Ulrich Bodenhofer's Publications

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Extended Abstracts and Poster Abstracts

@inproceedings{Bodenhofer98f,
  author = {U. Bodenhofer},
  title = {A new approach to fuzzy orderings},
  booktitle = {Abstracts 4th Int. Conf. on Fuzzy Sets Theory and
                  Its Applications},
  pages = {12--13},
  address = {Liptovsk\'y J\'an},
  month = {February},
  year = 1998,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/Bodenhofer98f.pdf}
}
@inproceedings{Bodenhofer98d,
  author = {U. Bodenhofer},
  title = {Overcoming the ``crispness'' of fuzzy orderings},
  booktitle = {Abstracts COST Action 15 WG2/WG3 Meeting},
  address = {Mariehamn},
  year = 1998,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/Bodenhofer98d.pdf}
}
@inproceedings{Bodenhofer00c,
  author = {U. Bodenhofer},
  title = {Generalized congruence and closures: basic
                  properties and applications to fuzzy rule-based
                  systems},
  booktitle = {Abstracts 5th Int. Conf. on Fuzzy Sets Theory and
                  Its Applications},
  pages = 46,
  address = {Liptovsk\'y J\'an},
  month = {February},
  year = 2000,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/Bodenhofer00c.pdf}
}
@inproceedings{BodenhoferDeCockKerre00,
  author = {U. Bodenhofer and M. {De Cock} and E. E. Kerre},
  title = {Opening and closure operators of fuzzy preorderings:
                  basic properties and applications to fuzzy
                  rule-based systems},
  booktitle = {Abstracts 21st Linz Seminar on Fuzzy Set Theory},
  pages = {29--30},
  address = {Linz},
  month = {June},
  year = 2000,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/BodenhoferDeCockKerre00.pdf}
}
@inproceedings{BodenhoferKlawonn01,
  author = {U. Bodenhofer},
  title = {Linearity axioms for fuzzy orderings: concepts,
                  properties, and difficulties},
  booktitle = {Abstracts 22nd Linz Seminar on Fuzzy Set Theory},
  editor = {E. P. Klement and M. Roubens},
  address = {Linz},
  month = {February},
  pages = {19--21},
  year = 2001,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/BodenhoferKlawonn01.pdf}
}
@inproceedings{BodenhoferSaminger02,
  author = {U. Bodenhofer and S. Saminger},
  title = {Transitivity-preserving aggregation of fuzzy
                  relations},
  booktitle = {Abstracts 6th Int. Conf. on Fuzzy Sets Theory and
                  Its Applications},
  pages = {36--37},
  address = {Liptovsk\'y J\'an},
  month = {February},
  year = 2002,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/BodenhoferSaminger02.pdf}
}
@inproceedings{SamingerBodenhofer02,
  author = {S. Saminger and U. Bodenhofer},
  title = {Aggregation in evaluation of computer-aided
                  assessment},
  booktitle = {Abstracts 6th Int. Conf. on Fuzzy Sets Theory and
                  Its Applications},
  pages = {110--111},
  address = {Liptovsk\'y J\'an},
  month = {February},
  year = 2002,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/SamingerBodenhofer02.pdf}
}
@inproceedings{Bodenhofer02d,
  author = {U. Bodenhofer},
  title = {Monotonicity in vague environments},
  booktitle = {Abstracts 23rd Linz Seminar on Fuzzy Set Theory},
  editor = {P. Diamond and E. P. Klement},
  pages = {9--10},
  address = {Linz},
  month = {February},
  year = 2002,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/Bodenhofer02d.pdf}
}
@inproceedings{SamingerMesiarBodenhofer02b,
  author = {S. Saminger and R. Mesiar and U. Bodenhofer},
  title = {$T$-transitivity and domination},
  booktitle = {Abstracts 23rd Linz Seminar on Fuzzy Set Theory},
  editor = {P. Diamond and E. P. Klement},
  pages = {55--59},
  address = {Linz},
  month = {February},
  year = 2002,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/SamingerMesiarBodenhofer02b.pdf}
}
@inproceedings{Bodenhofer03k,
  author = {U. Bodenhofer},
  title = {Applications of fuzzy orderings: an overview},
  booktitle = {Abstracts 24th Linz Seminar on Fuzzy Set Theory},
  editor = {E. P. Klement and R. Mesiar},
