 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7973;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234417609 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0157;AVGPOST=0.9997;RSQ=0.9922;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234417623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1746;AVGPOST=0.9983;RSQ=0.9959;ERATE=0.0003;THETA=0.0003;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 234417662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0085;AVGPOST=0.9988;RSQ=0.9539;ERATE=0.0005;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234417725 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0065;AVGPOST=0.9998;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234417729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7662;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234417732 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0038;AVGPOST=0.9984;RSQ=0.8338;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234417755 rs5781782 CT C 2552 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0161;AVGPOST=0.9983;RSQ=0.9507;ERATE=0.0005;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234417778 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234418131 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0603;AVGPOST=0.9995;RSQ=0.9957;ERATE=0.0003;THETA=0.0004;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 234418133 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5744;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234418134 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5959;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234418173 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0511;AVGPOST=0.9979;RSQ=0.9857;ERATE=0.0003;THETA=0.0004;AC=112;AN=2184 GT:DS:GL:BD 0.05128205 0
1 234418189 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0028;AVGPOST=0.9987;RSQ=0.7968;ERATE=0.0004;THETA=0.0030;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234418238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0262;AVGPOST=0.9998;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234418286 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0490;AVGPOST=0.9997;RSQ=0.9967;ERATE=0.0003;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 234418303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0501;AVGPOST=0.9984;RSQ=0.9868;ERATE=0.0003;THETA=0.0005;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234418329 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.673;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234418359 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0113;AVGPOST=0.9968;RSQ=0.8930;ERATE=0.0009;THETA=0.0008;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234418397 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234418426 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.6009;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234418460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0157;AVGPOST=0.9994;RSQ=0.9806;ERATE=0.0004;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234418524 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0396;AVGPOST=0.9994;RSQ=0.9934;ERATE=0.0003;THETA=0.0002;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 234418634 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234418728 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8679;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234418772 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234418835 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234418862 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0502;AVGPOST=0.9996;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234418882 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234418922 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8838;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234418935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5766;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234418998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7646;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234419013 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234419194 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9997;RSQ=0.9949;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234419218 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0471;AVGPOST=0.9998;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 234419295 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.5855;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234419345 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9551;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234419351 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0004;AVGPOST=0.9997;RSQ=0.6813;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234419534 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9996;RSQ=0.9106;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234419580 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0261;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0008;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234419757 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234419771 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0262;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0006;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234420016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0085;AVGPOST=0.9985;RSQ=0.9355;ERATE=0.0004;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234420123 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8790;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234420229 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2736;AVGPOST=0.9989;RSQ=0.9975;ERATE=0.0004;THETA=0.0002;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234420240 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234420257 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0144;AVGPOST=0.9988;RSQ=0.9734;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234420258 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8761;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234420316 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0066;AVGPOST=0.9993;RSQ=0.9635;ERATE=0.0003;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234420323 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2729;AVGPOST=0.9975;RSQ=0.9953;ERATE=0.0004;THETA=0.0003;AC=596;AN=2184 GT:DS:GL:BD 0.27289379 0
1 234420337 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0046;AVGPOST=0.9994;RSQ=0.9465;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234420363 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234420436 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2734;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0004;AC=597;AN=2184 GT:DS:GL:BD 0.27335164 0
1 234420444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234420445 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234420480 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0493;AVGPOST=0.9992;RSQ=0.9917;ERATE=0.0007;THETA=0.0002;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 234420612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7901;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234420659 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234420731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9094;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234420745 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3299;AVGPOST=0.9990;RSQ=0.9981;ERATE=0.0004;THETA=0.0002;AC=721;AN=2184 GT:DS:GL:BD 0.33012819 0
1 234420787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1860;AVGPOST=0.9997;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 234420859 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8431;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234420905 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234420934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234420935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234421046 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234421081 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0468;AVGPOST=0.9995;RSQ=0.9970;ERATE=0.0003;THETA=0.0002;AC=103;AN=2184 GT:DS:GL:BD 0.04716117 0
1 234421082 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234421087 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234421109 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234421168 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9328;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234421177 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0151;AVGPOST=0.9999;RSQ=0.9956;ERATE=0.0003;THETA=0.0007;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234421180 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2738;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0005;AC=598;AN=2184 GT:DS:GL:BD 0.27380952 0
1 234421303 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234421375 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234421444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8297;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234421570 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8870;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234421699 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.782;LDAF=0.0028;AVGPOST=0.9982;RSQ=0.7387;ERATE=0.0006;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234421700 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234421799 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8348;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234421871 rs34405897 GT G 253 PASS INDEL;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8636;ERATE=0.0006;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234421883 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1848;AVGPOST=0.9976;RSQ=0.9939;ERATE=0.0004;THETA=0.0005;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 234421972 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234422016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0161;AVGPOST=0.9990;RSQ=0.9716;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234422058 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0207;AVGPOST=0.9995;RSQ=0.9895;ERATE=0.0004;THETA=0.0003;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234422091 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.760;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5951;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234422127 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.802;LDAF=0.0026;AVGPOST=0.9976;RSQ=0.6148;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234422162 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5804;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234422206 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9463;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234422265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6986;AVGPOST=0.9988;RSQ=0.9975;ERATE=0.0003;THETA=0.0002;AC=1526;AN=2184 GT:DS:GL:BD 0.69871795 1
1 234422295 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1862;AVGPOST=0.9993;RSQ=0.9979;ERATE=0.0003;THETA=0.0010;AC=406;AN=2184 GT:DS:GL:BD 0.18589744 0
1 234422342 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5568;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234422430 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9991;RSQ=0.3937;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234422452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234422457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8161;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234422508 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0025;AVGPOST=0.9993;RSQ=0.8858;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234422559 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1193;AVGPOST=0.9991;RSQ=0.9963;ERATE=0.0004;THETA=0.0006;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234422582 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.947;LDAF=0.6303;AVGPOST=0.9677;RSQ=0.9509;ERATE=0.0066;THETA=0.0003;AC=1384;AN=2184 GT:DS:GL:BD 0.63369966 1
1 234422583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.947;LDAF=0.6327;AVGPOST=0.9744;RSQ=0.9618;ERATE=0.0036;THETA=0.0003;AC=1389;AN=2184 GT:DS:GL:BD 0.63598901 1
1 234422605 . AAAAT A 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4666;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234422617 . TAAATA T 268 PASS INDEL;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9994;RSQ=0.7277;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234422630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0003;AVGPOST=0.9995;RSQ=0.4425;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234422847 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0491;AVGPOST=0.9971;RSQ=0.9745;ERATE=0.0006;THETA=0.0003;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 234422852 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7056;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234422888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.792;LDAF=0.0041;AVGPOST=0.9968;RSQ=0.6650;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234422926 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1201;AVGPOST=0.9978;RSQ=0.9910;ERATE=0.0004;THETA=0.0005;AC=261;AN=2184 GT:DS:GL:BD 0.11950549 0
1 234422942 . AAAAT A 286 PASS INDEL;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7615;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234422965 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.967;LDAF=0.7083;AVGPOST=0.9903;RSQ=0.9816;ERATE=0.0021;THETA=0.0006;AC=1551;AN=2184 GT:DS:GL:BD 0.71016484 1
1 234422971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.674;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4486;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234423067 rs111277239 CAT C 5278 PASS INDEL;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0483;AVGPOST=0.9976;RSQ=0.9779;ERATE=0.0005;THETA=0.0004;AC=106;AN=2184 GT:DS:GL:BD 0.04853480 0
1 234423078 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.972;LDAF=0.0399;AVGPOST=0.9986;RSQ=0.9854;ERATE=0.0003;THETA=0.0007;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 234423155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234423165 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.6912;AVGPOST=0.9978;RSQ=0.9962;ERATE=0.0004;THETA=0.0004;AC=1509;AN=2184 GT:DS:GL:BD 0.69093406 1
1 234423216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6907;AVGPOST=0.9968;RSQ=0.9942;ERATE=0.0006;THETA=0.0003;AC=1509;AN=2184 GT:DS:GL:BD 0.69093406 1
1 234423267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0013;AVGPOST=0.9986;RSQ=0.6127;ERATE=0.0003;THETA=0.0058;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234423300 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7801;ERATE=0.0003;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234423366 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0014;AVGPOST=0.9996;RSQ=0.8787;ERATE=0.0003;THETA=0.0066;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234423721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0092;AVGPOST=0.9985;RSQ=0.9452;ERATE=0.0003;THETA=0.0012;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234423769 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0018;AVGPOST=0.9997;RSQ=0.9181;ERATE=0.0003;THETA=0.0020;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234423872 . ATCC A 3084 PASS INDEL;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0232;AVGPOST=0.9973;RSQ=0.9555;ERATE=0.0005;THETA=0.0004;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234423934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9855;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234424001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8052;ERATE=0.0004;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234424094 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234424105 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0138;AVGPOST=0.9998;RSQ=0.9924;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234424190 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0388;AVGPOST=0.9987;RSQ=0.9870;ERATE=0.0003;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234424200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7727;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234424204 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9349;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234424234 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234424257 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6567;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234424289 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3553;AVGPOST=0.9973;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 234424312 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234424371 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5281;AVGPOST=0.9979;RSQ=0.9970;ERATE=0.0005;THETA=0.0028;AC=1154;AN=2184 GT:DS:GL:BD 0.52838826 1
1 234424429 . CCA C 357 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0023;AVGPOST=0.9983;RSQ=0.7247;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234424601 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.3353;AVGPOST=0.9979;RSQ=0.9968;ERATE=0.0007;THETA=0.0022;AC=732;AN=2184 GT:DS:GL:BD 0.33516484 0
1 234424614 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3394;AVGPOST=0.9972;RSQ=0.9951;ERATE=0.0006;THETA=0.0007;AC=742;AN=2184 GT:DS:GL:BD 0.33974358 0
1 234424671 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3338;AVGPOST=0.9986;RSQ=0.9979;ERATE=0.0003;THETA=0.0004;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 234424751 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3468;AVGPOST=0.9965;RSQ=0.9944;ERATE=0.0007;THETA=0.0009;AC=757;AN=2184 GT:DS:GL:BD 0.34661171 0
1 234424779 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8881;ERATE=0.0003;THETA=0.0014;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234424783 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.5418;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0007;AC=1183;AN=2184 GT:DS:GL:BD 0.54166669 1
1 234424970 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.6196;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234425080 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6047;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234425089 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8788;ERATE=0.0005;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234425090 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234425097 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0004;AVGPOST=0.9992;RSQ=0.3142;ERATE=0.0003;THETA=0.0001;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234425126 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.950;LDAF=0.0140;AVGPOST=0.9994;RSQ=0.9816;ERATE=0.0003;THETA=0.0012;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234425286 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6633;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234425287 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2013;AVGPOST=0.9972;RSQ=0.9933;ERATE=0.0003;THETA=0.0002;AC=440;AN=2184 GT:DS:GL:BD 0.20146520 0
1 234425313 . TG T 30 PASS INDEL;BAVGPOST=1.000;BRSQ=0.723;LDAF=0.0022;AVGPOST=0.9980;RSQ=0.5946;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234425332 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3376;AVGPOST=0.9952;RSQ=0.9923;ERATE=0.0007;THETA=0.0008;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 234425347 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0134;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0083;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234425939 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.752;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.7210;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234425953 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0133;AVGPOST=0.9980;RSQ=0.9396;ERATE=0.0003;THETA=0.0033;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234425956 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.2317;AVGPOST=0.9937;RSQ=0.9862;ERATE=0.0005;THETA=0.0061;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 234426002 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8855;ERATE=0.0003;THETA=0.0027;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234426052 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0004;THETA=0.0119;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234426240 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.7872;AVGPOST=0.9925;RSQ=0.9842;ERATE=0.0004;THETA=0.0008;AC=1719;AN=2184 GT:DS:GL:BD 0.78708792 1
1 234426245 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.982;LDAF=0.7921;AVGPOST=0.9921;RSQ=0.9835;ERATE=0.0006;THETA=0.0125;AC=1729;AN=2184 GT:DS:GL:BD 0.79166669 1
1 234426306 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.973;LDAF=0.8045;AVGPOST=0.9846;RSQ=0.9658;ERATE=0.0012;THETA=0.0054;AC=1758;AN=2184 GT:DS:GL:BD 0.80494505 1
1 234426307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0061;AVGPOST=0.9949;RSQ=0.6872;ERATE=0.0009;THETA=0.0042;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234426349 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234426350 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.767;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0052;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234426379 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.874;LDAF=0.0041;AVGPOST=0.9980;RSQ=0.8060;ERATE=0.0005;THETA=0.0151;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234426417 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0048;AVGPOST=0.9990;RSQ=0.9141;ERATE=0.0003;THETA=0.0021;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234426478 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.966;LDAF=0.3552;AVGPOST=0.9809;RSQ=0.9755;ERATE=0.0024;THETA=0.0030;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 234426505 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5767;ERATE=0.0004;THETA=0.0084;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234426536 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0003;THETA=0.0110;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234426731 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6518;ERATE=0.0003;THETA=0.0072;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234426733 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8561;ERATE=0.0029;THETA=0.0102;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234426758 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0061;AVGPOST=0.9992;RSQ=0.9475;ERATE=0.0003;THETA=0.0160;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234426785 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.959;LDAF=0.9274;AVGPOST=0.9903;RSQ=0.9479;ERATE=0.0034;THETA=0.0120;AC=2028;AN=2184 GT:DS:GL:BD 0.92857140 1
1 234426786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0096;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234426863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.9113;ERATE=0.0003;THETA=0.0069;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234426872 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.961;LDAF=0.0640;AVGPOST=0.9953;RSQ=0.9720;ERATE=0.0004;THETA=0.0078;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 234426947 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8456;ERATE=0.0003;THETA=0.0033;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234427039 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8022;ERATE=0.0004;THETA=0.0056;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234427083 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.3223;AVGPOST=0.9920;RSQ=0.9871;ERATE=0.0004;THETA=0.0106;AC=701;AN=2184 GT:DS:GL:BD 0.32097068 0
1 234427131 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0077;AVGPOST=0.9993;RSQ=0.9704;ERATE=0.0003;THETA=0.0034;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234427135 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.2633;AVGPOST=0.9969;RSQ=0.9946;ERATE=0.0003;THETA=0.0062;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 234427320 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.847;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8477;ERATE=0.0003;THETA=0.0084;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234427329 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.977;LDAF=0.1566;AVGPOST=0.9939;RSQ=0.9805;ERATE=0.0023;THETA=0.0015;AC=340;AN=2184 GT:DS:GL:BD 0.15567766 0
1 234427369 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7512;ERATE=0.0004;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234427534 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.6152;AVGPOST=0.9957;RSQ=0.9936;ERATE=0.0008;THETA=0.0002;AC=1343;AN=2184 GT:DS:GL:BD 0.61492676 1
1 234427612 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.9718;AVGPOST=0.9988;RSQ=0.9831;ERATE=0.0003;THETA=0.0011;AC=2122;AN=2184 GT:DS:GL:BD 0.97161174 1
1 234427616 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6226;AVGPOST=0.9962;RSQ=0.9935;ERATE=0.0012;THETA=0.0003;AC=1359;AN=2184 GT:DS:GL:BD 0.62225276 1
1 234427671 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0730;AVGPOST=0.9989;RSQ=0.9950;ERATE=0.0003;THETA=0.0005;AC=160;AN=2184 GT:DS:GL:BD 0.07326008 0
1 234427753 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3396;AVGPOST=0.9973;RSQ=0.9956;ERATE=0.0007;THETA=0.0003;AC=741;AN=2184 GT:DS:GL:BD 0.33928570 0
1 234427808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234427910 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234427967 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0167;AVGPOST=0.9992;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234428086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6907;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234428105 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0116;AVGPOST=0.9996;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234428134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7417;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234428183 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0045;AVGPOST=0.9993;RSQ=0.9364;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234428358 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.1014;AVGPOST=0.9972;RSQ=0.9879;ERATE=0.0003;THETA=0.0004;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 234428373 . TG T 12 PASS INDEL;BAVGPOST=0.998;BRSQ=0.700;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.4822;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234428398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234428505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9146;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234428527 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3693;AVGPOST=0.9945;RSQ=0.9907;ERATE=0.0010;THETA=0.0043;AC=806;AN=2184 GT:DS:GL:BD 0.36904761 0
1 234428570 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0035;AVGPOST=0.9990;RSQ=0.8766;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234428764 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234428789 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0051;AVGPOST=0.9989;RSQ=0.9134;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234428792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3128;AVGPOST=0.9973;RSQ=0.9947;ERATE=0.0005;THETA=0.0002;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 234428811 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3118;AVGPOST=0.9964;RSQ=0.9933;ERATE=0.0006;THETA=0.0001;AC=679;AN=2184 GT:DS:GL:BD 0.31089744 0
1 234428849 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.894;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9069;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234429102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8326;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234429147 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.0566;AVGPOST=0.9984;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 234429202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0049;AVGPOST=0.9996;RSQ=0.9740;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234429203 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234429219 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3341;AVGPOST=0.9997;RSQ=0.9994;ERATE=0.0003;THETA=0.0004;AC=729;AN=2184 GT:DS:GL:BD 0.33379120 0
1 234429222 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8427;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234429236 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7717;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234429243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0112;AVGPOST=0.9991;RSQ=0.9676;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234429319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2624;AVGPOST=0.9990;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=572;AN=2184 GT:DS:GL:BD 0.26190478 0
1 234429321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0028;AVGPOST=0.9990;RSQ=0.8837;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234429401 rs4027084 AAGAG A 37467 PASS INDEL;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3531;AVGPOST=0.9985;RSQ=0.9972;ERATE=0.0004;THETA=0.0003;AC=772;AN=2184 GT:DS:GL:BD 0.35347986 0
1 234429504 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234429550 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.3826;AVGPOST=0.9990;RSQ=0.9982;ERATE=0.0004;THETA=0.0010;AC=836;AN=2184 GT:DS:GL:BD 0.38278389 0
1 234429598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.925;LDAF=0.0189;AVGPOST=0.9984;RSQ=0.9649;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234429662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.965;LDAF=0.0899;AVGPOST=0.9941;RSQ=0.9744;ERATE=0.0004;THETA=0.0006;AC=196;AN=2184 GT:DS:GL:BD 0.08974359 0
1 234429666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6622;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234429685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6941;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234429721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6409;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234429727 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3749;AVGPOST=0.9979;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=819;AN=2184 GT:DS:GL:BD 0.37500000 0
1 234429844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0003;THETA=0.0036;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234429913 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234429968 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1495;AVGPOST=0.9988;RSQ=0.9962;ERATE=0.0004;THETA=0.0002;AC=324;AN=2184 GT:DS:GL:BD 0.14835165 0
1 234429972 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234430020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.984;LDAF=0.0290;AVGPOST=0.9994;RSQ=0.9913;ERATE=0.0004;THETA=0.0001;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234430318 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.0157;AVGPOST=0.9998;RSQ=0.9928;ERATE=0.0003;THETA=0.0002;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234430323 . TG T 12 PASS INDEL;BAVGPOST=1.000;BRSQ=0.742;LDAF=0.0013;AVGPOST=0.9985;RSQ=0.5524;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234430330 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234430413 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234430419 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0722;AVGPOST=0.9987;RSQ=0.9929;ERATE=0.0004;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 234430501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234430609 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.978;LDAF=0.1606;AVGPOST=0.9946;RSQ=0.9879;ERATE=0.0005;THETA=0.0005;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 234430647 . C CT 1495 PASS INDEL;BAVGPOST=0.902;BRSQ=0.660;LDAF=0.1547;AVGPOST=0.9102;RSQ=0.7601;ERATE=0.0077;THETA=0.0002;AC=334;AN=2184 GT:DS:GL:BD 0.15293041 0
1 234430649 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.2420;AVGPOST=0.9968;RSQ=0.9933;ERATE=0.0005;THETA=0.0003;AC=529;AN=2184 GT:DS:GL:BD 0.24221611 0
1 234430650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.996;LDAF=0.4844;AVGPOST=0.9935;RSQ=0.9915;ERATE=0.0006;THETA=0.0049;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 234430773 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0028;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234430838 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.993;LDAF=0.3878;AVGPOST=0.9941;RSQ=0.9911;ERATE=0.0004;THETA=0.0004;AC=847;AN=2184 GT:DS:GL:BD 0.38782051 0
1 234430840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5291;ERATE=0.0004;THETA=0.0059;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234430841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6616;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234430950 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5536;ERATE=0.0004;THETA=0.0066;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234430996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0085;AVGPOST=0.9985;RSQ=0.9336;ERATE=0.0003;THETA=0.0015;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234431016 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0186;AVGPOST=0.9995;RSQ=0.9879;ERATE=0.0003;THETA=0.0045;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234431044 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7465;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234431282 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.677;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234431320 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.984;LDAF=0.5078;AVGPOST=0.9839;RSQ=0.9788;ERATE=0.0044;THETA=0.0009;AC=1109;AN=2184 GT:DS:GL:BD 0.50778389 1
1 234431451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.752;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0132;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234431463 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0392;AVGPOST=0.9992;RSQ=0.9925;ERATE=0.0003;THETA=0.0032;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234431561 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0035;AVGPOST=0.9947;RSQ=0.5026;ERATE=0.0006;THETA=0.0041;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234431582 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.972;LDAF=0.7326;AVGPOST=0.9784;RSQ=0.9657;ERATE=0.0025;THETA=0.0004;AC=1609;AN=2184 GT:DS:GL:BD 0.73672163 1
1 234431662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.819;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9164;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234431805 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7725;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234431823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0190;AVGPOST=0.9991;RSQ=0.9811;ERATE=0.0003;THETA=0.0020;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234431844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0067;AVGPOST=0.9994;RSQ=0.9580;ERATE=0.0003;THETA=0.0014;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234431870 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7304;ERATE=0.0003;THETA=0.0050;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234431891 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0003;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234431995 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234432004 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3262;AVGPOST=0.9942;RSQ=0.9900;ERATE=0.0005;THETA=0.0036;AC=710;AN=2184 GT:DS:GL:BD 0.32509157 0
1 234432013 . C CA 64 PASS INDEL;BAVGPOST=0.999;BRSQ=0.750;LDAF=0.0039;AVGPOST=0.9966;RSQ=0.6449;ERATE=0.0012;THETA=0.0025;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234432066 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234432069 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234432074 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.5920;AVGPOST=0.9947;RSQ=0.9925;ERATE=0.0005;THETA=0.0005;AC=1293;AN=2184 GT:DS:GL:BD 0.59203297 1
1 234432155 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234432158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.6868;AVGPOST=0.9961;RSQ=0.9934;ERATE=0.0008;THETA=0.0003;AC=1501;AN=2184 GT:DS:GL:BD 0.68727106 1
1 234432172 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0080;AVGPOST=0.9996;RSQ=0.9807;ERATE=0.0003;THETA=0.0023;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234432179 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0065;AVGPOST=0.9999;RSQ=0.9898;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234432242 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234432276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0710;AVGPOST=0.9990;RSQ=0.9943;ERATE=0.0003;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234432317 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0708;AVGPOST=0.9991;RSQ=0.9947;ERATE=0.0003;THETA=0.0004;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234432399 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234432409 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234432459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.6886;AVGPOST=0.9953;RSQ=0.9929;ERATE=0.0004;THETA=0.0002;AC=1505;AN=2184 GT:DS:GL:BD 0.68910259 1
1 234432465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.6880;AVGPOST=0.9962;RSQ=0.9938;ERATE=0.0005;THETA=0.0003;AC=1503;AN=2184 GT:DS:GL:BD 0.68818682 1
1 234432480 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6580;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234432497 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0108;AVGPOST=0.9995;RSQ=0.9795;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234432516 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6105;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234432522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234432640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.2312;AVGPOST=0.9933;RSQ=0.9867;ERATE=0.0005;THETA=0.0004;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 234432650 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7533;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234432718 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.4230;AVGPOST=0.9918;RSQ=0.9869;ERATE=0.0004;THETA=0.0033;AC=923;AN=2184 GT:DS:GL:BD 0.42261904 0
1 234432781 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0028;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0169;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234432877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0014;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0003;THETA=0.0109;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234432936 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7453;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234432941 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7853;ERATE=0.0003;THETA=0.0128;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234433056 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8894;ERATE=0.0003;THETA=0.0076;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234433089 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0204;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234433158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6913;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234433297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.739;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7682;ERATE=0.0003;THETA=0.0123;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234433349 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.895;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5932;ERATE=0.0003;THETA=0.0125;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234433357 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.967;LDAF=0.0257;AVGPOST=0.9977;RSQ=0.9640;ERATE=0.0005;THETA=0.0041;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234433448 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.514;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6738;ERATE=0.0003;THETA=0.0101;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234433458 . CCAGCCTGGGTGA C 1467 PASS INDEL;BAVGPOST=0.997;BRSQ=0.712;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.7799;ERATE=0.0005;THETA=0.0046;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234433533 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.9998;AVGPOST=0.9997;RSQ=0.0640;ERATE=0.0003;THETA=0.0183;AC=2184;AN=2184 GT:DS:GL:BD 1.00000000 1
1 234433731 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0052;AVGPOST=0.9950;RSQ=0.6200;ERATE=0.0027;THETA=0.0070;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234433731 rs111606250 CA C 189 PASS INDEL;BAVGPOST=0.999;BRSQ=0.931;LDAF=0.0064;AVGPOST=0.9989;RSQ=0.9250;ERATE=0.0003;THETA=0.0141;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234433738 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0062;AVGPOST=0.9994;RSQ=0.9605;ERATE=0.0003;THETA=0.0172;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234433747 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.964;LDAF=0.1559;AVGPOST=0.9904;RSQ=0.9730;ERATE=0.0030;THETA=0.0064;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 234433827 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.968;LDAF=0.1567;AVGPOST=0.9900;RSQ=0.9747;ERATE=0.0011;THETA=0.0092;AC=339;AN=2184 GT:DS:GL:BD 0.15521978 0
1 234433886 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.942;LDAF=0.1240;AVGPOST=0.9840;RSQ=0.9452;ERATE=0.0026;THETA=0.0212;AC=268;AN=2184 GT:DS:GL:BD 0.12271062 0
1 234434020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.976;LDAF=0.2868;AVGPOST=0.9867;RSQ=0.9761;ERATE=0.0005;THETA=0.0082;AC=620;AN=2184 GT:DS:GL:BD 0.28388280 0
1 234434072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.988;LDAF=0.1291;AVGPOST=0.9968;RSQ=0.9890;ERATE=0.0005;THETA=0.0033;AC=282;AN=2184 GT:DS:GL:BD 0.12912089 0
1 234434120 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.984;LDAF=0.7334;AVGPOST=0.9922;RSQ=0.9849;ERATE=0.0003;THETA=0.0010;AC=1604;AN=2184 GT:DS:GL:BD 0.73443222 1
1 234434158 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.7646;AVGPOST=0.9941;RSQ=0.9874;ERATE=0.0006;THETA=0.0019;AC=1670;AN=2184 GT:DS:GL:BD 0.76465201 1
1 234434200 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.846;LDAF=0.0119;AVGPOST=0.9982;RSQ=0.9438;ERATE=0.0004;THETA=0.0029;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234434227 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8216;ERATE=0.0004;THETA=0.0055;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234434241 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234434296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0609;AVGPOST=0.9989;RSQ=0.9920;ERATE=0.0003;THETA=0.0011;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 234434356 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.743;LDAF=0.0028;AVGPOST=0.9977;RSQ=0.6860;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234434376 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234434405 . TG T 2528 PASS INDEL;BAVGPOST=0.998;BRSQ=0.948;LDAF=0.0192;AVGPOST=0.9968;RSQ=0.9319;ERATE=0.0006;THETA=0.0005;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234434526 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234434574 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.961;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9836;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234434706 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.577;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.5157;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234434719 . T TTTCCAG 132 PASS INDEL;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7366;ERATE=0.0004;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234434838 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8648;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234434981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0019;AVGPOST=0.9985;RSQ=0.6690;ERATE=0.0010;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234435012 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0066;AVGPOST=0.9996;RSQ=0.9709;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234435076 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0033;AVGPOST=0.9990;RSQ=0.9110;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234435271 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0379;AVGPOST=0.9981;RSQ=0.9800;ERATE=0.0003;THETA=0.0002;AC=82;AN=2184 GT:DS:GL:BD 0.03754579 0
1 234435321 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.968;BRSQ=0.938;LDAF=0.6965;AVGPOST=0.9690;RSQ=0.9465;ERATE=0.0032;THETA=0.0016;AC=1546;AN=2184 GT:DS:GL:BD 0.70787543 1
1 234435408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.942;BRSQ=0.884;LDAF=0.6418;AVGPOST=0.9238;RSQ=0.8748;ERATE=0.0125;THETA=0.0008;AC=1437;AN=2184 GT:DS:GL:BD 0.65796703 1
1 234435529 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0072;AVGPOST=0.9972;RSQ=0.8405;ERATE=0.0005;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234435569 . A AG 288 PASS INDEL;BAVGPOST=0.994;BRSQ=0.604;LDAF=0.0084;AVGPOST=0.9907;RSQ=0.5605;ERATE=0.0008;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234435620 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.416;LDAF=0.0022;AVGPOST=0.9982;RSQ=0.6679;ERATE=0.0006;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234435668 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.7743;AVGPOST=0.9953;RSQ=0.9891;ERATE=0.0009;THETA=0.0002;AC=1695;AN=2184 GT:DS:GL:BD 0.77609891 1
1 234435779 rs35822885 T TA 26597 PASS INDEL;BAVGPOST=0.984;BRSQ=0.973;LDAF=0.3541;AVGPOST=0.9718;RSQ=0.9557;ERATE=0.0043;THETA=0.0004;AC=766;AN=2184 GT:DS:GL:BD 0.35073259 0
1 234435792 . CTA C 1518 PASS INDEL;BAVGPOST=0.996;BRSQ=0.912;LDAF=0.0252;AVGPOST=0.9971;RSQ=0.9440;ERATE=0.0010;THETA=0.0006;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234435865 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.6099;AVGPOST=0.9977;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 234435958 . TG T 197 PASS INDEL;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0047;AVGPOST=0.9972;RSQ=0.7610;ERATE=0.0008;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234435961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5800;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234436023 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0777;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234436039 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9996;RSQ=0.8315;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234436058 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6372;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234436133 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7834;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234436363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9451;ERATE=0.0003;THETA=0.0030;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234436439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6639;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234436476 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234436966 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.8256;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234437000 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234437007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1700;AVGPOST=0.9960;RSQ=0.9903;ERATE=0.0004;THETA=0.0006;AC=368;AN=2184 GT:DS:GL:BD 0.16849817 0
1 234437045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7193;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234437141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234437163 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.6847;AVGPOST=0.9986;RSQ=0.9973;ERATE=0.0006;THETA=0.0003;AC=1496;AN=2184 GT:DS:GL:BD 0.68498170 1
1 234437198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0070;AVGPOST=0.9979;RSQ=0.8810;ERATE=0.0003;THETA=0.0015;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234437216 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234437291 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0782;AVGPOST=0.9997;RSQ=0.9980;ERATE=0.0003;THETA=0.0002;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 234437314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6338;AVGPOST=0.9988;RSQ=0.9979;ERATE=0.0003;THETA=0.0003;AC=1385;AN=2184 GT:DS:GL:BD 0.63415754 1
1 234437386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7301;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234437449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234437452 . TC T 91 PASS INDEL;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234437468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234437534 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.761;LDAF=0.0030;AVGPOST=0.9983;RSQ=0.7340;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234437604 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0775;AVGPOST=0.9993;RSQ=0.9960;ERATE=0.0003;THETA=0.0005;AC=169;AN=2184 GT:DS:GL:BD 0.07738096 0
1 234437621 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7143;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0004;THETA=0.0003;AC=1562;AN=2184 GT:DS:GL:BD 0.71520144 1
1 234437652 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234437672 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234437700 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234437703 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234437720 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0117;AVGPOST=0.9992;RSQ=0.9764;ERATE=0.0003;THETA=0.0004;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234437723 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9472;ERATE=0.0006;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234437741 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.6002;AVGPOST=0.9950;RSQ=0.9914;ERATE=0.0026;THETA=0.0004;AC=1313;AN=2184 GT:DS:GL:BD 0.60119045 1
1 234437759 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.837;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.7380;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234437776 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234437789 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8845;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234437794 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0013;AVGPOST=0.9990;RSQ=0.7000;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234437851 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.7729;AVGPOST=0.9963;RSQ=0.9922;ERATE=0.0004;THETA=0.0002;AC=1690;AN=2184 GT:DS:GL:BD 0.77380955 1
1 234437896 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9996;RSQ=0.9478;ERATE=0.0004;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234437913 . TG T 16303 PASS INDEL;BAVGPOST=0.835;BRSQ=0.710;LDAF=0.6153;AVGPOST=0.8072;RSQ=0.7135;ERATE=0.0483;THETA=0.0002;AC=1438;AN=2184 GT:DS:GL:BD 0.65842491 1
1 234437920 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0049;AVGPOST=0.9984;RSQ=0.8667;ERATE=0.0013;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234437970 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.788;LDAF=0.0025;AVGPOST=0.9986;RSQ=0.7734;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234438033 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8330;ERATE=0.0005;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234438210 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234438235 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.7737;AVGPOST=0.9979;RSQ=0.9953;ERATE=0.0005;THETA=0.0003;AC=1693;AN=2184 GT:DS:GL:BD 0.77518314 1
1 234438307 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0038;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234438327 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6100;AVGPOST=0.9976;RSQ=0.9963;ERATE=0.0005;THETA=0.0005;AC=1332;AN=2184 GT:DS:GL:BD 0.60989010 1
