Software / Services

Software

DEXUS: Identifying Differential Expression in RNA-Seq Studies with Unknown Conditions

Rchemcpp: An R package for computing the similarity of molecules

fastseg: A fast segmentation algorithm based on the cyber t-test

cn.MOPS: mixture of Poissons for discovering copy number variations in next-generation sequencing data with a low false discovery rate

cn.FARMS: a latent variable model to detect copy number variations in microarray data

Factor Analysis for Bicluster Acquisition (FABIA)

PrOCoil - Predicting the Oligomerization of Coiled Coil Proteins (R package)

APCluster - An R Package for Affinity Propagation Clustering

RoCoCo - An R Package Implementing a Robust Rank Correlation Coefficient and a Corresponding Test

"Long Short-Term Memory" for Protein classification (LSTM_protein)

"Factor Analysis for Robust Microarray Summarization" (FARMS) algorithm and I/NI calls

"P-SVM algorithm" (PSVM) a software for support vector classification, regression and feature extraction

FMS: Software for regularizing neural networks with "Flat Minimum Search". Flat Minimum Search Software

RTRL: Software for training recurrent neural networks. Real Time Recurrent Learning Software

LSTM: Software for the state of the art recurrent neural network. Long Short-Term Memory Software

Services

PrOCoil - Predicting the Oligomerization of Coiled Coil Proteins (Web Interface)

Demo Tools

Machine Learning Demos in Mathematica®