  pages = {121--122},
  address = {Linz},
  month = {February},
  year = 2003,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/Bodenhofer03k.pdf}
}
@inproceedings{Bodenhofer03j,
  author = {U. Bodenhofer},
  title = {Fuzzy {L}ogic-basiertes {M}achine {L}earning in der
                  {P}rozessmodellierung},
  booktitle = {Tagungsunterlagen 2. {I}ndustrielles {S}ymposium
                  {M}echatronik},
  pages = {36--37},
  address = {Linz},
  month = {May},
  year = 2003,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/Bodenhofer03j.pdf}
}
@inproceedings{Bodenhofer04b,
  author = {U. Bodenhofer},
  title = {Fuzzy rule-based machine learning in process
                  modeling},
  booktitle = {Abstracts 7th Int. Conf. on Fuzzy Sets Theory and
                  Its Applications},
  pages = {7--8},
  address = {Liptovsk\'y J\'an},
  month = {February},
  year = 2004,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/Bodenhofer04b.pdf}
}
@inproceedings{BodenhoferDeBaetsFodor04,
  author = {U. Bodenhofer and B. {De Baets} and J. Fodor},
  title = {A review of construction and representation results
                  for fuzzy weak orders},
  booktitle = {Abstracts 25th Linz Seminar on Fuzzy Set Theory},
  editor = {E. P. Klement and E. Pap},
  pages = {27--28},
  address = {Linz},
  month = {February},
  year = 2004,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/BodenhoferDeBaetsFodor04.pdf}
}
@inproceedings{DrobicsBodenhoferMittendorfer-Holzer04,
  author = {M. Drobics and U. Bodenhofer and
                  M. Mittendorfer-Holzer},
  title = {A Three-Stage Approach to Descriptive Data Analysis:
                  Identifying Clusters and Corresponding Interpretable
                  Descriptions from Large Data Sets},
  booktitle = {Proc. 7th COST Action 276 Workshop},
  address = {Ankara, Turkey},
  month = {November},
  year = 2004,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/DrobicsBodenhoferMittendorfer-Holzer04.pdf}
}
@inproceedings{BodenhoferBehounekCintula05,
  author = {U. Bodenhofer and L. B\v{e}hounek and P. Cintula},
  title = {Relations in higher-order fuzzy logic {III}},
  booktitle = {Abstracts 26th Linz Seminar on Fuzzy Set Theory},
  editor = {J. Fodor and E. P. Klement and M. Roubens},
  address = {Linz},
  month = {February},
  year = 2005,
  pages = {20--22},
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/BodenhoferBehounekCintula05.pdf}
}
@inproceedings{FodorDeBaetsBodenhofer05,
  author = {J. Fodor and B. {De Baets} and U. Bodenhofer},
  title = {Fuzzy weak orders --- construction and
                  characterization},
  booktitle = {Proc. 61st MCDA Workshop},
  year = 2005
}
@inproceedings{Bodenhofer06b,
  author = {U. Bodenhofer},
  title = {Similarity-based fuzzy orderings: recent advances},
  booktitle = {Abstracts 8th Int. Conf. on Fuzzy Sets Theory and
                  Its Applications},
  pages = {26--27},
  address = {Liptovsk\'y J\'an},
  month = {February},
  year = 2006,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/Bodenhofer06b.pdf}
}
@inproceedings{BehounekBodenhoferCintulaSaminger-Platz08,
  author = {L. B\v{e}hounek and U. Bodenhofer and P. Cintula and
                  S. Saminger-Platz},
  title = {Graded dominance},
  booktitle = {Abstracts 29th Linz Seminar on Fuzzy Set Theory},
  editor = {E. P. Klement and S. E. Rodabough and L. N. Stout},
  address = {Linz},
  month = {February},
  year = 2008,
  pages = {11--14},
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/BehounekBodenhoferCintulaSaminger-Platz08.pdf}
}
@inproceedings{AbfalterMahrenholzBodenhoferHochreiter08,
  author = {I. G. Abfalter and C. C. Mahrenholz and
                  U. Bodenhofer and S. Hochreiter},
  title = {Analyzing Coiled Coil Proteins With Support Vector
                  Machines to Design New Anti-Viral Drugs},
  booktitle = {16th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology},
  address = {Toronto},
  month = {July},
  year = 2008,
  note = {(poster)},
  pdf = {http://www.iscb.org/uploaded/css/32/4243.pdf}
}