1 234438359 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234438365 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234438395 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234438434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0782;AVGPOST=0.9995;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 234438475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.4993;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234438547 . GCTGT G 95 PASS INDEL;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0034;AVGPOST=0.9963;RSQ=0.6320;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234438718 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234438746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0034;AVGPOST=0.9964;RSQ=0.5842;ERATE=0.0018;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234438836 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5754;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234438877 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0110;AVGPOST=0.9991;RSQ=0.9725;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234439133 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.6102;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234439134 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6690;AVGPOST=0.9988;RSQ=0.9977;ERATE=0.0004;THETA=0.0002;AC=1462;AN=2184 GT:DS:GL:BD 0.66941392 1
1 234439373 . TGG T 64 PASS INDEL;BAVGPOST=0.999;BRSQ=0.717;LDAF=0.0073;AVGPOST=0.9894;RSQ=0.4807;ERATE=0.0026;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234439388 . C CT 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.3693;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234439440 . TGTG T 131 PASS INDEL;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6243;ERATE=0.0007;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234439555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7880;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234439595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.6047;AVGPOST=0.9991;RSQ=0.9984;ERATE=0.0004;THETA=0.0002;AC=1321;AN=2184 GT:DS:GL:BD 0.60485345 1
1 234439596 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0038;AVGPOST=0.9998;RSQ=0.9710;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234439718 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6570;AVGPOST=0.9989;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=1436;AN=2184 GT:DS:GL:BD 0.65750915 1
1 234439772 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.809;LDAF=0.0134;AVGPOST=0.9928;RSQ=0.7856;ERATE=0.0006;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234439787 . CCTT C 6003 PASS INDEL;BAVGPOST=0.697;BRSQ=0.438;LDAF=0.3488;AVGPOST=0.7284;RSQ=0.5058;ERATE=0.0454;THETA=0.0002;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234439804 rs67057516 CT C 6626 PASS INDEL;BAVGPOST=0.765;BRSQ=0.502;LDAF=0.2950;AVGPOST=0.7727;RSQ=0.5361;ERATE=0.0407;THETA=0.0024;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 234439916 . A AT 36 PASS INDEL;BAVGPOST=0.989;BRSQ=0.530;LDAF=0.0229;AVGPOST=0.9710;RSQ=0.4807;ERATE=0.0068;THETA=0.0003;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234440120 . GCTGGT G 30 PASS INDEL;BAVGPOST=0.999;BRSQ=0.798;LDAF=0.0039;AVGPOST=0.9946;RSQ=0.3768;ERATE=0.0014;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234440121 . CTGGTCT C 186 PASS INDEL;BAVGPOST=1.000;BRSQ=0.800;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7305;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234440152 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0043;AVGPOST=0.9986;RSQ=0.8789;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234440156 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.888;LDAF=0.0590;AVGPOST=0.9893;RSQ=0.9292;ERATE=0.0003;THETA=0.0004;AC=123;AN=2184 GT:DS:GL:BD 0.05631868 0
1 234440198 rs71576413 T TATATC 122212 PASS INDEL;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.7773;AVGPOST=0.9945;RSQ=0.9873;ERATE=0.0008;THETA=0.0012;AC=1703;AN=2184 GT:DS:GL:BD 0.77976191 1
1 234440309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.885;LDAF=0.0035;AVGPOST=0.9975;RSQ=0.7315;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234440779 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.474;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4438;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234440844 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.985;LDAF=0.0169;AVGPOST=0.9994;RSQ=0.9857;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234440981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234441050 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6377;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234441093 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6575;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234441194 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0036;AVGPOST=0.9993;RSQ=0.9161;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234441214 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.625;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4867;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234441279 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0169;AVGPOST=0.9987;RSQ=0.9671;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234441323 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.855;LDAF=0.0641;AVGPOST=0.9873;RSQ=0.9194;ERATE=0.0006;THETA=0.0004;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 234441377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.795;LDAF=0.0020;AVGPOST=0.9974;RSQ=0.5284;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234441490 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0037;AVGPOST=0.9999;RSQ=0.9882;ERATE=0.0003;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234441506 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6008;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234441526 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0601;AVGPOST=0.9985;RSQ=0.9893;ERATE=0.0003;THETA=0.0002;AC=132;AN=2184 GT:DS:GL:BD 0.06043956 0
1 234441544 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234441583 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.925;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234441749 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.8078;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234441863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234441901 . G GT 58 PASS INDEL;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5492;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234441997 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0039;AVGPOST=0.9987;RSQ=0.8667;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234442031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0017;AVGPOST=0.9986;RSQ=0.6937;ERATE=0.0005;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234442032 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0470;AVGPOST=0.9980;RSQ=0.9839;ERATE=0.0003;THETA=0.0002;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 234442044 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0042;AVGPOST=0.9999;RSQ=0.9843;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234442117 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9120;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234442257 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1759;AVGPOST=0.9960;RSQ=0.9901;ERATE=0.0005;THETA=0.0005;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 234442327 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.610;LDAF=0.0019;AVGPOST=0.9979;RSQ=0.5858;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234442376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6392;AVGPOST=0.9945;RSQ=0.9908;ERATE=0.0006;THETA=0.0008;AC=1398;AN=2184 GT:DS:GL:BD 0.64010990 1
1 234442434 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.903;LDAF=0.0037;AVGPOST=0.9995;RSQ=0.9417;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234442457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.990;LDAF=0.0711;AVGPOST=0.9979;RSQ=0.9900;ERATE=0.0006;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234442504 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.958;LDAF=0.0082;AVGPOST=0.9986;RSQ=0.9330;ERATE=0.0003;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234442539 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0465;AVGPOST=0.9994;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 234442556 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5900;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234442591 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0105;AVGPOST=0.9997;RSQ=0.9880;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234442628 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.687;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6590;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234442643 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0289;AVGPOST=0.9989;RSQ=0.9840;ERATE=0.0005;THETA=0.0006;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 234442666 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0040;AVGPOST=0.9989;RSQ=0.8888;ERATE=0.0005;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234442786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9529;ERATE=0.0003;THETA=0.0006;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234443174 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0189;AVGPOST=0.9996;RSQ=0.9918;ERATE=0.0003;THETA=0.0003;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234443270 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.881;LDAF=0.0052;AVGPOST=0.9984;RSQ=0.8682;ERATE=0.0004;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234443312 . TTCC T 584 PASS INDEL;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0033;AVGPOST=0.9973;RSQ=0.6685;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234443438 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7286;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234443589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9988;RSQ=0.9317;ERATE=0.0004;THETA=0.0002;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234443658 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5722;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234443698 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0026;AVGPOST=0.9992;RSQ=0.8966;ERATE=0.0003;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234443721 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6818;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234443774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234443789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8455;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234443835 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9596;ERATE=0.0004;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234443836 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234443838 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0077;AVGPOST=0.9990;RSQ=0.9435;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234443935 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.801;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7878;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234443974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.8145;AVGPOST=0.9951;RSQ=0.9878;ERATE=0.0004;THETA=0.0022;AC=1781;AN=2184 GT:DS:GL:BD 0.81547618 1
1 234444027 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0021;AVGPOST=0.9988;RSQ=0.7512;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234444194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.749;LDAF=0.0117;AVGPOST=0.9936;RSQ=0.7937;ERATE=0.0005;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234444208 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.846;LDAF=0.0033;AVGPOST=0.9971;RSQ=0.6545;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234444268 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0022;AVGPOST=0.9977;RSQ=0.5972;ERATE=0.0004;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234444315 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0638;AVGPOST=0.9961;RSQ=0.9772;ERATE=0.0003;THETA=0.0004;AC=138;AN=2184 GT:DS:GL:BD 0.06318682 0
1 234444569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0128;AVGPOST=0.9990;RSQ=0.9679;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234444621 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234444634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.932;LDAF=0.0104;AVGPOST=0.9995;RSQ=0.9803;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234444741 . TG T 13 PASS INDEL;BAVGPOST=0.999;BRSQ=0.647;LDAF=0.0015;AVGPOST=0.9984;RSQ=0.5753;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234444823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234444954 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234445410 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4723;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234445444 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.835;LDAF=0.0169;AVGPOST=0.9930;RSQ=0.8701;ERATE=0.0004;THETA=0.0005;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234445535 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.907;LDAF=0.0203;AVGPOST=0.9950;RSQ=0.9207;ERATE=0.0003;THETA=0.0010;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234445539 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.907;LDAF=0.0203;AVGPOST=0.9949;RSQ=0.9202;ERATE=0.0003;THETA=0.0008;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234445708 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7102;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234445709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8417;ERATE=0.0011;THETA=0.0046;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234445934 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8825;ERATE=0.0005;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234445985 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8318;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234446151 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0085;AVGPOST=0.9985;RSQ=0.9348;ERATE=0.0003;THETA=0.0003;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234446198 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0013;AVGPOST=0.9994;RSQ=0.7995;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234446310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6473;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234446452 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.858;LDAF=0.0032;AVGPOST=0.9978;RSQ=0.7634;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234446541 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5614;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234446544 . A AT 145 PASS INDEL;BAVGPOST=0.995;BRSQ=0.512;LDAF=0.0081;AVGPOST=0.9892;RSQ=0.5047;ERATE=0.0012;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234446822 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234446823 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9994;RSQ=0.9436;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234446916 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.940;LDAF=0.0018;AVGPOST=0.9995;RSQ=0.8808;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234446962 . TCTC T 127 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8187;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234446965 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0081;AVGPOST=0.9986;RSQ=0.9283;ERATE=0.0003;THETA=0.0006;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234447011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8427;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234447088 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9282;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234447097 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234447098 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1801;AVGPOST=0.9967;RSQ=0.9924;ERATE=0.0005;THETA=0.0004;AC=391;AN=2184 GT:DS:GL:BD 0.17902930 0
1 234447109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.814;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234447209 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9604;ERATE=0.0003;THETA=0.0041;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234447306 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234447379 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0046;AVGPOST=0.9998;RSQ=0.9810;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234447432 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.4117;AVGPOST=0.9961;RSQ=0.9938;ERATE=0.0005;THETA=0.0103;AC=899;AN=2184 GT:DS:GL:BD 0.41163003 0
1 234447761 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0929;AVGPOST=0.9997;RSQ=0.9983;ERATE=0.0003;THETA=0.0019;AC=203;AN=2184 GT:DS:GL:BD 0.09294872 0
1 234447967 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.756;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5865;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234448045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6334;ERATE=0.0006;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234448084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234448093 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.948;LDAF=0.0260;AVGPOST=0.9968;RSQ=0.9494;ERATE=0.0003;THETA=0.0009;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234448169 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1298;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0018;AC=284;AN=2184 GT:DS:GL:BD 0.13003664 0
1 234448189 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.7031;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234448256 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2818;AVGPOST=0.9975;RSQ=0.9964;ERATE=0.0004;THETA=0.0005;AC=614;AN=2184 GT:DS:GL:BD 0.28113553 0
1 234448410 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.991;LDAF=0.6229;AVGPOST=0.9945;RSQ=0.9908;ERATE=0.0009;THETA=0.0002;AC=1362;AN=2184 GT:DS:GL:BD 0.62362635 1
1 234448453 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2061;AVGPOST=0.9968;RSQ=0.9929;ERATE=0.0003;THETA=0.0002;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 234448455 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234448505 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0032;AVGPOST=0.9991;RSQ=0.8950;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234448530 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1040;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0003;THETA=0.0003;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 234448588 . G GT 48 PASS INDEL;BAVGPOST=0.992;BRSQ=0.625;LDAF=0.0222;AVGPOST=0.9750;RSQ=0.5429;ERATE=0.0066;THETA=0.0008;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234448691 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.834;LDAF=0.0030;AVGPOST=0.9978;RSQ=0.7193;ERATE=0.0010;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234448834 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234448900 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0051;AVGPOST=0.9980;RSQ=0.8233;ERATE=0.0004;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234448901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.840;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234448912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234448915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5924;AVGPOST=0.9943;RSQ=0.9909;ERATE=0.0005;THETA=0.0001;AC=1295;AN=2184 GT:DS:GL:BD 0.59294873 1
1 234448921 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.768;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.4769;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234448956 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8710;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234448969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.7735;AVGPOST=0.9959;RSQ=0.9913;ERATE=0.0003;THETA=0.0009;AC=1691;AN=2184 GT:DS:GL:BD 0.77426738 1
1 234449078 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234449127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.739;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5803;ERATE=0.0003;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234449357 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2005;AVGPOST=0.9951;RSQ=0.9901;ERATE=0.0003;THETA=0.0002;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 234449433 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.923;LDAF=0.0270;AVGPOST=0.9895;RSQ=0.8473;ERATE=0.0022;THETA=0.0052;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234449506 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234449697 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.5069;AVGPOST=0.9973;RSQ=0.9960;ERATE=0.0004;THETA=0.0036;AC=1110;AN=2184 GT:DS:GL:BD 0.50824177 1
1 234449742 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.5644;AVGPOST=0.9902;RSQ=0.9847;ERATE=0.0029;THETA=0.0018;AC=1233;AN=2184 GT:DS:GL:BD 0.56456041 1
1 234449799 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7821;ERATE=0.0004;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234449906 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0071;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234449908 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.5048;AVGPOST=0.9939;RSQ=0.9910;ERATE=0.0005;THETA=0.0095;AC=1103;AN=2184 GT:DS:GL:BD 0.50503665 1
1 234449987 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.977;LDAF=0.6794;AVGPOST=0.9827;RSQ=0.9708;ERATE=0.0028;THETA=0.0005;AC=1485;AN=2184 GT:DS:GL:BD 0.67994505 1
1 234449994 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.979;LDAF=0.3537;AVGPOST=0.9838;RSQ=0.9742;ERATE=0.0065;THETA=0.0012;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234450009 rs59665540 A AC 12532 PASS INDEL;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0829;AVGPOST=0.9964;RSQ=0.9833;ERATE=0.0006;THETA=0.0031;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 234450022 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234450035 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7747;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234450079 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8058;ERATE=0.0004;THETA=0.0028;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234450177 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6920;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234450272 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.882;LDAF=0.0212;AVGPOST=0.9947;RSQ=0.9076;ERATE=0.0004;THETA=0.0021;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234450288 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.990;LDAF=0.6867;AVGPOST=0.9915;RSQ=0.9855;ERATE=0.0006;THETA=0.0010;AC=1504;AN=2184 GT:DS:GL:BD 0.68864471 1
1 234450375 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.976;LDAF=0.4090;AVGPOST=0.9877;RSQ=0.9829;ERATE=0.0022;THETA=0.0068;AC=900;AN=2184 GT:DS:GL:BD 0.41208792 0
1 234450376 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0001;AVGPOST=0.9998;RSQ=0.0498;ERATE=0.0003;THETA=0.0023;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234450485 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0330;AVGPOST=0.9998;RSQ=0.9974;ERATE=0.0003;THETA=0.0004;AC=72;AN=2184 GT:DS:GL:BD 0.03296703 0
1 234450643 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.694;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7608;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234450652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.6017;AVGPOST=0.9972;RSQ=0.9958;ERATE=0.0005;THETA=0.0007;AC=1317;AN=2184 GT:DS:GL:BD 0.60302198 1
1 234450854 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0566;AVGPOST=0.9987;RSQ=0.9922;ERATE=0.0003;THETA=0.0002;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 234450855 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234450871 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.881;LDAF=0.0067;AVGPOST=0.9976;RSQ=0.8481;ERATE=0.0005;THETA=0.0018;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234450963 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.5986;AVGPOST=0.9931;RSQ=0.9901;ERATE=0.0022;THETA=0.0039;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 234450998 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234451011 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0102;AVGPOST=0.9996;RSQ=0.9827;ERATE=0.0003;THETA=0.0012;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234451056 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0561;AVGPOST=0.9982;RSQ=0.9889;ERATE=0.0003;THETA=0.0036;AC=122;AN=2184 GT:DS:GL:BD 0.05586081 0
1 234451059 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0318;AVGPOST=0.9993;RSQ=0.9912;ERATE=0.0003;THETA=0.0012;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 234451112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234451146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.990;LDAF=0.3533;AVGPOST=0.9943;RSQ=0.9916;ERATE=0.0003;THETA=0.0004;AC=776;AN=2184 GT:DS:GL:BD 0.35531136 0
1 234451159 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3879;AVGPOST=0.9945;RSQ=0.9920;ERATE=0.0003;THETA=0.0075;AC=852;AN=2184 GT:DS:GL:BD 0.39010990 0
1 234451251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6243;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234451414 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.987;LDAF=0.0541;AVGPOST=0.9977;RSQ=0.9852;ERATE=0.0003;THETA=0.0116;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234451435 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6659;ERATE=0.0003;THETA=0.0092;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234451609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8702;ERATE=0.0004;THETA=0.0095;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234451676 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234451884 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.712;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0065;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234451937 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9517;ERATE=0.0003;THETA=0.0012;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234452070 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7619;ERATE=0.0004;THETA=0.0143;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234452096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234452263 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0588;AVGPOST=0.9993;RSQ=0.9955;ERATE=0.0003;THETA=0.0054;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234452284 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0073;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234452306 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0015;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234452311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0083;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234452338 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0128;AVGPOST=0.9999;RSQ=0.9967;ERATE=0.0004;THETA=0.0036;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234452356 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234452416 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234452425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234452477 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9904;ERATE=0.0003;THETA=0.0145;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234452492 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0233;AVGPOST=0.9997;RSQ=0.9957;ERATE=0.0003;THETA=0.0065;AC=51;AN=2184 GT:DS:GL:BD 0.02335165 0
1 234452542 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1067;AVGPOST=0.9995;RSQ=0.9985;ERATE=0.0003;THETA=0.0034;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 234452622 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0075;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234452638 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234452754 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234452808 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0712;AVGPOST=0.9993;RSQ=0.9967;ERATE=0.0003;THETA=0.0010;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234452832 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0018;AVGPOST=0.9999;RSQ=0.9768;ERATE=0.0003;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234452869 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234452909 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0223;AVGPOST=0.9997;RSQ=0.9944;ERATE=0.0003;THETA=0.0008;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234452946 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0223;AVGPOST=0.9998;RSQ=0.9959;ERATE=0.0003;THETA=0.0024;AC=49;AN=2184 GT:DS:GL:BD 0.02243590 0
1 234452980 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0695;AVGPOST=0.9986;RSQ=0.9923;ERATE=0.0003;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 234453046 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0442;AVGPOST=0.9985;RSQ=0.9882;ERATE=0.0003;THETA=0.0004;AC=98;AN=2184 GT:DS:GL:BD 0.04487180 0
1 234453130 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.925;LDAF=0.0265;AVGPOST=0.9947;RSQ=0.9205;ERATE=0.0003;THETA=0.0003;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234453305 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234453351 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0021;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234453425 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0221;AVGPOST=0.9996;RSQ=0.9916;ERATE=0.0003;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234453470 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234453645 . C CA 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.4611;ERATE=0.0004;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234453700 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9647;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234453808 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7631;ERATE=0.0011;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234453837 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5788;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234453920 . TC T 815 PASS INDEL;BAVGPOST=0.998;BRSQ=0.909;LDAF=0.0098;AVGPOST=0.9974;RSQ=0.8840;ERATE=0.0004;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234453991 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234454053 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0498;AVGPOST=0.9993;RSQ=0.9944;ERATE=0.0003;THETA=0.0006;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234454074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234454148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234454214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234454405 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.9913;AVGPOST=0.9998;RSQ=0.9899;ERATE=0.0003;THETA=0.0007;AC=2166;AN=2184 GT:DS:GL:BD 0.99175823 1
1 234454412 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0013;AVGPOST=1.0000;RSQ=0.9839;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234454477 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234454506 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234454808 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234454889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234454895 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9141;ERATE=0.0007;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234454931 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234454943 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.669;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234454980 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234455065 . T TGTC 14073 PASS INDEL;BAVGPOST=0.995;BRSQ=0.970;LDAF=0.0759;AVGPOST=0.9994;RSQ=0.9961;ERATE=0.0004;THETA=0.0001;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 234455148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6229;AVGPOST=0.9968;RSQ=0.9947;ERATE=0.0006;THETA=0.0004;AC=1361;AN=2184 GT:DS:GL:BD 0.62316847 1
1 234455173 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.4963;ERATE=0.0006;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234455328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.541;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6432;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234455332 rs113189403 CA C 6488 PASS INDEL;BAVGPOST=0.996;BRSQ=0.979;LDAF=0.0755;AVGPOST=0.9952;RSQ=0.9738;ERATE=0.0019;THETA=0.0005;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 234455355 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.0762;AVGPOST=0.9989;RSQ=0.9952;ERATE=0.0003;THETA=0.0002;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 234455415 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7928;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234455449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234455458 . C CAA 965 PASS INDEL;BAVGPOST=0.971;BRSQ=0.702;LDAF=0.0510;AVGPOST=0.9684;RSQ=0.7669;ERATE=0.0049;THETA=0.0032;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 234455580 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0585;AVGPOST=0.9999;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234455658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0042;AVGPOST=0.9997;RSQ=0.9688;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234455694 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234455821 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0037;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234455926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234455954 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234455961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0092;AVGPOST=1.0000;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234456021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0452;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234456061 . TAC T 252 PASS INDEL;BAVGPOST=0.983;BRSQ=0.687;LDAF=0.0365;AVGPOST=0.9702;RSQ=0.6469;ERATE=0.0189;THETA=0.0002;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 234456070 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0082;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234456129 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0012;AVGPOST=0.9997;RSQ=0.9127;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234456245 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3819;AVGPOST=0.9990;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=835;AN=2184 GT:DS:GL:BD 0.38232601 0
1 234456331 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0673;AVGPOST=0.9998;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234456364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234456386 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0035;AVGPOST=0.9995;RSQ=0.9323;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234456416 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234456420 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234456434 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.5767;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234456465 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3811;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0003;THETA=0.0004;AC=833;AN=2184 GT:DS:GL:BD 0.38141027 0
1 234456483 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234456592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.743;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.5772;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234456595 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0765;AVGPOST=0.9993;RSQ=0.9961;ERATE=0.0003;THETA=0.0004;AC=167;AN=2184 GT:DS:GL:BD 0.07646520 0
1 234456792 rs60364575 C CA 6970 PASS INDEL;BAVGPOST=0.971;BRSQ=0.845;LDAF=0.0993;AVGPOST=0.9487;RSQ=0.7945;ERATE=0.0096;THETA=0.0002;AC=180;AN=2184 GT:DS:GL:BD 0.08241758 0
1 234456793 . CA C 44449 PASS INDEL;BAVGPOST=0.979;BRSQ=0.458;LDAF=0.9773;AVGPOST=0.9704;RSQ=0.4663;ERATE=0.0033;THETA=0.0003;AC=2158;AN=2184 GT:DS:GL:BD 0.98809522 1
1 234456842 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.639;LDAF=0.0463;AVGPOST=0.9520;RSQ=0.5603;ERATE=0.0197;THETA=0.0004;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 234456921 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0048;AVGPOST=0.9991;RSQ=0.9323;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234456968 . AGCGGCG A 596 PASS INDEL;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0040;AVGPOST=0.9985;RSQ=0.8108;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234456971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.803;LDAF=0.0059;AVGPOST=0.9987;RSQ=0.9070;ERATE=0.0004;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234456974 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0030;AVGPOST=0.9977;RSQ=0.7020;ERATE=0.0007;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234456977 . AGT A 333 PASS INDEL;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0042;AVGPOST=0.9980;RSQ=0.7786;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234457063 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0794;AVGPOST=0.9997;RSQ=0.9981;ERATE=0.0003;THETA=0.0001;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234457118 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9144;ERATE=0.0007;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234457142 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234457196 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1317;AVGPOST=0.9947;RSQ=0.9827;ERATE=0.0004;THETA=0.0002;AC=287;AN=2184 GT:DS:GL:BD 0.13141026 0
1 234457238 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.819;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5687;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234457266 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0253;AVGPOST=0.9997;RSQ=0.9940;ERATE=0.0003;THETA=0.0002;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234457288 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0459;AVGPOST=0.9987;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=99;AN=2184 GT:DS:GL:BD 0.04532967 0
1 234457367 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7506;ERATE=0.0003;THETA=0.0015;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234457385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0796;AVGPOST=0.9997;RSQ=0.9984;ERATE=0.0003;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234457443 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.646;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234457472 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0801;AVGPOST=0.9989;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234457499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.3832;AVGPOST=0.9947;RSQ=0.9913;ERATE=0.0007;THETA=0.0002;AC=838;AN=2184 GT:DS:GL:BD 0.38369963 0
1 234457580 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0014;AVGPOST=0.9986;RSQ=0.5567;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234457612 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.789;LDAF=0.0125;AVGPOST=0.9943;RSQ=0.8031;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234457823 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0693;AVGPOST=0.9986;RSQ=0.9911;ERATE=0.0005;THETA=0.0004;AC=151;AN=2184 GT:DS:GL:BD 0.06913920 0
1 234457851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0683;AVGPOST=0.9987;RSQ=0.9914;ERATE=0.0005;THETA=0.0001;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234457865 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.590;LDAF=0.0025;AVGPOST=0.9982;RSQ=0.6781;ERATE=0.0006;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234457980 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7016;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234457982 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.706;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6419;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234457994 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1826;AVGPOST=0.9972;RSQ=0.9927;ERATE=0.0004;THETA=0.0004;AC=400;AN=2184 GT:DS:GL:BD 0.18315019 0
1 234458064 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.7132;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234458114 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0704;AVGPOST=0.9977;RSQ=0.9866;ERATE=0.0004;THETA=0.0003;AC=154;AN=2184 GT:DS:GL:BD 0.07051282 0
1 234458115 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.977;LDAF=0.0694;AVGPOST=0.9989;RSQ=0.9932;ERATE=0.0003;THETA=0.0004;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234458176 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0728;AVGPOST=0.9995;RSQ=0.9971;ERATE=0.0004;THETA=0.0005;AC=159;AN=2184 GT:DS:GL:BD 0.07280220 0
1 234458185 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7362;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234458241 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234458280 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9996;RSQ=0.9646;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234458318 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234458357 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0132;AVGPOST=0.9990;RSQ=0.9763;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234458448 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234458474 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0760;AVGPOST=0.9998;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=166;AN=2184 GT:DS:GL:BD 0.07600733 0
1 234458558 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234458668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3785;AVGPOST=0.9992;RSQ=0.9986;ERATE=0.0003;THETA=0.0075;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 234458683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234458854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0151;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0010;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234459018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0006;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234459179 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234459264 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.823;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.7889;ERATE=0.0008;THETA=0.0052;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234459353 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0919;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0010;AC=201;AN=2184 GT:DS:GL:BD 0.09203297 0
1 234459462 . T TTGGA 72 PASS INDEL;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.5934;ERATE=0.0005;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234459577 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.924;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8993;ERATE=0.0003;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234459631 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9505;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234459680 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7709;ERATE=0.0010;THETA=0.0039;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234460155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0004;AVGPOST=0.9991;RSQ=0.3442;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234460276 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0996;AVGPOST=0.9995;RSQ=0.9978;ERATE=0.0003;THETA=0.0006;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 234460285 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0813;AVGPOST=0.9977;RSQ=0.9892;ERATE=0.0004;THETA=0.0016;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 234460387 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9693;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234460481 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0809;AVGPOST=0.9999;RSQ=0.9994;ERATE=0.0003;THETA=0.0005;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 234460515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0809;AVGPOST=0.9995;RSQ=0.9968;ERATE=0.0005;THETA=0.0003;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 234460540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.861;LDAF=0.0017;AVGPOST=0.9995;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234460598 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.986;LDAF=0.0810;AVGPOST=0.9987;RSQ=0.9940;ERATE=0.0003;THETA=0.0015;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 234460607 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0024;AVGPOST=0.9977;RSQ=0.6088;ERATE=0.0010;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234460612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9781;ERATE=0.0003;THETA=0.0022;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234460736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0844;AVGPOST=0.9997;RSQ=0.9982;ERATE=0.0003;THETA=0.0010;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 234460741 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.980;LDAF=0.0809;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0007;AC=177;AN=2184 GT:DS:GL:BD 0.08104396 0
1 234460936 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.851;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9290;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234461084 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0994;AVGPOST=0.9991;RSQ=0.9966;ERATE=0.0003;THETA=0.0019;AC=218;AN=2184 GT:DS:GL:BD 0.09981685 0
1 234461110 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234461183 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0800;AVGPOST=0.9990;RSQ=0.9945;ERATE=0.0003;THETA=0.0049;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 234461269 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.8944;ERATE=0.0003;THETA=0.0062;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234461292 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0082;AVGPOST=0.9991;RSQ=0.9523;ERATE=0.0003;THETA=0.0068;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234461293 . C CA 1495 PASS INDEL;BAVGPOST=0.995;BRSQ=0.984;LDAF=0.0848;AVGPOST=0.9934;RSQ=0.9682;ERATE=0.0006;THETA=0.0014;AC=185;AN=2184 GT:DS:GL:BD 0.08470696 0
1 234461297 rs111292618 A AG 11107 PASS INDEL;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0813;AVGPOST=0.9969;RSQ=0.9844;ERATE=0.0003;THETA=0.0005;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 234461344 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.909;LDAF=0.0147;AVGPOST=0.9982;RSQ=0.9578;ERATE=0.0005;THETA=0.0010;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234461423 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.962;LDAF=0.6808;AVGPOST=0.9826;RSQ=0.9723;ERATE=0.0011;THETA=0.0181;AC=1490;AN=2184 GT:DS:GL:BD 0.68223441 1
1 234461551 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.975;LDAF=0.6868;AVGPOST=0.9852;RSQ=0.9786;ERATE=0.0004;THETA=0.0104;AC=1502;AN=2184 GT:DS:GL:BD 0.68772894 1
1 234461622 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.797;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8338;ERATE=0.0003;THETA=0.0113;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234461633 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.4808;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234461680 . C CA 1982 PASS INDEL;BAVGPOST=0.991;BRSQ=0.869;LDAF=0.0282;AVGPOST=0.9888;RSQ=0.8591;ERATE=0.0016;THETA=0.0261;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234461721 . GGAA G 1075 PASS INDEL;BAVGPOST=0.667;BRSQ=0.112;LDAF=0.3016;AVGPOST=0.6312;RSQ=0.2542;ERATE=0.0400;THETA=0.0123;AC=363;AN=2184 GT:DS:GL:BD 0.16620879 0
1 234461724 . A AGAG 8013 PASS INDEL;BAVGPOST=0.965;BRSQ=0.877;LDAF=0.1652;AVGPOST=0.9475;RSQ=0.8551;ERATE=0.0027;THETA=0.0080;AC=330;AN=2184 GT:DS:GL:BD 0.15109891 0
1 234461727 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.967;BRSQ=0.878;LDAF=0.1571;AVGPOST=0.9601;RSQ=0.8837;ERATE=0.0013;THETA=0.0036;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 234461749 . G GA 571 PASS INDEL;BAVGPOST=0.985;BRSQ=0.621;LDAF=0.0213;AVGPOST=0.9840;RSQ=0.7057;ERATE=0.0005;THETA=0.0046;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234461760 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.944;BRSQ=0.624;LDAF=0.0857;AVGPOST=0.9333;RSQ=0.6442;ERATE=0.0120;THETA=0.0018;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 234461763 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.934;BRSQ=0.615;LDAF=0.1091;AVGPOST=0.9077;RSQ=0.6039;ERATE=0.0234;THETA=0.0071;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234461807 rs72195162 AAAG A 10327 PASS INDEL;BAVGPOST=0.955;BRSQ=0.854;LDAF=0.1417;AVGPOST=0.9464;RSQ=0.8446;ERATE=0.0117;THETA=0.0082;AC=286;AN=2184 GT:DS:GL:BD 0.13095239 0
1 234461970 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0189;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234462020 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8813;ERATE=0.0003;THETA=0.0242;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234462087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.907;LDAF=0.0088;AVGPOST=0.9976;RSQ=0.8947;ERATE=0.0007;THETA=0.0063;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234462088 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.918;LDAF=0.4520;AVGPOST=0.9573;RSQ=0.9393;ERATE=0.0076;THETA=0.0159;AC=983;AN=2184 GT:DS:GL:BD 0.45009157 0
1 234462182 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0062;AVGPOST=0.9988;RSQ=0.9129;ERATE=0.0013;THETA=0.0187;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234462222 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7221;ERATE=0.0003;THETA=0.0273;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234462328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.965;LDAF=0.0828;AVGPOST=0.9903;RSQ=0.9523;ERATE=0.0006;THETA=0.0094;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 234462413 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.910;LDAF=0.2224;AVGPOST=0.9666;RSQ=0.9315;ERATE=0.0021;THETA=0.0110;AC=477;AN=2184 GT:DS:GL:BD 0.21840659 0
1 234462439 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.937;LDAF=0.0278;AVGPOST=0.9940;RSQ=0.9092;ERATE=0.0014;THETA=0.0092;AC=58;AN=2184 GT:DS:GL:BD 0.02655678 0
1 234462506 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.664;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6314;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234462562 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.858;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7740;ERATE=0.0004;THETA=0.0070;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234462584 . C CTT 9343 PASS INDEL;BAVGPOST=0.991;BRSQ=0.945;LDAF=0.0631;AVGPOST=0.9881;RSQ=0.9236;ERATE=0.0010;THETA=0.0028;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 234462683 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0015;AVGPOST=0.9996;RSQ=0.8835;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234462694 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0031;AVGPOST=0.9982;RSQ=0.7770;ERATE=0.0004;THETA=0.0079;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234463072 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0589;AVGPOST=0.9988;RSQ=0.9909;ERATE=0.0003;THETA=0.0009;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234463154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.816;LDAF=0.0030;AVGPOST=0.9975;RSQ=0.6615;ERATE=0.0007;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234463201 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.660;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4384;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234463223 . T TGCCTCCCTCA 36003 PASS INDEL;BAVGPOST=0.935;BRSQ=0.857;LDAF=0.2294;AVGPOST=0.9479;RSQ=0.9058;ERATE=0.0015;THETA=0.0020;AC=521;AN=2184 GT:DS:GL:BD 0.23855311 0
1 234463418 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9991;RSQ=0.7522;ERATE=0.0004;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234463587 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0017;AVGPOST=0.9987;RSQ=0.7656;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234463595 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0022;AVGPOST=0.9976;RSQ=0.5417;ERATE=0.0005;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234463615 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0107;AVGPOST=0.9973;RSQ=0.8966;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234463638 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8653;ERATE=0.0004;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234463640 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.2623;AVGPOST=0.9898;RSQ=0.9818;ERATE=0.0006;THETA=0.0005;AC=575;AN=2184 GT:DS:GL:BD 0.26327839 0
