Publications

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Journals | Conferences | Books/Book Chapters | Publications (non-peer-reviewed) | Theses

Journals

Title: KeBABS: an R package for kernel-based analysis of biological sequences
Author(s): Johannes Palme, Sepp Hochreiter, Ulrich Bodenhofer
Published: Bioinformatics, Advance Access published March 25, 2015 doi:10.1093/bioinformatics/btv176
Download: PDF
Abstract: Abstract
 
Title: Using transcriptomics to guide lead optimization in drug discovery projects
Author(s): Bie Verbist, Günter Klambauer, Liesbet Vervoort, Willem Talloen, QSTAR Consortium, Ziv Shkedy, Olivier Thas, Andreas Bender, Hinrich W.H. Göhlmann, Sepp Hochreiter
Published: Drug Discovery Today, In Press, Available online 10 January 2015 doi:10.1016/j.drudis.2014.12.014
 
Title: Connecting gene expression data from connectivity map and in silico target predictions for small molecule mechanism-of-action analysis
Author(s): Aakash Chavan Ravindranath, Nolen Perualila-Tan, Adetayo Kasim, Georgios Drakakis, Sonia Liggi, Suzanne C. Brewerton, Daniel Mason, Michael J. Bodkin, David A. Evans, Aditya Bhagwat, Willem Talloen, Hinrich W. H. Göhlmann, QSTAR Consortium, Ziv Shkedy, Andreas Bender
Published: Mol. BioSyst., 11:86-96, 2015 doi:10.1039/C4MB00328D
Download: Abstract
 
Title: Graded dominance and related graded properties of fuzzy connectives
Author(s): Libor Behounek, Ulrich Bodenhofer, Petr Cintula, Susanne Saminger-Platz, Peter Sarkoci
Published: Fuzzy Sets and Systems, 262:78-101, 2015 doi:10.1016/j.fss.2014.04.025



Conferences



Books/Book Chapters



Publications (non-peer-reviewed)

Title: Toxicity Prediction using Deep Learning
Author(s): Thomas Unterthiner, Andreas Mayr, Günter Klambauer, Sepp Hochreiter
Published: arXiv.org, Mar 2015
Download: arXiv:1503.01445 [stat.ML]
 
Title: Rectified Factor Networks
Author(s): Djork-Arné Clevert, Thomas Unterthiner, Andreas Mayr, Hubert Ramsauer, Sepp Hochreiter
Published: arXiv.org, Feb 2015
Download: arXiv:1502.06464 [cs.LG]



Theses

Title: Detecting CNVs in the 1000 Genomes Project Data Using cn.MOPS and Relating the Results to Transcriptome Sequencing Data
Published: Master Thesis, 2015
Author(s): Anna Maria Langmüller