@inproceedings{LippPaarPasterStockingerBodenhoferSonnleitner08,
  author = {A.-M. Lipp and C. Paar and W. Paster and
                  H. Stockinger and U. Bodenhofer and A. Sonnleitner},
  title = {Characterizing Calcium Signaling in {T} cells},
  booktitle = {6th GEN-AU Summerschool},
  address = {Litschau},
  month = {September},
  year = 2008,
  note = {(poster)},
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/LippPaarPasterStockingerBodenhoferSonnleitner08.pdf}
}
@inproceedings{MahrenholzAbfalterBodenhoferVolkmerHochreiter09,
  author = {C. C. Mahrenholz and I. G. Abfalter and
                  U. Bodenhofer and R. Volkmer and S. Hochreiter},
  title = {Defining distinctive rules for stoichiometry and
                  recognition of coiled coil proteins using
                  bioinformatical methods},
  booktitle = {9th German Peptide Symposium},
  address = {G\"ottingen},
  month = {March},
  year = 2009,
  note = {(poster)}
}
@inproceedings{AbfalterMahrenholzBodenhoferHochreiter09,
  author = {I. G. Abfalter and C. C. Mahrenholz and
                  U. Bodenhofer and S. Hochreiter},
  title = {New insights into coiled coil formation by means of
                  support vector machines},
  booktitle = {17th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology \&\ 8th Europ. Conf. on
                  Computational Biology},
  address = {Stockholm},
  month = {June/July},
  year = 2009,
  note = {(poster)},
  pdf = {http://www.iscb.org/uploaded/css/43/12064.pdf}
}
@inproceedings{ChelbatBodenhoferHochreiter09,
  author = {N. Chelbat and U. Bodenhofer and S. Hochreiter},
  title = {Filtering and Identifying non-reliable probes in
                  {Affymetrix GeneChip\RegTradeMark} platforms},
  booktitle = {17th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology \&\ 8th Europ. Conf. on
                  Computational Biology},
  address = {Stockholm},
  month = {June/July},
  year = 2009,
  note = {(poster)},
  pdf = {http://www.iscb.org/uploaded/css/38/10483.pdf}
}
@inproceedings{BodenhoferLichtbergerKlawonn09,
  author = {U. Bodenhofer and W. Lichtberger and F. Klawonn},
  title = {Prediction of Prokaryotic Transcription Units from
                  Microarray Data Revisited},
  booktitle = {17th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology \&\ 8th Europ. Conf. on
                  Computational Biology},
  address = {Stockholm},
  month = {June/July},
  year = 2009,
  note = {(poster)},
  pdf = {http://www.iscb.org/uploaded/css/43/12010.pdf}
}
@inproceedings{BehounekBodenhoferCintulaSaminger-PlatzSarkoci10,
  author = {L. B\v{e}hounek and U. Bodenhofer and P. Cintula and
                  S. Saminger-Platz and P. Sarkoci},
  title = {Graded properties of t-norms},
  booktitle = {Abstracts 10th. Int. Conf. on Fuzzy Set Theory and
                  Applications},
  address = {Liptovsk\'y J\'an},
  month = {February},
  year = 2010,
  pages = 30,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/BehounekBodenhoferCintulaSaminger-PlatzSarkoci10.pdf}
}
@inproceedings{BehounekBodenhoferCintulaSaminger-PlatzSarkoci10b,
  author = {L. B\v{e}hounek and U. Bodenhofer and P. Cintula and
                  S. Saminger-Platz and P. Sarkoci},
  title = {Graded properties of dominance},
  booktitle = {Abstracts 10th. Int. Conf. on Fuzzy Set Theory and
                  Applications},
  address = {Liptovsk\'y J\'an},
  month = {February},
  year = 2010,
  pages = 31,
  pdf = {http://www.bioinf.jku.at/people/bodenhofer/private/publications/pdf/BehounekBodenhoferCintulaSaminger-PlatzSarkoci10b.pdf}
}
@inproceedings{LippPaarBodenhoferSonnleitner10,
  author = {A. Lipp and C. Paar and U. Bodenhofer and
                  A. Sonnleitner},
  title = {Systematic characterization of initial calcium
                  signaling in {T} cells},
  booktitle = {Biophysical Society 54th Annual Meeting},
  address = {San Francisco, CA},
  month = {February},
  year = 2010,
  doi = {10.1016/j.bpj.2009.12.131}
}
@inproceedings{ChelbatKasimBodenhoferTalloenHochreiterShkedyGoehlmann10,