1 234463773 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8902;ERATE=0.0003;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234463825 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4829;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234463834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.833;LDAF=0.0119;AVGPOST=0.9954;RSQ=0.8354;ERATE=0.0005;THETA=0.0011;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234463867 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6197;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234464101 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0048;AVGPOST=0.9971;RSQ=0.7471;ERATE=0.0007;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234464129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0105;AVGPOST=0.9990;RSQ=0.9629;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234464159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.585;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6200;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234464291 . GTT G 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0020;AVGPOST=0.9970;RSQ=0.4000;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234464315 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234464392 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.5963;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234464427 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5097;ERATE=0.0005;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234464471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0095;AVGPOST=0.9989;RSQ=0.9566;ERATE=0.0003;THETA=0.0005;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234464658 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234464679 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234464842 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.742;LDAF=0.0033;AVGPOST=0.9977;RSQ=0.7332;ERATE=0.0003;THETA=0.0007;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234464854 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0248;AVGPOST=0.9980;RSQ=0.9682;ERATE=0.0003;THETA=0.0004;AC=53;AN=2184 GT:DS:GL:BD 0.02426740 0
1 234464934 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8687;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234465087 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0092;AVGPOST=0.9984;RSQ=0.9246;ERATE=0.0004;THETA=0.0003;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234465189 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0018;AVGPOST=0.9981;RSQ=0.6157;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234465303 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0040;AVGPOST=0.9991;RSQ=0.8954;ERATE=0.0004;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234465384 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.748;LDAF=0.0052;AVGPOST=0.9975;RSQ=0.8175;ERATE=0.0004;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234465579 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6440;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234465630 . TCAGAC T 8576 PASS INDEL;BAVGPOST=0.985;BRSQ=0.872;LDAF=0.0534;AVGPOST=0.9918;RSQ=0.9436;ERATE=0.0007;THETA=0.0012;AC=116;AN=2184 GT:DS:GL:BD 0.05311355 0
1 234465678 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.4957;AVGPOST=0.9952;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=1085;AN=2184 GT:DS:GL:BD 0.49679488 0
1 234465912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.967;LDAF=0.0050;AVGPOST=0.9990;RSQ=0.9132;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234466009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6141;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234466032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.6213;ERATE=0.0009;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234466158 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.958;LDAF=0.3101;AVGPOST=0.9886;RSQ=0.9813;ERATE=0.0011;THETA=0.0003;AC=681;AN=2184 GT:DS:GL:BD 0.31181318 0
1 234466163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.487;LDAF=0.0024;AVGPOST=0.9960;RSQ=0.2674;ERATE=0.0008;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234466174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0043;AVGPOST=0.9958;RSQ=0.6411;ERATE=0.0005;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234466448 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0034;AVGPOST=0.9960;RSQ=0.5549;ERATE=0.0005;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234466486 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.943;LDAF=0.0180;AVGPOST=0.9981;RSQ=0.9543;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234466633 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234466682 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234466692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.926;LDAF=0.0090;AVGPOST=0.9957;RSQ=0.8420;ERATE=0.0004;THETA=0.0006;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234466772 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7415;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234466948 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.950;LDAF=0.0226;AVGPOST=0.9975;RSQ=0.9621;ERATE=0.0003;THETA=0.0008;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234466978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234467066 . GCA G 102 PASS INDEL;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7085;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234467205 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0037;AVGPOST=0.9997;RSQ=0.9660;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234467332 . T TG 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234467866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0060;AVGPOST=0.9992;RSQ=0.9498;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234468295 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234468324 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3136;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0009;THETA=0.0004;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 234468403 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234468449 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.799;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234468550 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9692;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234468573 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0094;AVGPOST=0.9991;RSQ=0.9680;ERATE=0.0003;THETA=0.0004;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234468878 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0043;AVGPOST=0.9985;RSQ=0.8747;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234468879 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.1530;AVGPOST=0.9963;RSQ=0.9891;ERATE=0.0004;THETA=0.0002;AC=332;AN=2184 GT:DS:GL:BD 0.15201466 0
1 234469031 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0750;AVGPOST=0.9993;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=164;AN=2184 GT:DS:GL:BD 0.07509158 0
1 234469091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234469163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0580;AVGPOST=0.9962;RSQ=0.9708;ERATE=0.0007;THETA=0.0005;AC=124;AN=2184 GT:DS:GL:BD 0.05677656 0
1 234469198 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0035;AVGPOST=0.9966;RSQ=0.6515;ERATE=0.0005;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234469291 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0035;AVGPOST=0.9970;RSQ=0.6595;ERATE=0.0004;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234469310 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.5046;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234469424 . CG C 876 PASS INDEL;BAVGPOST=0.986;BRSQ=0.819;LDAF=0.0508;AVGPOST=0.9737;RSQ=0.7918;ERATE=0.0026;THETA=0.0005;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234469453 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.972;BRSQ=0.946;LDAF=0.2973;AVGPOST=0.9782;RSQ=0.9669;ERATE=0.0022;THETA=0.0004;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 234469472 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.889;LDAF=0.0058;AVGPOST=0.9984;RSQ=0.8909;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234469473 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8611;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234469483 . G GC 206 PASS INDEL;BAVGPOST=0.999;BRSQ=0.838;LDAF=0.0038;AVGPOST=0.9994;RSQ=0.9230;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234469526 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3285;AVGPOST=0.9938;RSQ=0.9914;ERATE=0.0005;THETA=0.0004;AC=720;AN=2184 GT:DS:GL:BD 0.32967034 0
1 234469868 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0044;AVGPOST=0.9967;RSQ=0.7261;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234469906 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0162;AVGPOST=0.9994;RSQ=0.9827;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234469953 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0026;AVGPOST=0.9977;RSQ=0.7090;ERATE=0.0003;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234470016 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5654;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234470096 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.757;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4728;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234470220 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5513;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234470304 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3087;AVGPOST=0.9973;RSQ=0.9953;ERATE=0.0006;THETA=0.0003;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234470448 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.721;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7981;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234470460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0012;AVGPOST=0.9991;RSQ=0.7172;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234470487 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8368;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234470555 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0035;AVGPOST=0.9982;RSQ=0.8191;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234470586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234470624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234470650 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0024;AVGPOST=0.9981;RSQ=0.6932;ERATE=0.0004;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234470661 . TCA T 10 PASS INDEL;BAVGPOST=0.999;BRSQ=0.604;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5934;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234470673 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0033;AVGPOST=0.9989;RSQ=0.8754;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234470824 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3293;AVGPOST=0.9951;RSQ=0.9923;ERATE=0.0016;THETA=0.0005;AC=719;AN=2184 GT:DS:GL:BD 0.32921246 0
1 234470987 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9995;RSQ=0.8874;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234471040 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7703;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234471124 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234471127 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234471280 . TA T 38 PASS INDEL;BAVGPOST=0.999;BRSQ=0.679;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.6844;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234471288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0160;AVGPOST=0.9998;RSQ=0.9935;ERATE=0.0003;THETA=0.0005;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234471296 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3127;AVGPOST=0.9987;RSQ=0.9979;ERATE=0.0003;THETA=0.0002;AC=685;AN=2184 GT:DS:GL:BD 0.31364468 0
1 234471384 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2516;AVGPOST=0.9988;RSQ=0.9976;ERATE=0.0003;THETA=0.0002;AC=551;AN=2184 GT:DS:GL:BD 0.25228938 0
1 234471508 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6952;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234471570 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0241;AVGPOST=0.9991;RSQ=0.9848;ERATE=0.0003;THETA=0.0003;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234471619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0022;AVGPOST=0.9998;RSQ=0.9570;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234471643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234471935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234471980 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0023;AVGPOST=0.9997;RSQ=0.9458;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234471981 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0174;AVGPOST=0.9999;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234472022 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9993;RSQ=0.4843;ERATE=0.0003;THETA=0.0004;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234472063 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234472115 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234472162 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0135;AVGPOST=0.9982;RSQ=0.9438;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234472193 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.870;LDAF=0.0142;AVGPOST=0.9963;RSQ=0.8937;ERATE=0.0003;THETA=0.0003;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234472220 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.563;LDAF=0.0020;AVGPOST=0.9975;RSQ=0.4688;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234472339 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234472340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9307;ERATE=0.0008;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234472390 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.6162;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234472446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234472477 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0034;AVGPOST=0.9951;RSQ=0.4408;ERATE=0.0007;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234472503 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6327;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234472562 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9257;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234472565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.737;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6271;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234472634 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0018;AVGPOST=0.9989;RSQ=0.7504;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234472715 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8710;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234472778 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1864;AVGPOST=0.9977;RSQ=0.9944;ERATE=0.0005;THETA=0.0005;AC=407;AN=2184 GT:DS:GL:BD 0.18635531 0
1 234472822 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3128;AVGPOST=0.9984;RSQ=0.9970;ERATE=0.0004;THETA=0.0004;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 234472872 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234472873 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234473006 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234473082 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0679;AVGPOST=0.9980;RSQ=0.9887;ERATE=0.0003;THETA=0.0006;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 234473153 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.873;LDAF=0.0049;AVGPOST=0.9985;RSQ=0.8736;ERATE=0.0005;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234473156 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234473176 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8974;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234473183 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8493;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234473187 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9536;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234473321 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0856;AVGPOST=0.9992;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=187;AN=2184 GT:DS:GL:BD 0.08562271 0
1 234473339 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3137;AVGPOST=0.9989;RSQ=0.9983;ERATE=0.0003;THETA=0.0004;AC=687;AN=2184 GT:DS:GL:BD 0.31456044 0
1 234473367 . AG A 48 PASS INDEL;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.5873;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234473418 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7923;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234473562 . C CA 9 PASS INDEL;BAVGPOST=0.998;BRSQ=0.649;LDAF=0.0032;AVGPOST=0.9969;RSQ=0.6099;ERATE=0.0007;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234473606 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0210;AVGPOST=0.9936;RSQ=0.8923;ERATE=0.0006;THETA=0.0013;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234473759 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6555;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234473806 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234473823 rs35947332 TA T 50623 PASS INDEL;BAVGPOST=0.949;BRSQ=0.922;LDAF=0.6799;AVGPOST=0.9236;RSQ=0.9023;ERATE=0.0213;THETA=0.0005;AC=1508;AN=2184 GT:DS:GL:BD 0.69047618 1
1 234473885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0026;AVGPOST=0.9987;RSQ=0.7954;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234473914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2530;AVGPOST=0.9957;RSQ=0.9918;ERATE=0.0005;THETA=0.0003;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 234473915 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234474032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9983;RSQ=0.3064;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234474033 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.693;LDAF=0.0021;AVGPOST=0.9985;RSQ=0.7151;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234474112 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.3791;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234474128 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0177;AVGPOST=0.9989;RSQ=0.9741;ERATE=0.0004;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234474227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.711;LDAF=0.0067;AVGPOST=0.9957;RSQ=0.7355;ERATE=0.0006;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234474412 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0171;AVGPOST=0.9984;RSQ=0.9612;ERATE=0.0005;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234474445 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234474492 rs34770293 GA G 35991 PASS INDEL;BAVGPOST=0.995;BRSQ=0.991;LDAF=0.2536;AVGPOST=0.9926;RSQ=0.9873;ERATE=0.0009;THETA=0.0006;AC=553;AN=2184 GT:DS:GL:BD 0.25320512 0
1 234474606 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5713;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234474774 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0065;AVGPOST=0.9982;RSQ=0.8876;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234474780 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3087;AVGPOST=0.9988;RSQ=0.9978;ERATE=0.0005;THETA=0.0003;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234474877 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7300;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234474891 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0048;AVGPOST=0.9995;RSQ=0.9543;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234474921 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234475224 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.842;LDAF=0.0035;AVGPOST=0.9991;RSQ=0.8930;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234475344 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234475413 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.805;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.7940;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234475665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.895;LDAF=0.0209;AVGPOST=0.9974;RSQ=0.9528;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234475730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3084;AVGPOST=0.9991;RSQ=0.9985;ERATE=0.0003;THETA=0.0003;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234475803 . TA T 931 PASS INDEL;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0156;AVGPOST=0.9996;RSQ=0.9890;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234475832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.6046;AVGPOST=0.9930;RSQ=0.9912;ERATE=0.0006;THETA=0.0002;AC=1322;AN=2184 GT:DS:GL:BD 0.60531133 1
1 234476001 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0742;AVGPOST=0.9994;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=162;AN=2184 GT:DS:GL:BD 0.07417583 0
1 234476032 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.775;LDAF=0.0028;AVGPOST=0.9983;RSQ=0.8029;ERATE=0.0004;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234476218 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.908;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9431;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234476235 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7354;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234476294 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0161;AVGPOST=0.9995;RSQ=0.9865;ERATE=0.0003;THETA=0.0006;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234476355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0122;AVGPOST=0.9989;RSQ=0.9638;ERATE=0.0005;THETA=0.0015;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234476362 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0038;AVGPOST=0.9986;RSQ=0.8743;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234476363 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234476398 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.2644;AVGPOST=0.9974;RSQ=0.9953;ERATE=0.0006;THETA=0.0005;AC=578;AN=2184 GT:DS:GL:BD 0.26465201 0
1 234476791 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0016;AVGPOST=0.9977;RSQ=0.5099;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234476848 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.795;LDAF=0.0023;AVGPOST=0.9993;RSQ=0.8595;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234477152 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.889;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5883;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234477155 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.786;LDAF=0.0020;AVGPOST=0.9986;RSQ=0.7422;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234477165 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3147;AVGPOST=0.9982;RSQ=0.9968;ERATE=0.0006;THETA=0.0004;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 234477224 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.851;LDAF=0.0189;AVGPOST=0.9952;RSQ=0.8929;ERATE=0.0005;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234477306 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.937;LDAF=0.0108;AVGPOST=0.9936;RSQ=0.7704;ERATE=0.0006;THETA=0.0014;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234477350 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0027;AVGPOST=0.9960;RSQ=0.3615;ERATE=0.0007;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234477451 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.683;LDAF=0.0157;AVGPOST=0.9903;RSQ=0.7536;ERATE=0.0008;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234477453 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.851;BRSQ=0.367;LDAF=0.8257;AVGPOST=0.7915;RSQ=0.4192;ERATE=0.0361;THETA=0.0007;AC=1951;AN=2184 GT:DS:GL:BD 0.89331502 1
1 234477666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5646;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234477667 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9183;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234477680 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.960;LDAF=0.1484;AVGPOST=0.9957;RSQ=0.9871;ERATE=0.0005;THETA=0.0007;AC=323;AN=2184 GT:DS:GL:BD 0.14789377 0
1 234477740 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8494;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234477764 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234477831 . C CAGA 264 PASS INDEL;BAVGPOST=0.999;BRSQ=0.883;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.3518;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234477841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.875;LDAF=0.0077;AVGPOST=0.9968;RSQ=0.8699;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234477868 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.971;LDAF=0.0205;AVGPOST=0.9984;RSQ=0.9664;ERATE=0.0004;THETA=0.0002;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234477986 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.812;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.8053;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234477999 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9267;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234478180 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.954;LDAF=0.0263;AVGPOST=0.9970;RSQ=0.9563;ERATE=0.0003;THETA=0.0004;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234478267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0022;AVGPOST=0.9974;RSQ=0.5594;ERATE=0.0006;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234478344 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3327;AVGPOST=0.9914;RSQ=0.9882;ERATE=0.0008;THETA=0.0005;AC=727;AN=2184 GT:DS:GL:BD 0.33287546 0
1 234478376 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7831;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234478378 . T TA 141 PASS INDEL;BAVGPOST=0.999;BRSQ=0.683;LDAF=0.0015;AVGPOST=0.9993;RSQ=0.7971;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234478405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3250;AVGPOST=0.9972;RSQ=0.9960;ERATE=0.0005;THETA=0.0004;AC=712;AN=2184 GT:DS:GL:BD 0.32600734 0
1 234478448 . TAA T 220 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6657;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234478552 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6256;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234478603 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234478692 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6186;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234478813 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.726;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6980;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234478955 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.909;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9654;ERATE=0.0003;THETA=0.0004;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234479002 . A AT 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6388;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234479157 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.816;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.6183;ERATE=0.0006;THETA=0.0025;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234479200 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0005;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234479206 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.841;LDAF=0.0038;AVGPOST=0.9983;RSQ=0.7985;ERATE=0.0004;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234479345 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0050;AVGPOST=0.9991;RSQ=0.9393;ERATE=0.0003;THETA=0.0009;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234479639 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6803;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234479661 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.870;LDAF=0.0028;AVGPOST=0.9989;RSQ=0.8573;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234479662 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8648;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234479715 . A AG 15 PASS INDEL;BAVGPOST=1.000;BRSQ=0.775;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5376;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234479799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7267;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234479805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.821;LDAF=0.0022;AVGPOST=0.9989;RSQ=0.7838;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234479859 . T TTC 239 PASS INDEL;BAVGPOST=0.994;BRSQ=0.529;LDAF=0.0063;AVGPOST=0.9949;RSQ=0.6524;ERATE=0.0007;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234479904 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.981;LDAF=0.0687;AVGPOST=0.9955;RSQ=0.9730;ERATE=0.0004;THETA=0.0005;AC=150;AN=2184 GT:DS:GL:BD 0.06868132 0
1 234480166 . TA T 543 PASS INDEL;BAVGPOST=0.957;BRSQ=0.505;LDAF=0.0587;AVGPOST=0.9312;RSQ=0.5307;ERATE=0.0084;THETA=0.0004;AC=76;AN=2184 GT:DS:GL:BD 0.03479854 0
1 234480219 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0071;AVGPOST=0.9972;RSQ=0.8498;ERATE=0.0007;THETA=0.0008;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234480307 . TG T 604 PASS INDEL;BAVGPOST=0.997;BRSQ=0.918;LDAF=0.0188;AVGPOST=0.9928;RSQ=0.8427;ERATE=0.0006;THETA=0.0006;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234480321 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0570;AVGPOST=0.9975;RSQ=0.9795;ERATE=0.0003;THETA=0.0010;AC=125;AN=2184 GT:DS:GL:BD 0.05723443 0
1 234480364 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.953;LDAF=0.0077;AVGPOST=0.9966;RSQ=0.8426;ERATE=0.0004;THETA=0.0013;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234480375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.733;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8732;ERATE=0.0004;THETA=0.0025;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234480386 . CA C 93 PASS INDEL;BAVGPOST=1.000;BRSQ=0.743;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4595;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234480408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.975;BRSQ=0.961;LDAF=0.3665;AVGPOST=0.9801;RSQ=0.9728;ERATE=0.0009;THETA=0.0006;AC=804;AN=2184 GT:DS:GL:BD 0.36813188 0
1 234480425 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.886;LDAF=0.0116;AVGPOST=0.9969;RSQ=0.8907;ERATE=0.0004;THETA=0.0015;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234480477 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.986;BRSQ=0.984;LDAF=0.6822;AVGPOST=0.9839;RSQ=0.9787;ERATE=0.0009;THETA=0.0006;AC=1499;AN=2184 GT:DS:GL:BD 0.68635529 1
1 234480498 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.994;LDAF=0.3187;AVGPOST=0.9926;RSQ=0.9883;ERATE=0.0005;THETA=0.0116;AC=699;AN=2184 GT:DS:GL:BD 0.32005495 0
1 234480568 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0056;AVGPOST=0.9991;RSQ=0.9525;ERATE=0.0003;THETA=0.0040;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234480904 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.968;LDAF=0.5876;AVGPOST=0.9734;RSQ=0.9659;ERATE=0.0009;THETA=0.0059;AC=1296;AN=2184 GT:DS:GL:BD 0.59340662 1
1 234480905 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5726;ERATE=0.0003;THETA=0.0049;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234480962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.865;LDAF=0.0017;AVGPOST=0.9975;RSQ=0.4156;ERATE=0.0006;THETA=0.0154;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234481018 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0200;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234481064 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0127;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234481220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0016;AVGPOST=0.9984;RSQ=0.5899;ERATE=0.0004;THETA=0.0178;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234481294 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0039;AVGPOST=0.9992;RSQ=0.9045;ERATE=0.0003;THETA=0.0066;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234481299 . C CA 6593 PASS INDEL;BAVGPOST=0.974;BRSQ=0.941;LDAF=0.2074;AVGPOST=0.9742;RSQ=0.9490;ERATE=0.0004;THETA=0.0023;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 234481301 . A AC 34591 PASS INDEL;BAVGPOST=0.976;BRSQ=0.944;LDAF=0.2076;AVGPOST=0.9751;RSQ=0.9518;ERATE=0.0003;THETA=0.0033;AC=448;AN=2184 GT:DS:GL:BD 0.20512821 0
1 234481302 . C CA 9662 PASS INDEL;BAVGPOST=0.976;BRSQ=0.943;LDAF=0.2057;AVGPOST=0.9732;RSQ=0.9475;ERATE=0.0004;THETA=0.0095;AC=446;AN=2184 GT:DS:GL:BD 0.20421246 0
1 234481444 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0108;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234481514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8586;ERATE=0.0003;THETA=0.0205;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234481528 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0013;AVGPOST=0.9998;RSQ=0.9360;ERATE=0.0003;THETA=0.0282;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234481545 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0087;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234481548 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0017;AVGPOST=0.9979;RSQ=0.5083;ERATE=0.0007;THETA=0.0090;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234481555 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.963;BRSQ=0.908;LDAF=0.2097;AVGPOST=0.9609;RSQ=0.9172;ERATE=0.0076;THETA=0.0082;AC=439;AN=2184 GT:DS:GL:BD 0.20100732 0
1 234481678 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.954;BRSQ=0.924;LDAF=0.5913;AVGPOST=0.9527;RSQ=0.9342;ERATE=0.0116;THETA=0.0193;AC=1291;AN=2184 GT:DS:GL:BD 0.59111720 1
1 234481757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.765;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7063;ERATE=0.0003;THETA=0.0068;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234481809 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.897;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0117;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234481824 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.912;LDAF=0.0564;AVGPOST=0.9899;RSQ=0.9276;ERATE=0.0016;THETA=0.0164;AC=119;AN=2184 GT:DS:GL:BD 0.05448718 0
1 234481840 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0034;AVGPOST=0.9988;RSQ=0.8319;ERATE=0.0006;THETA=0.0073;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234481841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0166;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234481885 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.881;LDAF=0.0189;AVGPOST=0.9956;RSQ=0.9025;ERATE=0.0004;THETA=0.0056;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234481897 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0004;THETA=0.0036;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234481904 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0072;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234481941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.804;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6539;ERATE=0.0003;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234481977 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.3758;ERATE=0.0003;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234482010 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.788;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6188;ERATE=0.0003;THETA=0.0129;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234482012 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7117;ERATE=0.0003;THETA=0.0187;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234482040 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.929;LDAF=0.2763;AVGPOST=0.9580;RSQ=0.9293;ERATE=0.0105;THETA=0.0076;AC=589;AN=2184 GT:DS:GL:BD 0.26968864 0
1 234482097 rs56296233 C CAT 70985 PASS INDEL;BAVGPOST=0.922;BRSQ=0.894;LDAF=0.5478;AVGPOST=0.9199;RSQ=0.8995;ERATE=0.0121;THETA=0.0006;AC=1198;AN=2184 GT:DS:GL:BD 0.54853481 1
1 234482172 . ATTAC A 112 PASS INDEL;BAVGPOST=0.999;BRSQ=0.866;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8441;ERATE=0.0004;THETA=0.0061;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234482182 . C CT 97 PASS INDEL;BAVGPOST=0.988;BRSQ=0.536;LDAF=0.0136;AVGPOST=0.9830;RSQ=0.4921;ERATE=0.0052;THETA=0.0088;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234482205 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.948;BRSQ=0.889;LDAF=0.2430;AVGPOST=0.9424;RSQ=0.8907;ERATE=0.0080;THETA=0.0158;AC=511;AN=2184 GT:DS:GL:BD 0.23397435 0
1 234482259 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9087;ERATE=0.0004;THETA=0.0079;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234482267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.571;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.4701;ERATE=0.0005;THETA=0.0215;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234482465 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.896;LDAF=0.0250;AVGPOST=0.9952;RSQ=0.9279;ERATE=0.0003;THETA=0.0009;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234482519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.945;LDAF=0.1849;AVGPOST=0.9793;RSQ=0.9513;ERATE=0.0013;THETA=0.0048;AC=395;AN=2184 GT:DS:GL:BD 0.18086080 0
1 234482540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0127;AVGPOST=0.9989;RSQ=0.9657;ERATE=0.0007;THETA=0.0010;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234482542 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234482652 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.946;LDAF=0.0202;AVGPOST=0.9979;RSQ=0.9552;ERATE=0.0004;THETA=0.0048;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234482770 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0029;AVGPOST=0.9994;RSQ=0.8994;ERATE=0.0004;THETA=0.0011;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234482825 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.845;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0047;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234482837 . G GGTAA 477 PASS INDEL;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0046;AVGPOST=0.9980;RSQ=0.8276;ERATE=0.0004;THETA=0.0024;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234482998 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.837;LDAF=0.0061;AVGPOST=0.9979;RSQ=0.8482;ERATE=0.0004;THETA=0.0054;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234483122 . CAGA C 544 PASS INDEL;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0044;AVGPOST=0.9987;RSQ=0.8633;ERATE=0.0004;THETA=0.0049;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234483277 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7196;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234483334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0197;AVGPOST=0.9976;RSQ=0.9484;ERATE=0.0003;THETA=0.0030;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234483377 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.888;LDAF=0.0157;AVGPOST=0.9952;RSQ=0.8854;ERATE=0.0007;THETA=0.0048;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234483462 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.615;LDAF=0.0058;AVGPOST=0.9922;RSQ=0.4878;ERATE=0.0005;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234483499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.636;LDAF=0.0166;AVGPOST=0.9862;RSQ=0.6610;ERATE=0.0015;THETA=0.0045;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234483503 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.859;LDAF=0.0210;AVGPOST=0.9929;RSQ=0.8652;ERATE=0.0005;THETA=0.0004;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234483563 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.879;LDAF=0.0095;AVGPOST=0.9949;RSQ=0.7908;ERATE=0.0006;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234483565 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.659;LDAF=0.0017;AVGPOST=0.9973;RSQ=0.3715;ERATE=0.0004;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234483576 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.749;LDAF=0.0064;AVGPOST=0.9965;RSQ=0.7792;ERATE=0.0004;THETA=0.0035;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234483587 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.818;LDAF=0.0195;AVGPOST=0.9925;RSQ=0.8473;ERATE=0.0004;THETA=0.0063;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234483605 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.593;LDAF=0.0066;AVGPOST=0.9942;RSQ=0.6904;ERATE=0.0005;THETA=0.0042;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234483610 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.563;LDAF=0.0136;AVGPOST=0.9865;RSQ=0.6281;ERATE=0.0021;THETA=0.0016;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234483622 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.906;LDAF=0.0277;AVGPOST=0.9941;RSQ=0.9162;ERATE=0.0005;THETA=0.0012;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234483730 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.871;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9614;ERATE=0.0003;THETA=0.0009;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234483760 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234483804 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.966;BRSQ=0.938;LDAF=0.3545;AVGPOST=0.9537;RSQ=0.9268;ERATE=0.0066;THETA=0.0055;AC=767;AN=2184 GT:DS:GL:BD 0.35119048 0
1 234483824 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234483851 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7655;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234483995 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.491;LDAF=0.0036;AVGPOST=0.9978;RSQ=0.7679;ERATE=0.0004;THETA=0.0037;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234484103 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.728;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234484116 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.973;LDAF=0.0145;AVGPOST=0.9981;RSQ=0.9438;ERATE=0.0003;THETA=0.0065;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234484264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.6973;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234484327 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.882;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0055;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234484336 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0066;AVGPOST=0.9985;RSQ=0.9053;ERATE=0.0006;THETA=0.0016;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234484393 . TAAG T 223 PASS INDEL;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0019;AVGPOST=0.9989;RSQ=0.7305;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234484471 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.867;LDAF=0.0037;AVGPOST=0.9988;RSQ=0.8575;ERATE=0.0004;THETA=0.0013;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234484492 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.791;LDAF=0.0017;AVGPOST=0.9991;RSQ=0.7518;ERATE=0.0004;THETA=0.0024;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234484494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.582;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6112;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234484537 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.884;LDAF=0.0130;AVGPOST=0.9936;RSQ=0.8078;ERATE=0.0011;THETA=0.0025;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234484555 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0053;AVGPOST=0.9992;RSQ=0.9313;ERATE=0.0005;THETA=0.0055;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234484559 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0035;AVGPOST=0.9994;RSQ=0.9342;ERATE=0.0003;THETA=0.0046;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234484578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.591;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5550;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234484579 . C CA 64 PASS INDEL;BAVGPOST=1.000;BRSQ=0.808;LDAF=0.0008;AVGPOST=0.9990;RSQ=0.4158;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234484630 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0098;AVGPOST=0.9986;RSQ=0.9417;ERATE=0.0005;THETA=0.0019;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234484729 rs111597759 C CATT 840 PASS INDEL;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9180;ERATE=0.0005;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234484918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9244;ERATE=0.0003;THETA=0.0052;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234484929 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234484968 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9800;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234485031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234485054 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0027;AVGPOST=0.9995;RSQ=0.9358;ERATE=0.0003;THETA=0.0019;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234485064 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9395;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234485090 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.941;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234485108 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234485134 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9791;ERATE=0.0003;THETA=0.0021;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234485340 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9918;ERATE=0.0003;THETA=0.0025;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234485341 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0035;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234485429 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234485436 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234485457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0058;AVGPOST=0.9989;RSQ=0.9322;ERATE=0.0004;THETA=0.0017;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234485463 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234485474 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0051;AVGPOST=1.0000;RSQ=0.9957;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234485504 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.868;LDAF=0.0034;AVGPOST=0.9986;RSQ=0.8593;ERATE=0.0004;THETA=0.0015;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234485529 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0160;AVGPOST=0.9988;RSQ=0.9656;ERATE=0.0003;THETA=0.0009;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234485545 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0030;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234485568 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0095;AVGPOST=0.9990;RSQ=0.9610;ERATE=0.0003;THETA=0.0006;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234485601 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234485625 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234485695 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.7162;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234485892 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9789;ERATE=0.0003;THETA=0.0021;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234486049 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0054;AVGPOST=0.9991;RSQ=0.9195;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234486089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0011;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234486204 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0012;AVGPOST=0.9987;RSQ=0.5659;ERATE=0.0004;THETA=0.0033;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234486215 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.848;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6464;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234486238 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9456;ERATE=0.0003;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234486301 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9871;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234486320 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0052;AVGPOST=0.9995;RSQ=0.9588;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234486347 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0052;AVGPOST=0.9993;RSQ=0.9464;ERATE=0.0003;THETA=0.0010;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234486391 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9829;ERATE=0.0003;THETA=0.0027;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234486461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0032;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234486612 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0051;AVGPOST=0.9983;RSQ=0.8835;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234486618 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.830;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.7837;ERATE=0.0003;THETA=0.0031;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234486639 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0050;AVGPOST=0.9994;RSQ=0.9528;ERATE=0.0003;THETA=0.0042;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234486683 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234486779 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6753;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234486894 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9004;ERATE=0.0004;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234486944 . AAC A 12539 PASS INDEL;BAVGPOST=0.945;BRSQ=0.903;LDAF=0.3411;AVGPOST=0.9394;RSQ=0.9068;ERATE=0.0004;THETA=0.0013;AC=738;AN=2184 GT:DS:GL:BD 0.33791208 0
1 234486945 . AC A 36150 PASS INDEL;BAVGPOST=0.955;BRSQ=0.921;LDAF=0.3554;AVGPOST=0.9409;RSQ=0.9113;ERATE=0.0006;THETA=0.0037;AC=765;AN=2184 GT:DS:GL:BD 0.35027471 0
1 234486950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0030;AVGPOST=0.9965;RSQ=0.4982;ERATE=0.0009;THETA=0.0018;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234487074 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6464;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234487182 . A AC 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.824;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7520;ERATE=0.0003;THETA=0.0018;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234487233 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0140;AVGPOST=0.9995;RSQ=0.9835;ERATE=0.0003;THETA=0.0039;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234487434 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0064;AVGPOST=0.9990;RSQ=0.9395;ERATE=0.0004;THETA=0.0085;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234487504 . G GAACA 3901 PASS INDEL;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9836;ERATE=0.0004;THETA=0.0019;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234487530 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.662;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7679;ERATE=0.0004;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234487711 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0138;AVGPOST=0.9997;RSQ=0.9909;ERATE=0.0003;THETA=0.0011;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234487769 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0005;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234487855 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0139;AVGPOST=0.9996;RSQ=0.9881;ERATE=0.0003;THETA=0.0024;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234487861 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.791;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6799;ERATE=0.0004;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234488004 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.746;LDAF=0.0033;AVGPOST=0.9986;RSQ=0.8136;ERATE=0.0003;THETA=0.0014;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234488059 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0064;AVGPOST=0.9983;RSQ=0.9166;ERATE=0.0003;THETA=0.0065;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234488131 . GAA G 269 PASS INDEL;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0016;AVGPOST=0.9992;RSQ=0.7856;ERATE=0.0005;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234488203 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0249;AVGPOST=0.9981;RSQ=0.9704;ERATE=0.0005;THETA=0.0021;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234488277 . A AG 19 PASS INDEL;BAVGPOST=0.999;BRSQ=0.806;LDAF=0.0015;AVGPOST=0.9990;RSQ=0.7328;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234488373 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.810;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.4930;ERATE=0.0004;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234488518 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234488696 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.778;LDAF=0.0036;AVGPOST=0.9974;RSQ=0.7147;ERATE=0.0009;THETA=0.0035;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234488698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.722;LDAF=0.0008;AVGPOST=0.9989;RSQ=0.5121;ERATE=0.0003;THETA=0.0041;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234488824 . AG A 136 PASS INDEL;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234488856 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6164;ERATE=0.0004;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234488955 . T TC 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5418;ERATE=0.0005;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234489002 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0140;AVGPOST=0.9995;RSQ=0.9835;ERATE=0.0003;THETA=0.0071;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234489026 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6019;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234489040 . GAC G 119 PASS INDEL;BAVGPOST=0.998;BRSQ=0.584;LDAF=0.0032;AVGPOST=0.9963;RSQ=0.5392;ERATE=0.0010;THETA=0.0042;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234489158 . TAC T 5 PASS INDEL;BAVGPOST=1.000;BRSQ=0.782;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5377;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234489211 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.824;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0020;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234489232 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.796;LDAF=0.0020;AVGPOST=0.9987;RSQ=0.7230;ERATE=0.0015;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234489299 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0149;AVGPOST=0.9983;RSQ=0.9593;ERATE=0.0003;THETA=0.0038;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234489414 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5220;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234489415 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.936;LDAF=0.0290;AVGPOST=0.9947;RSQ=0.9308;ERATE=0.0005;THETA=0.0008;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 234489493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0019;AVGPOST=0.9988;RSQ=0.7116;ERATE=0.0010;THETA=0.0012;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234489634 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.8075;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234489708 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0038;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234489715 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0070;AVGPOST=0.9992;RSQ=0.9523;ERATE=0.0006;THETA=0.0044;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234489819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234489879 . AAG A 76 PASS INDEL;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8313;ERATE=0.0003;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234490115 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0003;THETA=0.0010;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234490178 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0006;AVGPOST=0.9992;RSQ=0.4975;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234490203 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0252;AVGPOST=0.9995;RSQ=0.9916;ERATE=0.0003;THETA=0.0014;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234490248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234490292 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234490342 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0247;AVGPOST=0.9998;RSQ=0.9960;ERATE=0.0003;THETA=0.0011;AC=54;AN=2184 GT:DS:GL:BD 0.02472528 0
1 234490504 . T TA 12 PASS INDEL;BAVGPOST=0.999;BRSQ=0.595;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5369;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234490507 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6867;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234490631 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0138;AVGPOST=0.9999;RSQ=0.9955;ERATE=0.0003;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234490818 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.3792;AVGPOST=0.9900;RSQ=0.9829;ERATE=0.0004;THETA=0.0006;AC=832;AN=2184 GT:DS:GL:BD 0.38095239 0
1 234490870 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234490898 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0096;AVGPOST=0.9981;RSQ=0.9261;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234490948 . T TTA 1841 PASS INDEL;BAVGPOST=0.986;BRSQ=0.744;LDAF=0.0411;AVGPOST=0.9675;RSQ=0.6678;ERATE=0.0065;THETA=0.0009;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234490954 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.983;BRSQ=0.969;LDAF=0.3795;AVGPOST=0.9896;RSQ=0.9811;ERATE=0.0012;THETA=0.0008;AC=833;AN=2184 GT:DS:GL:BD 0.38141027 0
1 234490955 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.749;LDAF=0.0022;AVGPOST=0.9988;RSQ=0.7817;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234491004 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.7127;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234491032 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234491041 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5722;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234491070 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5223;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234491083 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8439;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234491091 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.956;LDAF=0.0089;AVGPOST=0.9985;RSQ=0.9246;ERATE=0.0004;THETA=0.0005;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234491106 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0137;AVGPOST=0.9998;RSQ=0.9940;ERATE=0.0003;THETA=0.0006;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234491214 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.908;LDAF=0.0140;AVGPOST=0.9983;RSQ=0.9480;ERATE=0.0006;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234491238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.583;LDAF=0.0037;AVGPOST=0.9973;RSQ=0.7026;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234491267 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0118;AVGPOST=0.9981;RSQ=0.9312;ERATE=0.0005;THETA=0.0006;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234491377 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0139;AVGPOST=0.9997;RSQ=0.9894;ERATE=0.0003;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234491429 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0144;AVGPOST=0.9995;RSQ=0.9828;ERATE=0.0003;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234491472 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.833;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7691;ERATE=0.0006;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234491500 . TAAAG T 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.5853;ERATE=0.0005;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234491541 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234491559 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0137;AVGPOST=1.0000;RSQ=0.9985;ERATE=0.0003;THETA=0.0007;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234491742 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0139;AVGPOST=0.9995;RSQ=0.9839;ERATE=0.0004;THETA=0.0008;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234491834 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0130;AVGPOST=0.9977;RSQ=0.9269;ERATE=0.0003;THETA=0.0010;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234491857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234491942 . A AG 42 PASS INDEL;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5389;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234491988 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0019;AVGPOST=0.9992;RSQ=0.8164;ERATE=0.0004;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234492009 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234492059 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.2791;AVGPOST=0.9967;RSQ=0.9930;ERATE=0.0004;THETA=0.0003;AC=609;AN=2184 GT:DS:GL:BD 0.27884614 0
1 234492145 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234492193 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.630;LDAF=0.0023;AVGPOST=0.9989;RSQ=0.7946;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234492231 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9764;ERATE=0.0003;THETA=0.0006;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234492251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0135;AVGPOST=0.9996;RSQ=0.9875;ERATE=0.0003;THETA=0.0007;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234492290 . AG A 73 PASS INDEL;BAVGPOST=1.000;BRSQ=0.856;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6380;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234492323 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0133;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234492563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234492578 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234492600 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0252;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0007;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234492618 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0036;AVGPOST=0.9996;RSQ=0.9594;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234492687 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0030;AVGPOST=0.9984;RSQ=0.7782;ERATE=0.0016;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234492688 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.796;LDAF=0.0063;AVGPOST=0.9970;RSQ=0.8256;ERATE=0.0003;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234492750 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0133;AVGPOST=0.9997;RSQ=0.9892;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234492787 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0117;AVGPOST=0.9994;RSQ=0.9840;ERATE=0.0003;THETA=0.0007;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234492806 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6130;ERATE=0.0006;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234492851 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.970;LDAF=0.0133;AVGPOST=0.9995;RSQ=0.9848;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234492869 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0302;AVGPOST=0.9982;RSQ=0.9781;ERATE=0.0003;THETA=0.0009;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 234492886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.972;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9676;ERATE=0.0003;THETA=0.0012;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234492956 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0133;AVGPOST=0.9999;RSQ=0.9969;ERATE=0.0003;THETA=0.0014;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234493015 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2687;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0003;THETA=0.0005;AC=587;AN=2184 GT:DS:GL:BD 0.26877290 0
1 234493086 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9994;RSQ=0.9476;ERATE=0.0003;THETA=0.0012;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234493087 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9476;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234493089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.738;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6107;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234493228 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0086;AVGPOST=0.9984;RSQ=0.9330;ERATE=0.0003;THETA=0.0005;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234493315 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234493487 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.771;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8222;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234493494 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.818;LDAF=0.0031;AVGPOST=0.9983;RSQ=0.8065;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234493500 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.739;LDAF=0.0012;AVGPOST=0.9992;RSQ=0.7348;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234493516 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0060;AVGPOST=0.9994;RSQ=0.9598;ERATE=0.0003;THETA=0.0006;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234493610 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9805;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234493665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234493686 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2681;AVGPOST=0.9984;RSQ=0.9964;ERATE=0.0004;THETA=0.0008;AC=586;AN=2184 GT:DS:GL:BD 0.26831502 0
1 234493754 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.936;LDAF=0.0373;AVGPOST=0.9941;RSQ=0.9370;ERATE=0.0005;THETA=0.0004;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234493804 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0112;AVGPOST=0.9990;RSQ=0.9686;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234493845 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.974;LDAF=0.0495;AVGPOST=0.9969;RSQ=0.9743;ERATE=0.0003;THETA=0.0005;AC=107;AN=2184 GT:DS:GL:BD 0.04899267 0
1 234493950 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234493990 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0115;AVGPOST=0.9998;RSQ=0.9911;ERATE=0.0003;THETA=0.0006;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234494042 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3718;AVGPOST=0.9982;RSQ=0.9966;ERATE=0.0004;THETA=0.0005;AC=812;AN=2184 GT:DS:GL:BD 0.37179488 0
1 234494071 rs113104865 GCTT G 1563 PASS INDEL;BAVGPOST=0.998;BRSQ=0.935;LDAF=0.0118;AVGPOST=0.9991;RSQ=0.9668;ERATE=0.0004;THETA=0.0007;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234494100 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9356;ERATE=0.0003;THETA=0.0026;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234494102 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.896;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5888;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234494125 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8272;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234494249 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234494262 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0399;AVGPOST=0.9984;RSQ=0.9847;ERATE=0.0003;THETA=0.0008;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 234494299 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0107;AVGPOST=0.9995;RSQ=0.9774;ERATE=0.0004;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234494414 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0108;AVGPOST=0.9994;RSQ=0.9760;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234494574 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0063;AVGPOST=0.9994;RSQ=0.9610;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234494575 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0111;AVGPOST=0.9997;RSQ=0.9889;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234494579 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6694;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234494611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.808;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234494772 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.776;LDAF=0.0020;AVGPOST=0.9978;RSQ=0.6439;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234494885 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0105;AVGPOST=0.9995;RSQ=0.9820;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234494901 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234495008 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9991;RSQ=0.9686;ERATE=0.0004;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234495017 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0016;AVGPOST=0.9997;RSQ=0.8639;ERATE=0.0003;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234495034 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0105;AVGPOST=0.9999;RSQ=0.9942;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234495050 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9434;ERATE=0.0003;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234495122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9923;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234495150 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7828;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234495155 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0107;AVGPOST=0.9996;RSQ=0.9829;ERATE=0.0004;THETA=0.0014;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234495264 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9886;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234495343 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0086;AVGPOST=0.9994;RSQ=0.9786;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234495396 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234495511 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3169;AVGPOST=0.9961;RSQ=0.9924;ERATE=0.0008;THETA=0.0005;AC=693;AN=2184 GT:DS:GL:BD 0.31730768 0
1 234495560 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8600;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234495595 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.959;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234495834 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.699;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.6678;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234495896 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0023;AVGPOST=0.9991;RSQ=0.8168;ERATE=0.0005;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234495965 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.676;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7029;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234495974 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.766;LDAF=0.0023;AVGPOST=0.9994;RSQ=0.8714;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234495983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8963;ERATE=0.0004;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234495988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0096;AVGPOST=0.9977;RSQ=0.9170;ERATE=0.0004;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234496111 . C CA 1030 PASS INDEL;BAVGPOST=0.990;BRSQ=0.807;LDAF=0.0271;AVGPOST=0.9827;RSQ=0.7363;ERATE=0.0028;THETA=0.0005;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234496182 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234496190 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7163;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234496259 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0125;AVGPOST=0.9994;RSQ=0.9799;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234496417 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0204;AVGPOST=0.9992;RSQ=0.9839;ERATE=0.0004;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234496479 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234496480 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7082;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234496590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.955;LDAF=0.0135;AVGPOST=0.9971;RSQ=0.9107;ERATE=0.0003;THETA=0.0005;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234496678 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7513;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234496721 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7735;ERATE=0.0004;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234496832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7595;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234496880 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0641;AVGPOST=0.9996;RSQ=0.9972;ERATE=0.0003;THETA=0.0005;AC=140;AN=2184 GT:DS:GL:BD 0.06410257 0
1 234496886 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.955;LDAF=0.0022;AVGPOST=0.9993;RSQ=0.8758;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234496894 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0035;AVGPOST=0.9987;RSQ=0.8746;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234496962 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.7931;ERATE=0.0003;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234496965 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.897;LDAF=0.0019;AVGPOST=0.9997;RSQ=0.9315;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234497015 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.677;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6432;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234497108 . TC T 8 PASS INDEL;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6689;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234497131 rs67702354 C CCCAG 37256 PASS INDEL;BAVGPOST=0.981;BRSQ=0.959;LDAF=0.3008;AVGPOST=0.9812;RSQ=0.9651;ERATE=0.0036;THETA=0.0010;AC=666;AN=2184 GT:DS:GL:BD 0.30494505 0
1 234497156 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6963;ERATE=0.0003;THETA=0.0021;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234497176 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.711;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6963;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234497247 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0110;AVGPOST=1.0000;RSQ=0.9981;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234497270 . ACT A 4692 PASS INDEL;BAVGPOST=0.995;BRSQ=0.929;LDAF=0.0221;AVGPOST=0.9932;RSQ=0.8883;ERATE=0.0004;THETA=0.0006;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234497285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0251;AVGPOST=0.9996;RSQ=0.9939;ERATE=0.0003;THETA=0.0016;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234497308 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0114;AVGPOST=0.9991;RSQ=0.9750;ERATE=0.0003;THETA=0.0013;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234497329 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9944;ERATE=0.0003;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234497413 rs112342296 CAGAAA C 8034 PASS INDEL;BAVGPOST=0.995;BRSQ=0.961;LDAF=0.0526;AVGPOST=0.9953;RSQ=0.9644;ERATE=0.0006;THETA=0.0008;AC=114;AN=2184 GT:DS:GL:BD 0.05219780 0
1 234497417 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0032;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234497459 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6471;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234497470 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8767;ERATE=0.0005;THETA=0.0011;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234497526 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0061;AVGPOST=0.9997;RSQ=0.9783;ERATE=0.0004;THETA=0.0012;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234497539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0110;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234497569 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6140;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234497617 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.858;LDAF=0.0168;AVGPOST=0.9933;RSQ=0.8521;ERATE=0.0011;THETA=0.0015;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234497629 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.631;LDAF=0.0024;AVGPOST=0.9980;RSQ=0.6360;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234497632 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5809;ERATE=0.0004;THETA=0.0057;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234497667 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.941;LDAF=0.0516;AVGPOST=0.9888;RSQ=0.9195;ERATE=0.0004;THETA=0.0003;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234497808 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0008;AVGPOST=0.9991;RSQ=0.5664;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234497910 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0313;AVGPOST=0.9977;RSQ=0.9682;ERATE=0.0003;THETA=0.0011;AC=67;AN=2184 GT:DS:GL:BD 0.03067766 0
1 234497945 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7701;ERATE=0.0003;THETA=0.0008;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234497982 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6707;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234498076 rs71170477 AAACTC A 22285 PASS INDEL;BAVGPOST=0.990;BRSQ=0.980;LDAF=0.2495;AVGPOST=0.9895;RSQ=0.9767;ERATE=0.0005;THETA=0.0030;AC=547;AN=2184 GT:DS:GL:BD 0.25045788 0
1 234498296 . T TTAA 55 PASS INDEL;BAVGPOST=1.000;BRSQ=0.674;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5174;ERATE=0.0005;THETA=0.0040;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234498385 . G GA 11 PASS INDEL;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0009;AVGPOST=0.9989;RSQ=0.4758;ERATE=0.0004;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234498405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2548;AVGPOST=0.9888;RSQ=0.9760;ERATE=0.0006;THETA=0.0056;AC=557;AN=2184 GT:DS:GL:BD 0.25503662 0
1 234498443 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.7408;ERATE=0.0003;THETA=0.0063;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234498594 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.850;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.8015;ERATE=0.0006;THETA=0.0014;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234498829 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.929;LDAF=0.0516;AVGPOST=0.9900;RSQ=0.9347;ERATE=0.0005;THETA=0.0071;AC=108;AN=2184 GT:DS:GL:BD 0.04945055 0
1 234498854 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.864;LDAF=0.0079;AVGPOST=0.9981;RSQ=0.8984;ERATE=0.0003;THETA=0.0041;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234498885 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.828;LDAF=0.0025;AVGPOST=0.9987;RSQ=0.8018;ERATE=0.0003;THETA=0.0058;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234498900 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0010;AVGPOST=0.9993;RSQ=0.6636;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234498914 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.872;LDAF=0.0066;AVGPOST=0.9965;RSQ=0.7805;ERATE=0.0029;THETA=0.0010;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234499080 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.502;LDAF=0.0031;AVGPOST=0.9968;RSQ=0.5729;ERATE=0.0004;THETA=0.0093;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234499104 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.896;LDAF=0.1693;AVGPOST=0.9520;RSQ=0.8805;ERATE=0.0051;THETA=0.0091;AC=350;AN=2184 GT:DS:GL:BD 0.16025642 0
1 234499130 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6434;ERATE=0.0003;THETA=0.0094;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234499215 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0016;AVGPOST=0.9990;RSQ=0.7421;ERATE=0.0003;THETA=0.0017;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234499338 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7111;ERATE=0.0005;THETA=0.0053;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234499381 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.964;BRSQ=0.938;LDAF=0.3437;AVGPOST=0.9636;RSQ=0.9433;ERATE=0.0010;THETA=0.0035;AC=746;AN=2184 GT:DS:GL:BD 0.34157509 0
1 234499572 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.951;LDAF=0.0057;AVGPOST=0.9994;RSQ=0.9462;ERATE=0.0003;THETA=0.0140;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234499587 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.571;LDAF=0.9953;AVGPOST=0.9949;RSQ=0.5836;ERATE=0.0010;THETA=0.0013;AC=2176;AN=2184 GT:DS:GL:BD 0.99633700 1
1 234499656 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.752;LDAF=0.0028;AVGPOST=0.9962;RSQ=0.3970;ERATE=0.0009;THETA=0.0124;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234499709 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.850;LDAF=0.0100;AVGPOST=0.9952;RSQ=0.8019;ERATE=0.0005;THETA=0.0125;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234499729 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.841;LDAF=0.0009;AVGPOST=0.9988;RSQ=0.3779;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234499941 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.863;LDAF=0.0066;AVGPOST=0.9981;RSQ=0.8795;ERATE=0.0005;THETA=0.0273;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234500075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.949;LDAF=0.0288;AVGPOST=0.9978;RSQ=0.9678;ERATE=0.0004;THETA=0.0139;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 234500095 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.842;LDAF=0.0039;AVGPOST=0.9990;RSQ=0.8912;ERATE=0.0006;THETA=0.0016;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234500122 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.959;LDAF=0.0517;AVGPOST=0.9950;RSQ=0.9573;ERATE=0.0005;THETA=0.0046;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234500139 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6174;ERATE=0.0003;THETA=0.0092;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234500200 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6168;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234500263 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.863;LDAF=0.0061;AVGPOST=0.9978;RSQ=0.8597;ERATE=0.0003;THETA=0.0032;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234500433 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0079;AVGPOST=0.9995;RSQ=0.9740;ERATE=0.0003;THETA=0.0032;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234500513 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.851;LDAF=0.0063;AVGPOST=0.9991;RSQ=0.9391;ERATE=0.0006;THETA=0.0032;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234500530 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8865;ERATE=0.0003;THETA=0.0009;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234500531 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234500674 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7369;ERATE=0.0003;THETA=0.0042;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234500682 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0163;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234500757 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.832;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234500781 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0026;AVGPOST=0.9994;RSQ=0.8995;ERATE=0.0003;THETA=0.0046;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234500820 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.793;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6736;ERATE=0.0003;THETA=0.0077;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234500868 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0111;AVGPOST=0.9975;RSQ=0.9042;ERATE=0.0004;THETA=0.0038;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234500885 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.797;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0003;THETA=0.0048;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234500912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8346;ERATE=0.0004;THETA=0.0040;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234500917 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.577;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5878;ERATE=0.0004;THETA=0.0140;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234501283 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0143;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234501291 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.827;LDAF=0.0016;AVGPOST=0.9986;RSQ=0.6809;ERATE=0.0003;THETA=0.0025;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234501343 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0037;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234501487 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.895;LDAF=0.0059;AVGPOST=0.9983;RSQ=0.8960;ERATE=0.0003;THETA=0.0093;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234501491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0041;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234501706 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.841;LDAF=0.0031;AVGPOST=0.9992;RSQ=0.8880;ERATE=0.0004;THETA=0.0145;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234501722 rs113520246 G GTGTC 103706 PASS INDEL;BAVGPOST=0.979;BRSQ=0.968;LDAF=0.5683;AVGPOST=0.9701;RSQ=0.9561;ERATE=0.0079;THETA=0.0024;AC=1256;AN=2184 GT:DS:GL:BD 0.57509160 1
1 234501800 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.882;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8967;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234501851 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6180;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234501903 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0019;AVGPOST=0.9990;RSQ=0.8098;ERATE=0.0004;THETA=0.0029;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234501993 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.989;LDAF=0.5804;AVGPOST=0.9916;RSQ=0.9873;ERATE=0.0006;THETA=0.0028;AC=1268;AN=2184 GT:DS:GL:BD 0.58058608 1
1 234502053 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.919;LDAF=0.0254;AVGPOST=0.9935;RSQ=0.9020;ERATE=0.0003;THETA=0.0019;AC=50;AN=2184 GT:DS:GL:BD 0.02289377 0
1 234502061 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.682;LDAF=0.0018;AVGPOST=0.9983;RSQ=0.6318;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234502153 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.983;LDAF=0.5758;AVGPOST=0.9886;RSQ=0.9822;ERATE=0.0011;THETA=0.0017;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 234502198 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.880;LDAF=0.0078;AVGPOST=0.9973;RSQ=0.8471;ERATE=0.0004;THETA=0.0010;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234502281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.628;LDAF=0.0090;AVGPOST=0.9910;RSQ=0.5822;ERATE=0.0006;THETA=0.0012;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234502448 . G GA 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234502521 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.819;LDAF=0.0467;AVGPOST=0.9750;RSQ=0.7879;ERATE=0.0051;THETA=0.0057;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234502522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.786;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0026;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234502523 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.809;LDAF=0.0027;AVGPOST=0.9991;RSQ=0.8534;ERATE=0.0004;THETA=0.0061;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234502525 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.968;LDAF=0.0404;AVGPOST=0.9932;RSQ=0.9449;ERATE=0.0003;THETA=0.0045;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 234502533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.752;LDAF=0.0215;AVGPOST=0.9847;RSQ=0.7340;ERATE=0.0020;THETA=0.0014;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234502547 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.923;LDAF=0.0536;AVGPOST=0.9831;RSQ=0.8776;ERATE=0.0006;THETA=0.0024;AC=115;AN=2184 GT:DS:GL:BD 0.05265568 0
1 234502566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.799;LDAF=0.0058;AVGPOST=0.9958;RSQ=0.7086;ERATE=0.0006;THETA=0.0016;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234502572 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.962;BRSQ=0.579;LDAF=0.0590;AVGPOST=0.9322;RSQ=0.5339;ERATE=0.0073;THETA=0.0045;AC=78;AN=2184 GT:DS:GL:BD 0.03571429 0
1 234502578 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.742;LDAF=0.0100;AVGPOST=0.9932;RSQ=0.7437;ERATE=0.0008;THETA=0.0073;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234502591 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.939;BRSQ=0.724;LDAF=0.0958;AVGPOST=0.9579;RSQ=0.8367;ERATE=0.0004;THETA=0.0006;AC=183;AN=2184 GT:DS:GL:BD 0.08379121 0
1 234502592 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.938;BRSQ=0.725;LDAF=0.0942;AVGPOST=0.9579;RSQ=0.8313;ERATE=0.0007;THETA=0.0074;AC=178;AN=2184 GT:DS:GL:BD 0.08150183 0
1 234502607 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.464;LDAF=0.0025;AVGPOST=0.9967;RSQ=0.3907;ERATE=0.0008;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234502609 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.884;BRSQ=0.729;LDAF=0.2317;AVGPOST=0.8610;RSQ=0.7205;ERATE=0.0201;THETA=0.0006;AC=433;AN=2184 GT:DS:GL:BD 0.19826007 0
1 234502611 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.378;LDAF=0.0054;AVGPOST=0.9934;RSQ=0.4752;ERATE=0.0013;THETA=0.0060;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234502613 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.489;LDAF=0.0122;AVGPOST=0.9840;RSQ=0.4810;ERATE=0.0012;THETA=0.0030;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234502638 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.992;BRSQ=0.653;LDAF=0.0139;AVGPOST=0.9892;RSQ=0.6796;ERATE=0.0028;THETA=0.0063;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234502652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.940;LDAF=0.0166;AVGPOST=0.9951;RSQ=0.8994;ERATE=0.0009;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234502668 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0019;AVGPOST=0.9984;RSQ=0.6328;ERATE=0.0004;THETA=0.0019;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234502696 . G GA 65 PASS INDEL;BAVGPOST=0.998;BRSQ=0.643;LDAF=0.0060;AVGPOST=0.9932;RSQ=0.5062;ERATE=0.0021;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234502749 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.675;LDAF=0.0104;AVGPOST=0.9934;RSQ=0.7254;ERATE=0.0013;THETA=0.0025;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234502760 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0310;AVGPOST=0.9977;RSQ=0.9766;ERATE=0.0003;THETA=0.0012;AC=69;AN=2184 GT:DS:GL:BD 0.03159341 0
1 234502780 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.516;LDAF=0.0102;AVGPOST=0.9910;RSQ=0.6363;ERATE=0.0006;THETA=0.0084;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234502784 . ACT A 26 PASS INDEL;BAVGPOST=0.999;BRSQ=0.597;LDAF=0.0027;AVGPOST=0.9973;RSQ=0.5961;ERATE=0.0006;THETA=0.0012;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234502803 rs67501557 AAGAAGG A 35473 PASS INDEL;BAVGPOST=0.963;BRSQ=0.931;LDAF=0.3713;AVGPOST=0.9370;RSQ=0.9008;ERATE=0.0078;THETA=0.0064;AC=800;AN=2184 GT:DS:GL:BD 0.36630037 0
1 234502995 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9885;ERATE=0.0003;THETA=0.0015;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234503055 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.965;LDAF=0.0416;AVGPOST=0.9951;RSQ=0.9609;ERATE=0.0004;THETA=0.0011;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 234503213 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.869;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0060;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234503292 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.888;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.5971;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234503297 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234503369 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0821;AVGPOST=0.9991;RSQ=0.9949;ERATE=0.0003;THETA=0.0008;AC=179;AN=2184 GT:DS:GL:BD 0.08195971 0
1 234503417 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234503496 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6469;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234503541 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0041;AVGPOST=0.9993;RSQ=0.9355;ERATE=0.0003;THETA=0.0013;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234503615 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9365;ERATE=0.0004;THETA=0.0033;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234503848 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.966;LDAF=0.4281;AVGPOST=0.9761;RSQ=0.9636;ERATE=0.0005;THETA=0.0007;AC=941;AN=2184 GT:DS:GL:BD 0.43086082 0
1 234504020 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234504050 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7475;ERATE=0.0005;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234504053 . AGAG A 89 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6929;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234504079 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0136;AVGPOST=0.9985;RSQ=0.9558;ERATE=0.0003;THETA=0.0010;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234504083 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234504096 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0130;AVGPOST=0.9987;RSQ=0.9575;ERATE=0.0004;THETA=0.0050;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234504157 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0012;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234504165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234504199 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0031;AVGPOST=0.9993;RSQ=0.9218;ERATE=0.0003;THETA=0.0008;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234504257 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0032;AVGPOST=0.9999;RSQ=0.9801;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234504322 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9565;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234504329 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0237;AVGPOST=0.9997;RSQ=0.9945;ERATE=0.0003;THETA=0.0007;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234504427 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8824;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234504442 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234504497 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0015;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234504517 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8988;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234504722 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0203;AVGPOST=0.9996;RSQ=0.9922;ERATE=0.0003;THETA=0.0012;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234504779 rs58570062 C CT 10550 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0720;AVGPOST=0.9984;RSQ=0.9894;ERATE=0.0005;THETA=0.0005;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234504781 . T TA 763 PASS INDEL;BAVGPOST=0.995;BRSQ=0.963;LDAF=0.0767;AVGPOST=0.9890;RSQ=0.9356;ERATE=0.0007;THETA=0.0005;AC=163;AN=2184 GT:DS:GL:BD 0.07463370 0
1 234504833 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9641;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234504877 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234505003 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0124;AVGPOST=0.9999;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234505009 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0026;AVGPOST=0.9984;RSQ=0.7504;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234505024 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0717;AVGPOST=0.9990;RSQ=0.9938;ERATE=0.0004;THETA=0.0008;AC=156;AN=2184 GT:DS:GL:BD 0.07142857 0
1 234505039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0049;AVGPOST=0.9993;RSQ=0.9434;ERATE=0.0003;THETA=0.0006;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234505161 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234505233 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9402;ERATE=0.0003;THETA=0.0014;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234505274 . GTTTA G 65 PASS INDEL;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8582;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234505463 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6557;ERATE=0.0003;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234505541 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0044;AVGPOST=0.9982;RSQ=0.8409;ERATE=0.0003;THETA=0.0010;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234505664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9025;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234505774 . ACT A 464 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0019;AVGPOST=0.9981;RSQ=0.5630;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234505941 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.0851;AVGPOST=0.9996;RSQ=0.9977;ERATE=0.0005;THETA=0.0008;AC=186;AN=2184 GT:DS:GL:BD 0.08516484 0
1 234505980 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0023;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234506036 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0012;AVGPOST=0.9984;RSQ=0.5721;ERATE=0.0004;THETA=0.0020;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234506037 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0696;AVGPOST=0.9984;RSQ=0.9910;ERATE=0.0004;THETA=0.0003;AC=153;AN=2184 GT:DS:GL:BD 0.07005495 0
1 234506084 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.985;LDAF=0.0671;AVGPOST=0.9980;RSQ=0.9872;ERATE=0.0005;THETA=0.0012;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234506142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0127;AVGPOST=0.9987;RSQ=0.9648;ERATE=0.0003;THETA=0.0004;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234506157 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.1477;AVGPOST=0.9896;RSQ=0.9721;ERATE=0.0006;THETA=0.0009;AC=321;AN=2184 GT:DS:GL:BD 0.14697802 0
1 234506334 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6079;ERATE=0.0003;THETA=0.0015;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234506389 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.715;LDAF=0.0070;AVGPOST=0.9921;RSQ=0.5672;ERATE=0.0015;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234506457 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.987;LDAF=0.0673;AVGPOST=0.9977;RSQ=0.9863;ERATE=0.0005;THETA=0.0006;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234506616 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.985;LDAF=0.3107;AVGPOST=0.9921;RSQ=0.9871;ERATE=0.0005;THETA=0.0005;AC=677;AN=2184 GT:DS:GL:BD 0.30998167 0
1 234506633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0010;AVGPOST=0.9987;RSQ=0.4694;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234506875 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234506914 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234506950 . CTCAT C 145 PASS INDEL;BAVGPOST=1.000;BRSQ=0.825;LDAF=0.0019;AVGPOST=0.9986;RSQ=0.6475;ERATE=0.0005;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234507000 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.990;LDAF=0.0707;AVGPOST=0.9986;RSQ=0.9915;ERATE=0.0005;THETA=0.0003;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234507093 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0027;AVGPOST=0.9988;RSQ=0.8171;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234507094 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6850;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234507144 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.961;LDAF=0.0161;AVGPOST=0.9963;RSQ=0.9075;ERATE=0.0003;THETA=0.0006;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234507161 . C CA 46 PASS INDEL;BAVGPOST=0.992;BRSQ=0.563;LDAF=0.0150;AVGPOST=0.9823;RSQ=0.5167;ERATE=0.0051;THETA=0.0008;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234507194 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.950;LDAF=0.0206;AVGPOST=0.9968;RSQ=0.9520;ERATE=0.0003;THETA=0.0006;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234507256 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9260;ERATE=0.0003;THETA=0.0016;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234507370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8893;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234507382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0666;AVGPOST=0.9994;RSQ=0.9968;ERATE=0.0003;THETA=0.0012;AC=146;AN=2184 GT:DS:GL:BD 0.06684982 0
1 234507605 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234507693 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8113;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234507806 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9692;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234507845 . C CT 538 PASS INDEL;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8017;ERATE=0.0005;THETA=0.0023;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234507850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0004;THETA=0.0013;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234507910 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234507912 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7605;ERATE=0.0004;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234507925 . TATTA T 210 PASS INDEL;BAVGPOST=0.999;BRSQ=0.777;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6463;ERATE=0.0008;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234507960 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.937;LDAF=0.0129;AVGPOST=0.9992;RSQ=0.9777;ERATE=0.0003;THETA=0.0008;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234507977 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.5855;AVGPOST=0.9934;RSQ=0.9904;ERATE=0.0006;THETA=0.0002;AC=1280;AN=2184 GT:DS:GL:BD 0.58608061 1
1 234507994 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.898;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234508107 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.846;LDAF=0.0139;AVGPOST=0.9939;RSQ=0.8366;ERATE=0.0014;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234508109 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.790;LDAF=0.0017;AVGPOST=0.9985;RSQ=0.6447;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234508161 . TCTTTC T 208 PASS INDEL;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8930;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234508209 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.899;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234508423 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0133;AVGPOST=0.9989;RSQ=0.9706;ERATE=0.0004;THETA=0.0004;AC=28;AN=2184 GT:DS:GL:BD 0.01282051 0
1 234508466 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0023;AVGPOST=0.9998;RSQ=0.9626;ERATE=0.0003;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234508535 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.982;LDAF=0.0681;AVGPOST=0.9995;RSQ=0.9964;ERATE=0.0003;THETA=0.0005;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234508576 . TTTC T 8385 PASS INDEL;BAVGPOST=0.994;BRSQ=0.960;LDAF=0.0689;AVGPOST=0.9980;RSQ=0.9872;ERATE=0.0004;THETA=0.0009;AC=149;AN=2184 GT:DS:GL:BD 0.06822345 0
1 234508622 . TAAC T 2301 PASS INDEL;BAVGPOST=0.994;BRSQ=0.849;LDAF=0.0191;AVGPOST=0.9937;RSQ=0.8583;ERATE=0.0004;THETA=0.0003;AC=39;AN=2184 GT:DS:GL:BD 0.01785714 0
1 234508662 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.774;LDAF=0.0020;AVGPOST=0.9979;RSQ=0.5762;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234508666 . T TA 43 PASS INDEL;BAVGPOST=0.995;BRSQ=0.543;LDAF=0.0031;AVGPOST=0.9966;RSQ=0.5592;ERATE=0.0006;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234508704 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.961;LDAF=0.0402;AVGPOST=0.9985;RSQ=0.9833;ERATE=0.0004;THETA=0.0003;AC=87;AN=2184 GT:DS:GL:BD 0.03983517 0