  author = {N. Chelbat and A. Kasim and U. Bodenhofer and
                  W. Talloen and S. Hochreiter and Z. Shkedy and
                  H. W. H. G\"ohlmann},
  title = {Identification of non reliable probes on customized
                  Affymetrix Mouse430\_2 platform},
  booktitle = {18th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology},
  address = {Boston, MA},
  month = {July},
  year = 2010,
  note = {(poster)},
  pdf = {http://www.iscb.org/uploaded/css/58/17224.pdf}
}
@inproceedings{HochreiterBodenhoferHeuselMayrMittereckerKasimKhamiakova10b,
  author = {S. Hochreiter and U. Bodenhofer and M. Heusel and
                  A. Mayr and A. Mitterecker and A. Kasim and
                  T. Khamiakova and S. {Van Sanden} and D. Lin and
                  W. Talloen and L. Bijnens and H. W. H. G\"ohlmann
                  and Z. Shkedy and D.-A. Clevert},
  title = {{FABIA:} factor analysis for bicluster acquisition},
  booktitle = {18th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology},
  address = {Boston, MA},
  month = {July},
  year = 2010,
  note = {(poster)},
  pdf = {http://www.iscb.org/uploaded/css/58/17259.pdf}
}
@inproceedings{MahrenholzAbfalterBodenhoferVolkmerHochreiter10,
  author = {C. C. Mahrenholz and I. G. Abfalter and
                  U. Bodenhofer and R. Volkmer and S. Hochreiter},
  title = {{PrOCoil} --- advances in predicting two- and
                  three-stranded coiled coils},
  booktitle = {18th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology},
  address = {Boston, MA},
  month = {July},
  year = 2010,
  note = {(poster)},
  pdf = {http://www.iscb.org/uploaded/css/68/18732.pdf}
}
@inproceedings{BodenhoferKothmeierAbfalterMahrenholzHochreiter10,
  author = {U. Bodenhofer and A. Kothmeier and I. G. Abfalter
                  and C. C. Mahrenholz and S. Hochreiter},
  title = {Decoding sequence classification models for
                  acquiring new biological insights},
  booktitle = {18th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology},
  address = {Boston, MA},
  month = {July},
  year = 2010,
  note = {(poster)},
  pdf = {http://www.iscb.org/uploaded/css/68/18695.pdf}
}
@inproceedings{MahrenholzAbfalterBodenhoferHochreiterVolkmer10,
  author = {C. C. Mahrenholz and I. G. Abfalter and
                  U. Bodenhofer and R. Volkmer and S. Hochreiter},
  title = {Complex networks govern coiled coil oligomerization:
                  a multi-method approach},
  booktitle = {31st Europ. Peptide Symp.},
  address = {Copenhagen},
  month = {September},
  year = 2010,
  note = {(poster)},
  doi = {10.1002/psc.1303}
}
@inproceedings{ChelbatBodenhoferHochreiter10,
  author = {N. Chelbat and U. Bodenhofer and S. Hochreiter},
  title = {Possible sources of wrongly performing probes on
                  {Affymetrix} {GeneChip\RegTradeMark} platforms},
  booktitle = {X Jornadas de Bioinform\'atica},
  address = {Torremolinos},
  month = {October},
  note = {(poster)},
  year = 2010
}
@inproceedings{RiosChelbatMunoz-MeridaMartin-RequenaMateos-DuranBenzekriKlambauer10,
  author = {J. R\'ios and N. Chelbat and A. Mu\~noz-M\'erida and
                  V. Mart\'in-Requena and J. M. Mateos-Dur\'an and
                  H. Benzekri and G. Klambauer and U. Bodenhofer and
                  A. Mayr and A. Mitterecker and S. Hochreiter and
                  O. Trelles},
  title = {Collaborative action for the promotion of {HPC}
                  applied to {NGS}},
  booktitle = {X Jornadas de Bioinform\'atica},
  address = {Torremolinos},
  month = {October},
  note = {(poster)},
  year = 2010
}
@inproceedings{MahrenholzAbfalterBodenhoferVolkmerHochreiter11b,
  author = {C. C. Mahrenholz and I. G. Abfalter and
                  U. Bodenhofer and R. Volkmer and S. Hochreiter},
  title = {Complex networks govern coiled coil oligomerization
                  --- Predicting and profiling by means of a machine
                  learning approach},
  booktitle = {19th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology \&\ 10th Europ. Conf. on
                  Computational Biology},