1 234508722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5922;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234508749 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0109;AVGPOST=0.9990;RSQ=0.9680;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234508777 . CTTT C 136 PASS INDEL;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0035;AVGPOST=0.9969;RSQ=0.6579;ERATE=0.0006;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234508787 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.642;LDAF=0.0026;AVGPOST=0.9972;RSQ=0.5599;ERATE=0.0013;THETA=0.0007;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234508798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.747;LDAF=0.0075;AVGPOST=0.9984;RSQ=0.9003;ERATE=0.0005;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234508836 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.860;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.8929;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234508849 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.790;LDAF=0.0084;AVGPOST=0.9970;RSQ=0.8603;ERATE=0.0003;THETA=0.0008;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234508852 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.841;LDAF=0.0140;AVGPOST=0.9960;RSQ=0.8784;ERATE=0.0004;THETA=0.0007;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234508901 . CT C 54 PASS INDEL;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5378;ERATE=0.0006;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234508935 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5677;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234508956 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0908;AVGPOST=0.9984;RSQ=0.9925;ERATE=0.0008;THETA=0.0004;AC=199;AN=2184 GT:DS:GL:BD 0.09111722 0
1 234509095 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.852;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.6819;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234509121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7587;ERATE=0.0003;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234509136 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.894;LDAF=0.0047;AVGPOST=0.9978;RSQ=0.8228;ERATE=0.0005;THETA=0.0009;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234509184 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0027;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234509251 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.879;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8804;ERATE=0.0004;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234509254 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234509259 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.994;LDAF=0.5995;AVGPOST=0.9939;RSQ=0.9919;ERATE=0.0020;THETA=0.0003;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 234509297 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234509403 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.930;LDAF=0.0074;AVGPOST=0.9982;RSQ=0.9071;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234509424 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234509568 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0011;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234509586 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0064;AVGPOST=0.9999;RSQ=0.9931;ERATE=0.0003;THETA=0.0007;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234509863 . T TG 18016 PASS INDEL;BAVGPOST=0.934;BRSQ=0.875;LDAF=0.4729;AVGPOST=0.8846;RSQ=0.8238;ERATE=0.0411;THETA=0.0002;AC=1037;AN=2184 GT:DS:GL:BD 0.47481686 0
1 234509935 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234509972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0891;AVGPOST=0.9999;RSQ=0.9993;ERATE=0.0003;THETA=0.0005;AC=195;AN=2184 GT:DS:GL:BD 0.08928572 0
1 234510093 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234510142 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234510223 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234510262 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5196;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0008;AC=1134;AN=2184 GT:DS:GL:BD 0.51923078 1
1 234510303 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8540;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234510614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0089;AVGPOST=0.9989;RSQ=0.9457;ERATE=0.0003;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234510624 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0671;AVGPOST=0.9992;RSQ=0.9954;ERATE=0.0003;THETA=0.0005;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234510727 . C CCAGT 406 PASS INDEL;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0033;AVGPOST=0.9980;RSQ=0.7491;ERATE=0.0007;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234511010 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6674;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234511058 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9654;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234511131 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5709;ERATE=0.0004;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234511213 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5656;AVGPOST=0.9990;RSQ=0.9986;ERATE=0.0004;THETA=0.0007;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 234511216 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0110;AVGPOST=0.9991;RSQ=0.9723;ERATE=0.0003;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234511225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234511357 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.747;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.7338;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234511381 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.966;LDAF=0.0047;AVGPOST=0.9994;RSQ=0.9406;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234511460 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.567;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6603;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234511503 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5999;AVGPOST=0.9971;RSQ=0.9956;ERATE=0.0006;THETA=0.0005;AC=1311;AN=2184 GT:DS:GL:BD 0.60027474 1
1 234511512 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0113;AVGPOST=0.9982;RSQ=0.9405;ERATE=0.0004;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234511541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4948;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0006;THETA=0.0006;AC=1079;AN=2184 GT:DS:GL:BD 0.49404761 0
1 234511590 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6853;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234511621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0118;AVGPOST=0.9992;RSQ=0.9758;ERATE=0.0003;THETA=0.0018;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234511849 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.927;LDAF=0.0181;AVGPOST=0.9972;RSQ=0.9365;ERATE=0.0003;THETA=0.0006;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234511889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6208;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234511907 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0140;AVGPOST=0.9993;RSQ=0.9821;ERATE=0.0003;THETA=0.0009;AC=31;AN=2184 GT:DS:GL:BD 0.01419414 0
1 234511948 . CCTCT C 39 PASS INDEL;BAVGPOST=1.000;BRSQ=0.828;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5490;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234511969 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7452;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234512008 . CT C 8801 PASS INDEL;BAVGPOST=0.936;BRSQ=0.881;LDAF=0.4401;AVGPOST=0.8983;RSQ=0.8511;ERATE=0.0211;THETA=0.0005;AC=996;AN=2184 GT:DS:GL:BD 0.45604396 0
1 234512010 rs11285466 TC T 38040 PASS INDEL;BAVGPOST=0.983;BRSQ=0.972;LDAF=0.4976;AVGPOST=0.9917;RSQ=0.9882;ERATE=0.0006;THETA=0.0001;AC=1090;AN=2184 GT:DS:GL:BD 0.49908423 0
1 234512060 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234512074 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8939;ERATE=0.0003;THETA=0.0048;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234512128 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=0.9998;RSQ=0.9394;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234512160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9093;ERATE=0.0003;THETA=0.0010;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234512169 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.4829;AVGPOST=0.9980;RSQ=0.9968;ERATE=0.0004;THETA=0.0006;AC=1054;AN=2184 GT:DS:GL:BD 0.48260072 0
1 234512192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8625;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234512299 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.839;LDAF=0.0044;AVGPOST=0.9992;RSQ=0.9348;ERATE=0.0003;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234512471 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5636;AVGPOST=0.9980;RSQ=0.9969;ERATE=0.0004;THETA=0.0002;AC=1231;AN=2184 GT:DS:GL:BD 0.56364471 1
1 234512519 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5636;AVGPOST=0.9982;RSQ=0.9974;ERATE=0.0004;THETA=0.0018;AC=1231;AN=2184 GT:DS:GL:BD 0.56364471 1
1 234512554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.856;LDAF=0.0114;AVGPOST=0.9973;RSQ=0.9011;ERATE=0.0004;THETA=0.0023;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234512583 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4845;AVGPOST=0.9963;RSQ=0.9941;ERATE=0.0008;THETA=0.0005;AC=1057;AN=2184 GT:DS:GL:BD 0.48397437 0
1 234512588 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.718;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.7961;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234512592 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6829;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234512593 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5525;AVGPOST=0.9971;RSQ=0.9960;ERATE=0.0004;THETA=0.0004;AC=1207;AN=2184 GT:DS:GL:BD 0.55265570 1
1 234512685 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5619;AVGPOST=0.9979;RSQ=0.9972;ERATE=0.0005;THETA=0.0006;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 234512701 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234512748 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.839;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5800;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234512767 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5609;AVGPOST=0.9959;RSQ=0.9943;ERATE=0.0007;THETA=0.0003;AC=1225;AN=2184 GT:DS:GL:BD 0.56089741 1
1 234512847 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.909;BRSQ=0.852;LDAF=0.3726;AVGPOST=0.8813;RSQ=0.8401;ERATE=0.0819;THETA=0.0003;AC=827;AN=2184 GT:DS:GL:BD 0.37866300 0
1 234512876 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.922;BRSQ=0.574;LDAF=0.1152;AVGPOST=0.9128;RSQ=0.6516;ERATE=0.0050;THETA=0.0003;AC=197;AN=2184 GT:DS:GL:BD 0.09020147 0
1 234512876 . T TG 125 PASS INDEL;BAVGPOST=0.960;BRSQ=0.341;LDAF=0.0429;AVGPOST=0.9455;RSQ=0.5059;ERATE=0.0045;THETA=0.0004;AC=55;AN=2184 GT:DS:GL:BD 0.02518315 0
1 234512879 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.916;BRSQ=0.593;LDAF=0.1621;AVGPOST=0.8809;RSQ=0.6420;ERATE=0.0141;THETA=0.0009;AC=283;AN=2184 GT:DS:GL:BD 0.12957875 0
1 234512894 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.840;BRSQ=0.730;LDAF=0.3904;AVGPOST=0.8872;RSQ=0.8427;ERATE=0.0034;THETA=0.0006;AC=882;AN=2184 GT:DS:GL:BD 0.40384614 0
1 234513021 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.735;LDAF=0.0016;AVGPOST=0.9978;RSQ=0.5108;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234513105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0019;AVGPOST=0.9983;RSQ=0.6462;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234513137 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5857;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234513155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.554;LDAF=0.0022;AVGPOST=0.9983;RSQ=0.7222;ERATE=0.0004;THETA=0.0027;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234513232 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0064;AVGPOST=0.9993;RSQ=0.9566;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234513252 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0003;AVGPOST=0.9996;RSQ=0.5574;ERATE=0.0003;THETA=0.0007;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234513318 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0795;AVGPOST=0.9990;RSQ=0.9942;ERATE=0.0004;THETA=0.0003;AC=174;AN=2184 GT:DS:GL:BD 0.07967033 0
1 234513389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9225;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234513413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.822;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234513512 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.5612;AVGPOST=0.9967;RSQ=0.9953;ERATE=0.0005;THETA=0.0023;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 234513545 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0035;AVGPOST=0.9993;RSQ=0.9074;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234513623 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6262;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234513680 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5516;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234513707 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5624;AVGPOST=0.9978;RSQ=0.9965;ERATE=0.0007;THETA=0.0007;AC=1227;AN=2184 GT:DS:GL:BD 0.56181318 1
1 234513717 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.865;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8896;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234513726 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.849;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8636;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234513738 . G GAATGAC 236 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.5990;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234513746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0590;AVGPOST=0.9977;RSQ=0.9863;ERATE=0.0003;THETA=0.0007;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 234513751 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234513813 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234513871 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5616;AVGPOST=0.9989;RSQ=0.9982;ERATE=0.0005;THETA=0.0014;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 234513926 . G GA 221 PASS INDEL;BAVGPOST=0.999;BRSQ=0.748;LDAF=0.0060;AVGPOST=0.9934;RSQ=0.5668;ERATE=0.0024;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234513957 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234513960 . AC A 506 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9993;RSQ=0.8972;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234514021 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0024;AVGPOST=0.9992;RSQ=0.8690;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234514025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.990;LDAF=0.4824;AVGPOST=0.9953;RSQ=0.9922;ERATE=0.0014;THETA=0.0004;AC=1054;AN=2184 GT:DS:GL:BD 0.48260072 0
1 234514042 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.7969;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234514045 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0066;AVGPOST=0.9992;RSQ=0.9486;ERATE=0.0003;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234514175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234514202 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8220;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234514230 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0130;AVGPOST=0.9975;RSQ=0.9244;ERATE=0.0006;THETA=0.0008;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234514233 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234514267 . C CT 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0061;AVGPOST=0.9947;RSQ=0.6767;ERATE=0.0012;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234514268 . A AT 132 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7323;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234514348 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0591;AVGPOST=0.9972;RSQ=0.9819;ERATE=0.0004;THETA=0.0003;AC=128;AN=2184 GT:DS:GL:BD 0.05860806 0
1 234514362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0016;AVGPOST=0.9980;RSQ=0.5206;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234514395 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8095;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234514485 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.981;LDAF=0.3277;AVGPOST=0.9912;RSQ=0.9841;ERATE=0.0016;THETA=0.0032;AC=711;AN=2184 GT:DS:GL:BD 0.32554945 0
1 234514522 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.799;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.7629;ERATE=0.0005;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234514584 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.480;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5224;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234514613 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.951;BRSQ=0.920;LDAF=0.4592;AVGPOST=0.9582;RSQ=0.9375;ERATE=0.0094;THETA=0.0005;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 234514672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4848;AVGPOST=0.9946;RSQ=0.9926;ERATE=0.0005;THETA=0.0003;AC=1057;AN=2184 GT:DS:GL:BD 0.48397437 0
1 234514725 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4847;AVGPOST=0.9983;RSQ=0.9973;ERATE=0.0005;THETA=0.0003;AC=1056;AN=2184 GT:DS:GL:BD 0.48351648 0
1 234514748 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.922;LDAF=0.0199;AVGPOST=0.9913;RSQ=0.8282;ERATE=0.0011;THETA=0.0005;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234514921 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0065;AVGPOST=0.9979;RSQ=0.8813;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234515028 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0031;AVGPOST=0.9995;RSQ=0.9460;ERATE=0.0003;THETA=0.0007;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234515114 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234515135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5618;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0020;AC=1226;AN=2184 GT:DS:GL:BD 0.56135529 1
1 234515165 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234515225 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9370;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234515265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.995;LDAF=0.3116;AVGPOST=0.9976;RSQ=0.9960;ERATE=0.0004;THETA=0.0039;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 234515322 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0027;AVGPOST=0.9994;RSQ=0.9105;ERATE=0.0017;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234515387 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9212;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234515405 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234515445 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0020;AVGPOST=0.9992;RSQ=0.8252;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234515478 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0013;AVGPOST=0.9989;RSQ=0.5998;ERATE=0.0005;THETA=0.0010;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234515561 . CACTT C 330 PASS INDEL;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234515577 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8333;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234515587 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0029;AVGPOST=0.9991;RSQ=0.8756;ERATE=0.0005;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234515608 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0582;AVGPOST=0.9989;RSQ=0.9924;ERATE=0.0003;THETA=0.0005;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234515633 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234515643 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0074;AVGPOST=0.9968;RSQ=0.8216;ERATE=0.0003;THETA=0.0006;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234515846 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0032;AVGPOST=0.9992;RSQ=0.8913;ERATE=0.0003;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234515879 . CT C 5 PASS INDEL;BAVGPOST=0.999;BRSQ=0.687;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5354;ERATE=0.0006;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234515891 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234515894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9429;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234515941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0020;AVGPOST=0.9993;RSQ=0.8471;ERATE=0.0006;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234515998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234516001 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0079;AVGPOST=0.9997;RSQ=0.9826;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234516056 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9655;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234516152 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.989;LDAF=0.0858;AVGPOST=0.9981;RSQ=0.9921;ERATE=0.0003;THETA=0.0002;AC=188;AN=2184 GT:DS:GL:BD 0.08608059 0
1 234516310 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7805;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234516350 . A AT 40 PASS INDEL;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234516391 . TACCAA T 10908 PASS INDEL;BAVGPOST=0.994;BRSQ=0.958;LDAF=0.0696;AVGPOST=0.9973;RSQ=0.9835;ERATE=0.0005;THETA=0.0003;AC=152;AN=2184 GT:DS:GL:BD 0.06959707 0
1 234516451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234516566 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.909;LDAF=0.0584;AVGPOST=0.9954;RSQ=0.9665;ERATE=0.0007;THETA=0.0011;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234516608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.762;LDAF=0.0033;AVGPOST=0.9978;RSQ=0.7035;ERATE=0.0015;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234516617 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.990;LDAF=0.3218;AVGPOST=0.9867;RSQ=0.9785;ERATE=0.0012;THETA=0.0005;AC=697;AN=2184 GT:DS:GL:BD 0.31913918 0
1 234516619 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.909;LDAF=0.0306;AVGPOST=0.9930;RSQ=0.9074;ERATE=0.0006;THETA=0.0005;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234516714 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.861;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.6524;ERATE=0.0005;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234516744 . AAAAAT A 128 PASS INDEL;BAVGPOST=0.998;BRSQ=0.858;LDAF=0.0044;AVGPOST=0.9955;RSQ=0.5763;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234516793 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.823;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6603;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234516969 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.780;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8199;ERATE=0.0004;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234517149 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0042;AVGPOST=0.9998;RSQ=0.9792;ERATE=0.0003;THETA=0.0026;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234517159 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0038;AVGPOST=0.9997;RSQ=0.9690;ERATE=0.0003;THETA=0.0005;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234517186 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0029;AVGPOST=0.9998;RSQ=0.9618;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234517193 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8341;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234517227 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.4865;AVGPOST=0.9981;RSQ=0.9970;ERATE=0.0003;THETA=0.0003;AC=1062;AN=2184 GT:DS:GL:BD 0.48626372 0
1 234517244 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0109;AVGPOST=0.9992;RSQ=0.9750;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234517248 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8802;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234517254 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5972;ERATE=0.0004;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234517402 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234517469 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234517474 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.3140;AVGPOST=0.9979;RSQ=0.9961;ERATE=0.0007;THETA=0.0004;AC=683;AN=2184 GT:DS:GL:BD 0.31272894 0
1 234517520 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5905;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234517583 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7921;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234517594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.5739;AVGPOST=0.9981;RSQ=0.9972;ERATE=0.0004;THETA=0.0005;AC=1254;AN=2184 GT:DS:GL:BD 0.57417583 1
1 234517697 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.893;LDAF=0.0123;AVGPOST=0.9981;RSQ=0.9409;ERATE=0.0004;THETA=0.0003;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234517756 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.726;LDAF=0.0015;AVGPOST=0.9989;RSQ=0.7755;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234517808 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.935;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234517872 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234517918 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5687;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234517954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0033;AVGPOST=0.9999;RSQ=0.9799;ERATE=0.0003;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234517967 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234517992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7802;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234517998 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0774;AVGPOST=0.9985;RSQ=0.9919;ERATE=0.0003;THETA=0.0008;AC=170;AN=2184 GT:DS:GL:BD 0.07783883 0
1 234518038 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.855;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234518124 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234518248 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.832;LDAF=0.0103;AVGPOST=0.9964;RSQ=0.8469;ERATE=0.0005;THETA=0.0007;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234518494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0037;AVGPOST=0.9991;RSQ=0.8879;ERATE=0.0004;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234518685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0087;AVGPOST=0.9974;RSQ=0.8725;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234518721 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0090;AVGPOST=0.9971;RSQ=0.8501;ERATE=0.0008;THETA=0.0002;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234518739 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.239;LDAF=0.0050;AVGPOST=0.9930;RSQ=0.4167;ERATE=0.0011;THETA=0.0005;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234518778 . AAG A 532 PASS INDEL;BAVGPOST=0.687;BRSQ=0.271;LDAF=0.2522;AVGPOST=0.7167;RSQ=0.3988;ERATE=0.0213;THETA=0.0002;AC=429;AN=2184 GT:DS:GL:BD 0.19642857 0
1 234518786 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.905;BRSQ=0.264;LDAF=0.1284;AVGPOST=0.8234;RSQ=0.3559;ERATE=0.0178;THETA=0.0004;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 234518802 . G GA 315 PASS INDEL;BAVGPOST=0.946;BRSQ=0.441;LDAF=0.1210;AVGPOST=0.8369;RSQ=0.4059;ERATE=0.0090;THETA=0.0004;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 234518822 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.952;BRSQ=0.670;LDAF=0.0919;AVGPOST=0.9513;RSQ=0.7806;ERATE=0.0043;THETA=0.0003;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 234519118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.969;BRSQ=0.388;LDAF=0.9556;AVGPOST=0.9427;RSQ=0.4687;ERATE=0.0063;THETA=0.0004;AC=2135;AN=2184 GT:DS:GL:BD 0.97756410 1
1 234519144 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0023;AVGPOST=0.9972;RSQ=0.4729;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234519256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.6641;ERATE=0.0006;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234519298 . ACAT A 229 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0037;AVGPOST=0.9989;RSQ=0.8727;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234519385 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.4880;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0004;AC=1065;AN=2184 GT:DS:GL:BD 0.48763737 0
1 234519452 rs66521558 C CT 33056 PASS INDEL;BAVGPOST=0.968;BRSQ=0.941;LDAF=0.5709;AVGPOST=0.9232;RSQ=0.8919;ERATE=0.0150;THETA=0.0005;AC=1264;AN=2184 GT:DS:GL:BD 0.57875460 1
1 234519796 . CTTTTG C 483 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0046;AVGPOST=0.9988;RSQ=0.8926;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234519924 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.698;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234519991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.733;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7815;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234520034 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.707;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5792;ERATE=0.0003;THETA=0.0016;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234520082 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234520088 . C CA 9 PASS INDEL;BAVGPOST=0.998;BRSQ=0.672;LDAF=0.0026;AVGPOST=0.9968;RSQ=0.4943;ERATE=0.0009;THETA=0.0009;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234520288 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0156;AVGPOST=0.9996;RSQ=0.9888;ERATE=0.0003;THETA=0.0047;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234520311 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234520340 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0012;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234520550 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0028;AVGPOST=0.9988;RSQ=0.8401;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234520588 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234520784 rs60111174 A ACTT 54706 PASS INDEL;BAVGPOST=0.976;BRSQ=0.953;LDAF=0.3120;AVGPOST=0.9928;RSQ=0.9880;ERATE=0.0004;THETA=0.0005;AC=684;AN=2184 GT:DS:GL:BD 0.31318682 0
1 234520787 . T TC 8824 PASS INDEL;BAVGPOST=0.957;BRSQ=0.903;LDAF=0.2766;AVGPOST=0.9482;RSQ=0.9073;ERATE=0.0072;THETA=0.0004;AC=610;AN=2184 GT:DS:GL:BD 0.27930403 0
1 234520896 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6765;ERATE=0.0004;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234520988 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234521016 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0065;AVGPOST=0.9996;RSQ=0.9703;ERATE=0.0003;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234521024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3172;AVGPOST=0.9970;RSQ=0.9948;ERATE=0.0007;THETA=0.0002;AC=692;AN=2184 GT:DS:GL:BD 0.31684983 0
1 234521034 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0018;AVGPOST=0.9990;RSQ=0.7729;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234521092 . G GT 3979 PASS INDEL;BAVGPOST=0.995;BRSQ=0.924;LDAF=0.0203;AVGPOST=0.9969;RSQ=0.9419;ERATE=0.0003;THETA=0.0005;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234521118 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.4871;AVGPOST=0.9982;RSQ=0.9976;ERATE=0.0003;THETA=0.0005;AC=1063;AN=2184 GT:DS:GL:BD 0.48672161 0
1 234521205 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0034;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234521488 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.880;LDAF=0.0023;AVGPOST=0.9981;RSQ=0.6407;ERATE=0.0007;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234521614 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.646;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234521621 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234521718 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5564;AVGPOST=0.9973;RSQ=0.9963;ERATE=0.0004;THETA=0.0003;AC=1215;AN=2184 GT:DS:GL:BD 0.55631870 1
1 234521757 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234521815 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8550;ERATE=0.0003;THETA=0.0010;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234522012 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.826;LDAF=0.0314;AVGPOST=0.9914;RSQ=0.8934;ERATE=0.0004;THETA=0.0004;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 234522049 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8843;ERATE=0.0004;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234522181 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234522330 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6896;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234522674 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.970;BRSQ=0.794;LDAF=0.9403;AVGPOST=0.9851;RSQ=0.9044;ERATE=0.0005;THETA=0.0005;AC=2061;AN=2184 GT:DS:GL:BD 0.94368130 1
1 234522686 . A AAC 26 PASS INDEL;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0020;AVGPOST=0.9969;RSQ=0.3702;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234522731 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7457;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234522847 . CAG C 124 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5436;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234523211 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9402;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234523214 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6468;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234523371 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0073;AVGPOST=0.9995;RSQ=0.9722;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234523403 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0017;AVGPOST=0.9992;RSQ=0.7736;ERATE=0.0006;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234523468 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.680;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.9222;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234523541 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6624;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234523546 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.904;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6404;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234523660 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234523776 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8605;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234523853 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.8054;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234523938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=1.0000;RSQ=0.9972;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234524045 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.4896;AVGPOST=0.9967;RSQ=0.9948;ERATE=0.0006;THETA=0.0003;AC=1069;AN=2184 GT:DS:GL:BD 0.48946887 0
1 234524046 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8457;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234524101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6976;ERATE=0.0003;THETA=0.0010;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234524153 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9420;ERATE=0.0006;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234524229 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0046;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0026;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234524381 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6688;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234524390 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6710;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234524496 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.901;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6846;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234524527 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0110;AVGPOST=0.9989;RSQ=0.9560;ERATE=0.0005;THETA=0.0004;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234524613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0105;AVGPOST=0.9998;RSQ=0.9925;ERATE=0.0003;THETA=0.0005;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234524642 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0078;AVGPOST=0.9999;RSQ=0.9916;ERATE=0.0003;THETA=0.0001;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234524678 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234524810 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7676;ERATE=0.0003;THETA=0.0018;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234524817 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7944;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234525114 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.970;LDAF=0.0628;AVGPOST=0.9975;RSQ=0.9867;ERATE=0.0003;THETA=0.0011;AC=137;AN=2184 GT:DS:GL:BD 0.06272894 0
1 234525279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.759;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234525333 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.985;LDAF=0.4849;AVGPOST=0.9921;RSQ=0.9871;ERATE=0.0010;THETA=0.0047;AC=1058;AN=2184 GT:DS:GL:BD 0.48443222 0
1 234525517 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.859;LDAF=0.0021;AVGPOST=0.9976;RSQ=0.5978;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234525525 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.922;LDAF=0.0171;AVGPOST=0.9982;RSQ=0.9627;ERATE=0.0005;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234525538 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.988;LDAF=0.0598;AVGPOST=0.9962;RSQ=0.9747;ERATE=0.0005;THETA=0.0005;AC=129;AN=2184 GT:DS:GL:BD 0.05906593 0
1 234525566 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9867;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234525749 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.945;LDAF=0.0044;AVGPOST=0.9995;RSQ=0.9564;ERATE=0.0003;THETA=0.0034;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234525765 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.779;LDAF=0.0011;AVGPOST=0.9986;RSQ=0.5029;ERATE=0.0006;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234525831 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.844;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234525881 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0811;AVGPOST=0.9974;RSQ=0.9881;ERATE=0.0014;THETA=0.0013;AC=175;AN=2184 GT:DS:GL:BD 0.08012821 0
1 234525940 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5788;AVGPOST=0.9955;RSQ=0.9934;ERATE=0.0014;THETA=0.0003;AC=1261;AN=2184 GT:DS:GL:BD 0.57738096 1
1 234525998 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6390;ERATE=0.0005;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234526135 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.789;LDAF=0.0077;AVGPOST=0.9970;RSQ=0.8377;ERATE=0.0003;THETA=0.0035;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234526355 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234526367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0024;AVGPOST=0.9989;RSQ=0.8048;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234526386 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0015;AVGPOST=0.9995;RSQ=0.8587;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234526542 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.6975;ERATE=0.0005;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234526552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0029;AVGPOST=0.9982;RSQ=0.7398;ERATE=0.0006;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234526611 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.642;LDAF=0.0054;AVGPOST=0.9970;RSQ=0.7781;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234526640 . TTA T 111 PASS INDEL;BAVGPOST=0.999;BRSQ=0.735;LDAF=0.0029;AVGPOST=0.9960;RSQ=0.4546;ERATE=0.0004;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234526709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0013;AVGPOST=0.9982;RSQ=0.3800;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234526732 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.985;BRSQ=0.975;LDAF=0.3155;AVGPOST=0.9960;RSQ=0.9934;ERATE=0.0006;THETA=0.0006;AC=688;AN=2184 GT:DS:GL:BD 0.31501833 0
1 234526868 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5921;AVGPOST=0.9985;RSQ=0.9974;ERATE=0.0006;THETA=0.0002;AC=1292;AN=2184 GT:DS:GL:BD 0.59157509 1
1 234526877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0059;AVGPOST=0.9994;RSQ=0.9617;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234526901 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.867;LDAF=0.0011;AVGPOST=0.9993;RSQ=0.7047;ERATE=0.0005;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234527028 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234527280 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0210;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234527319 . C CACAT 469 PASS INDEL;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0027;AVGPOST=0.9983;RSQ=0.7066;ERATE=0.0006;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234527344 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234527382 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234527537 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234527554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9773;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234527560 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234527562 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0155;AVGPOST=0.9999;RSQ=0.9976;ERATE=0.0003;THETA=0.0004;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234527575 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5104;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 234527649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8938;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234527667 . T TA 864 PASS INDEL;BAVGPOST=0.994;BRSQ=0.793;LDAF=0.0151;AVGPOST=0.9893;RSQ=0.7217;ERATE=0.0024;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234527726 . T TA 179 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7368;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234527988 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9499;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234527992 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5963;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0002;AC=1301;AN=2184 GT:DS:GL:BD 0.59569597 1
1 234528006 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5991;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0003;THETA=0.0007;AC=1307;AN=2184 GT:DS:GL:BD 0.59844321 1
1 234528035 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0083;AVGPOST=0.9998;RSQ=0.9894;ERATE=0.0003;THETA=0.0001;AC=18;AN=2184 GT:DS:GL:BD 0.00824176 0
1 234528077 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234528216 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234528251 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234528347 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234528348 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234528373 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5105;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0003;THETA=0.0003;AC=1113;AN=2184 GT:DS:GL:BD 0.50961536 1
1 234528397 . TA T 180 PASS INDEL;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0051;AVGPOST=0.9986;RSQ=0.8812;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234528402 . GAAAA G 473 PASS INDEL;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0044;AVGPOST=0.9993;RSQ=0.9298;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234528454 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.844;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8715;ERATE=0.0004;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234528614 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.507;LDAF=0.0063;AVGPOST=0.9949;RSQ=0.6670;ERATE=0.0008;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234528743 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0122;AVGPOST=0.9954;RSQ=0.8519;ERATE=0.0010;THETA=0.0002;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234528819 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.877;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9546;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234528850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234528996 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9622;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234529065 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234529377 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234529382 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234529432 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234529446 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0059;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234529508 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9756;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234529519 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1856;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 234529540 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1855;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0005;AC=405;AN=2184 GT:DS:GL:BD 0.18543956 0
1 234529552 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5129;AVGPOST=0.9998;RSQ=0.9997;ERATE=0.0005;THETA=0.0003;AC=1118;AN=2184 GT:DS:GL:BD 0.51190478 1
1 234529553 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7938;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234529569 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234529570 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.5069;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0006;AC=1105;AN=2184 GT:DS:GL:BD 0.50595236 1
1 234529735 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8218;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234529756 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7546;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234529839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9191;ERATE=0.0004;THETA=0.0009;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234529841 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6819;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234529850 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.7934;ERATE=0.0005;THETA=0.0023;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234529879 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.991;LDAF=0.0675;AVGPOST=0.9987;RSQ=0.9931;ERATE=0.0003;THETA=0.0002;AC=147;AN=2184 GT:DS:GL:BD 0.06730770 0
1 234529884 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.836;LDAF=0.0068;AVGPOST=0.9974;RSQ=0.8333;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234529971 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6796;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234530325 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5121;AVGPOST=0.9984;RSQ=0.9972;ERATE=0.0005;THETA=0.0004;AC=1116;AN=2184 GT:DS:GL:BD 0.51098901 1
1 234530361 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0074;AVGPOST=0.9983;RSQ=0.9199;ERATE=0.0004;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234530370 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.999;LDAF=0.5121;AVGPOST=0.9982;RSQ=0.9969;ERATE=0.0004;THETA=0.0004;AC=1116;AN=2184 GT:DS:GL:BD 0.51098901 1
1 234530488 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0024;AVGPOST=0.9993;RSQ=0.9035;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234530524 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0020;AVGPOST=0.9988;RSQ=0.8039;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234530587 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.742;LDAF=0.0023;AVGPOST=0.9985;RSQ=0.7164;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234530610 . A AGGT 36 PASS INDEL;BAVGPOST=0.999;BRSQ=0.815;LDAF=0.0032;AVGPOST=0.9974;RSQ=0.6762;ERATE=0.0005;THETA=0.0017;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234530613 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9988;RSQ=0.9224;ERATE=0.0003;THETA=0.0002;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234530639 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.757;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7051;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234530664 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.718;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.5392;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234530717 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8640;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234530740 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.997;LDAF=0.1897;AVGPOST=0.9947;RSQ=0.9879;ERATE=0.0006;THETA=0.0005;AC=412;AN=2184 GT:DS:GL:BD 0.18864469 0
1 234530790 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.724;LDAF=0.0053;AVGPOST=0.9955;RSQ=0.6715;ERATE=0.0013;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234530798 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9503;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234530820 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0779;AVGPOST=0.9991;RSQ=0.9955;ERATE=0.0003;THETA=0.0006;AC=171;AN=2184 GT:DS:GL:BD 0.07829671 0
1 234530884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0060;AVGPOST=0.9969;RSQ=0.8320;ERATE=0.0004;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234530918 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.811;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8116;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234530971 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0677;AVGPOST=0.9981;RSQ=0.9883;ERATE=0.0003;THETA=0.0007;AC=148;AN=2184 GT:DS:GL:BD 0.06776557 0
1 234531009 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5910;AVGPOST=0.9963;RSQ=0.9942;ERATE=0.0005;THETA=0.0004;AC=1290;AN=2184 GT:DS:GL:BD 0.59065932 1
1 234531146 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0044;AVGPOST=0.9996;RSQ=0.9664;ERATE=0.0003;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234531244 . C CAG 201 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9995;RSQ=0.5045;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234531246 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0172;AVGPOST=0.9995;RSQ=0.9864;ERATE=0.0004;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234531256 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5631;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234531274 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0074;AVGPOST=0.9999;RSQ=0.9940;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234531361 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7873;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234531637 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=1.0000;RSQ=0.9970;ERATE=0.0003;THETA=0.0027;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234531655 . A AAG 29 PASS INDEL;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6776;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234531687 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0073;AVGPOST=0.9996;RSQ=0.9789;ERATE=0.0003;THETA=0.0003;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234531760 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7163;ERATE=0.0003;THETA=0.0033;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234531926 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0088;AVGPOST=0.9997;RSQ=0.9852;ERATE=0.0003;THETA=0.0009;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234531949 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7645;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234531953 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7819;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234531986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8143;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234531993 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0102;AVGPOST=0.9995;RSQ=0.9847;ERATE=0.0003;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234532045 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6838;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234532119 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.5327;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234532122 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234532229 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.845;LDAF=0.0058;AVGPOST=0.9991;RSQ=0.9300;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234532271 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0020;AVGPOST=0.9997;RSQ=0.9244;ERATE=0.0003;THETA=0.0008;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234532272 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.918;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8015;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234532305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.820;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234532341 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0010;AVGPOST=0.9991;RSQ=0.6849;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234532349 . ACAAT A 130 PASS INDEL;BAVGPOST=1.000;BRSQ=0.860;LDAF=0.0013;AVGPOST=0.9984;RSQ=0.4997;ERATE=0.0004;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234532408 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7232;ERATE=0.0004;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234532438 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0034;AVGPOST=0.9995;RSQ=0.9294;ERATE=0.0004;THETA=0.0005;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234532501 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234532660 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0032;AVGPOST=0.9996;RSQ=0.9424;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234532719 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7200;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234532746 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.902;LDAF=0.0116;AVGPOST=0.9973;RSQ=0.9110;ERATE=0.0008;THETA=0.0004;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234532856 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0029;AVGPOST=0.9987;RSQ=0.8040;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234532895 . TA T 157 PASS INDEL;BAVGPOST=0.999;BRSQ=0.962;LDAF=0.0118;AVGPOST=0.9980;RSQ=0.9338;ERATE=0.0004;THETA=0.0005;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234532919 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.978;LDAF=0.2358;AVGPOST=0.9920;RSQ=0.9830;ERATE=0.0005;THETA=0.0007;AC=518;AN=2184 GT:DS:GL:BD 0.23717949 0
1 234532938 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0105;AVGPOST=0.9989;RSQ=0.9549;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234533006 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.283;LDAF=0.0640;AVGPOST=0.9121;RSQ=0.4461;ERATE=0.0060;THETA=0.0005;AC=85;AN=2184 GT:DS:GL:BD 0.03891942 0
1 234533168 . GA G 40 PASS INDEL;BAVGPOST=0.369;BRSQ=0.003;LDAF=0.2008;AVGPOST=0.7992;RSQ=0.5131;ERATE=0.0060;THETA=0.0004;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 234533443 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.856;BRSQ=0.089;LDAF=0.2001;AVGPOST=0.7057;RSQ=0.2249;ERATE=0.0250;THETA=0.0004;AC=157;AN=2184 GT:DS:GL:BD 0.07188645 0
1 234533460 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.862;BRSQ=0.103;LDAF=0.1889;AVGPOST=0.7449;RSQ=0.3303;ERATE=0.0150;THETA=0.0005;AC=232;AN=2184 GT:DS:GL:BD 0.10622711 0
1 234533551 . GGAA G 28 PASS INDEL;BAVGPOST=0.396;BRSQ=0.005;LDAF=0.3204;AVGPOST=0.7714;RSQ=0.5756;ERATE=0.0082;THETA=0.0005;AC=644;AN=2184 GT:DS:GL:BD 0.29487181 0
1 234533571 . GA G 719 PASS INDEL;BAVGPOST=0.762;BRSQ=0.014;LDAF=0.8319;AVGPOST=0.7397;RSQ=0.2444;ERATE=0.0162;THETA=0.0010;AC=2014;AN=2184 GT:DS:GL:BD 0.92216116 1
1 234533590 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.917;BRSQ=0.763;LDAF=0.2348;AVGPOST=0.8807;RSQ=0.7425;ERATE=0.0121;THETA=0.0008;AC=472;AN=2184 GT:DS:GL:BD 0.21611722 0
1 234533662 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.871;LDAF=0.0048;AVGPOST=0.9986;RSQ=0.8757;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234533716 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.842;LDAF=0.0017;AVGPOST=0.9982;RSQ=0.5677;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234533837 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.965;LDAF=0.7357;AVGPOST=0.9860;RSQ=0.9769;ERATE=0.0004;THETA=0.0008;AC=1611;AN=2184 GT:DS:GL:BD 0.73763734 1
1 234534116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0101;AVGPOST=1.0000;RSQ=0.9980;ERATE=0.0003;THETA=0.0022;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234534227 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8890;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234534241 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234534538 . TCTAA T 3044 PASS INDEL;BAVGPOST=0.997;BRSQ=0.914;LDAF=0.0158;AVGPOST=0.9980;RSQ=0.9443;ERATE=0.0004;THETA=0.0011;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234534594 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234534705 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0030;AVGPOST=0.9986;RSQ=0.8253;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234534763 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.2345;AVGPOST=0.9898;RSQ=0.9791;ERATE=0.0004;THETA=0.0010;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 234534841 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.954;LDAF=0.0428;AVGPOST=0.9958;RSQ=0.9637;ERATE=0.0003;THETA=0.0005;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 234534909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7593;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234535097 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.951;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234535113 . A ACAATG 1320 PASS INDEL;BAVGPOST=0.997;BRSQ=0.821;LDAF=0.0042;AVGPOST=0.9995;RSQ=0.9377;ERATE=0.0003;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234535162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0037;AVGPOST=0.9998;RSQ=0.9803;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234535211 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234535223 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.984;LDAF=0.0492;AVGPOST=0.9973;RSQ=0.9793;ERATE=0.0004;THETA=0.0006;AC=105;AN=2184 GT:DS:GL:BD 0.04807692 0
1 234535689 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.715;LDAF=0.0042;AVGPOST=0.9957;RSQ=0.5750;ERATE=0.0006;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234535762 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.454;LDAF=0.0063;AVGPOST=0.9911;RSQ=0.4770;ERATE=0.0010;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234535772 . T TA 15 PASS INDEL;BAVGPOST=0.999;BRSQ=0.599;LDAF=0.0029;AVGPOST=0.9959;RSQ=0.4420;ERATE=0.0007;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234535850 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8434;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234536031 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.970;LDAF=0.0171;AVGPOST=0.9990;RSQ=0.9739;ERATE=0.0004;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234536035 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234536051 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9450;ERATE=0.0004;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234536124 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=0.9996;RSQ=0.8057;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234536127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5451;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234536130 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234536241 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.673;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6229;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234536301 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.885;LDAF=0.0019;AVGPOST=0.9993;RSQ=0.8471;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234536382 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.942;LDAF=0.0067;AVGPOST=0.9992;RSQ=0.9538;ERATE=0.0003;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234536420 rs112519559 CATA C 404 PASS INDEL;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9324;ERATE=0.0005;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234536491 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.0713;AVGPOST=0.9984;RSQ=0.9908;ERATE=0.0003;THETA=0.0011;AC=155;AN=2184 GT:DS:GL:BD 0.07097070 0
1 234536514 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6495;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234536916 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234536986 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9809;ERATE=0.0003;THETA=0.0026;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234537101 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6829;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234537195 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0033;AVGPOST=0.9998;RSQ=0.9677;ERATE=0.0003;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234537257 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234537531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.5818;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234537588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.977;LDAF=0.0382;AVGPOST=0.9987;RSQ=0.9864;ERATE=0.0004;THETA=0.0037;AC=83;AN=2184 GT:DS:GL:BD 0.03800366 0
1 234537637 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.920;LDAF=0.0009;AVGPOST=0.9993;RSQ=0.6968;ERATE=0.0003;THETA=0.0009;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234537895 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8100;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234537902 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0018;AVGPOST=0.9992;RSQ=0.8130;ERATE=0.0003;THETA=0.0013;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234537924 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.980;LDAF=0.0576;AVGPOST=0.9993;RSQ=0.9942;ERATE=0.0003;THETA=0.0004;AC=126;AN=2184 GT:DS:GL:BD 0.05769231 0
1 234537992 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.995;LDAF=0.2352;AVGPOST=0.9960;RSQ=0.9915;ERATE=0.0009;THETA=0.0094;AC=512;AN=2184 GT:DS:GL:BD 0.23443224 0
1 234538109 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0582;AVGPOST=0.9992;RSQ=0.9939;ERATE=0.0003;THETA=0.0125;AC=127;AN=2184 GT:DS:GL:BD 0.05815018 0
1 234538133 . A AT 1443 PASS INDEL;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0141;AVGPOST=0.9957;RSQ=0.8810;ERATE=0.0004;THETA=0.0054;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234538155 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0034;AVGPOST=0.9996;RSQ=0.9490;ERATE=0.0003;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234538228 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.612;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234538311 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.984;LDAF=0.2329;AVGPOST=0.9912;RSQ=0.9815;ERATE=0.0007;THETA=0.0043;AC=505;AN=2184 GT:DS:GL:BD 0.23122710 0
1 234538321 . GTTT G 602 PASS INDEL;BAVGPOST=0.988;BRSQ=0.652;LDAF=0.0097;AVGPOST=0.9924;RSQ=0.7010;ERATE=0.0009;THETA=0.0014;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234538322 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.981;BRSQ=0.966;LDAF=0.2107;AVGPOST=0.9861;RSQ=0.9700;ERATE=0.0010;THETA=0.0005;AC=458;AN=2184 GT:DS:GL:BD 0.20970696 0
1 234538329 . G GT 1238 PASS INDEL;BAVGPOST=0.964;BRSQ=0.642;LDAF=0.0842;AVGPOST=0.9148;RSQ=0.5454;ERATE=0.0191;THETA=0.0014;AC=131;AN=2184 GT:DS:GL:BD 0.05998169 0
1 234538348 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.684;LDAF=0.0022;AVGPOST=0.9971;RSQ=0.4786;ERATE=0.0003;THETA=0.0127;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234538394 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.771;LDAF=0.0014;AVGPOST=0.9982;RSQ=0.4385;ERATE=0.0005;THETA=0.0122;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234538484 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.4664;ERATE=0.0004;THETA=0.0023;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234538524 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.988;LDAF=0.1144;AVGPOST=0.9925;RSQ=0.9712;ERATE=0.0005;THETA=0.0120;AC=246;AN=2184 GT:DS:GL:BD 0.11263736 0
1 234538565 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0035;AVGPOST=0.9973;RSQ=0.7123;ERATE=0.0003;THETA=0.0047;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234538585 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0034;AVGPOST=0.9978;RSQ=0.7517;ERATE=0.0004;THETA=0.0140;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234538681 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.875;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5995;ERATE=0.0004;THETA=0.0035;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234538703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0034;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234538841 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.822;LDAF=0.0033;AVGPOST=0.9995;RSQ=0.9217;ERATE=0.0003;THETA=0.0111;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234538961 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0207;AVGPOST=0.9996;RSQ=0.9912;ERATE=0.0004;THETA=0.0102;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234539032 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9311;ERATE=0.0003;THETA=0.0024;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234539097 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0295;AVGPOST=0.9987;RSQ=0.9822;ERATE=0.0004;THETA=0.0066;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 234539157 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.4774;AVGPOST=0.9930;RSQ=0.9886;ERATE=0.0004;THETA=0.0006;AC=1040;AN=2184 GT:DS:GL:BD 0.47619048 0
1 234539414 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.872;LDAF=0.0069;AVGPOST=0.9986;RSQ=0.9095;ERATE=0.0004;THETA=0.0009;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234539422 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.6658;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234539467 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.686;LDAF=0.0034;AVGPOST=0.9972;RSQ=0.7102;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234539491 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.530;LDAF=0.0041;AVGPOST=0.9957;RSQ=0.5807;ERATE=0.0007;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234539495 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.859;LDAF=0.0076;AVGPOST=0.9966;RSQ=0.8407;ERATE=0.0004;THETA=0.0027;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234539588 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.929;LDAF=0.0025;AVGPOST=0.9994;RSQ=0.8882;ERATE=0.0004;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234539593 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.862;LDAF=0.0037;AVGPOST=0.9972;RSQ=0.6996;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234539672 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.785;LDAF=0.0035;AVGPOST=0.9968;RSQ=0.6752;ERATE=0.0004;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234539734 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.748;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7309;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234539806 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.955;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8264;ERATE=0.0003;THETA=0.0009;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234539834 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0051;AVGPOST=0.9988;RSQ=0.9077;ERATE=0.0003;THETA=0.0002;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234539874 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9448;ERATE=0.0006;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234539938 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9385;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234540041 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0012;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0004;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234540126 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0124;AVGPOST=0.9988;RSQ=0.9594;ERATE=0.0005;THETA=0.0033;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234540153 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234540172 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0161;AVGPOST=0.9985;RSQ=0.9684;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234540187 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8064;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234540321 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8845;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234540334 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9328;ERATE=0.0004;THETA=0.0020;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234540365 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7759;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234540466 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.990;LDAF=0.2062;AVGPOST=0.9965;RSQ=0.9911;ERATE=0.0009;THETA=0.0008;AC=450;AN=2184 GT:DS:GL:BD 0.20604396 0
1 234540507 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9117;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234540543 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234540547 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.992;LDAF=0.5321;AVGPOST=0.9935;RSQ=0.9900;ERATE=0.0010;THETA=0.0002;AC=1158;AN=2184 GT:DS:GL:BD 0.53021979 1
1 234540876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0018;AVGPOST=0.9975;RSQ=0.6024;ERATE=0.0003;THETA=0.0053;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234540977 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0052;AVGPOST=0.9997;RSQ=0.9708;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234541055 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.919;LDAF=0.0007;AVGPOST=0.9989;RSQ=0.4584;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234541057 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9405;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234541107 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0055;AVGPOST=0.9990;RSQ=0.9271;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234541124 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0302;AVGPOST=0.9976;RSQ=0.9676;ERATE=0.0004;THETA=0.0007;AC=64;AN=2184 GT:DS:GL:BD 0.02930403 0
1 234541162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0063;AVGPOST=0.9995;RSQ=0.9727;ERATE=0.0003;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234541230 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.835;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6915;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234541248 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2067;AVGPOST=0.9987;RSQ=0.9969;ERATE=0.0003;THETA=0.0006;AC=451;AN=2184 GT:DS:GL:BD 0.20650183 0
1 234541283 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0034;AVGPOST=0.9987;RSQ=0.8789;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234541320 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234541457 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0050;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234541488 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=0.9952;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234541514 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.854;LDAF=0.0017;AVGPOST=0.9994;RSQ=0.8426;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234541601 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234541622 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2391;AVGPOST=0.9999;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=522;AN=2184 GT:DS:GL:BD 0.23901099 0
1 234541792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0002;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234541801 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1078;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0007;AC=235;AN=2184 GT:DS:GL:BD 0.10760073 0
1 234541945 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234541972 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234541978 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0992;AVGPOST=0.9999;RSQ=0.9995;ERATE=0.0003;THETA=0.0003;AC=216;AN=2184 GT:DS:GL:BD 0.09890110 0
1 234541984 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234542094 . G GC 74 PASS INDEL;BAVGPOST=0.999;BRSQ=0.685;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6766;ERATE=0.0004;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234542100 . C CAT 114 PASS INDEL;BAVGPOST=1.000;BRSQ=0.815;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5368;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234542164 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9633;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234542225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1124;AVGPOST=0.9985;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=243;AN=2184 GT:DS:GL:BD 0.11126374 0
1 234542227 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.983;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234542310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234542443 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9988;RSQ=0.4694;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234542494 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.892;LDAF=0.0137;AVGPOST=0.9958;RSQ=0.8856;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234542519 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234542610 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234542646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6141;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234542652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.649;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5445;ERATE=0.0005;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234542793 rs111594417 CTT C 419 PASS INDEL;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9375;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234542829 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234542870 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234543162 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.951;LDAF=0.0084;AVGPOST=0.9987;RSQ=0.9358;ERATE=0.0005;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234543205 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.936;LDAF=0.0074;AVGPOST=0.9995;RSQ=0.9704;ERATE=0.0003;THETA=0.0005;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234543268 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0025;AVGPOST=0.9992;RSQ=0.8446;ERATE=0.0004;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234543413 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.893;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6689;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234543499 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.864;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234543716 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9612;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234543757 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0004;AVGPOST=0.9996;RSQ=0.6023;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234543762 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.779;LDAF=0.0032;AVGPOST=0.9981;RSQ=0.7654;ERATE=0.0004;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234543784 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234543839 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234543878 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.985;LDAF=0.0535;AVGPOST=0.9995;RSQ=0.9953;ERATE=0.0003;THETA=0.0003;AC=117;AN=2184 GT:DS:GL:BD 0.05357143 0
1 234543954 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4225;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234543972 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0064;AVGPOST=0.9994;RSQ=0.9544;ERATE=0.0004;THETA=0.0003;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234544097 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0012;AVGPOST=0.9983;RSQ=0.5043;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234544150 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.912;LDAF=0.0042;AVGPOST=0.9996;RSQ=0.9584;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234544305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0260;AVGPOST=0.9998;RSQ=0.9962;ERATE=0.0003;THETA=0.0003;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234544341 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0061;AVGPOST=0.9996;RSQ=0.9713;ERATE=0.0003;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234544367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.771;LDAF=0.0056;AVGPOST=0.9973;RSQ=0.7880;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234544390 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0016;AVGPOST=0.9995;RSQ=0.8710;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234544565 . G GT 21 PASS INDEL;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234544654 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0017;AVGPOST=0.9993;RSQ=0.8248;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234544666 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234544687 . CGT C 138 PASS INDEL;BAVGPOST=0.999;BRSQ=0.836;LDAF=0.0027;AVGPOST=0.9992;RSQ=0.8802;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234544825 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0010;AVGPOST=0.9995;RSQ=0.7635;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234545006 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.747;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5142;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234545007 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9524;ERATE=0.0003;THETA=0.0008;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234545029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234545124 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234545176 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.939;LDAF=0.0120;AVGPOST=0.9997;RSQ=0.9891;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234545380 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.900;LDAF=0.0030;AVGPOST=0.9985;RSQ=0.8067;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234545441 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.781;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.7793;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234545502 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0015;AVGPOST=0.9988;RSQ=0.6672;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234545526 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.727;LDAF=0.0056;AVGPOST=0.9979;RSQ=0.8496;ERATE=0.0004;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234545599 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234545672 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.874;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234545730 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.782;LDAF=0.0047;AVGPOST=0.9990;RSQ=0.9072;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234545761 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0005;AVGPOST=0.9996;RSQ=0.6872;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234545928 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1368;AVGPOST=0.9994;RSQ=0.9975;ERATE=0.0004;THETA=0.0003;AC=297;AN=2184 GT:DS:GL:BD 0.13598901 0
1 234545962 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234546014 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0277;AVGPOST=0.9994;RSQ=0.9893;ERATE=0.0004;THETA=0.0004;AC=60;AN=2184 GT:DS:GL:BD 0.02747253 0
1 234546072 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0028;AVGPOST=1.0000;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234546121 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0055;AVGPOST=0.9999;RSQ=0.9921;ERATE=0.0003;THETA=0.0003;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234546144 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234546225 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234546239 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234546244 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234546245 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3606;AVGPOST=0.9998;RSQ=0.9995;ERATE=0.0010;THETA=0.0003;AC=786;AN=2184 GT:DS:GL:BD 0.35989010 0
1 234546246 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8496;ERATE=0.0005;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234546345 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234546354 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0434;AVGPOST=0.9999;RSQ=0.9986;ERATE=0.0003;THETA=0.0005;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 234546384 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.991;LDAF=0.1065;AVGPOST=0.9963;RSQ=0.9844;ERATE=0.0017;THETA=0.0003;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234546403 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234546497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234546503 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6495;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234546515 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0014;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234546522 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0026;AVGPOST=0.9990;RSQ=0.8851;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234546684 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.898;LDAF=0.0061;AVGPOST=0.9985;RSQ=0.9026;ERATE=0.0003;THETA=0.0002;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234546799 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.846;LDAF=0.0024;AVGPOST=0.9988;RSQ=0.8038;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234546815 . C CA 113 PASS INDEL;BAVGPOST=0.990;BRSQ=0.612;LDAF=0.0219;AVGPOST=0.9725;RSQ=0.4870;ERATE=0.0060;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234546825 . CAT C 97 PASS INDEL;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8119;ERATE=0.0003;THETA=0.0013;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234546849 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.882;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9443;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234546859 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0202;AVGPOST=0.9998;RSQ=0.9945;ERATE=0.0003;THETA=0.0003;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234546908 rs113228922 CA C 11117 PASS INDEL;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.1164;AVGPOST=0.9964;RSQ=0.9858;ERATE=0.0006;THETA=0.0003;AC=251;AN=2184 GT:DS:GL:BD 0.11492674 0
1 234546985 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0010;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234547075 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.810;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.6951;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234547111 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234547112 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0043;AVGPOST=0.9976;RSQ=0.7878;ERATE=0.0004;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234547256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0191;AVGPOST=0.9999;RSQ=0.9968;ERATE=0.0003;THETA=0.0003;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234547262 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.952;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234547279 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0191;AVGPOST=0.9998;RSQ=0.9957;ERATE=0.0003;THETA=0.0002;AC=42;AN=2184 GT:DS:GL:BD 0.01923077 0
1 234547304 . G GC 258 PASS INDEL;BAVGPOST=1.000;BRSQ=0.778;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234547362 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.904;LDAF=0.0040;AVGPOST=0.9993;RSQ=0.9327;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234547373 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8758;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234547409 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9063;ERATE=0.0003;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234547435 . G GAAA 458 PASS INDEL;BAVGPOST=0.999;BRSQ=0.766;LDAF=0.0024;AVGPOST=0.9982;RSQ=0.7090;ERATE=0.0004;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234547462 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.838;LDAF=0.0010;AVGPOST=0.9990;RSQ=0.6088;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234547686 . TA T 404 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0056;AVGPOST=0.9989;RSQ=0.9224;ERATE=0.0004;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234547790 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0057;AVGPOST=0.9996;RSQ=0.9690;ERATE=0.0003;THETA=0.0005;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234547927 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.836;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8204;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234548105 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0220;AVGPOST=0.9961;RSQ=0.9253;ERATE=0.0006;THETA=0.0002;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234548163 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1023;AVGPOST=0.9950;RSQ=0.9781;ERATE=0.0008;THETA=0.0003;AC=219;AN=2184 GT:DS:GL:BD 0.10027473 0
1 234548250 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.663;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5871;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234548308 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1143;AVGPOST=0.9980;RSQ=0.9914;ERATE=0.0005;THETA=0.0006;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 234548534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0019;AVGPOST=0.9998;RSQ=0.9439;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234548717 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0048;AVGPOST=0.9994;RSQ=0.9418;ERATE=0.0004;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234548758 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.871;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6100;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234548761 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.633;LDAF=0.0020;AVGPOST=0.9985;RSQ=0.7159;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234548802 . GC G 12 PASS INDEL;BAVGPOST=0.973;BRSQ=0.086;LDAF=0.0748;AVGPOST=0.8979;RSQ=0.4284;ERATE=0.0025;THETA=0.0004;AC=80;AN=2184 GT:DS:GL:BD 0.03663004 0
1 234548854 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.946;LDAF=0.2412;AVGPOST=0.9639;RSQ=0.9269;ERATE=0.0107;THETA=0.0003;AC=506;AN=2184 GT:DS:GL:BD 0.23168498 0
1 234548945 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9640;ERATE=0.0003;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234549089 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9019;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234549094 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.966;LDAF=0.0468;AVGPOST=0.9966;RSQ=0.9701;ERATE=0.0004;THETA=0.0003;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 234549134 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0069;AVGPOST=0.9988;RSQ=0.9183;ERATE=0.0005;THETA=0.0005;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234549168 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.600;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7048;ERATE=0.0004;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234549208 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234549221 rs71170481 A AAAAAC 45498 PASS INDEL;BAVGPOST=0.969;BRSQ=0.935;LDAF=0.3039;AVGPOST=0.9799;RSQ=0.9640;ERATE=0.0019;THETA=0.0007;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234549277 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8664;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234549372 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0023;AVGPOST=0.9984;RSQ=0.7807;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234549382 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234549534 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6199;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234549566 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.917;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8069;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234549774 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234549894 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7844;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234549907 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6465;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234549983 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0034;AVGPOST=0.9997;RSQ=0.9545;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234549984 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0069;AVGPOST=0.9998;RSQ=0.9872;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234550215 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9567;ERATE=0.0003;THETA=0.0017;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234550309 . CAGA C 71 PASS INDEL;BAVGPOST=0.999;BRSQ=0.729;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.7998;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234550430 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.877;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0004;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234550443 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0016;AVGPOST=0.9979;RSQ=0.5513;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234550499 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.749;LDAF=0.0663;AVGPOST=0.9568;RSQ=0.7024;ERATE=0.0265;THETA=0.0002;AC=110;AN=2184 GT:DS:GL:BD 0.05036630 0
1 234550502 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.2208;AVGPOST=0.9964;RSQ=0.9910;ERATE=0.0005;THETA=0.0006;AC=484;AN=2184 GT:DS:GL:BD 0.22161172 0
1 234550591 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.1149;AVGPOST=0.9936;RSQ=0.9748;ERATE=0.0007;THETA=0.0003;AC=248;AN=2184 GT:DS:GL:BD 0.11355311 0
1 234550620 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.2237;AVGPOST=0.9972;RSQ=0.9931;ERATE=0.0004;THETA=0.0004;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 234550637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.737;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234550673 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.856;LDAF=0.0040;AVGPOST=0.9983;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234550709 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0504;AVGPOST=0.9982;RSQ=0.9838;ERATE=0.0005;THETA=0.0002;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234550716 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.949;LDAF=0.0064;AVGPOST=0.9981;RSQ=0.9080;ERATE=0.0004;THETA=0.0006;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234550734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0135;AVGPOST=0.9995;RSQ=0.9833;ERATE=0.0003;THETA=0.0008;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234550755 rs112259002 T TA 10716 PASS INDEL;BAVGPOST=0.989;BRSQ=0.951;LDAF=0.1226;AVGPOST=0.9777;RSQ=0.9188;ERATE=0.0048;THETA=0.0003;AC=257;AN=2184 GT:DS:GL:BD 0.11767399 0
1 234550863 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2232;AVGPOST=0.9956;RSQ=0.9916;ERATE=0.0005;THETA=0.0002;AC=488;AN=2184 GT:DS:GL:BD 0.22344323 0
1 234550893 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234550934 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.880;LDAF=0.0044;AVGPOST=0.9994;RSQ=0.9348;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234550957 . A AT 213 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0003;THETA=0.0019;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234551199 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234551247 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234551346 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.980;LDAF=0.0436;AVGPOST=0.9984;RSQ=0.9869;ERATE=0.0006;THETA=0.0003;AC=95;AN=2184 GT:DS:GL:BD 0.04349817 0
1 234551395 . T TA 1037 PASS INDEL;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0083;AVGPOST=0.9986;RSQ=0.9197;ERATE=0.0003;THETA=0.0004;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234551475 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0103;AVGPOST=0.9994;RSQ=0.9754;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234551520 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0504;AVGPOST=0.9985;RSQ=0.9876;ERATE=0.0004;THETA=0.0002;AC=109;AN=2184 GT:DS:GL:BD 0.04990843 0
1 234551603 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2202;AVGPOST=0.9987;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=481;AN=2184 GT:DS:GL:BD 0.22023809 0
1 234551623 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0261;AVGPOST=0.9995;RSQ=0.9919;ERATE=0.0003;THETA=0.0002;AC=57;AN=2184 GT:DS:GL:BD 0.02609890 0
1 234551624 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2193;AVGPOST=0.9975;RSQ=0.9947;ERATE=0.0005;THETA=0.0003;AC=478;AN=2184 GT:DS:GL:BD 0.21886447 0
1 234551651 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8474;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234551757 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0059;AVGPOST=0.9992;RSQ=0.9416;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234551812 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2239;AVGPOST=0.9989;RSQ=0.9974;ERATE=0.0004;THETA=0.0011;AC=489;AN=2184 GT:DS:GL:BD 0.22390109 0
1 234552011 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.3375;AVGPOST=0.9958;RSQ=0.9930;ERATE=0.0006;THETA=0.0006;AC=736;AN=2184 GT:DS:GL:BD 0.33699635 0
1 234552033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.6257;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234552081 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8942;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234552165 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.992;LDAF=0.0214;AVGPOST=0.9993;RSQ=0.9843;ERATE=0.0003;THETA=0.0044;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234552232 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.673;LDAF=0.0043;AVGPOST=0.9970;RSQ=0.7281;ERATE=0.0003;THETA=0.0001;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234552285 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0257;AVGPOST=0.9987;RSQ=0.9817;ERATE=0.0004;THETA=0.0004;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234552363 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.964;LDAF=0.0101;AVGPOST=0.9998;RSQ=0.9913;ERATE=0.0003;THETA=0.0005;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234552449 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.772;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.8965;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234552462 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0021;AVGPOST=0.9993;RSQ=0.8451;ERATE=0.0003;THETA=0.0016;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234552490 . TG T 725 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0070;AVGPOST=0.9996;RSQ=0.9756;ERATE=0.0003;THETA=0.0013;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234552541 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.966;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9157;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234552563 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6553;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234552621 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.931;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6134;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234552657 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234552794 . TGA T 13 PASS INDEL;BAVGPOST=1.000;BRSQ=0.833;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5263;ERATE=0.0004;THETA=0.0008;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234552922 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.8986;ERATE=0.0004;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234553142 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0045;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234553144 . A AT 11 PASS INDEL;BAVGPOST=1.000;BRSQ=0.831;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.7918;ERATE=0.0003;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234553171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0167;AVGPOST=0.9994;RSQ=0.9847;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234553314 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.905;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5542;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234553352 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5328;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234553362 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.883;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234553369 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.994;LDAF=0.0465;AVGPOST=0.9989;RSQ=0.9908;ERATE=0.0003;THETA=0.0006;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 234553407 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.0167;AVGPOST=0.9993;RSQ=0.9813;ERATE=0.0003;THETA=0.0005;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234553442 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0177;AVGPOST=0.9993;RSQ=0.9823;ERATE=0.0003;THETA=0.0025;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234553481 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0103;AVGPOST=0.9995;RSQ=0.9752;ERATE=0.0003;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234553639 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0014;AVGPOST=0.9985;RSQ=0.6021;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234553643 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0030;AVGPOST=0.9995;RSQ=0.9177;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234553681 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.941;LDAF=0.0080;AVGPOST=0.9985;RSQ=0.9252;ERATE=0.0004;THETA=0.0028;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234553688 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.947;LDAF=0.0079;AVGPOST=0.9989;RSQ=0.9495;ERATE=0.0003;THETA=0.0006;AC=16;AN=2184 GT:DS:GL:BD 0.00732601 0
1 234553920 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234553929 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0101;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234553997 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0028;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234554261 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.981;LDAF=0.0166;AVGPOST=0.9998;RSQ=0.9937;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234554360 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0052;AVGPOST=0.9989;RSQ=0.9281;ERATE=0.0003;THETA=0.0008;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234554533 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0037;AVGPOST=0.9992;RSQ=0.9115;ERATE=0.0003;THETA=0.0013;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234554561 . C CG 6 PASS INDEL;BAVGPOST=1.000;BRSQ=0.713;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6133;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234554599 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.0986;AVGPOST=0.9967;RSQ=0.9860;ERATE=0.0004;THETA=0.0006;AC=214;AN=2184 GT:DS:GL:BD 0.09798535 0
1 234554645 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.852;LDAF=0.0032;AVGPOST=0.9972;RSQ=0.6023;ERATE=0.0010;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234554647 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0026;AVGPOST=0.9985;RSQ=0.7763;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234554656 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.989;LDAF=0.0301;AVGPOST=0.9963;RSQ=0.9523;ERATE=0.0005;THETA=0.0007;AC=63;AN=2184 GT:DS:GL:BD 0.02884615 0
1 234554679 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0160;AVGPOST=0.9936;RSQ=0.8407;ERATE=0.0008;THETA=0.0002;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234554680 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.969;LDAF=0.0236;AVGPOST=0.9936;RSQ=0.9018;ERATE=0.0008;THETA=0.0009;AC=45;AN=2184 GT:DS:GL:BD 0.02060440 0
1 234554718 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.916;LDAF=0.0063;AVGPOST=0.9947;RSQ=0.6666;ERATE=0.0006;THETA=0.0005;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234554795 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.983;LDAF=0.1682;AVGPOST=0.9822;RSQ=0.9502;ERATE=0.0012;THETA=0.0002;AC=364;AN=2184 GT:DS:GL:BD 0.16666667 0
1 234554811 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.978;BRSQ=0.930;LDAF=0.1701;AVGPOST=0.9760;RSQ=0.9402;ERATE=0.0016;THETA=0.0004;AC=357;AN=2184 GT:DS:GL:BD 0.16346154 0
1 234554863 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0251;AVGPOST=0.9935;RSQ=0.8957;ERATE=0.0007;THETA=0.0006;AC=52;AN=2184 GT:DS:GL:BD 0.02380952 0
1 234554874 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.768;LDAF=0.0033;AVGPOST=0.9967;RSQ=0.5995;ERATE=0.0004;THETA=0.0014;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234554875 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.763;LDAF=0.0071;AVGPOST=0.9945;RSQ=0.6825;ERATE=0.0007;THETA=0.0004;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234554876 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.757;LDAF=0.0084;AVGPOST=0.9913;RSQ=0.5557;ERATE=0.0012;THETA=0.0002;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234554934 . AAAAAT A 865 PASS INDEL;BAVGPOST=0.999;BRSQ=0.928;LDAF=0.0093;AVGPOST=0.9921;RSQ=0.6716;ERATE=0.0004;THETA=0.0007;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234554977 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0026;AVGPOST=0.9982;RSQ=0.7336;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234554984 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0060;AVGPOST=0.9980;RSQ=0.8602;ERATE=0.0003;THETA=0.0007;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234555115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0284;AVGPOST=0.9990;RSQ=0.9842;ERATE=0.0003;THETA=0.0006;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 234555123 . ATCAT A 242 PASS INDEL;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.8700;ERATE=0.0004;THETA=0.0005;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234555151 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.789;LDAF=0.0009;AVGPOST=0.9991;RSQ=0.6108;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234555152 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.808;LDAF=0.0068;AVGPOST=0.9990;RSQ=0.9330;ERATE=0.0003;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234555180 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8646;ERATE=0.0003;THETA=0.0024;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234555256 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.977;LDAF=0.0164;AVGPOST=0.9972;RSQ=0.9312;ERATE=0.0005;THETA=0.0005;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234555310 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3265;AVGPOST=0.9971;RSQ=0.9947;ERATE=0.0008;THETA=0.0004;AC=713;AN=2184 GT:DS:GL:BD 0.32646519 0
1 234555337 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8803;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234555377 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0011;AVGPOST=0.9994;RSQ=0.7320;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234555405 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.992;LDAF=0.5508;AVGPOST=0.9911;RSQ=0.9867;ERATE=0.0022;THETA=0.0003;AC=1200;AN=2184 GT:DS:GL:BD 0.54945058 1
1 234555447 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2981;AVGPOST=0.9979;RSQ=0.9965;ERATE=0.0004;THETA=0.0012;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 234555529 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.0142;AVGPOST=0.9990;RSQ=0.9715;ERATE=0.0003;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234555601 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5157;ERATE=0.0004;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234555639 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.651;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6904;ERATE=0.0003;THETA=0.0011;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234555844 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.873;LDAF=0.0012;AVGPOST=0.9990;RSQ=0.6343;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234556084 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.917;LDAF=0.0022;AVGPOST=0.9999;RSQ=0.9816;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234556098 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0183;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0004;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234556181 . TTAA T 629 PASS INDEL;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0178;AVGPOST=0.9985;RSQ=0.9613;ERATE=0.0003;THETA=0.0004;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234556182 rs111862696 TAAA T 2749 PASS INDEL;BAVGPOST=0.997;BRSQ=0.901;LDAF=0.0186;AVGPOST=0.9987;RSQ=0.9673;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234556263 . AC A 1589 PASS INDEL;BAVGPOST=0.998;BRSQ=0.930;LDAF=0.0139;AVGPOST=0.9992;RSQ=0.9746;ERATE=0.0004;THETA=0.0004;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234556362 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0606;AVGPOST=0.9987;RSQ=0.9911;ERATE=0.0003;THETA=0.0004;AC=130;AN=2184 GT:DS:GL:BD 0.05952381 0