  address = {Vienna},
  month = {June/July},
  year = 2011,
  note = {(poster)},
  pdf = {http://www.iscb.org/uploaded/css/81/19955.pdf}
}
@inproceedings{CorralMunoz-MeridaChelbatKlambauerBodenhoferMayr11,
  author = {P. Corral and A. Mu\~noz-M\'erida and N. Chelbat and
                  G. Klambauer and U. Bodenhofer and A. Mayr and
                  A. Mitterecker and S. Hochreiter and O. Trelles},
  title = {Collaborative action between Spain and Austria to
                  enhance the application of high performance
                  computing to high throughput technologies},
  booktitle = {19th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology \&\ 10th Europ. Conf. on
                  Computational Biology},
  address = {Vienna},
  month = {June/July},
  year = 2011,
  note = {(poster)}
}
@inproceedings{SchwarzbauerBodenhoferHochreiter11,
  author = {K. Schwarzbauer and U. Bodenhofer and S. Hochreiter},
  title = {Genome-wide chromatin remodeling at {G/C}-rich long
                  nucleosome-free regions containing {SP1} and {MAZ}
                  binding sites},
  booktitle = {19th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology \&\ 10th Europ. Conf. on
                  Computational Biology},
  address = {Vienna},
  month = {June/July},
  year = 2011,
  note = {(poster)}
}
@inproceedings{ChelbatBodenhoferHochreiter11,
  author = {N. Chelbat and U. Bodenhofer and S. Hochreiter},
  title = {Possible sources of wrongly performing probes: from
                  oligonucleotides arrays to {NGS}},
  booktitle = {19th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology \&\ 10th Europ. Conf. on
                  Computational Biology},
  address = {Vienna},
  month = {June/July},
  year = 2011,
  note = {(poster)}
}
@inproceedings{HochreiterBodenhoferHeuselMayrMittereckerKasimKhamiakova11,
  author = {S. Hochreiter and U. Bodenhofer and M. Heusel and
                  A. Mayr and A. Mitterecker and A. Kasim and
                  T. Khamiakova and S. {Van Sanden} and D. Lin and
                  W. Talloen and L. Bijnens and H. W. H. G\"ohlmann
                  and Z. Shkedy and D.-A. Clevert},
  title = {{FABIA:} factor analysis for bicluster acquisition},
  booktitle = {19th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology \&\ 10th Europ. Conf. on
                  Computational Biology},
  address = {Vienna},
  month = {June/July},
  year = 2011,
  note = {(poster)},
  pdf = {http://www.iscb.org/uploaded/css/93/21059.pdf}
}
@inproceedings{HeuselClevertPovysilKlambauerBodenhoferMayrMitterecker12,
  author = {M. Heusel and D.-A. Clevert and G. Povysil and
                  G. Klambauer and U. Bodenhofer and A. Mayr and
                  A. Mitterecker and A. Kasim and T. Khamiakova and
                  S. {Van Sanden} and D. Lin and W. Talloen and
                  H. W. H. G\"ohlmann and L. Bijnens and Z. Shkedy and
                  S. Hochreiter},
  title = {{FABIA:} biclustering in drugdesign},
  booktitle = {20th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology},
  address = {Long Beach, CA},
  month = {July},
  year = 2012,
  note = {(poster)}
}
@inproceedings{KlambauerSchwarzbauerMayrClevertMittereckerBodenhoferHochreiter12b,
  author = {G. Klambauer and K. Schwarzbauer and A. Mayr and
                  D.-A. Clevert and A. Mitterecker and U. Bodenhofer
                  and S. Hochreiter},
  title = {{cn.MOPS:} mixture of {Poissons} for discovering
                  copy number variations in next-generation sequencing
                  data with a low false discovery rate},
  booktitle = {20th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology},
  address = {Long Beach, CA},
  month = {July},
  year = 2012,
  note = {(poster)}
}
@inproceedings{BodenhoferSchwarzbauerHochreiter12,
  author = {U. Bodenhofer and K. Schwarzbauer and S. Hochreiter},
  title = {Genome-wide chromatin remodeling identified at
                  {GC}-rich long nucleosome-free regions},
  booktitle = {20th Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology},