1 234556530 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234556630 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3084;AVGPOST=0.9996;RSQ=0.9992;ERATE=0.0003;THETA=0.0002;AC=673;AN=2184 GT:DS:GL:BD 0.30815017 0
1 234556646 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3081;AVGPOST=0.9996;RSQ=0.9993;ERATE=0.0004;THETA=0.0003;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234556698 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0019;AVGPOST=0.9999;RSQ=0.9767;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234556761 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234556774 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.990;LDAF=0.3069;AVGPOST=0.9985;RSQ=0.9971;ERATE=0.0003;THETA=0.0004;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234556836 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.927;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9336;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234556948 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.555;LDAF=0.0038;AVGPOST=0.9970;RSQ=0.7101;ERATE=0.0003;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234556984 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.971;LDAF=0.3001;AVGPOST=0.9912;RSQ=0.9836;ERATE=0.0011;THETA=0.0002;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234556991 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.688;LDAF=0.0021;AVGPOST=0.9984;RSQ=0.6519;ERATE=0.0005;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234557171 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3077;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0007;THETA=0.0003;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234557319 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0033;AVGPOST=0.9994;RSQ=0.9220;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234557333 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.950;LDAF=0.0025;AVGPOST=0.9995;RSQ=0.9159;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234557360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3076;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0003;THETA=0.0002;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234557421 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.944;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234557443 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.939;LDAF=0.0007;AVGPOST=0.9993;RSQ=0.5591;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234557455 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.864;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.7985;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234557501 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.678;LDAF=0.0028;AVGPOST=0.9998;RSQ=0.9687;ERATE=0.0003;THETA=0.0008;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234557567 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.964;LDAF=0.0020;AVGPOST=0.9996;RSQ=0.9213;ERATE=0.0003;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234557594 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8497;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234557771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0039;AVGPOST=0.9991;RSQ=0.8986;ERATE=0.0004;THETA=0.0014;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234557918 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.3006;AVGPOST=0.9974;RSQ=0.9956;ERATE=0.0006;THETA=0.0005;AC=655;AN=2184 GT:DS:GL:BD 0.29990843 0
1 234558150 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9122;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234558156 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9107;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234558168 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.987;LDAF=0.4612;AVGPOST=0.9912;RSQ=0.9869;ERATE=0.0003;THETA=0.0005;AC=1008;AN=2184 GT:DS:GL:BD 0.46153846 0
1 234558222 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.902;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234558430 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.3098;AVGPOST=0.9956;RSQ=0.9917;ERATE=0.0010;THETA=0.0011;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234558482 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.681;LDAF=0.0017;AVGPOST=0.9988;RSQ=0.6908;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234558607 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.992;LDAF=0.0663;AVGPOST=0.9977;RSQ=0.9849;ERATE=0.0005;THETA=0.0005;AC=144;AN=2184 GT:DS:GL:BD 0.06593407 0
1 234558701 . G GT 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.765;LDAF=0.0016;AVGPOST=0.9985;RSQ=0.6022;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234558771 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.986;LDAF=0.3081;AVGPOST=0.9977;RSQ=0.9952;ERATE=0.0007;THETA=0.0005;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234558776 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0042;AVGPOST=0.9981;RSQ=0.8356;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234558799 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0022;AVGPOST=0.9992;RSQ=0.8432;ERATE=0.0003;THETA=0.0006;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234558830 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.905;LDAF=0.0033;AVGPOST=0.9988;RSQ=0.8628;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234558909 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8098;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234558966 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.998;LDAF=0.3080;AVGPOST=0.9995;RSQ=0.9989;ERATE=0.0004;THETA=0.0009;AC=672;AN=2184 GT:DS:GL:BD 0.30769232 0
1 234559174 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234559182 . CCT C 1221 PASS INDEL;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0091;AVGPOST=0.9991;RSQ=0.9560;ERATE=0.0004;THETA=0.0005;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234559191 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0015;AVGPOST=0.9992;RSQ=0.8061;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234559217 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0047;AVGPOST=0.9996;RSQ=0.9730;ERATE=0.0008;THETA=0.0007;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234559397 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3096;AVGPOST=0.9981;RSQ=0.9968;ERATE=0.0004;THETA=0.0005;AC=675;AN=2184 GT:DS:GL:BD 0.30906594 0
1 234559416 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0087;AVGPOST=0.9996;RSQ=0.9803;ERATE=0.0003;THETA=0.0012;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234559420 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.905;LDAF=0.0126;AVGPOST=0.9984;RSQ=0.9496;ERATE=0.0003;THETA=0.0011;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234559448 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.881;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7497;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234559487 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0173;AVGPOST=0.9989;RSQ=0.9766;ERATE=0.0003;THETA=0.0040;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234559491 . TGAA T 12 PASS INDEL;BAVGPOST=0.993;BRSQ=0.471;LDAF=0.0123;AVGPOST=0.9828;RSQ=0.4466;ERATE=0.0026;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234559804 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3072;AVGPOST=0.9977;RSQ=0.9955;ERATE=0.0003;THETA=0.0003;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 234559941 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0040;AVGPOST=0.9994;RSQ=0.9375;ERATE=0.0004;THETA=0.0008;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234559978 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0148;AVGPOST=0.9992;RSQ=0.9804;ERATE=0.0003;THETA=0.0008;AC=33;AN=2184 GT:DS:GL:BD 0.01510989 0
1 234559990 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0053;AVGPOST=0.9994;RSQ=0.9552;ERATE=0.0003;THETA=0.0006;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234560147 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0025;AVGPOST=0.9996;RSQ=0.9470;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234560383 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.0344;AVGPOST=0.9995;RSQ=0.9943;ERATE=0.0003;THETA=0.0018;AC=75;AN=2184 GT:DS:GL:BD 0.03434066 0
1 234560428 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.923;LDAF=0.0027;AVGPOST=0.9989;RSQ=0.8365;ERATE=0.0004;THETA=0.0008;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234560527 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.978;LDAF=0.0218;AVGPOST=0.9979;RSQ=0.9549;ERATE=0.0006;THETA=0.0009;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234560619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.706;LDAF=0.0042;AVGPOST=0.9977;RSQ=0.7669;ERATE=0.0004;THETA=0.0025;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234560744 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.3080;AVGPOST=0.9961;RSQ=0.9922;ERATE=0.0003;THETA=0.0037;AC=671;AN=2184 GT:DS:GL:BD 0.30723444 0
1 234560762 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.773;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.6999;ERATE=0.0004;THETA=0.0101;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234560778 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.783;LDAF=0.0019;AVGPOST=0.9976;RSQ=0.4430;ERATE=0.0005;THETA=0.0027;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234560861 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.738;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5580;ERATE=0.0005;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234560863 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.708;LDAF=0.0065;AVGPOST=0.9956;RSQ=0.7188;ERATE=0.0003;THETA=0.0015;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234560864 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.970;LDAF=0.0093;AVGPOST=0.9979;RSQ=0.9030;ERATE=0.0008;THETA=0.0010;AC=19;AN=2184 GT:DS:GL:BD 0.00869963 0
1 234560927 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.979;BRSQ=0.962;LDAF=0.2947;AVGPOST=0.9770;RSQ=0.9616;ERATE=0.0005;THETA=0.0007;AC=646;AN=2184 GT:DS:GL:BD 0.29578754 0
1 234560940 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.973;BRSQ=0.952;LDAF=0.2787;AVGPOST=0.9766;RSQ=0.9596;ERATE=0.0006;THETA=0.0107;AC=612;AN=2184 GT:DS:GL:BD 0.28021979 0
1 234561062 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7425;ERATE=0.0003;THETA=0.0076;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234561202 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6808;ERATE=0.0003;THETA=0.0051;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234561251 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.939;LDAF=0.0041;AVGPOST=1.0000;RSQ=0.9947;ERATE=0.0003;THETA=0.0116;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234561286 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234561366 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0041;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0036;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234561393 . GATA G 176 PASS INDEL;BAVGPOST=0.997;BRSQ=0.895;LDAF=0.0158;AVGPOST=0.9948;RSQ=0.8851;ERATE=0.0003;THETA=0.0018;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234561394 . ATAATT A 2532 PASS INDEL;BAVGPOST=0.996;BRSQ=0.894;LDAF=0.0159;AVGPOST=0.9947;RSQ=0.8811;ERATE=0.0005;THETA=0.0047;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234561455 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=0.9768;ERATE=0.0003;THETA=0.0074;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234561498 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0047;AVGPOST=0.9998;RSQ=0.9812;ERATE=0.0029;THETA=0.0098;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234561517 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0086;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234561524 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0112;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234561540 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0070;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234561590 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2634;AVGPOST=0.9978;RSQ=0.9957;ERATE=0.0011;THETA=0.0068;AC=576;AN=2184 GT:DS:GL:BD 0.26373628 0
1 234561726 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0240;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234561771 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.958;LDAF=0.1009;AVGPOST=0.9893;RSQ=0.9564;ERATE=0.0110;THETA=0.0061;AC=215;AN=2184 GT:DS:GL:BD 0.09844323 0
1 234561792 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0066;AVGPOST=0.9997;RSQ=0.9772;ERATE=0.0005;THETA=0.0213;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234561798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.709;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0274;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234561895 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9986;RSQ=0.8304;ERATE=0.0003;THETA=0.0200;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234561988 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6523;ERATE=0.0003;THETA=0.0067;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234562083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.989;BRSQ=0.973;LDAF=0.1741;AVGPOST=0.9869;RSQ=0.9677;ERATE=0.0014;THETA=0.0029;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 234562102 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.986;LDAF=0.0456;AVGPOST=0.9966;RSQ=0.9703;ERATE=0.0004;THETA=0.0055;AC=97;AN=2184 GT:DS:GL:BD 0.04441392 0
1 234562223 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0129;AVGPOST=0.9978;RSQ=0.9399;ERATE=0.0003;THETA=0.0073;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234562261 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.753;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6436;ERATE=0.0004;THETA=0.0093;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234562268 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1783;AVGPOST=0.9969;RSQ=0.9911;ERATE=0.0005;THETA=0.0021;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 234562282 . AAC A 167 PASS INDEL;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6259;ERATE=0.0003;THETA=0.0015;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234562287 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1786;AVGPOST=0.9975;RSQ=0.9933;ERATE=0.0003;THETA=0.0020;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 234562305 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.870;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6947;ERATE=0.0003;THETA=0.0022;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234562391 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.995;LDAF=0.1590;AVGPOST=0.9982;RSQ=0.9938;ERATE=0.0007;THETA=0.0011;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 234562408 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.903;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6237;ERATE=0.0003;THETA=0.0031;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234562666 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.659;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8148;ERATE=0.0003;THETA=0.0025;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234562733 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.770;LDAF=0.0016;AVGPOST=0.9991;RSQ=0.7449;ERATE=0.0004;THETA=0.0011;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234562833 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.977;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0020;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234562879 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234562937 . TC T 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.4378;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234563060 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3665;AVGPOST=0.9998;RSQ=0.9996;ERATE=0.0004;THETA=0.0002;AC=802;AN=2184 GT:DS:GL:BD 0.36721611 0
1 234563095 . TC T 6 PASS INDEL;BAVGPOST=0.999;BRSQ=0.641;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6753;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234563334 . C CTAAA 166 PASS INDEL;BAVGPOST=1.000;BRSQ=0.809;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.6410;ERATE=0.0003;THETA=0.0016;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234563375 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234563460 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234563531 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234563556 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1731;AVGPOST=0.9992;RSQ=0.9978;ERATE=0.0016;THETA=0.0003;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 234563649 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234563655 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234563692 . TAATAAA T 1002 PASS INDEL;BAVGPOST=1.000;BRSQ=0.984;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234563881 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.978;LDAF=0.0043;AVGPOST=0.9996;RSQ=0.9624;ERATE=0.0003;THETA=0.0009;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234563935 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1459;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0003;THETA=0.0006;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 234564011 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1747;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234564029 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234564084 . T TA 24 PASS INDEL;BAVGPOST=0.998;BRSQ=0.765;LDAF=0.0070;AVGPOST=0.9931;RSQ=0.6066;ERATE=0.0025;THETA=0.0007;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234564092 . C CA 3165 PASS INDEL;BAVGPOST=0.976;BRSQ=0.927;LDAF=0.1885;AVGPOST=0.9435;RSQ=0.8557;ERATE=0.0133;THETA=0.0003;AC=401;AN=2184 GT:DS:GL:BD 0.18360806 0
1 234564093 . A AC 16158 PASS INDEL;BAVGPOST=0.990;BRSQ=0.968;LDAF=0.1557;AVGPOST=0.9956;RSQ=0.9870;ERATE=0.0008;THETA=0.0009;AC=338;AN=2184 GT:DS:GL:BD 0.15476191 0
1 234564095 . A AC 2553 PASS INDEL;BAVGPOST=0.992;BRSQ=0.864;LDAF=0.0219;AVGPOST=0.9963;RSQ=0.9336;ERATE=0.0003;THETA=0.0005;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234564154 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.834;LDAF=0.0030;AVGPOST=0.9994;RSQ=0.9232;ERATE=0.0003;THETA=0.0006;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234564202 . A AT 6849 PASS INDEL;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1753;AVGPOST=0.9936;RSQ=0.9838;ERATE=0.0003;THETA=0.0004;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 234564203 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1751;AVGPOST=0.9938;RSQ=0.9852;ERATE=0.0003;THETA=0.0011;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 234564204 . CG C 2706 PASS INDEL;BAVGPOST=0.992;BRSQ=0.980;LDAF=0.1745;AVGPOST=0.9920;RSQ=0.9799;ERATE=0.0004;THETA=0.0004;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 234564205 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.987;LDAF=0.1754;AVGPOST=0.9943;RSQ=0.9864;ERATE=0.0003;THETA=0.0004;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 234564208 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.720;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7571;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234564255 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1045;AVGPOST=0.9986;RSQ=0.9942;ERATE=0.0003;THETA=0.0003;AC=227;AN=2184 GT:DS:GL:BD 0.10393773 0
1 234564494 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.624;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5926;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234564535 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.952;LDAF=0.0205;AVGPOST=0.9967;RSQ=0.9304;ERATE=0.0006;THETA=0.0006;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234564539 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.4735;ERATE=0.0005;THETA=0.0007;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234564581 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0012;AVGPOST=0.9995;RSQ=0.8024;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234564708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1756;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0003;THETA=0.0004;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 234564864 rs75252384 GAA G 19017 PASS INDEL;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1747;AVGPOST=0.9989;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234564902 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234564951 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0098;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0003;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234565029 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0046;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234565042 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565115 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565176 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0005;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234565281 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565282 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565283 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565463 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0055;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234565465 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565582 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1577;AVGPOST=0.9998;RSQ=0.9993;ERATE=0.0003;THETA=0.0003;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234565680 . C CAGAG 245 PASS INDEL;BAVGPOST=1.000;BRSQ=0.938;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5212;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565681 . C CA 80 PASS INDEL;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6586;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565787 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1746;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234565813 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.995;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565854 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565877 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=0.9844;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234565945 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234565955 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234566085 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1746;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0002;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234566160 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234566195 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1746;AVGPOST=0.9999;RSQ=0.9997;ERATE=0.0003;THETA=0.0005;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234566238 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9414;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234566267 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0221;AVGPOST=0.9998;RSQ=0.9951;ERATE=0.0003;THETA=0.0001;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234566329 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0174;AVGPOST=0.9989;RSQ=0.9813;ERATE=0.0003;THETA=0.0001;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234566467 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1760;AVGPOST=0.9983;RSQ=0.9947;ERATE=0.0004;THETA=0.0002;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 234566487 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7311;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234566602 . GCTA G 138 PASS INDEL;BAVGPOST=1.000;BRSQ=0.878;LDAF=0.0011;AVGPOST=0.9990;RSQ=0.6308;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234566618 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234566621 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7290;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234566630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1577;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0004;THETA=0.0004;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234566681 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1746;AVGPOST=0.9997;RSQ=0.9991;ERATE=0.0003;THETA=0.0005;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234566693 . G GA 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.909;LDAF=0.0012;AVGPOST=0.9989;RSQ=0.6607;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234566700 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0009;AVGPOST=0.9999;RSQ=0.9304;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234566784 . T TA 157 PASS INDEL;BAVGPOST=0.999;BRSQ=0.634;LDAF=0.0015;AVGPOST=0.9976;RSQ=0.4381;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234566841 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0169;AVGPOST=0.9996;RSQ=0.9896;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234566892 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.980;LDAF=0.0169;AVGPOST=0.9996;RSQ=0.9902;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234566943 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1747;AVGPOST=0.9986;RSQ=0.9960;ERATE=0.0006;THETA=0.0003;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 234566996 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.947;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234567301 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1747;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0005;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234567332 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.866;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6236;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234567468 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0106;AVGPOST=0.9997;RSQ=0.9883;ERATE=0.0003;THETA=0.0006;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234567581 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1747;AVGPOST=0.9997;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234567703 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0121;AVGPOST=0.9986;RSQ=0.9578;ERATE=0.0004;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234567712 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9916;ERATE=0.0003;THETA=0.0008;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234567736 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.918;LDAF=0.0052;AVGPOST=0.9982;RSQ=0.8413;ERATE=0.0004;THETA=0.0007;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234567776 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.974;BRSQ=0.954;LDAF=0.4578;AVGPOST=0.9710;RSQ=0.9557;ERATE=0.0049;THETA=0.0004;AC=1014;AN=2184 GT:DS:GL:BD 0.46428570 0
1 234567798 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2620;AVGPOST=0.9953;RSQ=0.9892;ERATE=0.0010;THETA=0.0003;AC=574;AN=2184 GT:DS:GL:BD 0.26282051 0
1 234567911 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1750;AVGPOST=0.9991;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234567915 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0173;AVGPOST=0.9993;RSQ=0.9800;ERATE=0.0003;THETA=0.0007;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234567916 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0068;AVGPOST=0.9992;RSQ=0.9514;ERATE=0.0003;THETA=0.0005;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234568024 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.989;LDAF=0.1579;AVGPOST=0.9980;RSQ=0.9930;ERATE=0.0006;THETA=0.0006;AC=345;AN=2184 GT:DS:GL:BD 0.15796703 0
1 234568045 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.457;LDAF=0.0021;AVGPOST=0.9968;RSQ=0.3417;ERATE=0.0007;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234568060 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.565;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4423;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234568070 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.847;LDAF=0.0018;AVGPOST=0.9979;RSQ=0.5998;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234568101 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.969;LDAF=0.1761;AVGPOST=0.9956;RSQ=0.9882;ERATE=0.0003;THETA=0.0002;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 234568114 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.990;BRSQ=0.970;LDAF=0.1723;AVGPOST=0.9953;RSQ=0.9868;ERATE=0.0005;THETA=0.0004;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 234568116 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.758;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5854;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234568145 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.772;LDAF=0.0031;AVGPOST=0.9987;RSQ=0.8072;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234568189 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0053;AVGPOST=0.9995;RSQ=0.9663;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234568189 . AAT A 50235 PASS INDEL;BAVGPOST=0.993;BRSQ=0.524;LDAF=0.9861;AVGPOST=0.9805;RSQ=0.4484;ERATE=0.0040;THETA=0.0004;AC=2167;AN=2184 GT:DS:GL:BD 0.99221611 1
1 234568202 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8656;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234568258 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234568264 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1750;AVGPOST=0.9991;RSQ=0.9975;ERATE=0.0003;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234568451 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.1458;AVGPOST=0.9988;RSQ=0.9964;ERATE=0.0003;THETA=0.0004;AC=319;AN=2184 GT:DS:GL:BD 0.14606227 0
1 234568480 . C CT 17758 PASS INDEL;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1583;AVGPOST=0.9984;RSQ=0.9950;ERATE=0.0005;THETA=0.0005;AC=346;AN=2184 GT:DS:GL:BD 0.15842491 0
1 234568505 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0024;AVGPOST=0.9998;RSQ=0.9545;ERATE=0.0003;THETA=0.0007;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234568510 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.963;LDAF=0.0048;AVGPOST=0.9992;RSQ=0.9238;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234568592 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9999;RSQ=0.9881;ERATE=0.0003;THETA=0.0008;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234568613 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1188;AVGPOST=0.9996;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=259;AN=2184 GT:DS:GL:BD 0.11858974 0
1 234568665 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6853;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234568684 . A AT 10345 PASS INDEL;BAVGPOST=0.994;BRSQ=0.979;LDAF=0.1750;AVGPOST=0.9968;RSQ=0.9908;ERATE=0.0005;THETA=0.0004;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 234568685 rs111358582 T TC 25125 PASS INDEL;BAVGPOST=0.992;BRSQ=0.976;LDAF=0.1742;AVGPOST=0.9977;RSQ=0.9932;ERATE=0.0005;THETA=0.0007;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 234568788 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9149;ERATE=0.0004;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234568919 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0071;AVGPOST=0.9990;RSQ=0.9398;ERATE=0.0005;THETA=0.0004;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234568961 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234569013 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0051;AVGPOST=0.9999;RSQ=0.9914;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234569015 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234569032 rs112979975 A AC 25589 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1767;AVGPOST=0.9978;RSQ=0.9940;ERATE=0.0004;THETA=0.0004;AC=386;AN=2184 GT:DS:GL:BD 0.17673993 0
1 234569042 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234569082 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234569113 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0005;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234569155 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0000;AVGPOST=1.0000;RSQ=0.0000;ERATE=0.0003;THETA=0.0005;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234569192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1746;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234569640 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234569770 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.922;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8940;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234569772 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1747;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0005;THETA=0.0002;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234569791 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.974;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6407;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234569837 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.979;LDAF=0.0175;AVGPOST=0.9991;RSQ=0.9797;ERATE=0.0003;THETA=0.0003;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234569983 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.982;LDAF=0.0064;AVGPOST=0.9988;RSQ=0.9261;ERATE=0.0003;THETA=0.0004;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234569988 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.893;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8962;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234570083 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9998;RSQ=0.9931;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234570158 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234570447 MERGED_DEL_2_7754 GTCCCTGGCAGAACTGAAGCTGGGGATGTAGATGAGATCATCAAGTGACAGGGGAGAGAATGAGAAAAGAAGGGGTCAGGGACAAGCTTTAAAGAGCTCTGGCTTCAAAGGTTAGGGAGCAGAGAATGGACATTCAAAGAAGAAATGGAAATAATGGCCAGAAAGATGCAGGGGCTGGGGCAGGAGAAGC G . . SV;BAVGPOST=0.995;BRSQ=0.526;LDAF=0.0058;AVGPOST=0.9924;RSQ=0.4526;ERATE=0.0024;THETA=0.0004;CIEND=-75,78;CIPOS=-85,72;END=234571872;HOMLEN=2;HOMSEQ=TC;SOURCE=BreakDancer_234570434_234571865 GT:DS:GL:BD 0.00228938 0
1 234570519 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.944;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6525;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234570652 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0004;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234570675 . AG A 78 PASS INDEL;BAVGPOST=1.000;BRSQ=0.926;LDAF=0.0013;AVGPOST=0.9983;RSQ=0.4961;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234570685 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.1083;AVGPOST=0.9992;RSQ=0.9966;ERATE=0.0004;THETA=0.0003;AC=236;AN=2184 GT:DS:GL:BD 0.10805861 0
1 234570698 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0165;AVGPOST=1.0000;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234570733 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.879;LDAF=0.0018;AVGPOST=0.9991;RSQ=0.8139;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234570764 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9998;RSQ=0.9915;ERATE=0.0003;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234570889 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1742;AVGPOST=0.9982;RSQ=0.9942;ERATE=0.0008;THETA=0.0003;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234571060 . T TAAAAATAC 14677 PASS INDEL;BAVGPOST=0.961;BRSQ=0.852;LDAF=0.1552;AVGPOST=0.9860;RSQ=0.9561;ERATE=0.0014;THETA=0.0002;AC=343;AN=2184 GT:DS:GL:BD 0.15705128 0
1 234571099 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.724;LDAF=0.0029;AVGPOST=0.9974;RSQ=0.6424;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234571123 rs112010867 C CGG 8023 PASS INDEL;BAVGPOST=0.963;BRSQ=0.858;LDAF=0.1489;AVGPOST=0.9761;RSQ=0.9304;ERATE=0.0014;THETA=0.0005;AC=327;AN=2184 GT:DS:GL:BD 0.14972527 0
1 234571137 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.977;BRSQ=0.905;LDAF=0.1331;AVGPOST=0.9790;RSQ=0.9361;ERATE=0.0005;THETA=0.0002;AC=296;AN=2184 GT:DS:GL:BD 0.13553114 0
1 234571141 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.976;BRSQ=0.896;LDAF=0.1233;AVGPOST=0.9808;RSQ=0.9364;ERATE=0.0004;THETA=0.0004;AC=273;AN=2184 GT:DS:GL:BD 0.12500000 0
1 234571245 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.817;LDAF=0.0021;AVGPOST=0.9994;RSQ=0.8688;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234571300 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.991;LDAF=0.2518;AVGPOST=0.9969;RSQ=0.9940;ERATE=0.0005;THETA=0.0001;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 234571301 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.754;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7428;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234571363 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0120;AVGPOST=0.9995;RSQ=0.9814;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234571431 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1596;AVGPOST=0.9989;RSQ=0.9963;ERATE=0.0003;THETA=0.0003;AC=349;AN=2184 GT:DS:GL:BD 0.15979853 0
1 234571486 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.966;LDAF=0.0312;AVGPOST=0.9983;RSQ=0.9748;ERATE=0.0003;THETA=0.0003;AC=68;AN=2184 GT:DS:GL:BD 0.03113553 0
1 234571520 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.1749;AVGPOST=0.9990;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234571528 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.960;LDAF=0.0014;AVGPOST=0.9990;RSQ=0.7380;ERATE=0.0003;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234571554 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1746;AVGPOST=0.9998;RSQ=0.9992;ERATE=0.0003;THETA=0.0011;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234571608 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1742;AVGPOST=0.9987;RSQ=0.9956;ERATE=0.0005;THETA=0.0002;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 234571619 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.992;LDAF=0.3665;AVGPOST=0.9969;RSQ=0.9949;ERATE=0.0005;THETA=0.0005;AC=803;AN=2184 GT:DS:GL:BD 0.36767399 0
1 234571627 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234571667 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0011;AVGPOST=0.9991;RSQ=0.6472;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234571688 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1743;AVGPOST=0.9996;RSQ=0.9986;ERATE=0.0003;THETA=0.0002;AC=381;AN=2184 GT:DS:GL:BD 0.17445055 0
1 234571738 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.916;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7475;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234571805 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.893;LDAF=0.0294;AVGPOST=0.9918;RSQ=0.9093;ERATE=0.0003;THETA=0.0007;AC=61;AN=2184 GT:DS:GL:BD 0.02793040 0
1 234571854 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1747;AVGPOST=0.9984;RSQ=0.9954;ERATE=0.0004;THETA=0.0002;AC=382;AN=2184 GT:DS:GL:BD 0.17490843 0
1 234571865 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.826;LDAF=0.0040;AVGPOST=0.9975;RSQ=0.7497;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234571886 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1748;AVGPOST=0.9964;RSQ=0.9905;ERATE=0.0004;THETA=0.0004;AC=385;AN=2184 GT:DS:GL:BD 0.17628205 0
1 234571888 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.988;LDAF=0.1733;AVGPOST=0.9977;RSQ=0.9941;ERATE=0.0003;THETA=0.0002;AC=380;AN=2184 GT:DS:GL:BD 0.17399268 0
1 234571928 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.994;LDAF=0.1737;AVGPOST=0.9984;RSQ=0.9949;ERATE=0.0007;THETA=0.0001;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 234571953 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1729;AVGPOST=0.9964;RSQ=0.9894;ERATE=0.0008;THETA=0.0002;AC=379;AN=2184 GT:DS:GL:BD 0.17353480 0
1 234571954 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.729;LDAF=0.0024;AVGPOST=0.9983;RSQ=0.7056;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234571971 . CT C 83 PASS INDEL;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0028;AVGPOST=0.9970;RSQ=0.5315;ERATE=0.0007;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234571990 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.962;LDAF=0.0418;AVGPOST=0.9973;RSQ=0.9745;ERATE=0.0004;THETA=0.0002;AC=91;AN=2184 GT:DS:GL:BD 0.04166667 0
1 234572086 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0168;AVGPOST=0.9993;RSQ=0.9800;ERATE=0.0005;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234572090 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1224;AVGPOST=0.9952;RSQ=0.9843;ERATE=0.0005;THETA=0.0004;AC=265;AN=2184 GT:DS:GL:BD 0.12133700 0
1 234572268 . TA T 1410 PASS INDEL;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0178;AVGPOST=0.9984;RSQ=0.9619;ERATE=0.0005;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234572385 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.638;LDAF=0.0044;AVGPOST=0.9969;RSQ=0.7121;ERATE=0.0006;THETA=0.0006;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234572440 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.894;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5682;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234572459 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0032;AVGPOST=0.9995;RSQ=0.9346;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234572516 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.654;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7073;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234572637 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.1657;AVGPOST=0.9984;RSQ=0.9953;ERATE=0.0003;THETA=0.0005;AC=362;AN=2184 GT:DS:GL:BD 0.16575092 0
1 234572706 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0165;AVGPOST=0.9998;RSQ=0.9946;ERATE=0.0003;THETA=0.0003;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234572788 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.888;LDAF=0.0027;AVGPOST=0.9993;RSQ=0.9016;ERATE=0.0007;THETA=0.0003;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234572848 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9998;RSQ=0.9452;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234572881 . G GT 71 PASS INDEL;BAVGPOST=0.995;BRSQ=0.626;LDAF=0.0107;AVGPOST=0.9856;RSQ=0.4711;ERATE=0.0019;THETA=0.0014;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234572968 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.803;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234573025 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0614;AVGPOST=0.9994;RSQ=0.9966;ERATE=0.0003;THETA=0.0002;AC=135;AN=2184 GT:DS:GL:BD 0.06181319 0
1 234573171 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1587;AVGPOST=0.9996;RSQ=0.9988;ERATE=0.0005;THETA=0.0004;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 234573174 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234573188 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234573194 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0018;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234573265 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.986;LDAF=0.0176;AVGPOST=0.9995;RSQ=0.9887;ERATE=0.0003;THETA=0.0002;AC=38;AN=2184 GT:DS:GL:BD 0.01739927 0
1 234573357 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.4593;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0005;THETA=0.0004;AC=1004;AN=2184 GT:DS:GL:BD 0.45970696 0
1 234573478 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0169;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234573550 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1456;AVGPOST=0.9983;RSQ=0.9945;ERATE=0.0005;THETA=0.0003;AC=318;AN=2184 GT:DS:GL:BD 0.14560440 0
1 234573607 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0040;AVGPOST=0.9992;RSQ=0.9243;ERATE=0.0004;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234573615 . A AG 10 PASS INDEL;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9992;RSQ=0.6368;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234573689 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0029;AVGPOST=0.9979;RSQ=0.7587;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234573744 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7664;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234573826 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0074;AVGPOST=0.9990;RSQ=0.9414;ERATE=0.0004;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234573884 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.983;LDAF=0.0053;AVGPOST=0.9989;RSQ=0.9188;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234573893 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0135;AVGPOST=0.9993;RSQ=0.9773;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234573906 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.851;LDAF=0.0016;AVGPOST=0.9987;RSQ=0.6663;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234573941 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.1755;AVGPOST=0.9990;RSQ=0.9970;ERATE=0.0003;THETA=0.0004;AC=384;AN=2184 GT:DS:GL:BD 0.17582418 0
1 234573962 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0106;AVGPOST=0.9999;RSQ=0.9958;ERATE=0.0003;THETA=0.0003;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234573967 . AT A 228 PASS INDEL;BAVGPOST=1.000;BRSQ=0.868;LDAF=0.0014;AVGPOST=0.9989;RSQ=0.6540;ERATE=0.0006;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234574038 rs111619785 G GA 12042 PASS INDEL;BAVGPOST=0.990;BRSQ=0.971;LDAF=0.1794;AVGPOST=0.9893;RSQ=0.9714;ERATE=0.0014;THETA=0.0003;AC=389;AN=2184 GT:DS:GL:BD 0.17811355 0
1 234574061 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0047;AVGPOST=0.9997;RSQ=0.9685;ERATE=0.0003;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234574105 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.902;LDAF=0.0069;AVGPOST=0.9997;RSQ=0.9784;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234574127 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.915;LDAF=0.0036;AVGPOST=0.9988;RSQ=0.8679;ERATE=0.0004;THETA=0.0004;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234574201 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.6005;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234574232 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0054;AVGPOST=0.9993;RSQ=0.9393;ERATE=0.0003;THETA=0.0001;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234574340 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.945;LDAF=0.0050;AVGPOST=0.9982;RSQ=0.8577;ERATE=0.0003;THETA=0.0001;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234574387 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.976;LDAF=0.0407;AVGPOST=0.9978;RSQ=0.9780;ERATE=0.0003;THETA=0.0001;AC=88;AN=2184 GT:DS:GL:BD 0.04029304 0
1 234574393 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.850;LDAF=0.0008;AVGPOST=0.9995;RSQ=0.7691;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234574482 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234574519 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0080;AVGPOST=0.9994;RSQ=0.9625;ERATE=0.0003;THETA=0.0003;AC=17;AN=2184 GT:DS:GL:BD 0.00778388 0
1 234574540 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0013;AVGPOST=0.9993;RSQ=0.7368;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234574541 . G GA 7 PASS INDEL;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0025;AVGPOST=0.9968;RSQ=0.5011;ERATE=0.0008;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234574589 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.919;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.6003;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234574682 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.821;LDAF=0.0043;AVGPOST=0.9989;RSQ=0.8772;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234574716 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2843;AVGPOST=0.9991;RSQ=0.9978;ERATE=0.0003;THETA=0.0002;AC=621;AN=2184 GT:DS:GL:BD 0.28434065 0
1 234574911 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.993;LDAF=0.0157;AVGPOST=0.9990;RSQ=0.9719;ERATE=0.0003;THETA=0.0003;AC=34;AN=2184 GT:DS:GL:BD 0.01556777 0
1 234574937 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.1749;AVGPOST=0.9990;RSQ=0.9968;ERATE=0.0004;THETA=0.0001;AC=383;AN=2184 GT:DS:GL:BD 0.17536630 0
1 234574992 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.2506;AVGPOST=0.9962;RSQ=0.9921;ERATE=0.0012;THETA=0.0004;AC=548;AN=2184 GT:DS:GL:BD 0.25091577 0
1 234575001 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.975;LDAF=0.0107;AVGPOST=0.9977;RSQ=0.9224;ERATE=0.0004;THETA=0.0003;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234575119 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0020;AVGPOST=0.9989;RSQ=0.7761;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234575198 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5917;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234575292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0043;AVGPOST=0.9995;RSQ=0.9506;ERATE=0.0003;THETA=0.0004;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234575322 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0011;AVGPOST=0.9996;RSQ=0.8413;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234575324 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.884;LDAF=0.0028;AVGPOST=0.9986;RSQ=0.7868;ERATE=0.0004;THETA=0.0001;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234575398 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9896;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234575449 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.853;LDAF=0.0038;AVGPOST=0.9980;RSQ=0.8012;ERATE=0.0004;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234575464 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.985;LDAF=0.0122;AVGPOST=0.9983;RSQ=0.9434;ERATE=0.0004;THETA=0.0003;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234575497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.612;LDAF=0.0024;AVGPOST=0.9979;RSQ=0.6367;ERATE=0.0006;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234575604 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1461;AVGPOST=0.9982;RSQ=0.9944;ERATE=0.0004;THETA=0.0006;AC=320;AN=2184 GT:DS:GL:BD 0.14652015 0
1 234575633 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0125;AVGPOST=0.9988;RSQ=0.9679;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234575716 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.884;LDAF=0.0233;AVGPOST=0.9937;RSQ=0.8970;ERATE=0.0003;THETA=0.0002;AC=47;AN=2184 GT:DS:GL:BD 0.02152015 0
1 234575723 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.694;LDAF=0.0012;AVGPOST=0.9985;RSQ=0.5773;ERATE=0.0004;THETA=0.0005;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234575823 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.911;LDAF=0.0045;AVGPOST=0.9977;RSQ=0.8135;ERATE=0.0003;THETA=0.0007;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234576123 . T TA 90 PASS INDEL;BAVGPOST=0.986;BRSQ=0.560;LDAF=0.0271;AVGPOST=0.9648;RSQ=0.4713;ERATE=0.0086;THETA=0.0005;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234576206 . A AC 165 PASS INDEL;BAVGPOST=0.998;BRSQ=0.936;LDAF=0.0155;AVGPOST=0.9986;RSQ=0.9639;ERATE=0.0003;THETA=0.0002;AC=35;AN=2184 GT:DS:GL:BD 0.01602564 0
1 234576207 rs113058179 C CA 2482 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0169;AVGPOST=0.9996;RSQ=0.9882;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234576208 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.937;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8316;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234576265 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.991;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234576326 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.872;LDAF=0.0017;AVGPOST=0.9984;RSQ=0.6220;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234576401 . AAACC A 350 PASS INDEL;BAVGPOST=0.988;BRSQ=0.612;LDAF=0.0131;AVGPOST=0.9843;RSQ=0.5459;ERATE=0.0024;THETA=0.0003;AC=20;AN=2184 GT:DS:GL:BD 0.00915751 0
1 234576405 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.993;LDAF=0.1732;AVGPOST=0.9988;RSQ=0.9972;ERATE=0.0003;THETA=0.0003;AC=378;AN=2184 GT:DS:GL:BD 0.17307693 0
1 234576509 rs113704985 A AT 2593 PASS INDEL;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0184;AVGPOST=0.9968;RSQ=0.9328;ERATE=0.0005;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234576558 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0175;AVGPOST=0.9981;RSQ=0.9521;ERATE=0.0005;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234576573 . TGTGTAA T 3848 PASS INDEL;BAVGPOST=0.998;BRSQ=0.962;LDAF=0.0169;AVGPOST=0.9995;RSQ=0.9873;ERATE=0.0003;THETA=0.0011;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234576586 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.965;LDAF=0.0106;AVGPOST=0.9990;RSQ=0.9638;ERATE=0.0004;THETA=0.0002;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234576588 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7074;ERATE=0.0007;THETA=0.0011;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234576610 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.933;LDAF=0.0054;AVGPOST=0.9992;RSQ=0.9371;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234576631 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7651;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234576632 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7905;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234576708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.890;LDAF=0.0029;AVGPOST=0.9995;RSQ=0.9418;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234576921 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0009;AVGPOST=0.9997;RSQ=0.8448;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234576934 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7337;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234576963 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.763;LDAF=0.0019;AVGPOST=0.9991;RSQ=0.8459;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234577129 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0171;AVGPOST=0.9994;RSQ=0.9833;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234577178 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234577197 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234577407 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1781;AVGPOST=0.9989;RSQ=0.9965;ERATE=0.0003;THETA=0.0003;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 234577458 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.757;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.7455;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234577509 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.929;LDAF=0.0014;AVGPOST=0.9994;RSQ=0.8188;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234577514 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1091;AVGPOST=0.9991;RSQ=0.9963;ERATE=0.0003;THETA=0.0005;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 234577554 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.6829;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234577573 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.793;LDAF=0.0023;AVGPOST=0.9990;RSQ=0.8205;ERATE=0.0004;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234577589 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6141;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234577707 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.789;LDAF=0.0018;AVGPOST=0.9984;RSQ=0.6153;ERATE=0.0006;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234577751 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5938;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234577799 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.640;LDAF=0.0021;AVGPOST=0.9979;RSQ=0.6172;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234577809 rs71576422 CA C 22959 PASS INDEL;BAVGPOST=0.993;BRSQ=0.988;LDAF=0.3875;AVGPOST=0.9824;RSQ=0.9723;ERATE=0.0048;THETA=0.0003;AC=841;AN=2184 GT:DS:GL:BD 0.38507327 0
1 234577912 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.829;LDAF=0.0012;AVGPOST=0.9994;RSQ=0.8080;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234577913 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.944;LDAF=0.0473;AVGPOST=0.9939;RSQ=0.9507;ERATE=0.0003;THETA=0.0014;AC=101;AN=2184 GT:DS:GL:BD 0.04624542 0
1 234577925 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0011;AVGPOST=0.9997;RSQ=0.8780;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234578083 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.948;LDAF=0.0072;AVGPOST=0.9984;RSQ=0.9057;ERATE=0.0006;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234578102 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0111;AVGPOST=0.9993;RSQ=0.9701;ERATE=0.0003;THETA=0.0002;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234578226 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2468;AVGPOST=0.9980;RSQ=0.9954;ERATE=0.0006;THETA=0.0003;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 234578242 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.787;LDAF=0.0010;AVGPOST=0.9997;RSQ=0.8725;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234578289 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.837;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8176;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234578370 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.968;LDAF=0.0115;AVGPOST=0.9989;RSQ=0.9569;ERATE=0.0004;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234578537 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.973;LDAF=0.0024;AVGPOST=0.9997;RSQ=0.9488;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234578577 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5665;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0004;THETA=0.0004;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 234578647 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2397;AVGPOST=0.9982;RSQ=0.9961;ERATE=0.0003;THETA=0.0003;AC=524;AN=2184 GT:DS:GL:BD 0.23992674 0
1 234578670 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.991;BRSQ=0.399;LDAF=0.0124;AVGPOST=0.9828;RSQ=0.4763;ERATE=0.0058;THETA=0.0003;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234578758 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5639;AVGPOST=0.9964;RSQ=0.9942;ERATE=0.0007;THETA=0.0003;AC=1235;AN=2184 GT:DS:GL:BD 0.56547618 1
1 234579091 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3205;AVGPOST=0.9977;RSQ=0.9954;ERATE=0.0006;THETA=0.0001;AC=700;AN=2184 GT:DS:GL:BD 0.32051283 0
1 234579135 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0015;AVGPOST=0.9997;RSQ=0.9134;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234579220 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0029;AVGPOST=0.9996;RSQ=0.9393;ERATE=0.0003;THETA=0.0002;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234579236 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234579307 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.807;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5926;ERATE=0.0004;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234579368 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3034;AVGPOST=0.9994;RSQ=0.9986;ERATE=0.0004;THETA=0.0005;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234579381 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.878;LDAF=0.0021;AVGPOST=0.9992;RSQ=0.8637;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234579598 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.979;LDAF=0.0069;AVGPOST=0.9999;RSQ=0.9905;ERATE=0.0003;THETA=0.0003;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234579644 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0005;AVGPOST=0.9997;RSQ=0.7622;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234579722 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6526;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234579748 . G GT 17 PASS INDEL;BAVGPOST=1.000;BRSQ=0.924;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6724;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234579866 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2593;AVGPOST=0.9988;RSQ=0.9974;ERATE=0.0004;THETA=0.0003;AC=567;AN=2184 GT:DS:GL:BD 0.25961539 0
1 234579883 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.988;LDAF=0.3031;AVGPOST=0.9985;RSQ=0.9967;ERATE=0.0005;THETA=0.0002;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234579973 rs67745037 A AAAG 38249 PASS INDEL;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3014;AVGPOST=0.9912;RSQ=0.9839;ERATE=0.0010;THETA=0.0006;AC=662;AN=2184 GT:DS:GL:BD 0.30311355 0
1 234580011 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0046;AVGPOST=0.9995;RSQ=0.9505;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234580018 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.934;LDAF=0.0026;AVGPOST=0.9993;RSQ=0.8798;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234580029 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0169;AVGPOST=1.0000;RSQ=0.9987;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234580031 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3035;AVGPOST=0.9995;RSQ=0.9988;ERATE=0.0003;THETA=0.0003;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234580033 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234580052 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2593;AVGPOST=0.9987;RSQ=0.9976;ERATE=0.0004;THETA=0.0002;AC=568;AN=2184 GT:DS:GL:BD 0.26007327 0
1 234580210 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234580222 . TG T 537 PASS INDEL;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0056;AVGPOST=0.9988;RSQ=0.9023;ERATE=0.0004;THETA=0.0001;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234580271 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.5665;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 234580292 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.912;LDAF=0.0007;AVGPOST=0.9994;RSQ=0.6043;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234580305 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.976;LDAF=0.0140;AVGPOST=0.9987;RSQ=0.9590;ERATE=0.0003;THETA=0.0001;AC=30;AN=2184 GT:DS:GL:BD 0.01373626 0
1 234580333 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.965;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.6007;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234580360 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.6611;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234580511 . CCTCT C 66 PASS INDEL;BAVGPOST=1.000;BRSQ=0.886;LDAF=0.0013;AVGPOST=0.9992;RSQ=0.7318;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234580708 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234580723 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.972;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234580789 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2513;AVGPOST=0.9987;RSQ=0.9977;ERATE=0.0003;THETA=0.0003;AC=549;AN=2184 GT:DS:GL:BD 0.25137362 0
1 234580791 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.952;LDAF=0.0098;AVGPOST=0.9984;RSQ=0.9333;ERATE=0.0003;THETA=0.0004;AC=21;AN=2184 GT:DS:GL:BD 0.00961538 0
1 234580832 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.7529;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234580835 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.925;LDAF=0.0027;AVGPOST=0.9984;RSQ=0.8108;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234580918 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.988;BRSQ=0.569;LDAF=0.0180;AVGPOST=0.9793;RSQ=0.5541;ERATE=0.0080;THETA=0.0005;AC=25;AN=2184 GT:DS:GL:BD 0.01144689 0
1 234580927 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3045;AVGPOST=0.9990;RSQ=0.9979;ERATE=0.0004;THETA=0.0004;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 234580934 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0025;AVGPOST=0.9983;RSQ=0.7246;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234580945 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1094;AVGPOST=0.9995;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 234580978 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0110;AVGPOST=0.9999;RSQ=0.9960;ERATE=0.0003;THETA=0.0003;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234581084 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3038;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234581095 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3034;AVGPOST=0.9991;RSQ=0.9982;ERATE=0.0003;THETA=0.0002;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234581103 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234581127 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0021;AVGPOST=0.9991;RSQ=0.8112;ERATE=0.0005;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234581185 rs71576423 GTCT G 29875 PASS INDEL;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.3028;AVGPOST=0.9970;RSQ=0.9940;ERATE=0.0004;THETA=0.0003;AC=661;AN=2184 GT:DS:GL:BD 0.30265567 0
1 234581215 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3045;AVGPOST=0.9971;RSQ=0.9945;ERATE=0.0007;THETA=0.0002;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 234581247 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0021;AVGPOST=0.9981;RSQ=0.6645;ERATE=0.0004;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234581328 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0020;AVGPOST=0.9995;RSQ=0.8829;ERATE=0.0003;THETA=0.0005;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234581363 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0010;AVGPOST=0.9992;RSQ=0.6796;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234581371 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3040;AVGPOST=0.9984;RSQ=0.9969;ERATE=0.0005;THETA=0.0004;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234581401 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9135;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234581403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3038;AVGPOST=0.9992;RSQ=0.9981;ERATE=0.0004;THETA=0.0004;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234581406 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.868;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8757;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234581436 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0172;AVGPOST=0.9994;RSQ=0.9831;ERATE=0.0003;THETA=0.0004;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234581497 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.622;LDAF=0.0011;AVGPOST=0.9988;RSQ=0.5011;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234581633 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.984;BRSQ=0.964;LDAF=0.3026;AVGPOST=0.9958;RSQ=0.9906;ERATE=0.0015;THETA=0.0003;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234581695 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3063;AVGPOST=0.9959;RSQ=0.9919;ERATE=0.0009;THETA=0.0003;AC=670;AN=2184 GT:DS:GL:BD 0.30677655 0
1 234581787 rs3835693 TA T 24 PASS INDEL;BAVGPOST=0.999;BRSQ=0.715;LDAF=0.0031;AVGPOST=0.9961;RSQ=0.5277;ERATE=0.0008;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234581793 . A AACAGG 35128 PASS INDEL;BAVGPOST=0.994;BRSQ=0.985;LDAF=0.3035;AVGPOST=0.9849;RSQ=0.9713;ERATE=0.0022;THETA=0.0005;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 234581891 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3041;AVGPOST=0.9955;RSQ=0.9906;ERATE=0.0024;THETA=0.0003;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 234581920 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.989;LDAF=0.0186;AVGPOST=0.9993;RSQ=0.9856;ERATE=0.0003;THETA=0.0002;AC=40;AN=2184 GT:DS:GL:BD 0.01831502 0
1 234581957 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3048;AVGPOST=0.9980;RSQ=0.9959;ERATE=0.0005;THETA=0.0005;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 234582088 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.602;LDAF=0.0013;AVGPOST=0.9980;RSQ=0.3601;ERATE=0.0005;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234582181 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3039;AVGPOST=0.9915;RSQ=0.9840;ERATE=0.0018;THETA=0.0002;AC=664;AN=2184 GT:DS:GL:BD 0.30402932 0
1 234582220 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.766;LDAF=0.0014;AVGPOST=0.9980;RSQ=0.5805;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234582230 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.987;LDAF=0.3033;AVGPOST=0.9977;RSQ=0.9949;ERATE=0.0009;THETA=0.0004;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234582253 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5535;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234582273 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0255;AVGPOST=0.9991;RSQ=0.9836;ERATE=0.0004;THETA=0.0002;AC=56;AN=2184 GT:DS:GL:BD 0.02564103 0
1 234582281 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.992;LDAF=0.3032;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0004;THETA=0.0008;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234582307 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.910;LDAF=0.0009;AVGPOST=0.9994;RSQ=0.7367;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234582457 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.997;LDAF=0.5662;AVGPOST=0.9988;RSQ=0.9980;ERATE=0.0003;THETA=0.0003;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 234582461 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2990;AVGPOST=0.9993;RSQ=0.9986;ERATE=0.0003;THETA=0.0004;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234582474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234582628 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0005;AVGPOST=1.0000;RSQ=0.9547;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234582651 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3103;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 234582669 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234582688 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234582692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234582720 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0165;AVGPOST=0.9999;RSQ=0.9974;ERATE=0.0003;THETA=0.0002;AC=36;AN=2184 GT:DS:GL:BD 0.01648352 0
1 234582767 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.992;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234582897 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3104;AVGPOST=0.9996;RSQ=0.9991;ERATE=0.0003;THETA=0.0001;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 234583167 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.980;BRSQ=0.923;LDAF=0.1583;AVGPOST=0.9957;RSQ=0.9857;ERATE=0.0004;THETA=0.0002;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 234583179 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.689;LDAF=0.0024;AVGPOST=0.9974;RSQ=0.5563;ERATE=0.0008;THETA=0.0001;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234583243 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.764;LDAF=0.0021;AVGPOST=0.9977;RSQ=0.5772;ERATE=0.0005;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234583274 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.987;BRSQ=0.954;LDAF=0.1585;AVGPOST=0.9953;RSQ=0.9874;ERATE=0.0004;THETA=0.0002;AC=347;AN=2184 GT:DS:GL:BD 0.15888278 0
1 234583287 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.817;LDAF=0.0011;AVGPOST=0.9984;RSQ=0.3565;ERATE=0.0006;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234583300 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.3111;AVGPOST=0.9977;RSQ=0.9949;ERATE=0.0006;THETA=0.0001;AC=680;AN=2184 GT:DS:GL:BD 0.31135532 0
1 234583367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.863;LDAF=0.0016;AVGPOST=0.9975;RSQ=0.3583;ERATE=0.0004;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234583556 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.906;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5882;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234583618 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2993;AVGPOST=0.9987;RSQ=0.9971;ERATE=0.0004;THETA=0.0002;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234583720 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.985;LDAF=0.1782;AVGPOST=0.9984;RSQ=0.9951;ERATE=0.0004;THETA=0.0002;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 234583857 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.776;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5598;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234583908 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.843;LDAF=0.0010;AVGPOST=0.9989;RSQ=0.5112;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234584016 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8760;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234584066 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234584176 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234584202 rs111368937 CT C 594 PASS INDEL;BAVGPOST=0.999;BRSQ=0.855;LDAF=0.0046;AVGPOST=0.9990;RSQ=0.9026;ERATE=0.0005;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234584231 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.2968;AVGPOST=0.9995;RSQ=0.9994;ERATE=0.0003;THETA=0.0003;AC=648;AN=2184 GT:DS:GL:BD 0.29670331 0
1 234584266 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234584288 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0169;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0001;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234584430 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234584445 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.2993;AVGPOST=1.0000;RSQ=0.9999;ERATE=0.0003;THETA=0.0004;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234584446 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2393;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0004;THETA=0.0001;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 234584474 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0013;AVGPOST=0.9996;RSQ=0.8790;ERATE=0.0004;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234584531 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0030;AVGPOST=0.9992;RSQ=0.8971;ERATE=0.0003;THETA=0.0003;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234584569 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5664;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0004;THETA=0.0002;AC=1238;AN=2184 GT:DS:GL:BD 0.56684983 1
1 234584630 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0069;AVGPOST=1.0000;RSQ=0.9968;ERATE=0.0003;THETA=0.0002;AC=15;AN=2184 GT:DS:GL:BD 0.00686813 0
1 234584662 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.8401;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234584828 rs79446793 AG A 2552 PASS INDEL;BAVGPOST=0.997;BRSQ=0.933;LDAF=0.0218;AVGPOST=0.9973;RSQ=0.9489;ERATE=0.0003;THETA=0.0002;AC=46;AN=2184 GT:DS:GL:BD 0.02106227 0
1 234584850 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.946;LDAF=0.0050;AVGPOST=0.9998;RSQ=0.9795;ERATE=0.0003;THETA=0.0002;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234584926 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3106;AVGPOST=0.9992;RSQ=0.9982;ERATE=0.0004;THETA=0.0003;AC=678;AN=2184 GT:DS:GL:BD 0.31043956 0
1 234584997 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7255;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234585003 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2465;AVGPOST=0.9986;RSQ=0.9970;ERATE=0.0005;THETA=0.0001;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 234585049 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0033;AVGPOST=0.9997;RSQ=0.9614;ERATE=0.0003;THETA=0.0002;AC=7;AN=2184 GT:DS:GL:BD 0.00320513 0
1 234585192 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2462;AVGPOST=0.9993;RSQ=0.9983;ERATE=0.0004;THETA=0.0003;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 234585450 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.994;LDAF=0.0170;AVGPOST=0.9999;RSQ=0.9973;ERATE=0.0003;THETA=0.0003;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234585541 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.999;LDAF=0.3021;AVGPOST=0.9989;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 234585558 . A AG 23 PASS INDEL;BAVGPOST=1.000;BRSQ=0.936;LDAF=0.0012;AVGPOST=0.9988;RSQ=0.5292;ERATE=0.0005;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234585618 . T TA 901 PASS INDEL;BAVGPOST=0.997;BRSQ=0.860;LDAF=0.0105;AVGPOST=0.9989;RSQ=0.9579;ERATE=0.0004;THETA=0.0003;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234585737 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2990;AVGPOST=0.9972;RSQ=0.9937;ERATE=0.0011;THETA=0.0004;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234585782 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.942;LDAF=0.0022;AVGPOST=0.9990;RSQ=0.8022;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234585790 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.5667;AVGPOST=0.9995;RSQ=0.9990;ERATE=0.0003;THETA=0.0004;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 234585820 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2993;AVGPOST=0.9994;RSQ=0.9987;ERATE=0.0004;THETA=0.0002;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234585913 rs71583787 ACTT A 31467 PASS INDEL;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3003;AVGPOST=0.9967;RSQ=0.9936;ERATE=0.0006;THETA=0.0006;AC=658;AN=2184 GT:DS:GL:BD 0.30128205 0
1 234586145 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234586148 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8689;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234586175 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0004;AVGPOST=0.9999;RSQ=0.8551;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234586297 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0014;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234586305 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9049;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234586414 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.988;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9932;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234586504 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.985;LDAF=0.3029;AVGPOST=0.9983;RSQ=0.9964;ERATE=0.0004;THETA=0.0003;AC=663;AN=2184 GT:DS:GL:BD 0.30357143 0
1 234586513 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.984;LDAF=0.2988;AVGPOST=0.9982;RSQ=0.9962;ERATE=0.0003;THETA=0.0004;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234586522 rs112162630 A ATG 27572 PASS INDEL;BAVGPOST=0.991;BRSQ=0.979;LDAF=0.2973;AVGPOST=0.9910;RSQ=0.9815;ERATE=0.0014;THETA=0.0004;AC=649;AN=2184 GT:DS:GL:BD 0.29716116 0
1 234586543 . GAT G 581 PASS INDEL;BAVGPOST=0.953;BRSQ=0.522;LDAF=0.0922;AVGPOST=0.8948;RSQ=0.4748;ERATE=0.0239;THETA=0.0006;AC=118;AN=2184 GT:DS:GL:BD 0.05402930 0
1 234586564 . ATG A 114 PASS INDEL;BAVGPOST=0.983;BRSQ=0.609;LDAF=0.0344;AVGPOST=0.9612;RSQ=0.5294;ERATE=0.0115;THETA=0.0004;AC=43;AN=2184 GT:DS:GL:BD 0.01968865 0
1 234586844 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.908;LDAF=0.0006;AVGPOST=0.9995;RSQ=0.5726;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234586863 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0113;AVGPOST=0.9993;RSQ=0.9724;ERATE=0.0003;THETA=0.0004;AC=24;AN=2184 GT:DS:GL:BD 0.01098901 0
1 234586890 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.603;LDAF=0.0029;AVGPOST=0.9973;RSQ=0.6377;ERATE=0.0006;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234587008 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.995;BRSQ=0.988;LDAF=0.2556;AVGPOST=0.9977;RSQ=0.9950;ERATE=0.0004;THETA=0.0006;AC=560;AN=2184 GT:DS:GL:BD 0.25641027 0
1 234587089 . GTCTT G 119 PASS INDEL;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0020;AVGPOST=0.9977;RSQ=0.5113;ERATE=0.0005;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234587531 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.989;LDAF=0.5658;AVGPOST=0.9952;RSQ=0.9926;ERATE=0.0011;THETA=0.0005;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 234587597 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.876;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234587606 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2469;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=539;AN=2184 GT:DS:GL:BD 0.24679486 0
1 234587628 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.976;LDAF=0.0024;AVGPOST=0.9996;RSQ=0.9201;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234587649 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0008;AVGPOST=0.9996;RSQ=0.8303;ERATE=0.0003;THETA=0.0001;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234587692 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.998;LDAF=0.2992;AVGPOST=0.9989;RSQ=0.9976;ERATE=0.0004;THETA=0.0003;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234587701 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.854;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234587803 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3018;AVGPOST=0.9984;RSQ=0.9967;ERATE=0.0004;THETA=0.0003;AC=660;AN=2184 GT:DS:GL:BD 0.30219781 0
1 234587836 . ATATT A 655 PASS INDEL;BAVGPOST=0.997;BRSQ=0.774;LDAF=0.0061;AVGPOST=0.9964;RSQ=0.7706;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234587844 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.907;LDAF=0.0011;AVGPOST=0.9989;RSQ=0.6901;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234587857 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8951;ERATE=0.0003;THETA=0.0003;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234587943 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6915;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234587955 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0024;AVGPOST=0.9999;RSQ=0.9722;ERATE=0.0003;THETA=0.0002;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234587971 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2994;AVGPOST=0.9986;RSQ=0.9971;ERATE=0.0004;THETA=0.0003;AC=654;AN=2184 GT:DS:GL:BD 0.29945055 0
1 234587980 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.926;LDAF=0.0188;AVGPOST=0.9971;RSQ=0.9399;ERATE=0.0003;THETA=0.0002;AC=41;AN=2184 GT:DS:GL:BD 0.01877289 0
1 234588005 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.811;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6612;ERATE=0.0003;THETA=0.0001;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234588068 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.993;LDAF=0.3065;AVGPOST=0.9925;RSQ=0.9855;ERATE=0.0020;THETA=0.0002;AC=668;AN=2184 GT:DS:GL:BD 0.30586082 0
1 234588171 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.993;LDAF=0.1091;AVGPOST=0.9993;RSQ=0.9969;ERATE=0.0003;THETA=0.0002;AC=238;AN=2184 GT:DS:GL:BD 0.10897436 0
1 234588259 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.1192;AVGPOST=0.9988;RSQ=0.9955;ERATE=0.0003;THETA=0.0002;AC=260;AN=2184 GT:DS:GL:BD 0.11904762 0
1 234588320 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.961;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5553;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234588333 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.997;LDAF=0.1900;AVGPOST=0.9990;RSQ=0.9973;ERATE=0.0003;THETA=0.0002;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 234588338 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.887;LDAF=0.0057;AVGPOST=0.9976;RSQ=0.8369;ERATE=0.0003;THETA=0.0004;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234588413 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.930;LDAF=0.0016;AVGPOST=0.9994;RSQ=0.8364;ERATE=0.0003;THETA=0.0005;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234588804 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.911;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5865;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234588820 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.891;LDAF=0.0013;AVGPOST=0.9999;RSQ=0.9516;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234589039 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.768;LDAF=0.0014;AVGPOST=0.9998;RSQ=0.9385;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234589063 . C CTT 148 PASS INDEL;BAVGPOST=0.989;BRSQ=0.776;LDAF=0.0351;AVGPOST=0.9744;RSQ=0.6802;ERATE=0.0040;THETA=0.0004;AC=62;AN=2184 GT:DS:GL:BD 0.02838828 0
1 234589069 . T TTG 1614 PASS INDEL;BAVGPOST=0.994;BRSQ=0.909;LDAF=0.0334;AVGPOST=0.9887;RSQ=0.8529;ERATE=0.0024;THETA=0.0002;AC=65;AN=2184 GT:DS:GL:BD 0.02976190 0
1 234589073 . G GT 2150 PASS INDEL;BAVGPOST=0.898;BRSQ=0.729;LDAF=0.2372;AVGPOST=0.8975;RSQ=0.7862;ERATE=0.0123;THETA=0.0002;AC=520;AN=2184 GT:DS:GL:BD 0.23809524 0
1 234589074 rs71576426 T TG 20968 PASS INDEL;BAVGPOST=0.973;BRSQ=0.942;LDAF=0.3057;AVGPOST=0.9775;RSQ=0.9575;ERATE=0.0020;THETA=0.0003;AC=665;AN=2184 GT:DS:GL:BD 0.30448717 0
1 234589076 rs67653709 T TG 818 PASS INDEL;BAVGPOST=0.994;BRSQ=0.909;LDAF=0.0307;AVGPOST=0.9953;RSQ=0.9301;ERATE=0.0007;THETA=0.0004;AC=66;AN=2184 GT:DS:GL:BD 0.03021978 0
1 234589182 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.813;LDAF=0.0025;AVGPOST=0.9978;RSQ=0.6953;ERATE=0.0005;THETA=0.0001;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234589235 . T TG 9 PASS INDEL;BAVGPOST=1.000;BRSQ=0.862;LDAF=0.0009;AVGPOST=0.9990;RSQ=0.5443;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234589249 . CTTTG C 164 PASS INDEL;BAVGPOST=1.000;BRSQ=0.794;LDAF=0.0016;AVGPOST=0.9982;RSQ=0.5338;ERATE=0.0004;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234589264 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.963;LDAF=0.0015;AVGPOST=0.9981;RSQ=0.5224;ERATE=0.0004;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234589396 . CTAGATAAT C 171 PASS INDEL;BAVGPOST=0.999;BRSQ=0.727;LDAF=0.0009;AVGPOST=0.9992;RSQ=0.5519;ERATE=0.0005;THETA=0.0006;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234589421 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0011;AVGPOST=0.9995;RSQ=0.8096;ERATE=0.0004;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234589422 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.932;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7318;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234589484 . G GT 1674 PASS INDEL;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0119;AVGPOST=0.9994;RSQ=0.9764;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234589641 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9993;RSQ=0.9779;ERATE=0.0003;THETA=0.0004;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234589663 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.5667;AVGPOST=0.9989;RSQ=0.9981;ERATE=0.0003;THETA=0.0002;AC=1239;AN=2184 GT:DS:GL:BD 0.56730771 1
1 234589761 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.938;LDAF=0.0061;AVGPOST=0.9982;RSQ=0.8936;ERATE=0.0003;THETA=0.0005;AC=13;AN=2184 GT:DS:GL:BD 0.00595238 0
1 234589795 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.784;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234589831 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0149;AVGPOST=0.9995;RSQ=0.9834;ERATE=0.0003;THETA=0.0003;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234589886 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.892;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6651;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234589999 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1043;AVGPOST=0.9986;RSQ=0.9951;ERATE=0.0003;THETA=0.0002;AC=226;AN=2184 GT:DS:GL:BD 0.10347985 0
1 234590115 . G GC 34 PASS INDEL;BAVGPOST=0.999;BRSQ=0.627;LDAF=0.0056;AVGPOST=0.9917;RSQ=0.4618;ERATE=0.0013;THETA=0.0002;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234590280 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0;LDAF=0.0007;AVGPOST=0.9991;RSQ=0.4225;ERATE=0.0003;THETA=0.0013;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234590346 . G GA 384 PASS INDEL;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0059;AVGPOST=0.9958;RSQ=0.7071;ERATE=0.0010;THETA=0.0003;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234590421 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.1409;AVGPOST=0.9987;RSQ=0.9957;ERATE=0.0005;THETA=0.0003;AC=307;AN=2184 GT:DS:GL:BD 0.14056776 0
1 234590556 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.695;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.5827;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234590594 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234590611 . TC T 14 PASS INDEL;BAVGPOST=1.000;BRSQ=0.957;LDAF=0.0011;AVGPOST=0.9985;RSQ=0.4425;ERATE=0.0004;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234590629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.830;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234590707 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.921;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9093;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234590796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5938;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234591007 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.987;LDAF=0.0170;AVGPOST=0.9990;RSQ=0.9774;ERATE=0.0003;THETA=0.0006;AC=37;AN=2184 GT:DS:GL:BD 0.01694139 0
1 234591048 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2391;AVGPOST=0.9992;RSQ=0.9980;ERATE=0.0003;THETA=0.0005;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 234591064 . T G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.996;LDAF=0.1055;AVGPOST=0.9984;RSQ=0.9939;ERATE=0.0003;THETA=0.0001;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234591091 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.997;LDAF=0.2606;AVGPOST=0.9969;RSQ=0.9939;ERATE=0.0005;THETA=0.0007;AC=569;AN=2184 GT:DS:GL:BD 0.26053113 0
1 234591170 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.943;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7377;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234591409 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.702;LDAF=0.0004;AVGPOST=0.9994;RSQ=0.4378;ERATE=0.0003;THETA=0.0003;AC=0;AN=2184 GT:DS:GL:BD 0.00000000 0
1 234591441 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.915;LDAF=0.0032;AVGPOST=0.9990;RSQ=0.8632;ERATE=0.0003;THETA=0.0004;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234591459 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.924;LDAF=0.0041;AVGPOST=0.9996;RSQ=0.9580;ERATE=0.0003;THETA=0.0003;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234591591 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0136;AVGPOST=0.9994;RSQ=0.9811;ERATE=0.0003;THETA=0.0003;AC=29;AN=2184 GT:DS:GL:BD 0.01327839 0
1 234591743 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0006;AVGPOST=0.9997;RSQ=0.7534;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234591833 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.933;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8271;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234591949 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.949;LDAF=0.0004;AVGPOST=0.9998;RSQ=0.7656;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234591978 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0047;AVGPOST=0.9995;RSQ=0.9446;ERATE=0.0003;THETA=0.0004;AC=10;AN=2184 GT:DS:GL:BD 0.00457875 0
1 234592051 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.832;LDAF=0.0015;AVGPOST=0.9979;RSQ=0.4113;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234592202 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1904;AVGPOST=0.9981;RSQ=0.9942;ERATE=0.0005;THETA=0.0002;AC=416;AN=2184 GT:DS:GL:BD 0.19047619 0
1 234592293 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.887;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5844;ERATE=0.0004;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234592378 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.821;LDAF=0.0013;AVGPOST=0.9991;RSQ=0.7153;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234592405 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.991;LDAF=0.1596;AVGPOST=0.9947;RSQ=0.9847;ERATE=0.0007;THETA=0.0002;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 234592451 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.820;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0009;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234592468 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.829;LDAF=0.0042;AVGPOST=0.9979;RSQ=0.7888;ERATE=0.0004;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234592519 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.969;LDAF=0.0012;AVGPOST=0.9986;RSQ=0.5953;ERATE=0.0003;THETA=0.0002;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234592522 . A C 100 PASS LCSNP;EXSNP;BAVGPOST=0.994;BRSQ=0.989;LDAF=0.1850;AVGPOST=0.9940;RSQ=0.9831;ERATE=0.0013;THETA=0.0002;AC=403;AN=2184 GT:DS:GL:BD 0.18452381 0
1 234592707 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.2388;AVGPOST=0.9990;RSQ=0.9977;ERATE=0.0004;THETA=0.0003;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 234592734 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.956;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6752;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234592783 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.975;LDAF=0.0043;AVGPOST=0.9992;RSQ=0.9211;ERATE=0.0003;THETA=0.0002;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234592860 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.995;LDAF=0.0965;AVGPOST=0.9986;RSQ=0.9937;ERATE=0.0003;THETA=0.0002;AC=212;AN=2184 GT:DS:GL:BD 0.09706960 0
1 234592881 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.914;LDAF=0.0010;AVGPOST=0.9998;RSQ=0.9203;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234593137 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.8415;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234593142 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.928;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7976;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234593323 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0124;AVGPOST=1.0000;RSQ=0.9983;ERATE=0.0003;THETA=0.0002;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0
1 234593349 . AATTC A 429 PASS INDEL;BAVGPOST=0.998;BRSQ=0.749;LDAF=0.0060;AVGPOST=0.9966;RSQ=0.7577;ERATE=0.0006;THETA=0.0014;AC=12;AN=2184 GT:DS:GL:BD 0.00549451 0
1 234593403 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.1069;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0003;AC=233;AN=2184 GT:DS:GL:BD 0.10668498 0
1 234593497 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.986;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234593526 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0019;AVGPOST=1.0000;RSQ=0.9882;ERATE=0.0004;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234593537 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0023;AVGPOST=1.0000;RSQ=0.9906;ERATE=0.0003;THETA=0.0004;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234593664 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0009;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234593678 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.691;LDAF=0.0009;AVGPOST=0.9995;RSQ=0.7740;ERATE=0.0003;THETA=0.0002;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234593708 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.2391;AVGPOST=0.9995;RSQ=0.9987;ERATE=0.0003;THETA=0.0002;AC=523;AN=2184 GT:DS:GL:BD 0.23946886 0
1 234593786 rs71779035 ATTAC A 1620 PASS INDEL;BAVGPOST=0.997;BRSQ=0.963;LDAF=0.0217;AVGPOST=0.9976;RSQ=0.9539;ERATE=0.0005;THETA=0.0002;AC=48;AN=2184 GT:DS:GL:BD 0.02197802 0
1 234593816 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.806;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.4275;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234593842 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.974;LDAF=0.0155;AVGPOST=0.9982;RSQ=0.9542;ERATE=0.0006;THETA=0.0004;AC=32;AN=2184 GT:DS:GL:BD 0.01465201 0
1 234594086 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.968;LDAF=0.0008;AVGPOST=0.9992;RSQ=0.5817;ERATE=0.0005;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234594174 . T TG 24 PASS INDEL;BAVGPOST=1.000;BRSQ=0.770;LDAF=0.0007;AVGPOST=0.9995;RSQ=0.6862;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234594188 . A T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.3569;AVGPOST=0.9995;RSQ=0.9991;ERATE=0.0004;THETA=0.0007;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 234594267 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.3583;AVGPOST=0.9986;RSQ=0.9974;ERATE=0.0004;THETA=0.0004;AC=783;AN=2184 GT:DS:GL:BD 0.35851648 0
1 234594309 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.896;LDAF=0.0106;AVGPOST=0.9979;RSQ=0.9112;ERATE=0.0004;THETA=0.0004;AC=22;AN=2184 GT:DS:GL:BD 0.01007326 0
1 234594366 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0008;AVGPOST=0.9993;RSQ=0.6294;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234594452 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.990;LDAF=0.0106;AVGPOST=0.9998;RSQ=0.9917;ERATE=0.0003;THETA=0.0002;AC=23;AN=2184 GT:DS:GL:BD 0.01053114 0
1 234594516 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.923;LDAF=0.0008;AVGPOST=0.9994;RSQ=0.6819;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234594601 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0021;AVGPOST=0.9995;RSQ=0.8825;ERATE=0.0003;THETA=0.0002;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234594629 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.946;LDAF=0.0005;AVGPOST=0.9998;RSQ=0.7933;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234594655 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.948;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7497;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234594683 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.940;LDAF=0.0004;AVGPOST=1.0000;RSQ=0.9500;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234594727 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.3560;AVGPOST=0.9982;RSQ=0.9971;ERATE=0.0006;THETA=0.0004;AC=777;AN=2184 GT:DS:GL:BD 0.35576922 0
1 234594819 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9571;ERATE=0.0003;THETA=0.0003;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234594947 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.1783;AVGPOST=1.0000;RSQ=0.9998;ERATE=0.0003;THETA=0.0004;AC=390;AN=2184 GT:DS:GL:BD 0.17857143 0
1 234594981 . C A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0022;AVGPOST=0.9999;RSQ=0.9805;ERATE=0.0008;THETA=0.0029;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234595070 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0119;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234595103 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234595296 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.3583;AVGPOST=0.9981;RSQ=0.9969;ERATE=0.0003;THETA=0.0004;AC=784;AN=2184 GT:DS:GL:BD 0.35897437 0
1 234595300 . C G 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.998;LDAF=0.3567;AVGPOST=0.9994;RSQ=0.9989;ERATE=0.0003;THETA=0.0003;AC=780;AN=2184 GT:DS:GL:BD 0.35714287 0
1 234595330 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.999;LDAF=0.2410;AVGPOST=0.9987;RSQ=0.9978;ERATE=0.0003;THETA=0.0003;AC=527;AN=2184 GT:DS:GL:BD 0.24130036 0
1 234595387 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.996;LDAF=0.0051;AVGPOST=0.9998;RSQ=0.9787;ERATE=0.0003;THETA=0.0003;AC=11;AN=2184 GT:DS:GL:BD 0.00503663 0
1 234595426 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.978;LDAF=0.0029;AVGPOST=0.9990;RSQ=0.8483;ERATE=0.0004;THETA=0.0001;AC=6;AN=2184 GT:DS:GL:BD 0.00274725 0
1 234595456 . G T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.982;LDAF=0.0121;AVGPOST=0.9994;RSQ=0.9795;ERATE=0.0003;THETA=0.0005;AC=26;AN=2184 GT:DS:GL:BD 0.01190476 0
1 234595513 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.984;LDAF=0.1067;AVGPOST=0.9955;RSQ=0.9830;ERATE=0.0004;THETA=0.0004;AC=230;AN=2184 GT:DS:GL:BD 0.10531136 0
1 234595544 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.681;LDAF=0.0051;AVGPOST=0.9930;RSQ=0.4560;ERATE=0.0005;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234595750 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.997;LDAF=0.0043;AVGPOST=0.9997;RSQ=0.9691;ERATE=0.0003;THETA=0.0005;AC=9;AN=2184 GT:DS:GL:BD 0.00412088 0
1 234595853 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.913;LDAF=0.0016;AVGPOST=0.9996;RSQ=0.8879;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234595855 . A AT 53 PASS INDEL;BAVGPOST=0.999;BRSQ=0.775;LDAF=0.0033;AVGPOST=0.9970;RSQ=0.6057;ERATE=0.0004;THETA=0.0004;AC=4;AN=2184 GT:DS:GL:BD 0.00183150 0
1 234596090 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.999;LDAF=0.0005;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234596202 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=1.000;LDAF=0.3574;AVGPOST=1.0000;RSQ=1.0000;ERATE=0.0003;THETA=0.0007;AC=781;AN=2184 GT:DS:GL:BD 0.35760072 0
1 234596274 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234596367 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.962;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.9135;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234596368 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.998;LDAF=0.0023;AVGPOST=0.9999;RSQ=0.9813;ERATE=0.0003;THETA=0.0003;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234596389 . G C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.954;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234596407 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.967;LDAF=0.0039;AVGPOST=0.9995;RSQ=0.9603;ERATE=0.0003;THETA=0.0003;AC=8;AN=2184 GT:DS:GL:BD 0.00366300 0
1 234596408 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=1.000;LDAF=0.0014;AVGPOST=0.9999;RSQ=0.9546;ERATE=0.0003;THETA=0.0003;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234596439 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.993;LDAF=0.0010;AVGPOST=0.9999;RSQ=0.9547;ERATE=0.0003;THETA=0.0004;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234596493 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.970;LDAF=0.0006;AVGPOST=0.9996;RSQ=0.7282;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234596609 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.606;LDAF=0.0018;AVGPOST=0.9978;RSQ=0.5446;ERATE=0.0004;THETA=0.0006;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234596625 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.958;LDAF=0.0014;AVGPOST=0.9991;RSQ=0.7744;ERATE=0.0003;THETA=0.0006;AC=2;AN=2184 GT:DS:GL:BD 0.00091575 0
1 234596646 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.981;LDAF=0.0024;AVGPOST=0.9995;RSQ=0.9156;ERATE=0.0003;THETA=0.0006;AC=5;AN=2184 GT:DS:GL:BD 0.00228938 0
1 234596647 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.999;BRSQ=0.887;LDAF=0.0016;AVGPOST=0.9993;RSQ=0.7846;ERATE=0.0003;THETA=0.0004;AC=3;AN=2184 GT:DS:GL:BD 0.00137363 0
1 234596654 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.996;BRSQ=0.991;LDAF=0.1591;AVGPOST=0.9982;RSQ=0.9941;ERATE=0.0003;THETA=0.0005;AC=348;AN=2184 GT:DS:GL:BD 0.15934066 0
1 234596692 . G GT 140 PASS INDEL;BAVGPOST=1.000;BRSQ=0.914;LDAF=0.0011;AVGPOST=0.9987;RSQ=0.5407;ERATE=0.0003;THETA=0.0007;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234596754 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.980;LDAF=0.0006;AVGPOST=0.9998;RSQ=0.8138;ERATE=0.0003;THETA=0.0002;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234596794 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.826;LDAF=0.0007;AVGPOST=0.9996;RSQ=0.7186;ERATE=0.0003;THETA=0.0003;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234596796 . C T 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.971;LDAF=0.0005;AVGPOST=0.9994;RSQ=0.4445;ERATE=0.0003;THETA=0.0004;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234596797 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.959;LDAF=0.0197;AVGPOST=0.9981;RSQ=0.9641;ERATE=0.0003;THETA=0.0010;AC=44;AN=2184 GT:DS:GL:BD 0.02014652 0
1 234596850 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.997;BRSQ=0.996;LDAF=0.2620;AVGPOST=0.9954;RSQ=0.9908;ERATE=0.0010;THETA=0.0011;AC=573;AN=2184 GT:DS:GL:BD 0.26236263 0
1 234596944 . T A 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.809;LDAF=0.0069;AVGPOST=0.9971;RSQ=0.8368;ERATE=0.0004;THETA=0.0008;AC=14;AN=2184 GT:DS:GL:BD 0.00641026 0
1 234596996 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=1.000;BRSQ=0.953;LDAF=0.0005;AVGPOST=0.9999;RSQ=0.8642;ERATE=0.0003;THETA=0.0005;AC=1;AN=2184 GT:DS:GL:BD 0.00045788 0
1 234597030 . T C 100 PASS LCSNP;EXSNP;BAVGPOST=0.998;BRSQ=0.996;LDAF=0.2438;AVGPOST=0.9979;RSQ=0.9952;ERATE=0.0006;THETA=0.0005;AC=533;AN=2184 GT:DS:GL:BD 0.24404761 0
1 234597073 rs34367943 CAG C 22518 PASS INDEL;BAVGPOST=0.997;BRSQ=0.994;LDAF=0.2436;AVGPOST=0.9964;RSQ=0.9924;ERATE=0.0004;THETA=0.0018;AC=534;AN=2184 GT:DS:GL:BD 0.24450549 0
1 234597140 . A G 100 PASS LCSNP;EXSNP;BAVGPOST=0.959;BRSQ=0.853;LDAF=0.8423;AVGPOST=0.9361;RSQ=0.8193;ERATE=0.0133;THETA=0.0005;AC=1876;AN=2184 GT:DS:GL:BD 0.85897434 1
1 234597155 . G A 100 PASS LCSNP;EXSNP;BAVGPOST=0.993;BRSQ=0.770;LDAF=0.0163;AVGPOST=0.9903;RSQ=0.7672;ERATE=0.0006;THETA=0.0006;AC=27;AN=2184 GT:DS:GL:BD 0.01236264 0