  address = {Long Beach, CA},
  month = {July},
  year = 2012,
  note = {(poster)}
}
@inproceedings{BodenhoferHochreiter12,
  author = {U. Bodenhofer and S. Hochreiter},
  title = {Improving the power of rare-variant association
                  tests by a position-dependent kernel approach},
  booktitle = {13th Int. Meeting on Human Genome Variation and
                  Complex Genome Analysis},
  address = {Shanghai},
  month = {September},
  year = 2012,
  note = {(poster)}
}
@inproceedings{BodenhoferHochreiter12b,
  author = {U. Bodenhofer and S. Hochreiter},
  title = {Associating complex traits with rare variants
                  identified by {NGS}: improving power by a
                  position-dependent kernel approach},
  booktitle = {62nd Annual Meeting of the American Society of Human
                  Genetics},
  address = {San Francisco},
  month = {November},
  year = 2012,
  pdf = {http://www.bioinf.jku.at/publications/2012/ASHG2012_Bodenhofer.pdf}
}
@inproceedings{ClevertHeuselKlambauerMayrMittereckerBodenhoferHochreiter13,
  author = {D.-A. Clevert and M. Heusel and G. Klambauer and
                  A. Mayr and A. Mitterecker and U. Bodenhofer and
                  S. Hochreiter},
  title = {Bicluster analysis in drug discovery},
  booktitle = {21st Annual Int. Conf. on Intelligent Systems for
                  Molecular Biology \&\ 12th Europ. Conf. on
                  Computational Biology},
  address = {Berlin},
  month = {July},
  year = 2013,
  note = {(poster)}
}
@inproceedings{LippJuhaszPaarOgrisEckerstorferThuenauerHesse13,
  author = {A. M. Lipp and K. Juhasz and C. Paar and C. Ogris
                  and P. Eckerstorfer and R. Thuenauer and J. Hesse
                  and H. Stockinger and G. Sch\"utz and U. Bodenhofer
                  and Z. Balogi and A. Sonnleitner},
  title = {{Lck} mediates signal transmission from {CD59} to
                  the {TCR/CD3} pathway in {Jurkat} {T} cells},
  booktitle = {15th Int. Congress on Immunology},
  address = {Milan},
  month = {August},
  year = 2013,
  doi = {10.3389/conf.fimmu.2013.02.01145}
}
@inproceedings{BodenhoferHochreiter13,
  author = {U. Bodenhofer and S. Hochreiter},
  title = {{PODKAT}: a non-burden test for associating complex
                  traits with rare and private variants},
  booktitle = {63rd Annual Meeting of the American Society of Human
                  Genetics},
  address = {Boston},
  month = {October},
  year = 2013,
  note = {(poster)},
  pdf = {http://www.bioinf.jku.at/publications/2013/ASHG2013_Bodenhofer.pdf}
}
@inproceedings{BodenhoferHochreiter14,
  author = {U. Bodenhofer and S. Hochreiter},
  title = {Utilizing Private Variants in Large Genome-Wide
                  Association Studies: Issues, Techniques,
                  Experiences},
  booktitle = {64th Annual Meeting of the American Society of Human
                  Genetics},
  address = {San Diego},
  month = {October},
  year = 2014,
  note = {(poster)},
  pdf = {http://www.bioinf.jku.at/publications/2014/ASHG2014_Bodenhofer.pdf}
}
@inproceedings{BodenhoferHochreiter15,
  author = {U. Bodenhofer and S. Hochreiter},
  title = {{PODKAT}: a software package implementing the
                  position-dependent kernel association test},
  booktitle = {65th Annual Meeting of the American Society of Human
                  Genetics},
  address = {Baltimore},
  month = {October},
  year = 2015,
  note = {(poster)},
  pdf = {http://www.bioinf.jku.at/publications/2015/ASHG2015_Bodenhofer.pdf}
}
@inproceedings{PalmeHochreiterBodenhofer15b,
  author = {J. Palme and S. Hochreiter and U. Bodenhofer},
  title = {{KeBABS}: an {R/Bioconductor} package for
                  kernel-based analysis of biological sequences},
  booktitle = {65th Annual Meeting of the American Society of Human
                  Genetics},
  address = {Baltimore},
  month = {October},
  year = 2015,
  note = {(poster)},
  pdf = {http://www.bioinf.jku.at/publications/2015/ASHG2015_Palme.pdf}
}

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